Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0005047

Physical Location & Seq

Genomic Coordinates Reverse (-)

52129143 .. 52132643

Gene Structure 3501 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0349100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCATCGGTTGATCTCCTTCATTGTCTGATCCTCACCGTATTTCTGGCCTTTTCCTTTGCTGTATCTGTCCAAACTTCTGACATAGTCCCTTTCCAATGCTCTGCTGCAACACTCGCGAGGTGTAATGCCTCACTATACCACATCAACAGCGGTTTTCAGAAAGAAGAAATCGCCTCTTTTTACTCTGTCGATCCATCTCAAGTCAATCCTATAAAGTATCACAATAAAGACGATCATCTCATAAGTGTACCTTGTTCTTGCAAAAGCATATTCAACACTACTGGATATTTCTATGATACAATCTACAAAGTGAAACCGTCAGACACATTTGATGACGTTTCGAATAATATCTACAGTGGGCAAGTTTTATCTGTCATAGAAGAACGAAAGCACAACTTTACAATAGGAGCTGATTTTCCCATTCATCTTCCTTGTGGGTGTGTAGATAGTGATTCTCAGATTGTGGTAACATACACAGTTCAGGACAAAGATACACTGACAGATATTGCCACTCTGCTGTCTGCCAAGATAGAAAACATAGAAAGCATGAACAAGAATCAGGTTGAGAACCCGTCATACATAGAACCCGGTTGGGTGTTGTTTGTGCCCTCGGAAAAGAATGGACTTAAAAAGCCAGGAAGCAGACACAAGTGGGCAATATTGGTTATTGGCATACTATCAGCTGTGACATTGCTTTCACTAAGCACATTCATCCTCCTGCTATTTAGGAGAAAAGCTGCAGCCAAAGAAAATATGGAAGCTCCAAAAGTTGTATCCAAAACTTTGTCTGCCAATAAATCTTTTTCGTTGCATAATCAGTTACTTCATCAGCAATACATGGAAGATGCAACAGTTTTTGAATCAGACGGACCGGTAGTATTTTCTCTCAAGGAGATAGAAGAGGCTACCGGTTATTTTGATGAAAGTAAGATCATTGGAGAGGGTGGATATGGTAAAGTATACTTCGGAGTACTAGGGGAAAAGGAGGTCGCCATAAAGAAGATGAGATCTAATAAGTGCAAAGAATTCTTTGCAGAGCTAAAGGTCTTATGCAAGATCCATCACATTAATGTGGTGGAGCTTTTAGGGTACGCCAGTGGCCAGGACCACCTCTACCTGGTCTATGAGTATATTCAGAATGGATCATTGAGCGAACATCTTCATGATCCATTGCTTAAAGGTCATCAGCCTCTCTCCTGGACTGCAAGAACACAAATTGCACTGGATACTGCAAAAGGTATTGAATACATTCATGACCACACAAAAGCTCGATATGTGCACCGTGATATAAAGACAAGTAACATTCTACTTGATGAGGGTCTCAGAGCAAAGGTAGCAGATTTTGGTTTGGCAAAGCTTGTTGGAAGAACCAATGAAGAAGATATTATAGCCACAAGACTCGTTGGAACACCGGGCTATCTCCCCCCAGAATCTGTGCAGGAGCTCCAGGTGACTCACAAGACTGATGTATTTGCATTTGGAGTGGTACTTGGAGAACTGATTACAGGGCAACTTGCACTGTTCCGTGACAACCGGGAGCCTGCAAAGATGAAATCTTTGATTACAGTAATAAAAAAGGTGTTCCAAGATGGTGAACCAGAATTAGCTTTGGAGGCTGTCACAGACCCTAGTCTCCAGGGCAACTATCCTATAGAAGAGATATTCAAGATGGCAGAAATATCAGAGTGGTGTTTGAGTGAAGAAGCAGTGGGAAGGCCAGAGATGAGAGAGATTGTTGTGCTGCTCTCACAAATTGTGACAACCTCTACTGAGTGGGAAGCATCACTTGGCGGTAACAGTCAAGTTTTCAGTGGCTTGTTTGATGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004766 GO:0005575 GO:0005623 GO:0005886 GO:0006576 GO:0006595 GO:0006596 GO:0006807 GO:0008150 GO:0008152 GO:0008216 GO:0008295 GO:0009058 GO:0009308 GO:0009309 GO:0009987 GO:0016020 GO:0016740 GO:0016765 GO:0034641 GO:0042401 GO:0044106 GO:0044237 GO:0044249 GO:0044271 GO:0044464 GO:0071704 GO:0071944 GO:0097164 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00270 ko00330 ko00410 ko00480 ko01100 map00270 map00330 map00410 map00480 map01100

