Rorug04G0315700

Protein UXT homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0008665
Physical Location & Seq
Forward (+)
49027864 .. 49030164
2301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0315700.1

Sequence Viewer

Length: 2301 bp
ATGTCTTCTTCTTCTTCTTTCATCACAGTGCAATGTTCTCTGCTACCTTCTTGCTCCTCAAGTCATCATCATCCCCCTATAAAAGCTGTAAACTTTGCTCAGATTCCATCATGGGTCTCTCTAAAATCCTCTGCTCCATTGTTGGATACCCAACAATTACAGACTGGGCAAGTCGAAAATGTTCACTTGGTTTCTTTATCGAAACAGGGGAAGATGAAAGAAGCACGAGAATTTCTACAGCAAATGAAGAAGGCTGGTGTGGCGGTTAGTGCTCAGTCGTATAGGTGTTTGTTTGAAAAGTGTGGATTGATGGGTTCGTTATCGGATGGCAGATTTGTTCACGAGTGGTTGCGAACAACTGTGAAGAGTCCAGCGGAGTTTCTTGAGAATGATGCTCTTCAGATGTACTGCGATTGTGGGAGTTTAAGGGATGCACAGAAGGTGTTCGATGAAATGCTTCACAGGGATTTGGTTTCTTGGGTTATAATCATATCCGCTTATGTGGACAAGGGTGTTTTGAACAAAGCTGTTGCTCTGTTTTTGGATATGCTGGAGTCTGGGGTTAGGCCGAATTCGTCTATTTTTTTTACTAGCTTGTTGAAGTCGTTGAATGAGTTTTCGCATTTGGAGTTTGGGAAACAGATGCACTCTTATGTTATAAGAACTGGGAATGCTAGTGGTTCGGTTGAGACGGCGATTGCAAACATGTATGTCAAGTGTGGATGGTTAGATGGTGCTAAACTAGTGTTTGATAAGATGGGTGACAAGAAGAGTGTGGTAGCTTGGACTGGGTTGATGGTGGGGTATACTGAAGATGAGAAGCTGGGGGAGGTTTTAGAATTGTTTGCTGAGATGGTTAGGGGAAGTGTAGAGGTGGATGATTTTGTTTTTTCGATAGTTCTCAAGGCATGTGCAGGTTTGGAGTACTTGAATGCTGGAAGGCACATCCATGGTTACAGTGTTAAACTTGGATTGGATTCTGAGGTCTCTGTAGGAACTCCTCTTGTGGACTTCTATGTCAAATGTGGAGAATTTGACTCTGCTCGGCGAGCATTTAAGAGGATAAATGAACCAAATGATGTTTCGTGGAGTGCTATAATCTCTGGCTATTGCCAGAACGGTGAATTTGAGGAGTCTCTCGAGATTTTTCAATCTTTAATTGGTAAAGGTGTTACTTTAAATCCATTCATCTATACAAGCATTTTTCAAGCATGCTCTGCAATTGCAGACATAAATTTGGGAGCTCAAGTTCATGCGGATGCAATAAAAAGAGGGTTTGTCGCATTCTTGTATGGAGCAAGTGCAATGATTACGATGTACTCAAAATGTGGCAGATTGGACTATGCCTATCAAGCATTTGAATCGATAGATAAACCTGATACCGTGGCCTGGACTGCTATAATTTGTGGCTATGCATATCATGGCAATGCCTCTGAAGCTCTTCGGCTTTTCAGTAGAATGCAGAACTCTGGCATAAAGCCAAATTCAGTTACATTTGTAGCAGTTCTAACTGCTTGCAGCCATTCAGGTTTGGTAACAGAGGCCAAGCAGTATTTGGATTCAATGAGTAGTGTATATAATGTGGAACCAACCATTGATCATTACGATTGTATGATAGATGTGTACGCTCGTGCTGGACTACTACAGGAGGCACTTGAACTGATAAAGACTATGCCATTTGAGCCCGATGCAATGAGCTGGAAAAGCTTATTGGGTGGATGTTGGATAAATCGAAATCTTGAGCTCGGAAAGTTTGCAGCTGAAAACCTCCTCCAGATGGACCCAGAGGACACTGCTAGTTACATAATCATGTTCAACTTGTATGCATCATCGGGAAAATGGGAAGAAGCCGCCCGTTTTCGAAAAATGATGGCCGAAAAAAACTTGAGGAAAGAAATAGGTTGCAGCTGGATCACTGTCCAGGGCAAAACACACCGGTTTATAGTTGGCGATAAGCACCATTCTCAAATAGACCAGATATACTCAAAGCTAAATGAGCTAAGCATTTCTTTCAAGGATGCTGAAGATTCACTTCTAACTGAGGAGGATGTACTCTCTGGTTTTCCTGAAAGGAAAGAACAGCTTCTTGACCATAGTGAGAGACTTGCTATAGCATTTGGGCTCATTTCCACACCAAGTAATGCCCCTATTATGGTCTTTAAGAACATCAGGGCCTGCAAAGACTGTCATGAGTTTGCAAAGCATGTTTCCATGGTGACAAGGCGTGTAATTATTGTGAGAGACTCCAACAGATTCCATCACTTTAAGTCGGGCGAGTGTTCTTGCAGAGATTATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Prefoldin

Protein Analysis

766

Amino Acids

85.56

Weight (kDa)

6.02

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 156 - 192 1.5e-06 PPR repeat family
PPR_2 PF13041 258 - 305 8.4e-08 PPR repeat family
PPR_2 PF13041 358 - 405 1.6e-07 PPR repeat family
PPR PF01535 361 - 391 1.7e-07 PPR repeat
PPR_3 PF13812 458 - 506 4.6e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 459 - 507 3.4e-13 PPR repeat family
PPR PF01535 462 - 492 2.6e-06 PPR repeat
E_motif PF20431 579 - 638 5.2e-16 E motif
DYW_deaminase PF14432 690 - 766 2.4e-31 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 485, 659
AasI GACNNNNNNGTC 1 cut(s) 1016
Acc36I ACCTGC 1 cut(s) 905
AccI GTMKAC 1 cut(s) 806
AciI CCGC 5 cut(s) 263, 374, 495, 1256, 1851
AclWI GGATC 1 cut(s) 1919
AcoI YGGCCR 1 cut(s) 1872
AcsI RAATTY 6 cut(s) 230, 571, 1031, 1124, 1234, 1483
AcuI CTGAAG 4 cut(s) 383, 831, 1455, 2043
AfaI GTAC 5 cut(s) 407, 926, 1319, 1625, 2052
AfiI CCNNNNNNNGG 3 cut(s) 1389, 1777, 2152
AflIII ACRYGT 1 cut(s) 705
AgeI ACCGGT 1 cut(s) 1935
AhlI ACTAGT 1 cut(s) 742
AjnI CCWGG 2 cut(s) 1388, 1920
AjuI GAANNNNNNNTTGG 4 cut(s) 1066, 1098, 1694, 1726
AloI GAACNNNNNNTCC 2 cut(s) 1233, 1265
Alw21I GWGCWC 3 cut(s) 274, 1246, 1746
Alw26I GTCTC 6 cut(s) 121, 683, 991, 1140, 2095, 2235
AlwI GGATC 1 cut(s) 1919
AlwNI CAGNNNCTG 1 cut(s) 2175
Ama87I CYCGRG 1 cut(s) 1139
AoxI GGCC 5 cut(s) 566, 1386, 1542, 1872, 2172
ApeKI GCWGC 3 cut(s) 1518, 1757, 1905
ApoI RAATTY 6 cut(s) 230, 571, 1031, 1124, 1234, 1483
AsiGI ACCGGT 1 cut(s) 1935
Asp700I GAANNNNTTC 5 cut(s) 180, 443, 456, 1440, 2082
AspS9I GGNCC 2 cut(s) 1780, 2172
