Rorug04G0299300

At1g04910-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
47391239 .. 47403322
12084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0299300.1

Sequence Viewer

Length: 6441 bp
ATGTCGAAGGAGAGCTCAACGGCACGATTCCCAGCCCGAAACGTTTCGAGGACGCCGCAGCCGGAGCCGAACGAGAACGAGTTCGAAACACCGGCGAATCCAATCCAATTTCCGCCTCCGAGGACGCCTCTGAACAGCATAGCAGATCCAGCGCAATTGCAGAAGGAGTTTCTGGAACTCGATTTGGATTCGCATCCGAAGCTCGAAGCGGTTAGATCCGGTAGGTTTTCTTTATCGGAGAGAAGGCTCGAGACTTTTGATAAAGGTGGAAATGCCGGTCTCAGCTTCGGAACTCCTAGGGTTTCAGGCAGAGGAGGAAAGGCGCACTCGGAGCCTAACTCGGCACAAAGCACTCCGGCGAGAAATCGAGCTTCGATTGGAGGTTGTGCAGTGAGCAGAGCTCCGGTGTACAATGGAGGCAGAGCTGGAAGTTCTTCTAGAATCTCCCGGGAGATTCCGGTGGCCAATTCGGAGATTTTGACTCAAGTACCGCATTTTGAGCTTGCTGAAGACTCGTCGTTTTGGACTGATCACAATGTGCAGGTACTAATTCGAATTCGGCCATTGAGTAGTATGGAGAGGGCTTTGCAAGGGTGTGGTAGGTGTTTGAAGCAGGAGAGCCCACAGACTTTGGTGTTGCATGGTCATCCTGAAGCTAGATTCACATTTGATCATATTGCATGCGAGATGATATCACAGGAAAAGCTGTTCAAGGTTGCAGGAATGCCCATGGTGGAGAATTGCTTGTCTGGTTATAATAGCTGTATGTTCGCCTACGGTCAGACAGGTAGTGGCAAAACGTACACAATGATGGGTGAGATATATGAGATTGAGGGACAACTCAATGACGATTGTGGGATTACTCCACGCATTTTTGAATATTTGTTCAAGAGGATTAGAATGGAAGAGGAGAACAGGAGAGAGGAACAGCTGAAGTATAGCTGCAAATGTTCCTTTCTCGAGATTTACAATGAGCAGATAACAGATCTCTTGGAGCCTTCATCAACTAATCTACAACTCAGGGAGGACTTGAAGAAAGGGGTTTACGTTGAAAACCTTACAGAATACAATGTGACAAATGTTAATGATGTTGTCAAGCTTCTGTTACATGGTGCTTCGAACAGAAAAATGGCAGCTACACACATGAACAGCGAGAGCAGCCGCTCACATAGTGTTTTCACTTGTATCATTGAAAGTCGTTGGGAAAACGATTCCATGACTCATTTTAGATTTGCAAGGTTGAATTTAGTAGATCTAGCTGGTTCAGAGAGGCAGAAAGGCTCTGGTGCAGAGGGAGATCGTTTGAAAGAAGCAGCAAATATAAACAAATCGTTATCAACTCTTGGGTTGGTGATAATGTCTCTAGTTGATTTAGCGCATGGGAAGCAGAGACATGTTCCTTATAGAGATTCGAGGCTTACGTTTCTGCTTCAGGATTCTCTGGGTGGGAACTCTAAAACAACTATAATTGCAAATGTCAGCCCATCTAGTTGTTCTGCAAATGAGACGCTAAGCACTTTGAAGTTTGCCCAGCGTGCGAAACTTATCCAGAACAATGCTAAAGTGAATGAAGATGCTTCAGGTGACATAACTGCCCTTCAGCGACACATCCAACAGCTAAAGGGCCAGTTGTCCTTTCTGATGAAGCATCATAACCTCTCATGGCCTTCATCAAGTTGTGCCCCAAGTATTGAAGAACCTAGACTCGGTGACTTGCCTGAGGAAGACAACTGTATAGGAGAGAAAACGGAAACTGATAGTCATAAGATGTCAAGTGTCCAAAACAAGAAGTTGAAATGCATGGAAGCCACTTTGGTTGGTGCCCTGAGAAGGGAAAAGATGGCAGACAATGCACTACAGAATTTGGTGGCTGAAATTGAACATATGAACCGTTTGGCCTGTGAAAGAGAGGAGGATGCTAGACATACTAAAATAATGCTAAGGTCTCGTGATGAGAAAATTAAAAGACTTGAGTTGTTGGTGGATGGAATGTTGTCTGCCGAGAAGTATCTCATGGAAGAGAACAAAGCTTTGCTAGAAGAGATGCAGATGCTTCAAACAAGACCTGATGGAAATCCAGAATTAGCTCGATATGCTGTGGAGAACAGTAGACTTGTTGAGCAACTTCAATTGTATAAAAAATTTTACGAACACGGAGAGCGAGAAACATTGCTAGCTGAAGTATCAGAATTACGTAATCAGCTTCTGGATATACTTCAAAAAAAGCTTCCATTCTCAACTGAAAATGAAAGTCAGAATAGTGATATCAGAAAGGAATTGGAAGATTGCAGGAACATGAACTCTAAGCTGATTAGGGAAGTAGATGAACTACAATTAGAAATGAGAAAGTACATGAGCTCCAGTCAAGCTGCATCCGACTCTGTCAGAGATTCTTTCTCCAAGGGTGCTGAGGAGTTCAGGCAATCAGATAAATATTCAATGGTGGAAACATTTTCTGTGCGAAGCGACTCTGGAGATGAAATGGCATCTTATACCGAGGCAGATGATGAGGCTTTACAGAATCATGTGATTCATAACCAAAATGGTGATGATAGTCGAAAGAAGTTGATGGATGCTAAAATGTTGACTGAGGCAGGGAAGTCTGAGCAGGCTTGTTTGAAATCACGTGATTTTCGTAAGGAAAGCATGGGTTTGCTGATGGATAGCAGTAAAGATGTTGAGAGGAGAGCTTTACAAGCCAAGTTGGACAAAATGGCTAAGGACCTGGAGGAGGTCAAATCACTTAATAGCCACTTTCAAGAAGATAAGCTATTACAGTTGTCTTGCCAGAAACAAACTGAAATGGTTTGTGAACAGGTTGAGATCGAGACGGCAAGAACAATTCTTCATTTACAGGAAGAGGTTGCTGTCCTTCAGCTTGAACTTGATGAAAAATTACAGGGCATGATTCAGGAAAATACTACATTGAAAAATACCATAGCATCTAAAGAGGATGAAATAAGGACGCTGAAAATGGATTGGGAAAAGGCAACCTTAGAACTAACAAGGTTCCTTCTTGATGGTTCTAGATCCCTCAAAAATGCCTCCAGCCAAATAAAAAGTATCACCCACTCATTTCCTCAAGCTAATGTTTGTATTAGTGAAAATGTTCAGAGGGCTGCCAAAGTTTGCTTGGAAAAGGAAGAAACGATTATATTACTGCAAAAGAGCTTGGAAGATGCACAAAAGATGGTAACAGAAATGGGACAGAAGTTAAGTTCCTTGAAGGGAGCAACAATGGCTTTAAGTGAACTCCAGCATCTGAATAGTGATGAAAAAATGAAGTCTAAAGATCTTCATCACTTGATACATGAAATAAAAAATGAGCTTACTGTAGCAAATGGTAGATTGAAAAATATTGAAGATTTTGTTTACATGTGCCCTTCAGGAGACACAGTTTTAGGAGATGAAGATGAGTGGAGTACTGATAGTTCCATGTCAAGCTGTGATACTTCATCTGAAAGTATTTCTTCTGGACATGTATTGTGGACAATGGAAGGGCATTTAGGGGACCTAAAAGTCGAAGAAGGTCCAGTACTTCAGTCTGCTTATCGAGATCCAGAAAAGTCAAACAAGCTGTTAAAAAATTTCACACAACCTGAAGGAGCAACGTTCTGCCTGAAAAAAGAATTAGAGATAACACTTGATGCTTTTAACACTCTATATGTTCGGTTAGCCTCACTTGTTAGTGAGACTGTCAGTGAAAATCATTCTCAACAAGGAGATGTAAAACAAATTGTTCCACCGTTTAAGCTGAAGACGGAGAGTGCTTATGCAGGTTGTCATACAACAGAAAAGTTAGTTGCTGGTGAGAAAAGTGATTTCGCTAGTAGCTTCTTAATCAACTTTGAAGAAGCGCATGCAACAATAAAAGAGGCTGATTTCATGTTAAATGCCTTGCTGGAAGCCAATGAAAATTCAAAACAATTGACTGGGCTGTGGAAGCAAACTGGTGAGGAACTCATGTTAGAGAGAGCAAGCTTTATTAAAGAAGTGGAACATCTCAAATCTTCAGTACTTTTAAAAGAAAGAGAGAACAAACTGCTGCAAAATCAATCTTATTCTGATTTGGCAGAGATAGAAAAATCAGTGTCTCTTCTTGAAGAGTGTTTCATGCAATTAAAAAGTGATGTCGAGGACAGGTTTAAAGTAATATATGCTGATGTTTTCTCAATGGGGAGTGAGATACGCAACTTTATTAGCAGTTCTAGATCATTCCTAGAAGAAACATGCTCTAAGACATTGGAGAAAGAATTTGCCATGTTTGTGCTTCATCAGTGTCTAAGAGGAGAGCTGGTCCGCAATATGTCATGTGTTGATTTAGATACTGATTATCGGCAATTCAGGAAGCAAGAAGAATGTTCAGAGATGAATAAACTGCATAAGATATGGTCAAGTGGTGAGGAGAGCACCATGCTTATTAGTACCCTCTGCATAGATGATGGGGATCAACGTGAAGTTGTCACCAACTTGAAAGAAAGCGAGTGCGGTCTCTCCCATGATACTTTGATACGTGAGAACTTAGTACTGAAGGAAGAATTGGAAAGGAAGGAAGCTCTACTAGAGGGCGTGCATTTTGATTTTAGAACGTTGCAGGAATCAGCATCCAACACAAAGGATATAAAGGACGAAACTGAAAAGCTGATACAATCTTTGAGCCAAATTCAGCTTGAACTGGAAATGAAAACATGCCACCTTGATGACATGTTGGTTGAACATAGAAAACTTGAGGATCATCTGACTAATACTGAAAAGGCTTTGCTTATATCAAATTCTAATCTTGAGCAGGCCAATGAAACAGTTGAAACTCTTTCAGAGCAAAACATTGAGTTGAAAGTGCTTCTAAAAGATCTCTATCTAAACAAAGTTGAAGCTGAAGAACAACTGGAAGAGCAGAAGGAGGTGGTGAAAGGTTTGGAAAAAGAAATTCTACATTTGAATTCTTCGATGGAAGAAAAAGTACTTTGTTCAGTTGAAGGTATTCAGAGTGATTTGAGAAAGGCTATCAGTGAAAGAGATCGACTCCATGAGGAAGTTCAGTCCTTGAATGATAAACTTGAGATGGCATGTGCAATAGCTGATGAAAACGAAGCTATCTCTGTTGAAGCTCGCCAGGAAGCTGAGACAAGTAAGATGTATGCCAAACAAAAAGAAGAGGAAGTTAAGATCTTAGAACACTCTGTTGAGGAGCTTGAATGCACCATCAATGTACTAGAAAAAAAGGTGTATGAGATGGATGATGAGGTAGAAAGACATCGATTGATCAGAGATGCACTAGAACTGGAACTCCAAGCTTTAAGACAGAGATTGTCAACAGTTGAAAATTTCACTGAAAATGCGGATTCGGAAAACACAAAAGCTGAAGAAGATGAAGACCTGACATCTAGGCAACTTAAGAGTAAGCTACTGGAACTTCATGAGGCTCATAACAGGATAAAGCTTCTTGAAGAGGAAAGAGCAGAATGGGATAAAGAGATCAAACAATGCAAGGAATACATCTCTGAACTTGTGTTGCATGCGGAAGCTCAGGCGTCACAGTACCAACAGAAGTACAAGACTCTTGAGGCCATGGTCTCAGAAGTAAAAGCAGATAAGACATGTTCAACAACCACAGCTGCTACATCAGACAAAACCGAGAGGAGCTCAATCAGGACAAGGGGCTCCGGTTCACCCTTCAGGTGCATATCAACTTTGGTTCAGCAAATGAATATGGAGAAGGATCAGGAATTGTCTACAGCCAGGCTTCGGATTGAGGAACTAGAGGCACTGGCTGCCAGTCGGCAAAAGGAGGTATGTTTGCTGAATACTAGGCTAGCAGCAACAGAAAGCATGACACATGATGTCATTCGAGATTTACTTGGTGTCAAATTGGACATGACTAACTATGCAGACTTGATAGACCAATACCAGGTTCAAAAATTAGTAGAAGAGGCTCATCAGCAGACAGAAGACTTCCTGGCAAAGGAGCAAGAAATTCTCAACTTGAGAAAGCAGATAAATGATCTAATGGAGGAAAGGCAAAGTTGCATATCTGAAATAGAAAAAAAAGAAGGGGATATACTGGCTGCTCAGATGTCTGTGCAAGAACTCCAAGAGAGGGATCAAATGCTTTCTGCACAGAATGAGATGTTGAAGACGGACAAGGCCAATCTAAAGAGGAGAGTATCGGAACTGGATGATATGGTAAAAACAATTCTTGGAACACCAAGTACCCGGCATCCAAGTCAACAAACATCCACGAACAAGAAAAGTGCATTCAGGTTACATGAAGGTGATTTTACCAGAAGACTGGAACAGTCTGAGAAGCATCTCTCTCGTGTCAATGGTGAACTTGCTCAATATATCAAATCAGGTGGTGGTCAGGTGCGAGACAAACGCTTCAGTCACGGGTCAGAACTAGACTATAGGAAGCAGAAGAACTTGAGTCTGGATAGAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

2146

Amino Acids

244.14

Weight (kDa)

5.2

Isoelectric Point (pI)

53.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 185 - 516 1.1e-111 Kinesin motor domain
Microtub_bd PF16796 214 - 331 6.4e-20 Microtubule binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 756
AasI GACNNNNNNGTC 1 cut(s) 3518
Acc36I ACCTGC 2 cut(s) 532, 3767
AccB1I GGYRCC 1 cut(s) 1820
AccBSI CCGCTC 1 cut(s) 1164
AccI GTMKAC 2 cut(s) 2110, 5732
AciI CCGC 9 cut(s) 56, 113, 209, 491, 1162, 4300, 4488, 5339, 5519
AclI AACGTT 3 cut(s) 42, 3611, 4589
AclWI GGATC 8 cut(s) 140, 210, 3024, 3551, 4455, 4740, 5727, 6108
AcoI YGGCCR 2 cut(s) 462, 560
AcvI CACGTG 1 cut(s) 2627
AcyI GRCGYC 3 cut(s) 53, 125, 5531
AdeI CACNNNGTG 2 cut(s) 538, 1172
AfiI CCNNNNNNNGG 8 cut(s) 1706, 1830, 1831, 2731, 5745, 5908, 5962, 6097
AflII CTTAAG 1 cut(s) 5393
AflIII ACRYGT 5 cut(s) 1393, 3375, 3478, 4704, 5597
AjnI CCWGG 5 cut(s) 2724, 5112, 5738, 5907, 5955
AjuI GAANNNNNNNTTGG 4 cut(s) 4523, 4555, 5895, 5927
AloI GAACNNNNNNTCC 4 cut(s) 692, 724, 5271, 5303