Pfam Domains

Protein Families

Spermine_synt_N Spermine_synth

Protein Analysis

611

Amino Acids

68.05

Weight (kDa)

5.5

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	308 - 579	4.1e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	310 - 579	1.9e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005047)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23820 AT1G23820 AT1G70310
fragaria_vesca	FvH4_4g34680
malus_domestica	MD13G1090400.v1.1 MD14G1183600.v1.1 MD16G1091000.v1.1
prunus_persica	Prupe.1G255300_v2.0.a1 Prupe.5G176100_v2.0.a1
pyrus_communis	pycom13g07870 pycom16g07770
rosa_chinensis	RchiOBHm_Chr4g0444031 RchiOBHm_Chr7g0193881
rosa_laevigata	RLG00000004238 RLG00000005863
rosa_multiflora	Rmu_sc0015522.1_g000006
rosa_roxburghii	Rroxscaffold_3G00261760 Rroxscaffold_5G00384600
rosa_rugosa	Rorug04G0349100 Rorug07G0012500
rosa_samantha	Rh4AG409900 Rh4BG421000 Rh4CG435300 Rh4DG416200 Rh7AG139200 Rh7BG139600 Rh7CG143100 Rh7DG140700
rosa_wichuraiana	Rw4G035210 Rw7G011880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	963
AccII	CGCG	1 cut(s)	119
AciI	CCGC	2 cut(s)	153, 1794
AclWI	GGATC	5 cut(s)	25, 188, 1054, 1153, 1163
AcoI	YGGCCR	1 cut(s)	1102
AcsI	RAATTY	1 cut(s)	1028
AfaI	GTAC	4 cut(s)	252, 975, 1094, 1491
AfiI	CCNNNNNNNGG	1 cut(s)	1120
AgeI	ACCGGT	2 cut(s)	874, 911
AgsI	TTSAA	4 cut(s)	277, 863, 1247, 1669
AjnI	CCWGG	6 cut(s)	637, 1104, 1119, 1199, 1449, 1638
AjuI	GAANNNNNNNTTGG	2 cut(s)	1773, 1805
Alw21I	GWGCWC	2 cut(s)	1284, 1449
Alw26I	GTCTC	2 cut(s)	1328, 1640
Alw44I	GTGCAC	1 cut(s)	1280
AlwI	GGATC	5 cut(s)	25, 188, 1054, 1153, 1163
AlwNI	CAGNNNCTG	1 cut(s)	1436
AoxI	GGCC	3 cut(s)	48, 1102, 1718
ApaLI	GTGCAC	1 cut(s)	1280
ApeKI	GCWGC	4 cut(s)	107, 740, 743, 1744
ApoI	RAATTY	1 cut(s)	1028
AseI	ATTAAT	1 cut(s)	1071
AsiGI	ACCGGT	2 cut(s)	874, 911
Asp700I	GAANNNNTTC	2 cut(s)	1161, 1251
AspS9I	GGNCC	2 cut(s)	872, 1108
AsuC2I	CCSGG	3 cut(s)	591, 1416, 1538
AsuHPI	GGTGA	3 cut(s)	28, 1465, 1607
AsuII	TTCGAA	1 cut(s)	344
AvaII	GGWCC	2 cut(s)	872, 1108
