Rorug05G0005700

Possibly involved in carbohydrate binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0012588
Physical Location & Seq
Forward (+)
362665 .. 365124
2460 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0005700.1

Sequence Viewer

Length: 2100 bp
ATGGCTTATCATGTATCCTCCACACCCTCTTCGCTCTTCCATAACCGCCACACCCTCTCTCACTCTCTCTCTTCCTCCTCTAGAAAGCTCAGGCCAACTAACTCTGATATTCACACCTTCAATCTCACCTTCCCTACACTTCACTCCAGAATTTCTCTCCAAATAAACCATGTTTCTTTACAAGAAACCCAGAGTCCAGATGTCCCAAGCCCAGATGGAAATTCCTCGTCCTCGTCCTCGTCCTCGTCCAAAAGCTATATCTGGGTCAATCCCAGCAGCCCCAGAGCTTCACAGCTCAGGAAGAAATCCTACGATTCCAGGTATGCTTCTTTAGTCAAAGCAGCTGAGTCCTTGAACTCTACTGGTCTAAGTGAAAGTGATGTTATTGGTATTTTAAAGGGTTTAGGTGACAGGGTTTTGGAACAAGATGCCGTGGTTGTTCTCAATAATATGGTTAATCCCGAAAATGCGTTGCTTGTTCTCAACTACTTTCAGCAGAGGTTTAAACCAAAGAGGGAAGTGGTTCTCTATAATGTGACCTTGAAAGTTTTTAGGAAGTGTAAGGATTTGGAGAGAGCAGAGAAGCTGTTTTATGAGATACTTGAGAGAGGTGTTAAACCTGATAATGTTACATTTTCGACTATGATTAGCTGTGCTAGGATGTGTTATCTGCCTGATAAGGCTGTGGAGTGGTTTGAGAAGATGCCTACTTTTGGGTGTAATCCCGATGATGTTACCTATTCGGCTATGATTGACGCATATGGGCGTGCCGGTAATGTTGACAAGGCTTTTAGCTTGTATGACCGCGCTAGGACAGAGAAGTGGCGCATTGATCCAGTGACATTTGCAACGTTGATTAAGATTCACGGGCAATCGGGGAATTATGATGGGTGCTTGAATGTTTACGAGGAAATGAAGGCTATTGGGGTGAAGCCGAACATGGTTATTTATAATACTTTGTTGGATGCTATGGGAAGAGCTAAGAGGCCTTGGCAGGCCAAGAAAATTTTCCGAGAGATGATCAGCAAGGGGTCTTCGCCAAATTGGGTGACCTATGCATCTCTGCTACGGGCCTTTGGTAGAGCTCGCTATGGTGATGATGCTCTCAATGTGTACAAGGAGATGAAGGAGAAGGGAATGGAGTTGAATGTCATTCTCTACAACACCCTTTTGTCTATGTGTGCTGATATTGGCTACACTGATCAAGCTATTGAGATTTTCAAAGACATGAAGAGTTCCGAAACTTGGAAGCCTGATAGTTGGACATTTTCATCCATGATTACCATATATTCCTGTAGCGGGAAAGTCTCAGAGGCAGAGAGGACGTTGAATGAGATGGTGGAAGCTGGTTTCCAGCCTAATATCTTTATTTTGACATCTCTAATACAATGCTATGGGAAGGCCAAGCGTACTGATGATGTTGTCAGGTCATTCAATCAACTACTAGAATTGGGCATAACTCCTGATGAGCGTTTCTGTGGTTGTCTCCTGAATGTGATGACCCAAACACCAAAGGATGAACTATCTAAGCTGACTGATTGCATTGAGCGGGGTAATGAGAAGCTTGGATATGTTGTAAGACTTCTGGTAGAGAAGCAAGACAGTAGTGAAAACTTCAGGAAGGAAGCATCAGAACTTTTTAATTCAGTTGGTTCCGATGTAAAGAAGGCCTACTGCAATTGCTTGATTGATCTTTGTGTGAACCTCGATCTCTTGGAGAGAGCCTGTGAGCTTCTAGACCTGGGGCTTACACTTGAGATATACACAGATATACAGTCAAGGTCTCCAACCCAATGGTCTCTGTATCTCAAGGGTCTCTCTCTTGGGGCAGCCCTTACTGCATTACATGTTTGGATTAATGACTTGTCTCGTTCGCTGGAATCTGGGGAGGAGCTTCCACCTCTGCTTGGAATTAATACCGGACATGGCAAACATAAATATTCAGACAAAGGTCTAGCGAGTGTGTTCGAGTCACATTTGAAGGAAGTAGATGCTCCGTTCCATGAGGCCCCAGACAAGGTTGGCTGGTTTTTGACTACCAAGGTTGCAGTGACGTCATGGTTGGAGTCTAGAAGGTCACCACAAGTAGTTGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
X8