Alw21I GWGCWC 5 cut(s) 17, 403, 2360, 4412, 5645
AlwI GGATC 8 cut(s) 140, 210, 3024, 3551, 4455, 4740, 5727, 6108
AlwNI CAGNNNCTG 2 cut(s) 2206, 3262
Ama87I CYCGRG 3 cut(s) 248, 447, 959
AoxI GGCC 8 cut(s) 462, 560, 1624, 1664, 1896, 4788, 5565, 6144
Asp700I GAANNNNTTC 5 cut(s) 43, 80, 433, 3108, 4980
AspA2I CCTAGG 1 cut(s) 296
AspLEI GCGC 4 cut(s) 154, 325, 1378, 3859
AspS9I GGNCC 5 cut(s) 1624, 2722, 3511, 3530, 4297
AsuC2I CCSGG 3 cut(s) 448, 449, 6214
AsuII TTCGAA 3 cut(s) 84, 553, 1118
AsuNHI GCTAGC 2 cut(s) 2173, 5812
AvaI CYCGRG 3 cut(s) 248, 447, 959
AvaII GGWCC 4 cut(s) 2722, 3511, 3530, 4297
AvrII CCTAGG 1 cut(s) 296
AxyI CCTNAGG 1 cut(s) 1719
BaeGI GKGCMC 3 cut(s) 1684, 1825, 3383
BaeI ACNNNNGTAYC 2 cut(s) 471, 504
BalI TGGCCA 1 cut(s) 464
BanI GGYRCC 1 cut(s) 1820
BanII GRGCYC 6 cut(s) 17, 403, 623, 2360, 5645, 5663
BarI GAAGNNNNNNTAC 6 cut(s) 3519, 3551, 4944, 4976, 6042, 6074
BauI CACGAG 2 cut(s) 1947, 6315
BbrPI CACGTG 1 cut(s) 2627
BbsI GAAGAC 7 cut(s) 516, 1731, 3764, 5379, 5955, 6140, 6292
Bbv12I GWGCWC 5 cut(s) 17, 403, 2360, 4412, 5645
BbvCI CCTCAGC 1 cut(s) 2409
BceAI ACGGC 2 cut(s) 36, 2847
BcgI CGANNNNNNTGC 2 cut(s) 6296, 6330
BciT130I CCWGG 5 cut(s) 2726, 5114, 5740, 5909, 5957
BclI TGATCA 3 cut(s) 529, 670, 5262
BcnI CCSGG 3 cut(s) 448, 449, 6214
BfmI CTRYAG 4 cut(s) 1856, 3333, 5733, 6403
BfrI CTTAAG 1 cut(s) 5393
BfuAI ACCTGC 2 cut(s) 532, 3767
BglII AGATCT 5 cut(s) 985, 1252, 3292, 4849, 5166
BlnI CCTAGG 1 cut(s) 296
BlpI GCTNAGC 1 cut(s) 1511
BmcAI AGTACT 5 cut(s) 3424, 3537, 4017, 4527, 4962
Bme1390I CCNGG 8 cut(s) 448, 449, 2726, 5114, 5740, 5909, 5957, 6214
Bme18I GGWCC 4 cut(s) 2722, 3511, 3530, 4297
BmeT110I CYCGRG 3 cut(s) 248, 447, 959
BmgT120I GGNCC 5 cut(s) 1624, 2722, 3511, 3530, 4297
BmiI GGNNCC 7 cut(s) 66, 333, 996, 1822, 3011, 3512, 5662
BmrFI CCNGG 8 cut(s) 448, 449, 2726, 5114, 5740, 5909, 5957, 6214
BmrI ACTGGG 1 cut(s) 3942
BmtI GCTAGC 2 cut(s) 2177, 5816
BmuI ACTGGG 1 cut(s) 3942
BpiI GAAGAC 7 cut(s) 516, 1731, 3764, 5379, 5955, 6140, 6292
BpmI CTGGAG 5 cut(s) 2344, 2493, 2747, 3031, 3239
Bpu10I CCTNAGC 4 cut(s) 1940, 2409, 2718, 5526
Bpu1102I GCTNAGC 1 cut(s) 1511
Bpu14I TTCGAA 3 cut(s) 84, 553, 1118
BpuEI CTTGAG 8 cut(s) 468, 1991, 3066, 4748, 4802, 5078, 5582, 6004
BpuMI CCSGG 3 cut(s) 448, 449, 6214
Bsa29I ATCGAT 1 cut(s) 5257
BsaAI YACGTR 3 cut(s) 2195, 2627, 4514
BsaBI GATNNNNATC 5 cut(s) 192, 2073, 3297, 4446, 4854
BsaHI GRCGYC 3 cut(s) 53, 125, 5531
BsaI GGTCTC 4 cut(s) 284, 1950, 4496, 5578
BsaJI CCNNGG 7 cut(s) 119, 296, 447, 729, 2400, 2496, 5568