BaeGI	GKGCMC	2 cut(s)	612, 1284
BaeI	ACNNNNGTAYC	2 cut(s)	1084, 1117
BalI	TGGCCA	1 cut(s)	1104
BanII	GRGCYC	1 cut(s)	1449
Bbv12I	GWGCWC	2 cut(s)	1284, 1449
BbvI	GCAGC	4 cut(s)	94, 727, 755, 1731
BccI	CCATC	5 cut(s)	205, 1071, 1586, 1666, 1820
BciT130I	CCWGG	6 cut(s)	639, 1106, 1121, 1201, 1451, 1640
BciVI	GTATCC	2 cut(s)	787, 1222
BcnI	CCSGG	3 cut(s)	591, 1416, 1538
BcoDI	GTCTC	2 cut(s)	1328, 1640
BfaI	CTAG	2 cut(s)	977, 1632
BfmI	CTRYAG	3 cut(s)	355, 741, 1653
BfuI	GTATCC	2 cut(s)	787, 1222
BglII	AGATCT	1 cut(s)	1010
BisI	GCNGC	4 cut(s)	108, 741, 744, 1745
BlsI	GCNGC	4 cut(s)	109, 742, 745, 1746
BmcAI	AGTACT	1 cut(s)	975
Bme1390I	CCNGG	9 cut(s)	591, 639, 1106, 1121, 1201, 1416, 1451, 1538, 1640
Bme18I	GGWCC	2 cut(s)	872, 1108
BmgT120I	GGNCC	2 cut(s)	872, 1108
BmiI	GGNNCC	1 cut(s)	1542
BmrFI	CCNGG	9 cut(s)	591, 639, 1106, 1121, 1201, 1416, 1451, 1538, 1640
BmsI	GCATC	3 cut(s)	14, 838, 1793
BoxI	GACNNNNGTC	1 cut(s)	1632
BpmI	CTGGAG	2 cut(s)	1433, 1622
Bpu14I	TTCGAA	1 cut(s)	344
BpuEI	CTTGAG	2 cut(s)	186, 875
BpuMI	CCSGG	3 cut(s)	591, 1416, 1538
BsaI	GGTCTC	1 cut(s)	1328
BsaJI	CCNNGG	2 cut(s)	612, 1639
BsaWI	WCCGGW	2 cut(s)	874, 911
Bsc4I	CCNNNNNNNGG	1 cut(s)	1120
Bse118I	RCCGGY	2 cut(s)	874, 911
Bse1I	ACTGG	3 cut(s)	289, 1098, 1230
Bse3DI	GCAATG	2 cut(s)	692, 1172
BseBI	CCWGG	6 cut(s)	639, 1106, 1121, 1201, 1451, 1640
BseDI	CCNNGG	2 cut(s)	612, 1639
BseGI	GGATG	1 cut(s)	714
BseLI	CCNNNNNNNGG	1 cut(s)	1120
BseMI	GCAATG	2 cut(s)	692, 1172
BseMII	CTCAG	3 cut(s)	473, 1339, 1764
BseNI	ACTGG	3 cut(s)	289, 1098, 1230
BseSI	GKGCMC	2 cut(s)	612, 1284
BseXI	GCAGC	4 cut(s)	94, 727, 755, 1731
BsgI	GTGCAG	1 cut(s)	1460
Bsh1236I	CGCG	1 cut(s)	119
BshFI	GGCC	3 cut(s)	50, 1104, 1720
BshTI	ACCGGT	2 cut(s)	874, 911
BsiHKAI	GWGCWC	2 cut(s)	1284, 1449
BsiSI	CCGG	5 cut(s)	591, 875, 912, 1415, 1537
BslFI	GGGAC	1 cut(s)	74
BslI	CCNNNNNNNGG	1 cut(s)	1120
BsmAI	GTCTC	2 cut(s)	1328, 1640
BsmFI	GGGAC	1 cut(s)	74
BsnI	GGCC	3 cut(s)	50, 1104, 1720
Bso31I	GGTCTC	1 cut(s)	1328
Bsp119I	TTCGAA	1 cut(s)	344