Protein Analysis

699

Amino Acids

78.6

Weight (kDa)

7.16

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 173 - 218 1e-09 PPR repeat family
PPR_2 PF13041 225 - 254 2.9e-06 PPR repeat family
PPR_1 PF12854 239 - 269 4.3e-10 PPR repeat
PPR_2 PF13041 245 - 287 7.9e-07 PPR repeat family
PPR PF01535 245 - 269 5.4e-07 PPR repeat
PPR_long PF17177 256 - 402 1.8e-13 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 276 - 325 1.2e-07 Pentatricopeptide repeat domain
TPR_24 PF23276 290 - 410 1.2e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 309 - 340 1.7e-06 PPR repeat
PPR_2 PF13041 312 - 360 7e-12 PPR repeat family
PPR_3 PF13812 335 - 395 6.2e-12 Pentatricopeptide repeat domain
PPR PF01535 350 - 380 7.6e-06 PPR repeat
PPR_long PF17177 367 - 504 5.3e-13 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 371 - 430 5.8e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 383 - 428 2.7e-09 PPR repeat family
PPR PF01535 422 - 451 8.6e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 951
AatII GACGTC 1 cut(s) 2057
AccBSI CCGCTC 1 cut(s) 1549
AccII CGCG 1 cut(s) 807
AciI CCGC 4 cut(s) 46, 805, 1299, 1549
AclI AACGTT 1 cut(s) 851
AclWI GGATC 1 cut(s) 827
AcsI RAATTY 3 cut(s) 150, 220, 1005
AcuI CTGAAG 1 cut(s) 1600
AcyI GRCGYC 1 cut(s) 2054
AfaI GTAC 2 cut(s) 1115, 1411
AfiI CCNNNNNNNGG 5 cut(s) 713, 1245, 1299, 1907, 2017
AflIII ACRYGT 1 cut(s) 1846
AgsI TTSAA 9 cut(s) 121, 355, 544, 898, 1147, 1222, 1330, 1435, 1981
AjnI CCWGG 2 cut(s) 317, 1740
AjuI GAANNNNNNNTTGG 2 cut(s) 992, 1024
Alw21I GWGCWC 1 cut(s) 1087
Alw26I GTCTC 6 cut(s) 1312, 1490, 1788, 1803, 1820, 1872
AlwI GGATC 1 cut(s) 827
AoxI GGCC 7 cut(s) 92, 986, 996, 1071, 1401, 1668, 2007
ApeKI GCWGC 4 cut(s) 276, 341, 1829, 2093
ApoI RAATTY 3 cut(s) 150, 220, 1005
AseI ATTAAT 2 cut(s) 1857, 1914
Asp700I GAANNNNTTC 2 cut(s) 522, 1007
AspLEI GCGC 2 cut(s) 809, 828
AspS9I GGNCC 2 cut(s) 1071, 2008
AsuHPI GGTGA 6 cut(s) 118, 419, 940, 1060, 1106, 2070
BanII GRGCYC 1 cut(s) 1087
BarI GAAGNNNNNNTAC 2 cut(s) 293, 325
BbsI GAAGAC 1 cut(s) 1026
Bbv12I GWGCWC 1 cut(s) 1087
BbvI GCAGC 4 cut(s) 288, 353, 1841, 2080
BccI CCATC 3 cut(s) 209, 881, 1330
BceAI ACGGC 1 cut(s) 416
BciT130I CCWGG 2 cut(s) 319, 1742
BciVI GTATCC 1 cut(s) 25
BclI TGATCA 2 cut(s) 1020, 1201
BcoDI GTCTC 6 cut(s) 1312, 1490, 1788, 1803, 1820, 1872
BfaI CTAG 7 cut(s) 81, 657, 810, 1445, 1736, 1955, 2070
BfmI CTRYAG 1 cut(s) 1294
BfuI GTATCC 1 cut(s) 25
BisI GCNGC 4 cut(s) 277, 342, 1830, 2094
BlsI GCNGC 4 cut(s) 278, 343, 1831, 2095
Bme1390I CCNGG 2 cut(s) 319, 1742
BmgT120I GGNCC 2 cut(s) 1071, 2008
BmiI GGNNCC 2 cut(s) 1654, 2010
BmrFI CCNGG 2 cut(s) 319, 1742
BmsI GCATC 7 cut(s) 418, 693, 955, 1067, 1090, 1637, 1981
BoxI GACNNNNGTC 1 cut(s) 1950
