Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0011708

Physical Location & Seq

Genomic Coordinates Forward (+)

59808855 .. 59809871

Gene Structure 1017 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0441600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1017 bp

ATGTCTTCAAGTGAAGACAACATCAACAAAGGATGGTGGAGAAGCCTGTGGATCCACTTGAACCTCCCAAGTTTCGGCACAAGCATGTCCCGAGGGCTTCTGAAGAGCCGCCTGTCCCGGTGCTGTTCTCCTCCTAGGCCGGTGAGTGCGGCTGATAAGAAGGACTGGAGTATTCCGCCTTGTATTTCACAGTTCAAGAACCCGAAAGGGTATACAATCCCATTGGACAAACGCGAAGGAGTTGATGGGAGACGCCTTCAAGATGTTCAGATCAGTGAGAAATTTGCACATCTTCATGACTCTTTGCATGTAGCACTAGTGAAATGTAAGGAGGAATTTAATCTAAGAGCGAGAGTTCAGATGGAGAGGATGGAGAAGGAGCAGGAAAGCAGAAACCAGGAGCTAAGAGATATAGCTCAGAGAGCTCGTGCAGAGAGAACAGCTATTGCTGCTGCTATTCCAGAGCCTAATGGTGAGAAGACAGCAATGGATACTGATGAAACAAAAGAAGAGAGATTGAAGCGGGATGAGGTTCGTCGAGAGAGCGAAAGGGAGAGAAGGTTGACAAAGAATAAGAGAACTAGAGTCACAAGAGATGGCGATCGTGATATCAGTGAGAAAATTGCTCTTGGCATGGCTTCTACTGGAGTTGGAGGGGAAAGAGGGGAAGAGGTTATGTATGACCAGATGTTGTTTAGCCAGCAGAAAGGAATGGACTCTGGGTTTGGCAACGATGACCAGTACAATGTCTACGAGAAGCGCTTGTTTACTGCTCAGTCTACACTCTCGAGCCTGTACAGGCCTAAGAAGGATGTTGATGCTGATACCTATGGAGGTGCTGATGAGCAGTTGGATAAGATCATGAAGACTGATCGCTTCAAACCTCACAAAGGATTTGGAGGAACTACTGAAAGGGCAGGTCCGAGAGATAGACCGGTTGAGTTTGATCAGGATGTTAAAGAAGCTGATCCCTTTGGTCTCGACGAGATAGTGGCAAAGATGAAGAAGGCAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDT HARE-HTH Homeobox WHIM1 WSD

Protein Analysis

338

Amino Acids

38.72

Weight (kDa)

8.85

Isoelectric Point (pI)