Bsp1286I	GDGCHC	3 cut(s)	612, 1284, 1449
Bsp143I	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
Bsp68I	TCGCGA	1 cut(s)	119
BspACI	CCGC	2 cut(s)	153, 1794
BspANI	GGCC	3 cut(s)	50, 1104, 1720
BspCNI	CTCAG	3 cut(s)	472, 1338, 1765
BspFNI	CGCG	1 cut(s)	119
BspHI	TCATGA	2 cut(s)	1165, 1255
BspLI	GGNNCC	1 cut(s)	1542
BspMAI	CTGCAG	1 cut(s)	745
BspPI	GGATC	5 cut(s)	25, 188, 1054, 1153, 1163
BspT104I	TTCGAA	1 cut(s)	344
BspTNI	GGTCTC	1 cut(s)	1328
BsrDI	GCAATG	2 cut(s)	692, 1172
BsrFI	RCCGGY	2 cut(s)	874, 911
BsrI	ACTGG	3 cut(s)	289, 1098, 1230
BssAI	RCCGGY	2 cut(s)	874, 911
BssECI	CCNNGG	2 cut(s)	612, 1639
BssMI	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
BssNAI	GTATAC	1 cut(s)	964
Bst1107I	GTATAC	1 cut(s)	964
Bst2UI	CCWGG	6 cut(s)	639, 1106, 1121, 1201, 1451, 1640
Bst4CI	ACNGT	9 cut(s)	40, 321, 359, 481, 856, 1286, 1524, 1570, 1802
Bst6I	CTCTTC	2 cut(s)	897, 1653
BstBI	TTCGAA	1 cut(s)	344
BstC8I	GCNNGC	1 cut(s)	1545
BstDEI	CTNAG	4 cut(s)	459, 704, 1325, 1773
BstF5I	GGATG	1 cut(s)	714
BstFNI	CGCG	1 cut(s)	119
BstKTI	GATC	9 cut(s)	16, 33, 196, 238, 936, 1013, 1062, 1148, 1171
BstMAI	GTCTC	2 cut(s)	1328, 1640
BstMBI	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
BstMWI	GCNNNNNNNGC	3 cut(s)	116, 1337, 1616
BstNI	CCWGG	6 cut(s)	639, 1106, 1121, 1201, 1451, 1640
BstPAI	GACNNNNGTC	1 cut(s)	1632
BstSCI	CCNGG	9 cut(s)	589, 637, 1104, 1119, 1199, 1414, 1449, 1536, 1638
BstSFI	CTRYAG	3 cut(s)	355, 741, 1653
BstSLI	GKGCMC	2 cut(s)	612, 1284
BstUI	CGCG	1 cut(s)	119
BstV1I	GCAGC	4 cut(s)	94, 727, 755, 1731
BstX2I	RGATCY	2 cut(s)	1010, 1059
BstYI	RGATCY	2 cut(s)	1010, 1059
BstZ17I	GTATAC	1 cut(s)	964
BsuI	GTATCC	2 cut(s)	787, 1222
BsuRI	GGCC	3 cut(s)	50, 1104, 1720
BtsCI	GGATG	1 cut(s)	714
BtsI	GCAGTG	1 cut(s)	1716
BtsIMutI	CAGTG	7 cut(s)	364, 497, 1105, 1223, 1520, 1716, 1819
BtuMI	TCGCGA	1 cut(s)	119
Cac8I	GCNNGC	1 cut(s)	1545
CaiI	CAGNNNCTG	1 cut(s)	1436
CciI	TCATGA	2 cut(s)	1165, 1255
Cfr10I	RCCGGY	2 cut(s)	874, 911
Cfr13I	GGNCC	2 cut(s)	872, 1108
CpoI	CGGWCCG	1 cut(s)	872