BsaWI WCCGGW 4 cut(s) 218, 403, 457, 5663
BsaXI ACNNNNNCTCC 8 cut(s) 2342, 2372, 3381, 3411, 4281, 4311, 5271, 5301
Bsc4I CCNNNNNNNGG 8 cut(s) 1706, 1830, 1831, 2731, 5745, 5908, 5962, 6097
Bse118I RCCGGY 2 cut(s) 91, 275
Bse21I CCTNAGG 1 cut(s) 1719
Bse3DI GCAATG 1 cut(s) 2168
Bse8I GATNNNNATC 5 cut(s) 192, 2073, 3297, 4446, 4854
BseBI CCWGG 5 cut(s) 2726, 5114, 5740, 5909, 5957
BseCI ATCGAT 1 cut(s) 5257
BseDI CCNNGG 7 cut(s) 119, 296, 447, 729, 2400, 2496, 5568
BseJI GATNNNNATC 5 cut(s) 192, 2073, 3297, 4446, 4854
BseLI CCNNNNNNNGG 8 cut(s) 1706, 1830, 1831, 2731, 5745, 5908, 5962, 6097
BseMI GCAATG 1 cut(s) 2168
BseSI GKGCMC 3 cut(s) 1684, 1825, 3383
BseYI CCCAGC 2 cut(s) 31, 1530
BsgI GTGCAG 4 cut(s) 408, 560, 1308, 6099
BshFI GGCC 8 cut(s) 464, 562, 1626, 1666, 1898, 4790, 5567, 6146
BshNI GGYRCC 1 cut(s) 1820
BshVI ATCGAT 1 cut(s) 5257
BsiHKAI GWGCWC 5 cut(s) 17, 403, 2360, 4412, 5645
BsiHKCI CYCGRG 3 cut(s) 248, 447, 959
BslFI GGGAC 3 cut(s) 849, 3219, 3524
BslI CCNNNNNNNGG 8 cut(s) 1706, 1830, 1831, 2731, 5745, 5908, 5962, 6097
BsmBI CGTCTC 2 cut(s) 1499, 2822
BsmFI GGGAC 3 cut(s) 849, 3219, 3524
BsmI GAATGC 3 cut(s) 729, 5201, 6254
BsnI GGCC 8 cut(s) 464, 562, 1626, 1666, 1898, 4790, 5567, 6146
Bso31I GGTCTC 4 cut(s) 284, 1950, 4496, 5578
BsoBI CYCGRG 3 cut(s) 248, 447, 959
Bsp119I TTCGAA 3 cut(s) 84, 553, 1118
Bsp1407I TGTACA 1 cut(s) 408
Bsp1720I GCTNAGC 1 cut(s) 1511
Bsp19I CCATGG 2 cut(s) 729, 5568
BspACI CCGC 9 cut(s) 56, 113, 209, 491, 1162, 4300, 4488, 5339, 5519
BspANI GGCC 8 cut(s) 464, 562, 1626, 1666, 1898, 4790, 5567, 6146
BspDI ATCGAT 1 cut(s) 5257
BspHI TCATGA 1 cut(s) 5416
BspLI GGNNCC 7 cut(s) 66, 333, 996, 1822, 3011, 3512, 5662
BspMI ACCTGC 2 cut(s) 532, 3767
BspOI GCTAGC 2 cut(s) 2177, 5816
BspPI GGATC 8 cut(s) 140, 210, 3024, 3551, 4455, 4740, 5727, 6108
BspQI GCTCTTC 1 cut(s) 4884
BspT104I TTCGAA 3 cut(s) 84, 553, 1118
BspT107I GGYRCC 1 cut(s) 1820
BspTI CTTAAG 1 cut(s) 5393
BspTNI GGTCTC 4 cut(s) 284, 1950, 4496, 5578
BsrBI CCGCTC 1 cut(s) 1164
BsrDI GCAATG 1 cut(s) 2168
BsrFI RCCGGY 2 cut(s) 91, 275
BsrGI TGTACA 1 cut(s) 408
BssAI RCCGGY 2 cut(s) 91, 275
BssECI CCNNGG 7 cut(s) 119, 296, 447, 729, 2400, 2496, 5568
BssNI GRCGYC 3 cut(s) 53, 125, 5531
BssSI CACGAG 2 cut(s) 1947, 6315
BssT1I CCWWGG 4 cut(s) 296, 729, 2400, 5568
Bst2BI CACGAG 2 cut(s) 1947, 6315
Bst2UI CCWGG 5 cut(s) 2726, 5114, 5740, 5909, 5957
BstACI GRCGYC 3 cut(s) 53, 125, 5531
BstAFI CTTAAG 1 cut(s) 5393
BstAPI GCANNNNNTGC 2 cut(s) 1850, 5771
BstAUI TGTACA 1 cut(s) 408
BstBAI YACGTR 3 cut(s) 2195, 2627, 4514
BstBI TTCGAA 3 cut(s) 84, 553, 1118