47.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SKIP_SNW	PF02731	43 - 146	7.3e-35	SKIP/SNW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28420
fragaria_vesca	FvH4_3g08620
malus_domestica	MD05G1310200.v1.1 MD10G1289100.v1.1
prunus_persica	Prupe.4G052600_v2.0.a1
pyrus_communis	pycom05g28660 pycom10g24170
rosa_chinensis	RchiOBHm_Chr5g0009221
rosa_laevigata	RLG00000031635 RLG00000031641
rosa_multiflora	Rmu_sc0006233.1_g000030
rosa_roxburghii	Rroxscaffold_1G00066840 Rroxscaffold_1G00067540
rosa_rugosa	Rorug04G0441600
rosa_samantha	Rh5AG071400 Rh5BG067900 Rh5CG080200 Rh5DG067900
rosa_wichuraiana	Rw5G006670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	908
AccI	GTMKAC	3 cut(s)	212, 750, 779
AccII	CGCG	1 cut(s)	234
AciI	CCGC	4 cut(s)	109, 149, 176, 523
AclWI	GGATC	3 cut(s)	46, 59, 962
AcsI	RAATTY	2 cut(s)	281, 335
AcuI	CTGAAG	1 cut(s)	122
AcyI	GRCGYC	1 cut(s)	253
AfaI	GTAC	2 cut(s)	743, 797
AfeI	AGCGCT	1 cut(s)	761
AfiI	CCNNNNNNNGG	2 cut(s)	74, 890
AgeI	ACCGGT	1 cut(s)	934
AgsI	TTSAA	6 cut(s)	9, 61, 196, 260, 520, 880
AhlI	ACTAGT	1 cut(s)	316
AjnI	CCWGG	1 cut(s)	396
AluBI	AGCT	5 cut(s)	403, 416, 425, 443, 965
AluI	AGCT	5 cut(s)	403, 416, 425, 443, 965
Alw21I	GWGCWC	1 cut(s)	427
Alw26I	GTCTC	2 cut(s)	244, 983
AlwI	GGATC	3 cut(s)	46, 59, 962
Ama87I	CYCGRG	2 cut(s)	90, 787
Aor51HI	AGCGCT	1 cut(s)	761
AoxI	GGCC	2 cut(s)	137, 800
ApeKI	GCWGC	2 cut(s)	449, 452
ApoI	RAATTY	2 cut(s)	281, 335
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
AsiGI	ACCGGT	1 cut(s)	934
AspA2I	CCTAGG	1 cut(s)	134
AspLEI	GCGC	1 cut(s)	762
AspS9I	GGNCC	1 cut(s)	920
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	2 cut(s)	154, 485
AvaI	CYCGRG	2 cut(s)	90, 787
AvaII	GGWCC	1 cut(s)	920
AvrII	CCTAGG	1 cut(s)	134
BamHI	GGATCC	1 cut(s)	51
BanII	GRGCYC	1 cut(s)	427
BauI	CACGAG	1 cut(s)	426
BbsI	GAAGAC	3 cut(s)	21, 485, 872
Bbv12I	GWGCWC	1 cut(s)	427
BbvI	GCAGC	2 cut(s)	436, 439
BccI	CCATC	5 cut(s)	27, 239, 355, 364, 590
BciT130I	CCWGG	1 cut(s)	398
BciVI	GTATCC	1 cut(s)	484
BclI	TGATCA	1 cut(s)	946
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	2 cut(s)	244, 983
BcuI	ACTAGT	1 cut(s)	316
BfaI	CTAG	3 cut(s)	135, 317, 582
BfoI	RGCGCY	1 cut(s)	763
BfuAI	ACCTGC	1 cut(s)	908