CsiI	ACCWGGT	1 cut(s)	1119
Csp6I	GTAC	4 cut(s)	251, 974, 1093, 1490
CspAI	ACCGGT	2 cut(s)	874, 911
CspI	CGGWCCG	1 cut(s)	872
CviAII	CATG	4 cut(s)	550, 841, 1166, 1256
CviQI	GTAC	4 cut(s)	251, 974, 1093, 1490
DdeI	CTNAG	4 cut(s)	459, 704, 1325, 1773
DpnI	GATC	9 cut(s)	15, 32, 195, 237, 935, 1012, 1061, 1147, 1170
DpnII	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
EaeI	YGGCCR	1 cut(s)	1102
Eam1104I	CTCTTC	2 cut(s)	897, 1653
EarI	CTCTTC	2 cut(s)	897, 1653
Ecl136II	GAGCTC	1 cut(s)	1447
Eco24I	GRGCYC	1 cut(s)	1449
Eco31I	GGTCTC	1 cut(s)	1328
Eco47I	GGWCC	2 cut(s)	872, 1108
Eco53kI	GAGCTC	1 cut(s)	1447
EcoICRI	GAGCTC	1 cut(s)	1447
EcoRI	GAATTC	1 cut(s)	1028
EcoRII	CCWGG	6 cut(s)	637, 1104, 1119, 1199, 1449, 1638
EcoT38I	GRGCYC	1 cut(s)	1449
FaeI	CATG	4 cut(s)	553, 844, 1169, 1259
FalI	AAGNNNNNCTT	6 cut(s)	238, 270, 383, 415, 1773, 1805
FaqI	GGGAC	1 cut(s)	74
FatI	CATG	4 cut(s)	549, 840, 1165, 1255
FblI	GTMKAC	1 cut(s)	963
Fnu4HI	GCNGC	4 cut(s)	108, 741, 744, 1745
FokI	GGATG	1 cut(s)	701
FriOI	GRGCYC	1 cut(s)	1449
Fsp4HI	GCNGC	4 cut(s)	108, 741, 744, 1745
FspBI	CTAG	2 cut(s)	977, 1632
GluI	GCNGC	4 cut(s)	108, 741, 744, 1745
GsuI	CTGGAG	2 cut(s)	1433, 1622
HaeIII	GGCC	3 cut(s)	50, 1104, 1720
HapII	CCGG	5 cut(s)	591, 875, 912, 1415, 1537
Hin1II	CATG	4 cut(s)	553, 844, 1169, 1259
HindIII	AAGCTT	1 cut(s)	1358
HinfI	GANTC	6 cut(s)	455, 559, 863, 1401, 1433, 1456
HpaII	CCGG	5 cut(s)	591, 875, 912, 1415, 1537
HphI	GGTGA	3 cut(s)	28, 1465, 1607
Hpy166II	GTNNAC	4 cut(s)	251, 964, 1282, 1598
Hpy188III	TCNNGA	5 cut(s)	118, 485, 1166, 1256, 1669
Hpy8I	GTNNAC	4 cut(s)	251, 964, 1282, 1598
HpyAV	CCTTC	2 cut(s)	29, 1710
HpyCH4III	ACNGT	9 cut(s)	40, 321, 359, 481, 856, 1286, 1524, 1570, 1802
HpyCH4IV	ACGT	1 cut(s)	339
HpyF10VI	GCNNNNNNNGC	3 cut(s)	116, 1337, 1616
HpyF3I	CTNAG	4 cut(s)	459, 704, 1325, 1773
HpySE526I	ACGT	1 cut(s)	339
Hsp92II	CATG	4 cut(s)	553, 844, 1169, 1259
Kzo9I	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
LmnI	GCTCC	6 cut(s)	410, 769, 1081, 1444, 1452, 1540