AsuHPI GGTGA 3 cut(s) 773, 1133, 2227
AsuII TTCGAA 1 cut(s) 1861
AvaI CYCGRG 1 cut(s) 1139
AvaII GGWCC 1 cut(s) 1780
BanII GRGCYC 4 cut(s) 1246, 1686, 1746, 2124
BauI CACGAG 3 cut(s) 225, 341, 1629
Bbv12I GWGCWC 3 cut(s) 274, 1246, 1746
BbvI GCAGC 3 cut(s) 1530, 1769, 1917
BceAI ACGGC 1 cut(s) 708
BcgI CGANNNNNNTGC 2 cut(s) 1344, 1378
BciT130I CCWGG 2 cut(s) 1390, 1922
BciVI GTATCC 1 cut(s) 139
BclI TGATCA 1 cut(s) 1597
BcoDI GTCTC 6 cut(s) 121, 683, 991, 1140, 2095, 2235
BcuI ACTAGT 1 cut(s) 742
BfaI CTAG 4 cut(s) 591, 675, 743, 1797
BfmI CTRYAG 4 cut(s) 236, 990, 1643, 2109
BfuAI ACCTGC 1 cut(s) 905
BfuI GTATCC 1 cut(s) 139
BisI GCNGC 4 cut(s) 1519, 1758, 1851, 1906
BlpI GCTNAGC 1 cut(s) 2000
BlsI GCNGC 4 cut(s) 1520, 1759, 1852, 1907
BmcAI AGTACT 1 cut(s) 926
Bme1390I CCNGG 2 cut(s) 1390, 1922
Bme18I GGWCC 1 cut(s) 1780
BmeT110I CYCGRG 1 cut(s) 1139
BmgT120I GGNCC 2 cut(s) 1780, 2172
BmiI GGNNCC 2 cut(s) 1587, 1782
BmrFI CCNGG 2 cut(s) 1390, 1922
BmrI ACTGGG 3 cut(s) 174, 675, 798
BmsI GCATC 7 cut(s) 382, 421, 633, 1249, 1678, 1835, 2008
BmuI ACTGGG 3 cut(s) 174, 675, 798
BpmI CTGGAG 2 cut(s) 572, 1757
Bpu1102I GCTNAGC 1 cut(s) 2000
Bpu14I TTCGAA 1 cut(s) 1861
BpuEI CTTGAG 6 cut(s) 43, 404, 887, 1230, 1760, 1906
Bsa29I ATCGAT 1 cut(s) 1364
BsaI GGTCTC 2 cut(s) 121, 991
BsaJI CCNNGG 4 cut(s) 949, 1383, 1921, 2211
BsaWI WCCGGW 1 cut(s) 1935
BsaXI ACNNNNNCTCC 2 cut(s) 1233, 1263
Bsc4I CCNNNNNNNGG 3 cut(s) 1389, 1777, 2152
Bse118I RCCGGY 1 cut(s) 1935
Bse1I ACTGG 3 cut(s) 169, 670, 793
Bse3DI GCAATG 4 cut(s) 38, 1311, 1432, 1698
BseBI CCWGG 2 cut(s) 1390, 1922
BseCI ATCGAT 1 cut(s) 1364
BseDI CCNNGG 4 cut(s) 949, 1383, 1921, 2211
BseLI CCNNNNNNNGG 3 cut(s) 1389, 1777, 2152
BseMI GCAATG 4 cut(s) 38, 1311, 1432, 1698
BseMII CTCAG 5 cut(s) 113, 287, 840, 972, 2031
BseNI ACTGG 3 cut(s) 169, 670, 793
BseRI GAGGAG 5 cut(s) 46, 990, 1145, 1760, 2057
BseXI GCAGC 3 cut(s) 1530, 1769, 1917
BseYI CCCAGC 1 cut(s) 823
BsgI GTGCAG 1 cut(s) 933
BshFI GGCC 5 cut(s) 568, 1388, 1544, 1874, 2174
BshTI ACCGGT 1 cut(s) 1935
BshVI ATCGAT 1 cut(s) 1364
BsiHKAI GWGCWC 3 cut(s) 274, 1246, 1746
BsiHKCI CYCGRG 1 cut(s) 1139
BsiSI CCGG 1 cut(s) 1936
BslI CCNNNNNNNGG 3 cut(s) 1389, 1777, 2152
BsmAI GTCTC 6 cut(s) 121, 683, 991, 1140, 2095, 2235
BsmBI CGTCTC 1 cut(s) 683
BsmI GAATGC 4 cut(s) 676, 937, 1283, 1464
BsnI GGCC 5 cut(s) 568, 1388, 1544, 1874, 2174
Bso31I GGTCTC 2 cut(s) 121, 991
BsoBI CYCGRG 1 cut(s) 1139
Bsp119I TTCGAA 1 cut(s) 1861
Bsp1286I GDGCHC 5 cut(s) 274, 1246, 1686, 1746, 2124
Bsp143I GATC 2 cut(s) 1597, 1911
Bsp1720I GCTNAGC 1 cut(s) 2000
Bsp19I CCATGG 2 cut(s) 949, 2211
BspACI CCGC 5 cut(s) 263, 374, 495, 1256, 1851
BspANI GGCC 5 cut(s) 568, 1388, 1544, 1874, 2174
BspCNI CTCAG 5 cut(s) 112, 286, 841, 973, 2032
BspDI ATCGAT 1 cut(s) 1364
BspHI TCATGA 1 cut(s) 2188
BspLI GGNNCC 2 cut(s) 1587, 1782
BspMI ACCTGC 1 cut(s) 905
BspPI GGATC 1 cut(s) 1919
BspQI GCTCTTC 2 cut(s) 402, 1446
BspT104I TTCGAA 1 cut(s) 1861
BspTNI GGTCTC 2 cut(s) 121, 991
BsrDI GCAATG 4 cut(s) 38, 1311, 1432, 1698
BsrFI RCCGGY 1 cut(s) 1935
BsrI ACTGG 3 cut(s) 169, 670, 793
BssAI RCCGGY 1 cut(s) 1935
BssECI CCNNGG 4 cut(s) 949, 1383, 1921, 2211
BssMI GATC 2 cut(s) 1597, 1911
BssNAI GTATAC 1 cut(s) 807
BssSI CACGAG 3 cut(s) 225, 341, 1629
BssT1I CCWWGG 2 cut(s) 949, 2211
Bst1107I GTATAC 1 cut(s) 807
Bst2BI CACGAG 3 cut(s) 225, 341, 1629
Bst2UI CCWGG 2 cut(s) 1390, 1922
Bst4CI ACNGT 7 cut(s) 28, 361, 959, 1121, 1384, 1918, 2186
Bst6I CTCTTC 4 cut(s) 359, 402, 764, 1446
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstBI TTCGAA 1 cut(s) 1861
BstC8I GCNNGC 4 cut(s) 1050, 1213, 1516, 2176
BstDEI CTNAG 6 cut(s) 99, 273, 849, 981, 2000, 2040
BstDSI CCRYGG 3 cut(s) 949, 1383, 2211
BstKTI GATC 2 cut(s) 1600, 1914
BstMAI GTCTC 6 cut(s) 121, 683, 991, 1140, 2095, 2235
BstMBI GATC 2 cut(s) 1597, 1911
BstNI CCWGG 2 cut(s) 1390, 1922
BstNSI RCATGY 4 cut(s) 709, 912, 1215, 2207
BstSCI CCNGG 2 cut(s) 1388, 1920
BstSFI CTRYAG 4 cut(s) 236, 990, 1643, 2109
BstV1I GCAGC 3 cut(s) 1530, 1769, 1917
BstZ17I GTATAC 1 cut(s) 807
Bsu15I ATCGAT 1 cut(s) 1364
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 5 cut(s) 568, 1388, 1544, 1874, 2174
BsuTUI ATCGAT 1 cut(s) 1364