BfuI	GTATCC	1 cut(s)	484
BisI	GCNGC	4 cut(s)	109, 150, 450, 453
BlnI	CCTAGG	1 cut(s)	134
BlsI	GCNGC	4 cut(s)	110, 151, 451, 454
Bme1390I	CCNGG	2 cut(s)	118, 398
Bme18I	GGWCC	1 cut(s)	920
BmeT110I	CYCGRG	2 cut(s)	90, 787
BmgT120I	GGNCC	1 cut(s)	920
BmiI	GGNNCC	1 cut(s)	53
BmrFI	CCNGG	2 cut(s)	118, 398
BmsI	GCATC	1 cut(s)	808
BpiI	GAAGAC	3 cut(s)	21, 485, 872
BpmI	CTGGAG	2 cut(s)	187, 666
BpuMI	CCSGG	1 cut(s)	118
BsaBI	GATNNNNATC	1 cut(s)	600
BsaHI	GRCGYC	1 cut(s)	253
BsaI	GGTCTC	1 cut(s)	983
BsaJI	CCNNGG	2 cut(s)	91, 134
BsaWI	WCCGGW	1 cut(s)	934
BsaXI	ACNNNNNCTCC	2 cut(s)	545, 575
Bsc4I	CCNNNNNNNGG	2 cut(s)	74, 890
Bse118I	RCCGGY	2 cut(s)	139, 934
Bse1I	ACTGG	3 cut(s)	170, 649, 739
Bse3DI	GCAATG	1 cut(s)	492
Bse8I	GATNNNNATC	1 cut(s)	600
BseBI	CCWGG	1 cut(s)	398
BseDI	CCNNGG	2 cut(s)	91, 134
BseGI	GGATG	5 cut(s)	38, 375, 532, 817, 958
BseJI	GATNNNNATC	1 cut(s)	600
BseLI	CCNNNNNNNGG	2 cut(s)	74, 890
BseMI	GCAATG	1 cut(s)	492
BseMII	CTCAG	2 cut(s)	431, 788
BseNI	ACTGG	3 cut(s)	170, 649, 739
BseRI	GAGGAG	1 cut(s)	120
BseXI	GCAGC	2 cut(s)	436, 439
BsgI	GTGCAG	1 cut(s)	450
Bsh1236I	CGCG	1 cut(s)	234
Bsh1285I	CGRYCG	1 cut(s)	604
BshFI	GGCC	2 cut(s)	139, 802
BshTI	ACCGGT	1 cut(s)	934
BsiEI	CGRYCG	1 cut(s)	604
BsiHKAI	GWGCWC	1 cut(s)	427
BsiHKCI	CYCGRG	2 cut(s)	90, 787
BsiSI	CCGG	3 cut(s)	118, 140, 935
BslFI	GGGAC	2 cut(s)	73, 100
BslI	CCNNNNNNNGG	2 cut(s)	74, 890
BsmAI	GTCTC	2 cut(s)	244, 983
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	2 cut(s)	73, 100
BsnI	GGCC	2 cut(s)	139, 802
Bso31I	GGTCTC	1 cut(s)	983
BsoBI	CYCGRG	2 cut(s)	90, 787
Bsp1286I	GDGCHC	1 cut(s)	427
Bsp1407I	TGTACA	1 cut(s)	795
Bsp143I	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
BspACI	CCGC	4 cut(s)	109, 149, 176, 523
BspANI	GGCC	2 cut(s)	139, 802
BspCNI	CTCAG	2 cut(s)	430, 787
BspFNI	CGCG	1 cut(s)	234
BspHI	TCATGA	2 cut(s)	295, 861
BspLI	GGNNCC	1 cut(s)	53
BspMI	ACCTGC	1 cut(s)	908
BspPI	GGATC	3 cut(s)	46, 59, 962
BspQI	GCTCTTC	1 cut(s)	98
BspTNI	GGTCTC	1 cut(s)	983
BsrDI	GCAATG	1 cut(s)	492
BsrFI	RCCGGY	2 cut(s)	139, 934
BsrGI	TGTACA	1 cut(s)	795
BsrI	ACTGG	3 cut(s)	170, 649, 739
BssAI	RCCGGY	2 cut(s)	139, 934
BssECI	CCNNGG	2 cut(s)	91, 134