BstDSI CCRYGG 2 cut(s) 729, 5568
BstENI CCTNNNNNAGG 2 cut(s) 2729, 5960
BstHHI GCGC 4 cut(s) 154, 325, 1378, 3859
BstNI CCWGG 5 cut(s) 2726, 5114, 5740, 5909, 5957
BstSCI CCNGG 8 cut(s) 446, 447, 2724, 5112, 5738, 5907, 5955, 6212
BstSFI CTRYAG 4 cut(s) 1856, 3333, 5733, 6403
BstSLI GKGCMC 3 cut(s) 1684, 1825, 3383
BstSNI TACGTA 1 cut(s) 2195
BstV2I GAAGAC 7 cut(s) 516, 1731, 3764, 5379, 5955, 6140, 6292
BstX2I RGATCY 9 cut(s) 145, 215, 985, 1252, 3029, 3292, 3556, 4849, 5166
BstXI CCANNNNNNTGG 1 cut(s) 6289
BstYI RGATCY 9 cut(s) 145, 215, 985, 1252, 3029, 3292, 3556, 4849, 5166
Bsu15I ATCGAT 1 cut(s) 5257
Bsu36I CCTNAGG 1 cut(s) 1719
BsuRI GGCC 8 cut(s) 464, 562, 1626, 1666, 1898, 4790, 5567, 6146
BsuTUI ATCGAT 1 cut(s) 5257
BtgI CCRYGG 2 cut(s) 729, 5568
BtsI GCAGTG 1 cut(s) 396
BtsIMutI CAGTG 7 cut(s) 396, 3706, 4095, 4283, 5014, 5328, 5765
BveI ACCTGC 2 cut(s) 532, 3767
CaiI CAGNNNCTG 2 cut(s) 2206, 3262
CciI TCATGA 1 cut(s) 5416
CfoI GCGC 4 cut(s) 154, 325, 1378, 3859
Cfr10I RCCGGY 2 cut(s) 91, 275
Cfr13I GGNCC 5 cut(s) 1624, 2722, 3511, 3530, 4297
Cfr9I CCCGGG 1 cut(s) 447
ClaI ATCGAT 1 cut(s) 5257
CseI GACGC 5 cut(s) 61, 133, 1516, 2974, 5520
CsiI ACCWGGT 1 cut(s) 5907
CspCI CAANNNNNGTGG 6 cut(s) 612, 647, 1798, 1833, 6334, 6369
DraI TTTAAA 2 cut(s) 4023, 4147
DraIII CACNNNGTG 2 cut(s) 538, 1172
DrdI GACNNNNNNGTC 1 cut(s) 3518
DseDI GACNNNNNNGTC 1 cut(s) 3518
EaeI YGGCCR 2 cut(s) 462, 560
EciI GGCGGA 1 cut(s) 102
Ecl136II GAGCTC 4 cut(s) 15, 401, 2358, 5643
Eco105I TACGTA 1 cut(s) 2195
Eco130I CCWWGG 4 cut(s) 296, 729, 2400, 5568
Eco24I GRGCYC 6 cut(s) 17, 403, 623, 2360, 5645, 5663
Eco31I GGTCTC 4 cut(s) 284, 1950, 4496, 5578
Eco32I GATATC 2 cut(s) 693, 2266
Eco47I GGWCC 4 cut(s) 2722, 3511, 3530, 4297
Eco53kI GAGCTC 4 cut(s) 15, 401, 2358, 5643
Eco72I CACGTG 1 cut(s) 2627
Eco81I CCTNAGG 1 cut(s) 1719
Eco88I CYCGRG 3 cut(s) 248, 447, 959
EcoICRI GAGCTC 4 cut(s) 15, 401, 2358, 5643
EcoNI CCTNNNNNAGG 2 cut(s) 2729, 5960
EcoO109I RGGNCCY 2 cut(s) 2722, 3511
EcoRI GAATTC 2 cut(s) 555, 4939
EcoRII CCWGG 5 cut(s) 2724, 5112, 5738, 5907, 5955
EcoRV GATATC 2 cut(s) 693, 2266
EcoT14I CCWWGG 4 cut(s) 296, 729, 2400, 5568
EcoT22I ATGCAT 1 cut(s) 1802
EcoT38I GRGCYC 6 cut(s) 17, 403, 623, 2360, 5645, 5663
ErhI CCWWGG 4 cut(s) 296, 729, 2400, 5568
Esp3I CGTCTC 2 cut(s) 1499, 2822
FalI AAGNNNNNCTT 4 cut(s) 2978, 3010, 3454, 3486
FaqI GGGAC 3 cut(s) 849, 3219, 3524
FauNDI CATATG 1 cut(s) 1884
FbaI TGATCA 3 cut(s) 529, 670, 5262
FblI GTMKAC 2 cut(s) 2110, 5732
FriOI GRGCYC 6 cut(s) 17, 403, 623, 2360, 5645, 5663