BtgI CCRYGG 3 cut(s) 949, 1383, 2211
BtsI GCAGTG 1 cut(s) 1791
BtsIMutI CAGTG 4 cut(s) 33, 964, 1791, 1914
BveI ACCTGC 1 cut(s) 905
Cac8I GCNNGC 4 cut(s) 1050, 1213, 1516, 2176
CaiI CAGNNNCTG 1 cut(s) 2175
CciI TCATGA 1 cut(s) 2188
Cfr10I RCCGGY 1 cut(s) 1935
Cfr13I GGNCC 2 cut(s) 1780, 2172
ClaI ATCGAT 1 cut(s) 1364
Csp6I GTAC 5 cut(s) 406, 925, 1318, 1624, 2051
CspAI ACCGGT 1 cut(s) 1935
CviQI GTAC 5 cut(s) 406, 925, 1318, 1624, 2051
DdeI CTNAG 6 cut(s) 99, 273, 849, 981, 2000, 2040
DpnI GATC 2 cut(s) 1599, 1913
DpnII GATC 2 cut(s) 1597, 1911
DraI TTTAAA 1 cut(s) 1179
DrdI GACNNNNNNGTC 1 cut(s) 1016
DseDI GACNNNNNNGTC 1 cut(s) 1016
EaeI YGGCCR 1 cut(s) 1872
Eam1104I CTCTTC 4 cut(s) 359, 402, 764, 1446
EarI CTCTTC 4 cut(s) 359, 402, 764, 1446
Ecl136II GAGCTC 2 cut(s) 1244, 1744
Eco130I CCWWGG 2 cut(s) 949, 2211
Eco24I GRGCYC 4 cut(s) 1246, 1686, 1746, 2124
Eco31I GGTCTC 2 cut(s) 121, 991
Eco47I GGWCC 1 cut(s) 1780
Eco53kI GAGCTC 2 cut(s) 1244, 1744
Eco57I CTGAAG 4 cut(s) 383, 831, 1455, 2043
Eco88I CYCGRG 1 cut(s) 1139
EcoICRI GAGCTC 2 cut(s) 1244, 1744
EcoO109I RGGNCCY 1 cut(s) 2172
EcoRI GAATTC 1 cut(s) 571
EcoRII CCWGG 2 cut(s) 1388, 1920
EcoT14I CCWWGG 2 cut(s) 949, 2211
EcoT22I ATGCAT 2 cut(s) 1417, 1828
EcoT38I GRGCYC 4 cut(s) 1246, 1686, 1746, 2124
ErhI CCWWGG 2 cut(s) 949, 2211
Esp3I CGTCTC 1 cut(s) 683
FalI AAGNNNNNCTT 6 cut(s) 1993, 2025, 2016, 2048, 2067, 2099
FbaI TGATCA 1 cut(s) 1597
FblI GTMKAC 1 cut(s) 806
Fnu4HI GCNGC 4 cut(s) 1519, 1758, 1851, 1906
FriOI GRGCYC 4 cut(s) 1246, 1686, 1746, 2124
Fsp4HI GCNGC 4 cut(s) 1519, 1758, 1851, 1906
FspBI CTAG 4 cut(s) 591, 675, 743, 1797
GluI GCNGC 4 cut(s) 1519, 1758, 1851, 1906
GsaI CCCAGC 1 cut(s) 827
GsuI CTGGAG 2 cut(s) 572, 1757
HaeIII GGCC 5 cut(s) 568, 1388, 1544, 1874, 2174
HapII CCGG 1 cut(s) 1936
HindIII AAGCTT 1 cut(s) 1705
HpaII CCGG 1 cut(s) 1936
HphI GGTGA 3 cut(s) 773, 1133, 2227
Hpy166II GTNNAC 7 cut(s) 91, 184, 340, 505, 807, 1009, 1624
Hpy188I TCNGA 6 cut(s) 102, 325, 402, 982, 1435, 1748
Hpy8I GTNNAC 7 cut(s) 91, 184, 340, 505, 807, 1009, 1624
HpyAV CCTTC 4 cut(s) 57, 244, 433, 933