BssMI	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
BssNAI	GTATAC	1 cut(s)	213
BssNI	GRCGYC	1 cut(s)	253
BssSI	CACGAG	1 cut(s)	426
BssT1I	CCWWGG	1 cut(s)	134
Bst1107I	GTATAC	1 cut(s)	213
Bst2BI	CACGAG	1 cut(s)	426
Bst2UI	CCWGG	1 cut(s)	398
Bst4CI	ACNGT	1 cut(s)	192
Bst6I	CTCTTC	3 cut(s)	98, 504, 663
BstACI	GRCGYC	1 cut(s)	253
BstAUI	TGTACA	1 cut(s)	795
BstC8I	GCNNGC	1 cut(s)	701
BstDEI	CTNAG	5 cut(s)	344, 404, 417, 774, 804
BstENI	CCTNNNNNAGG	1 cut(s)	888
BstF5I	GGATG	5 cut(s)	38, 375, 532, 817, 958
BstFNI	CGCG	1 cut(s)	234
BstH2I	RGCGCY	1 cut(s)	763
BstHHI	GCGC	1 cut(s)	762
BstKTI	GATC	7 cut(s)	54, 273, 604, 861, 874, 949, 970
BstMAI	GTCTC	2 cut(s)	244, 983
BstMBI	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
BstMCI	CGRYCG	1 cut(s)	604
BstMWI	GCNNNNNNNGC	2 cut(s)	422, 449
BstNI	CCWGG	1 cut(s)	398
BstNSI	RCATGY	2 cut(s)	88, 311
BstSCI	CCNGG	2 cut(s)	116, 396
BstUI	CGCG	1 cut(s)	234
BstV1I	GCAGC	2 cut(s)	436, 439
BstV2I	GAAGAC	3 cut(s)	21, 485, 872
BstX2I	RGATCY	1 cut(s)	51
BstYI	RGATCY	1 cut(s)	51
BstZ17I	GTATAC	1 cut(s)	213
BsuI	GTATCC	1 cut(s)	484
BsuRI	GGCC	2 cut(s)	139, 802
BtsCI	GGATG	5 cut(s)	38, 375, 532, 817, 958
BtsIMutI	CAGTG	2 cut(s)	280, 619
BveI	ACCTGC	1 cut(s)	908
Cac8I	GCNNGC	1 cut(s)	701
CciI	TCATGA	2 cut(s)	295, 861
CfoI	GCGC	1 cut(s)	762
Cfr10I	RCCGGY	2 cut(s)	139, 934
Cfr13I	GGNCC	1 cut(s)	920
CseI	GACGC	1 cut(s)	261
Csp6I	GTAC	2 cut(s)	742, 796
CspAI	ACCGGT	1 cut(s)	934
CviAII	CATG	5 cut(s)	85, 296, 308, 634, 862
CviQI	GTAC	2 cut(s)	742, 796
DdeI	CTNAG	5 cut(s)	344, 404, 417, 774, 804
DpnI	GATC	7 cut(s)	53, 272, 603, 860, 873, 948, 969
DpnII	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
Eam1104I	CTCTTC	3 cut(s)	98, 504, 663
EarI	CTCTTC	3 cut(s)	98, 504, 663
EciI	GGCGGA	1 cut(s)	165
Ecl136II	GAGCTC	1 cut(s)	425
Eco130I	CCWWGG	1 cut(s)	134
Eco147I	AGGCCT	1 cut(s)	802
Eco24I	GRGCYC	1 cut(s)	427
Eco31I	GGTCTC	1 cut(s)	983
Eco32I	GATATC	1 cut(s)	610
Eco47I	GGWCC	1 cut(s)	920
Eco47III	AGCGCT	1 cut(s)	761
Eco53kI	GAGCTC	1 cut(s)	425
Eco57I	CTGAAG	1 cut(s)	122
Eco88I	CYCGRG	2 cut(s)	90, 787
EcoICRI	GAGCTC	1 cut(s)	425
EcoNI	CCTNNNNNAGG	1 cut(s)	888
EcoRII	CCWGG	1 cut(s)	396
EcoRV	GATATC	1 cut(s)	610
EcoT14I	CCWWGG	1 cut(s)	134