GlaI GCGC 4 cut(s) 153, 324, 1377, 3858
GsaI CCCAGC 2 cut(s) 35, 1534
GsuI CTGGAG 5 cut(s) 2344, 2493, 2747, 3031, 3239
HaeIII GGCC 8 cut(s) 464, 562, 1626, 1666, 1898, 4790, 5567, 6146
HgaI GACGC 5 cut(s) 61, 133, 1516, 2974, 5520
HhaI GCGC 4 cut(s) 154, 325, 1378, 3859
Hin1I GRCGYC 3 cut(s) 53, 125, 5531
Hin6I GCGC 4 cut(s) 152, 323, 1376, 3857
HinP1I GCGC 4 cut(s) 152, 323, 1376, 3857
HincII GTYRAC 3 cut(s) 2586, 5313, 6227
HindII GTYRAC 3 cut(s) 2586, 5313, 6227
HindIII AAGCTT 6 cut(s) 1097, 2028, 2225, 3979, 5292, 5438
Hpy99I CGWCG 1 cut(s) 520
Hsp92I GRCGYC 3 cut(s) 53, 125, 5531
HspAI GCGC 4 cut(s) 152, 323, 1376, 3857
Ksp22I TGATCA 3 cut(s) 529, 670, 5262
LguI GCTCTTC 1 cut(s) 4884
MabI ACCWGGT 1 cut(s) 5907
MaeIII GTNAC 9 cut(s) 1072, 1104, 1583, 1709, 3193, 4462, 5532, 6261, 6383
MbiI CCGCTC 1 cut(s) 1164
MfeI CAATTG 3 cut(s) 155, 2129, 3926
MflI RGATCY 9 cut(s) 145, 215, 985, 1252, 3029, 3292, 3556, 4849, 5166
MlsI TGGCCA 1 cut(s) 464
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 9 cut(s) 475, 506, 1213, 1698, 2372, 2462, 5016, 5551, 6433
MmeI TCCRAC 4 cut(s) 1636, 2400, 2685, 4632
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 1 cut(s) 1802
MroXI GAANNNNTTC 5 cut(s) 43, 80, 433, 3108, 4980
MscI TGGCCA 1 cut(s) 464
MslI CAYNNNNRTG 4 cut(s) 809, 4265, 4698, 6270
Msp20I TGGCCA 1 cut(s) 464
MspA1I CMGCKG 2 cut(s) 931, 5615
MspCI CTTAAG 1 cut(s) 5393
MspR9I CCNGG 8 cut(s) 448, 449, 2726, 5114, 5740, 5909, 5957, 6214
MunI CAATTG 3 cut(s) 155, 2129, 3926
Mva1269I GAATGC 3 cut(s) 729, 5201, 6254
MvaI CCWGG 5 cut(s) 2726, 5114, 5740, 5909, 5957
NciI CCSGG 3 cut(s) 448, 449, 6214
NcoI CCATGG 2 cut(s) 729, 5568
NdeI CATATG 1 cut(s) 1884
NheI GCTAGC 2 cut(s) 2173, 5812
NlaIV GGNNCC 7 cut(s) 66, 333, 996, 1822, 3011, 3512, 5662
NmeAIII GCCGAG 2 cut(s) 320, 2026
NmuCI GTSAC 6 cut(s) 1072, 1583, 1709, 4462, 5532, 6383
NsiI ATGCAT 1 cut(s) 1802
NspV TTCGAA 3 cut(s) 84, 553, 1118
PaeI GCATGC 3 cut(s) 684, 3863, 5519
PaeR7I CTCGAG 2 cut(s) 248, 959
PagI TCATGA 1 cut(s) 5416
PciI ACATGT 5 cut(s) 1393, 3375, 3478, 4704, 5597
PciSI GCTCTTC 1 cut(s) 4884
PcsI WCGNNNNNNNCGW 2 cut(s) 1418, 2632
PctI GAATGC 3 cut(s) 729, 5201, 6254
PdmI GAANNNNTTC 5 cut(s) 43, 80, 433, 3108, 4980
PflFI GACNNNGTC 1 cut(s) 2381
PleI GAGTC 9 cut(s) 475, 506, 1213, 1698, 2372, 2462, 5016, 5551, 6432
PmaCI CACGTG 1 cut(s) 2627
PmlI CACGTG 1 cut(s) 2627
PpsI GAGTC 9 cut(s) 475, 506, 1213, 1698, 2372, 2462, 5016, 5551, 6432
Ppu21I YACGTR 3 cut(s) 2195, 2627, 4514
PpuMI RGGWCCY 2 cut(s) 2722, 3511
PscI ACATGT 5 cut(s) 1393, 3375, 3478, 4704, 5597