HpyCH4III ACNGT 7 cut(s) 28, 361, 959, 1121, 1384, 1918, 2186
HpyF3I CTNAG 6 cut(s) 99, 273, 849, 981, 2000, 2040
Ksp22I TGATCA 1 cut(s) 1597
Kzo9I GATC 2 cut(s) 1597, 1911
LguI GCTCTTC 2 cut(s) 402, 1446
LmnI GCTCC 4 cut(s) 59, 139, 1241, 1295
Lsp1109I GCAGC 3 cut(s) 1530, 1769, 1917
LweI GCATC 7 cut(s) 382, 421, 633, 1249, 1678, 1835, 2008
MaeI CTAG 4 cut(s) 591, 675, 743, 1797
MaeIII GTNAC 7 cut(s) 761, 953, 1171, 1489, 1534, 1799, 2215
MalI GATC 2 cut(s) 1599, 1913
MboI GATC 2 cut(s) 1597, 1911
MfeI CAATTG 1 cut(s) 1221
MhlI GDGCHC 5 cut(s) 274, 1246, 1686, 1746, 2124
MlyI GAGTC 5 cut(s) 376, 563, 1031, 1142, 2237
MmeI TCCRAC 3 cut(s) 123, 1703, 2271
Mph1103I ATGCAT 2 cut(s) 1417, 1828
MroXI GAANNNNTTC 5 cut(s) 180, 443, 456, 1440, 2082
MseI TTAA 7 cut(s) 425, 963, 1056, 1157, 1178, 2160, 2265
MslI CAYNNNNRTG 6 cut(s) 26, 651, 948, 1257, 1425, 1808
MspA1I CMGCKG 3 cut(s) 374, 1760, 1908
MspI CCGG 1 cut(s) 1936
MspR9I CCNGG 2 cut(s) 1390, 1922
MunI CAATTG 1 cut(s) 1221
Mva1269I GAATGC 4 cut(s) 676, 937, 1283, 1464
MvaI CCWGG 2 cut(s) 1390, 1922
NcoI CCATGG 2 cut(s) 949, 2211
NdeII GATC 2 cut(s) 1597, 1911
NlaIV GGNNCC 2 cut(s) 1587, 1782
NmeAIII GCCGAG 1 cut(s) 1024
NmuCI GTSAC 2 cut(s) 761, 2215
NsiI ATGCAT 2 cut(s) 1417, 1828
NspI RCATGY 4 cut(s) 709, 912, 1215, 2207
NspV TTCGAA 1 cut(s) 1861
PaeI GCATGC 1 cut(s) 1215
PaeR7I CTCGAG 1 cut(s) 1139
PagI TCATGA 1 cut(s) 2188
PciI ACATGT 1 cut(s) 705
PciSI GCTCTTC 2 cut(s) 402, 1446
PctI GAATGC 4 cut(s) 676, 937, 1283, 1464
PdmI GAANNNNTTC 5 cut(s) 180, 443, 456, 1440, 2082
PfeI GAWTC 6 cut(s) 103, 977, 1361, 1559, 2027, 2253
PinAI ACCGGT 1 cut(s) 1935
PkrI GCNGC 4 cut(s) 1520, 1759, 1852, 1907
PleI GAGTC 5 cut(s) 375, 562, 1031, 1141, 2237
PpsI GAGTC 5 cut(s) 375, 562, 1031, 1141, 2237
PscI ACATGT 1 cut(s) 705
PsiI TTATAA 2 cut(s) 485, 659
Psp124BI GAGCTC 2 cut(s) 1246, 1746
Psp6I CCWGG 2 cut(s) 1388, 1920
PspFI CCCAGC 1 cut(s) 823
PspGI CCWGG 2 cut(s) 1388, 1920
PspN4I GGNNCC 2 cut(s) 1587, 1782
PspPI GGNCC 2 cut(s) 1780, 2172
PstNI CAGNNNCTG 1 cut(s) 2175
PvuII CAGCTG 2 cut(s) 1760, 1908
RsaI GTAC 5 cut(s) 407, 926, 1319, 1625, 2052