EcoT38I	GRGCYC	1 cut(s)	427
ErhI	CCWWGG	1 cut(s)	134
Esp3I	CGTCTC	1 cut(s)	244
FaeI	CATG	5 cut(s)	88, 299, 311, 637, 865
FaqI	GGGAC	2 cut(s)	73, 100
FatI	CATG	5 cut(s)	84, 295, 307, 633, 861
FauI	CCCGC	1 cut(s)	516
FbaI	TGATCA	1 cut(s)	946
FblI	GTMKAC	3 cut(s)	212, 750, 779
Fnu4HI	GCNGC	4 cut(s)	109, 150, 450, 453
FokI	GGATG	5 cut(s)	45, 382, 539, 824, 965
FriOI	GRGCYC	1 cut(s)	427
Fsp4HI	GCNGC	4 cut(s)	109, 150, 450, 453
FspBI	CTAG	3 cut(s)	135, 317, 582
GlaI	GCGC	1 cut(s)	761
GluI	GCNGC	4 cut(s)	109, 150, 450, 453
GsuI	CTGGAG	2 cut(s)	187, 666
HaeII	RGCGCY	1 cut(s)	763
HaeIII	GGCC	2 cut(s)	139, 802
HapII	CCGG	3 cut(s)	118, 140, 935
HgaI	GACGC	1 cut(s)	261
HhaI	GCGC	1 cut(s)	762
Hin1I	GRCGYC	1 cut(s)	253
Hin1II	CATG	5 cut(s)	88, 299, 311, 637, 865
Hin6I	GCGC	1 cut(s)	760
HinP1I	GCGC	1 cut(s)	760
HincII	GTYRAC	1 cut(s)	564
HindII	GTYRAC	1 cut(s)	564
HinfI	GANTC	3 cut(s)	299, 585, 716
HpaII	CCGG	3 cut(s)	118, 140, 935
HphI	GGTGA	2 cut(s)	154, 485
Hpy166II	GTNNAC	5 cut(s)	213, 564, 751, 768, 780
Hpy188I	TCNGA	5 cut(s)	102, 270, 360, 420, 924
Hpy8I	GTNNAC	5 cut(s)	213, 564, 751, 768, 780
Hpy99I	CGWCG	2 cut(s)	540, 986
HpyAV	CCTTC	7 cut(s)	154, 230, 266, 370, 552, 802, 1000
HpyCH4III	ACNGT	1 cut(s)	192
HpyCH4V	TGCA	3 cut(s)	287, 307, 431
HpyF10VI	GCNNNNNNNGC	2 cut(s)	422, 449
HpyF3I	CTNAG	5 cut(s)	344, 404, 417, 774, 804
Hsp92I	GRCGYC	1 cut(s)	253
Hsp92II	CATG	5 cut(s)	88, 299, 311, 637, 865
HspAI	GCGC	1 cut(s)	760
Ksp22I	TGATCA	1 cut(s)	946
Kzo9I	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
LguI	GCTCTTC	1 cut(s)	98
LmnI	GCTCC	2 cut(s)	379, 400
Lsp1109I	GCAGC	2 cut(s)	436, 439
LweI	GCATC	1 cut(s)	808
MaeI	CTAG	3 cut(s)	135, 317, 582
MaeIII	GTNAC	1 cut(s)	586
MalI	GATC	7 cut(s)	53, 272, 603, 860, 873, 948, 969
MboI	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
MboII	GAAGA	8 cut(s)	26, 115, 284, 490, 521, 680, 877, 1015
MflI	RGATCY	1 cut(s)	51
MhlI	GDGCHC	1 cut(s)	427
MluCI	AATT	3 cut(s)	281, 335, 621
MlyI	GAGTC	3 cut(s)	293, 594, 710
MmeI	TCCRAC	2 cut(s)	631, 831
MseI	TTAA	2 cut(s)	339, 957
MslI	CAYNNNNRTG	2 cut(s)	83, 294
MspI	CCGG	3 cut(s)	118, 140, 935
MspR9I	CCNGG	2 cut(s)	118, 398
MvaI	CCWGG	1 cut(s)	398
MvnI	CGCG	1 cut(s)	234