PsiI TTATAA 1 cut(s) 756
Psp124BI GAGCTC 4 cut(s) 17, 403, 2360, 5645
Psp1406I AACGTT 3 cut(s) 42, 3611, 4589
Psp5II RGGWCCY 2 cut(s) 2722, 3511
Psp6I CCWGG 5 cut(s) 2724, 5112, 5738, 5907, 5955
PspCI CACGTG 1 cut(s) 2627
PspFI CCCAGC 2 cut(s) 31, 1530
PspGI CCWGG 5 cut(s) 2724, 5112, 5738, 5907, 5955
PspN4I GGNNCC 7 cut(s) 66, 333, 996, 1822, 3011, 3512, 5662
PspPI GGNCC 5 cut(s) 1624, 2722, 3511, 3530, 4297
PspPPI RGGWCCY 2 cut(s) 2722, 3511
PsrI GAACNNNNNNTAC 4 cut(s) 3415, 3447, 6193, 6225
PstNI CAGNNNCTG 2 cut(s) 2206, 3262
PsuI RGATCY 9 cut(s) 145, 215, 985, 1252, 3029, 3292, 3556, 4849, 5166
PsyI GACNNNGTC 1 cut(s) 2381
PvuII CAGCTG 2 cut(s) 931, 5615
RseI CAYNNNNRTG 4 cut(s) 809, 4265, 4698, 6270
SacI GAGCTC 4 cut(s) 17, 403, 2360, 5645
SapI GCTCTTC 1 cut(s) 4884
Sau96I GGNCC 5 cut(s) 1624, 2722, 3511, 3530, 4297
ScaI AGTACT 5 cut(s) 3424, 3537, 4017, 4527, 4962
SchI GAGTC 9 cut(s) 475, 506, 1213, 1698, 2372, 2462, 5016, 5551, 6433
ScrFI CCNGG 8 cut(s) 448, 449, 2726, 5114, 5740, 5909, 5957, 6214
SexAI ACCWGGT 1 cut(s) 5907
SfcI CTRYAG 4 cut(s) 1856, 3333, 5733, 6403
Sfr274I CTCGAG 2 cut(s) 248, 959
SfuI TTCGAA 3 cut(s) 84, 553, 1118
SgrAI CRCCGGYG 1 cut(s) 91
SinI GGWCC 4 cut(s) 2722, 3511, 3530, 4297
SlaI CTCGAG 2 cut(s) 248, 959
SmaI CCCGGG 1 cut(s) 449
SmiMI CAYNNNNRTG 4 cut(s) 809, 4265, 4698, 6270
SnaBI TACGTA 1 cut(s) 2195
SphI GCATGC 3 cut(s) 684, 3863, 5519
SsiI CCGC 9 cut(s) 56, 113, 209, 491, 1162, 4300, 4488, 5339, 5519
SspI AATATT 3 cut(s) 881, 2435, 3358
SstI GAGCTC 4 cut(s) 17, 403, 2360, 5645
StyD4I CCNGG 8 cut(s) 446, 447, 2724, 5112, 5738, 5907, 5955, 6212
StyI CCWWGG 4 cut(s) 296, 729, 2400, 5568
TatI WGTACW 9 cut(s) 408, 2349, 3422, 3535, 4015, 4525, 4960, 5209, 5550
TauI GCSGC 2 cut(s) 58, 1164
TscAI CASTG 7 cut(s) 396, 3706, 4095, 4283, 5014, 5335, 5772
TseFI GTSAC 6 cut(s) 1072, 1583, 1709, 4462, 5532, 6383
Tsp45I GTSAC 6 cut(s) 1072, 1583, 1709, 4462, 5532, 6383
TspGWI ACGGA 4 cut(s) 1763, 2169, 3776, 6152
TspMI CCCGGG 1 cut(s) 447
TspRI CASTG 7 cut(s) 396, 3706, 4095, 4283, 5014, 5335, 5772
Tth111I GACNNNGTC 1 cut(s) 2381
Vha464I CTTAAG 1 cut(s) 5393
VpaK11BI GGWCC 4 cut(s) 2722, 3511, 3530, 4297
XagI CCTNNNNNAGG 2 cut(s) 2729, 5960
XbaI TCTAGA 3 cut(s) 437, 3026, 4208
XcmI CCANNNNNNNNNTGG 1 cut(s) 3130
XhoI CTCGAG 2 cut(s) 248, 959
XmaI CCCGGG 1 cut(s) 447
XmaJI CCTAGG 1 cut(s) 296
XmiI GTMKAC 2 cut(s) 2110, 5732
XmnI GAANNNNTTC 5 cut(s) 43, 80, 433, 3108, 4980
ZrmI AGTACT 5 cut(s) 3424, 3537, 4017, 4527, 4962
Zsp2I ATGCAT 1 cut(s) 1802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.