RsaNI GTAC 5 cut(s) 406, 925, 1318, 1624, 2051
RseI CAYNNNNRTG 6 cut(s) 26, 651, 948, 1257, 1425, 1808
SacI GAGCTC 2 cut(s) 1246, 1746
SapI GCTCTTC 2 cut(s) 402, 1446
SaqAI TTAA 7 cut(s) 425, 963, 1056, 1157, 1178, 2160, 2265
SatI GCNGC 4 cut(s) 1519, 1758, 1851, 1906
Sau3AI GATC 2 cut(s) 1597, 1911
Sau96I GGNCC 2 cut(s) 1780, 2172
ScaI AGTACT 1 cut(s) 926
SchI GAGTC 5 cut(s) 376, 563, 1031, 1142, 2237
ScrFI CCNGG 2 cut(s) 1390, 1922
SduI GDGCHC 5 cut(s) 274, 1246, 1686, 1746, 2124
SfaNI GCATC 7 cut(s) 382, 421, 633, 1249, 1678, 1835, 2008
SfcI CTRYAG 4 cut(s) 236, 990, 1643, 2109
Sfr274I CTCGAG 1 cut(s) 1139
SfuI TTCGAA 1 cut(s) 1861
SinI GGWCC 1 cut(s) 1780
SlaI CTCGAG 1 cut(s) 1139
SmiMI CAYNNNNRTG 6 cut(s) 26, 651, 948, 1257, 1425, 1808
SmlI CTYRAG 7 cut(s) 58, 383, 902, 1139, 1245, 1739, 1885
SmoI CTYRAG 7 cut(s) 58, 383, 902, 1139, 1245, 1739, 1885
SpeI ACTAGT 1 cut(s) 742
SphI GCATGC 1 cut(s) 1215
SsiI CCGC 5 cut(s) 263, 374, 495, 1256, 1851
SspMI CTAG 4 cut(s) 591, 675, 743, 1797
SstI GAGCTC 2 cut(s) 1246, 1746
StyD4I CCNGG 2 cut(s) 1388, 1920
StyI CCWWGG 2 cut(s) 949, 2211
TaaI ACNGT 7 cut(s) 28, 361, 959, 1121, 1384, 1918, 2186
TaqI TCGA 8 cut(s) 174, 200, 447, 893, 1140, 1364, 1732, 1861
TatI WGTACW 4 cut(s) 405, 924, 1317, 2050
TauI GCSGC 1 cut(s) 1853
TfiI GAWTC 6 cut(s) 103, 977, 1361, 1559, 2027, 2253
Tru1I TTAA 7 cut(s) 425, 963, 1056, 1157, 1178, 2160, 2265
Tru9I TTAA 7 cut(s) 425, 963, 1056, 1157, 1178, 2160, 2265
TscAI CASTG 4 cut(s) 33, 964, 1798, 1921
TseFI GTSAC 2 cut(s) 761, 2215
TseI GCWGC 3 cut(s) 1518, 1757, 1905
Tsp45I GTSAC 2 cut(s) 761, 2215
TspDTI ATGAA 7 cut(s) 10, 230, 260, 465, 1083, 1177, 1241
TspRI CASTG 4 cut(s) 33, 964, 1798, 1921
VpaK11BI GGWCC 1 cut(s) 1780
XapI RAATTY 6 cut(s) 230, 571, 1031, 1124, 1234, 1483
XceI RCATGY 4 cut(s) 709, 912, 1215, 2207
XcmI CCANNNNNNNNNTGG 1 cut(s) 1552
XhoI CTCGAG 1 cut(s) 1139
XmiI GTMKAC 1 cut(s) 806
XmnI GAANNNNTTC 5 cut(s) 180, 443, 456, 1440, 2082
XspI CTAG 4 cut(s) 591, 675, 743, 1797
ZrmI AGTACT 1 cut(s) 926
Zsp2I ATGCAT 2 cut(s) 1417, 1828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.