Lsp1109I	GCAGC	4 cut(s)	94, 727, 755, 1731
LweI	GCATC	3 cut(s)	14, 838, 1793
MabI	ACCWGGT	1 cut(s)	1119
MaeI	CTAG	2 cut(s)	977, 1632
MaeII	ACGT	1 cut(s)	339
MaeIII	GTNAC	9 cut(s)	469, 688, 822, 1301, 1453, 1529, 1621, 1759, 1796
MalI	GATC	9 cut(s)	15, 32, 195, 237, 935, 1012, 1061, 1147, 1170
MboI	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
MflI	RGATCY	2 cut(s)	1010, 1059
MhlI	GDGCHC	3 cut(s)	612, 1284, 1449
MlsI	TGGCCA	1 cut(s)	1104
MluCI	AATT	4 cut(s)	1028, 1218, 1604, 1755
MluNI	TGGCCA	1 cut(s)	1104
MlyI	GAGTC	2 cut(s)	1395, 1450
MmeI	TCCRAC	2 cut(s)	1345, 1387
Mox20I	TGGCCA	1 cut(s)	1104
MroXI	GAANNNNTTC	2 cut(s)	1161, 1251
MscI	TGGCCA	1 cut(s)	1104
MseI	TTAA	3 cut(s)	630, 1071, 1179
MslI	CAYNNNNRTG	3 cut(s)	1071, 1073, 1164
Msp20I	TGGCCA	1 cut(s)	1104
MspA1I	CMGCKG	2 cut(s)	153, 686
MspI	CCGG	5 cut(s)	591, 875, 912, 1415, 1537
MspR9I	CCNGG	9 cut(s)	591, 639, 1106, 1121, 1201, 1416, 1451, 1538, 1640
MvaI	CCWGG	6 cut(s)	639, 1106, 1121, 1201, 1451, 1640
MvnI	CGCG	1 cut(s)	119
MwoI	GCNNNNNNNGC	3 cut(s)	116, 1337, 1616
NciI	CCSGG	3 cut(s)	591, 1416, 1538
NdeII	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
NlaIII	CATG	4 cut(s)	553, 844, 1169, 1259
NlaIV	GGNNCC	1 cut(s)	1542
NmuCI	GTSAC	5 cut(s)	688, 1453, 1529, 1621, 1759
NruI	TCGCGA	1 cut(s)	119
NspV	TTCGAA	1 cut(s)	344
PagI	TCATGA	2 cut(s)	1165, 1255
PdmI	GAANNNNTTC	2 cut(s)	1161, 1251
PfeI	GAWTC	4 cut(s)	455, 559, 863, 1433
PflFI	GACNNNGTC	1 cut(s)	86
PfoI	TCCNGGA	1 cut(s)	1199
PinAI	ACCGGT	2 cut(s)	874, 911
PkrI	GCNGC	4 cut(s)	109, 742, 745, 1746
PleI	GAGTC	2 cut(s)	1395, 1450
PpsI	GAGTC	2 cut(s)	1395, 1450
PshAI	GACNNNNGTC	1 cut(s)	1632
PshBI	ATTAAT	1 cut(s)	1071
Psp124BI	GAGCTC	1 cut(s)	1449
Psp6I	CCWGG	6 cut(s)	637, 1104, 1119, 1199, 1449, 1638
PspGI	CCWGG	6 cut(s)	637, 1104, 1119, 1199, 1449, 1638
PspN4I	GGNNCC	1 cut(s)	1542
PspPI	GGNCC	2 cut(s)	872, 1108
PsrI	GAACNNNNNNTAC	2 cut(s)	563, 595
PstI	CTGCAG	1 cut(s)	745
PstNI	CAGNNNCTG	1 cut(s)	1436
PsuI	RGATCY	2 cut(s)	1010, 1059
PsyI	GACNNNGTC	1 cut(s)	86