MwoI	GCNNNNNNNGC	2 cut(s)	422, 449
NciI	CCSGG	1 cut(s)	118
NdeII	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
NlaIII	CATG	5 cut(s)	88, 299, 311, 637, 865
NlaIV	GGNNCC	1 cut(s)	53
NmuCI	GTSAC	1 cut(s)	586
NspI	RCATGY	2 cut(s)	88, 311
PaeR7I	CTCGAG	1 cut(s)	787
PagI	TCATGA	2 cut(s)	295, 861
PceI	AGGCCT	1 cut(s)	802
PciSI	GCTCTTC	1 cut(s)	98
PinAI	ACCGGT	1 cut(s)	934
PkrI	GCNGC	4 cut(s)	110, 151, 451, 454
Ple19I	CGATCG	1 cut(s)	604
PleI	GAGTC	3 cut(s)	293, 593, 710
PpsI	GAGTC	3 cut(s)	293, 593, 710
Psp124BI	GAGCTC	1 cut(s)	427
Psp6I	CCWGG	1 cut(s)	396
PspGI	CCWGG	1 cut(s)	396
PspN4I	GGNNCC	1 cut(s)	53
PspPI	GGNCC	1 cut(s)	920
PsuI	RGATCY	1 cut(s)	51
PvuI	CGATCG	1 cut(s)	604
RsaI	GTAC	2 cut(s)	743, 797
RsaNI	GTAC	2 cut(s)	742, 796
RseI	CAYNNNNRTG	2 cut(s)	83, 294
SacI	GAGCTC	1 cut(s)	427
SapI	GCTCTTC	1 cut(s)	98
SaqAI	TTAA	2 cut(s)	339, 957
SatI	GCNGC	4 cut(s)	109, 150, 450, 453
Sau3AI	GATC	7 cut(s)	51, 270, 601, 858, 871, 946, 967
Sau96I	GGNCC	1 cut(s)	920
SchI	GAGTC	3 cut(s)	293, 594, 710
ScrFI	CCNGG	2 cut(s)	118, 398
SduI	GDGCHC	1 cut(s)	427
SfaNI	GCATC	1 cut(s)	808
Sfr274I	CTCGAG	1 cut(s)	787
SinI	GGWCC	1 cut(s)	920
SlaI	CTCGAG	1 cut(s)	787
SmiMI	CAYNNNNRTG	2 cut(s)	83, 294
SmlI	CTYRAG	1 cut(s)	787
SmoI	CTYRAG	1 cut(s)	787
SpeI	ACTAGT	1 cut(s)	316
Sse9I	AATT	3 cut(s)	281, 335, 621
SseBI	AGGCCT	1 cut(s)	802
SsiI	CCGC	4 cut(s)	109, 149, 176, 523
SspMI	CTAG	3 cut(s)	135, 317, 582
SstI	GAGCTC	1 cut(s)	427
StuI	AGGCCT	1 cut(s)	802
StyD4I	CCNGG	2 cut(s)	116, 396
StyI	CCWWGG	1 cut(s)	134
TaaI	ACNGT	1 cut(s)	192
TaqI	TCGA	3 cut(s)	538, 788, 981
TasI	AATT	3 cut(s)	281, 335, 621
TatI	WGTACW	2 cut(s)	741, 795
TauI	GCSGC	2 cut(s)	111, 152
Tru1I	TTAA	2 cut(s)	339, 957
Tru9I	TTAA	2 cut(s)	339, 957
TscAI	CASTG	2 cut(s)	280, 619
TseFI	GTSAC	1 cut(s)	586
TseI	GCWGC	2 cut(s)	449, 452
Tsp45I	GTSAC	1 cut(s)	586
TspDTI	ATGAA	4 cut(s)	284, 513, 878, 1016
TspRI	CASTG	2 cut(s)	280, 619
VpaK11BI	GGWCC	1 cut(s)	920
XagI	CCTNNNNNAGG	1 cut(s)	888
XapI	RAATTY	2 cut(s)	281, 335
XceI	RCATGY	2 cut(s)	88, 311
XhoI	CTCGAG	1 cut(s)	787
XmaJI	CCTAGG	1 cut(s)	134
XmiI	GTMKAC	3 cut(s)	212, 750, 779
XspI	CTAG	3 cut(s)	135, 317, 582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.