PvuII	CAGCTG	1 cut(s)	686
RruI	TCGCGA	1 cut(s)	119
RsaI	GTAC	4 cut(s)	252, 975, 1094, 1491
RsaNI	GTAC	4 cut(s)	251, 974, 1093, 1490
RseI	CAYNNNNRTG	3 cut(s)	1071, 1073, 1164
Rsr2I	CGGWCCG	1 cut(s)	872
RsrII	CGGWCCG	1 cut(s)	872
SacI	GAGCTC	1 cut(s)	1449
SaqAI	TTAA	3 cut(s)	630, 1071, 1179
SatI	GCNGC	4 cut(s)	108, 741, 744, 1745
Sau3AI	GATC	9 cut(s)	13, 30, 193, 235, 933, 1010, 1059, 1145, 1168
Sau96I	GGNCC	2 cut(s)	872, 1108
ScaI	AGTACT	1 cut(s)	975
SchI	GAGTC	2 cut(s)	1395, 1450
ScrFI	CCNGG	9 cut(s)	591, 639, 1106, 1121, 1201, 1416, 1451, 1538, 1640
SduI	GDGCHC	3 cut(s)	612, 1284, 1449
SexAI	ACCWGGT	1 cut(s)	1119
SfaNI	GCATC	3 cut(s)	14, 838, 1793
SfcI	CTRYAG	3 cut(s)	355, 741, 1653
SfuI	TTCGAA	1 cut(s)	344
SinI	GGWCC	2 cut(s)	872, 1108
SmiMI	CAYNNNNRTG	3 cut(s)	1071, 1073, 1164
SmlI	CTYRAG	2 cut(s)	201, 890
SmoI	CTYRAG	2 cut(s)	201, 890
Sse9I	AATT	4 cut(s)	1028, 1218, 1604, 1755
SsiI	CCGC	2 cut(s)	153, 1794
SspI	AATATT	1 cut(s)	663
SspMI	CTAG	2 cut(s)	977, 1632
SstI	GAGCTC	1 cut(s)	1449
StyD4I	CCNGG	9 cut(s)	589, 637, 1104, 1119, 1199, 1414, 1449, 1536, 1638
TaaI	ACNGT	9 cut(s)	40, 321, 359, 481, 856, 1286, 1524, 1570, 1802
TaiI	ACGT	1 cut(s)	342
TaqI	TCGA	3 cut(s)	192, 344, 1273
TasI	AATT	4 cut(s)	1028, 1218, 1604, 1755
TatI	WGTACW	1 cut(s)	973
TfiI	GAWTC	4 cut(s)	455, 559, 863, 1433
Tru1I	TTAA	3 cut(s)	630, 1071, 1179
Tru9I	TTAA	3 cut(s)	630, 1071, 1179
TscAI	CASTG	7 cut(s)	364, 504, 1105, 1230, 1527, 1716, 1819
TseFI	GTSAC	5 cut(s)	688, 1453, 1529, 1621, 1759
TseI	GCWGC	4 cut(s)	107, 740, 743, 1744
Tsp45I	GTSAC	5 cut(s)	688, 1453, 1529, 1621, 1759
TspGWI	ACGGA	2 cut(s)	885, 1517
TspRI	CASTG	7 cut(s)	364, 504, 1105, 1230, 1527, 1716, 1819
Tth111I	GACNNNGTC	1 cut(s)	86
VneI	GTGCAC	1 cut(s)	1280
VpaK11BI	GGWCC	2 cut(s)	872, 1108
VspI	ATTAAT	1 cut(s)	1071
XapI	RAATTY	1 cut(s)	1028
XcmI	CCANNNNNNNNNTGG	1 cut(s)	754
XmiI	GTMKAC	1 cut(s)	963
XmnI	GAANNNNTTC	2 cut(s)	1161, 1251
XspI	CTAG	2 cut(s)	977, 1632
ZrmI	AGTACT	1 cut(s)	975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.