BpiI GAAGAC 1 cut(s) 1026
BpmI CTGGAG 1 cut(s) 130
Bpu10I CCTNAGC 2 cut(s) 89, 296
BpuEI CTTGAG 3 cut(s) 623, 1775, 1793
BsaHI GRCGYC 1 cut(s) 2054
BsaI GGTCTC 3 cut(s) 1788, 1803, 1820
BsaJI CCNNGG 4 cut(s) 432, 989, 1741, 2040
BsaWI WCCGGW 1 cut(s) 1919
Bsc4I CCNNNNNNNGG 5 cut(s) 713, 1245, 1299, 1907, 2017
Bse118I RCCGGY 1 cut(s) 770
Bse1I ACTGG 2 cut(s) 367, 836
BseBI CCWGG 2 cut(s) 319, 1742
BseDI CCNNGG 4 cut(s) 432, 989, 1741, 2040
BseGI GGATG 4 cut(s) 666, 970, 1271, 1522
BseLI CCNNNNNNNGG 5 cut(s) 713, 1245, 1299, 1907, 2017
BseMII CTCAG 4 cut(s) 103, 310, 336, 1323
BseNI ACTGG 2 cut(s) 367, 836
BseRI GAGGAG 2 cut(s) 67, 1904
BseXI GCAGC 4 cut(s) 288, 353, 1841, 2080
BseYI CCCAGC 1 cut(s) 272
Bsh1236I CGCG 1 cut(s) 807
BshFI GGCC 7 cut(s) 94, 988, 998, 1073, 1403, 1670, 2009
BsiHKAI GWGCWC 1 cut(s) 1087
BsiSI CCGG 2 cut(s) 771, 1920
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 5 cut(s) 713, 1245, 1299, 1907, 2017
BsmAI GTCTC 6 cut(s) 1312, 1490, 1788, 1803, 1820, 1872
BsmFI GGGAC 1 cut(s) 188
BsnI GGCC 7 cut(s) 94, 988, 998, 1073, 1403, 1670, 2009
Bso31I GGTCTC 3 cut(s) 1788, 1803, 1820
Bsp1286I GDGCHC 1 cut(s) 1087
Bsp1407I TGTACA 1 cut(s) 1113
Bsp143I GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
BspACI CCGC 4 cut(s) 46, 805, 1299, 1549
BspANI GGCC 7 cut(s) 94, 988, 998, 1073, 1403, 1670, 2009
BspCNI CTCAG 4 cut(s) 102, 309, 337, 1322
BspFNI CGCG 1 cut(s) 807
BspLI GGNNCC 2 cut(s) 1654, 2010
BspPI GGATC 1 cut(s) 827
BspQI GCTCTTC 2 cut(s) 41, 970
BspTNI GGTCTC 3 cut(s) 1788, 1803, 1820
BsrBI CCGCTC 1 cut(s) 1549
BsrFI RCCGGY 1 cut(s) 770
BsrGI TGTACA 1 cut(s) 1113
BsrI ACTGG 2 cut(s) 367, 836
BssAI RCCGGY 1 cut(s) 770
BssECI CCNNGG 4 cut(s) 432, 989, 1741, 2040
BssMI GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
BssNI GRCGYC 1 cut(s) 2054
BssT1I CCWWGG 2 cut(s) 989, 2040
Bst2UI CCWGG 2 cut(s) 319, 1742
Bst4CI ACNGT 2 cut(s) 1604, 1776
Bst6I CTCTTC 5 cut(s) 34, 41, 76, 970, 1226
BstACI GRCGYC 1 cut(s) 2054
BstAUI TGTACA 1 cut(s) 1113
BstC8I GCNNGC 3 cut(s) 768, 996, 1087
BstDEI CTNAG 8 cut(s) 89, 296, 345, 368, 981, 1309, 1527, 2097
BstDSI CCRYGG 1 cut(s) 432
BstEII GGTNACC 2 cut(s) 1048, 2076
BstF5I GGATG 4 cut(s) 666, 970, 1271, 1522
BstFNI CGCG 1 cut(s) 807
BstHHI GCGC 2 cut(s) 809, 828
BstKTI GATC 5 cut(s) 835, 1023, 1204, 1693, 1711
BstMAI GTCTC 6 cut(s) 1312, 1490, 1788, 1803, 1820, 1872
BstMBI GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
BstMWI GCNNNNNNNGC 1 cut(s) 1838
BstNI CCWGG 2 cut(s) 319, 1742
BstNSI RCATGY 1 cut(s) 1850
BstPAI GACNNNNGTC 1 cut(s) 1950
BstPI GGTNACC 2 cut(s) 1048, 2076
BstSCI CCNGG 2 cut(s) 317, 1740
BstSFI CTRYAG 1 cut(s) 1294
BstUI CGCG 1 cut(s) 807
BstV1I GCAGC 4 cut(s) 288, 353, 1841, 2080
BstV2I GAAGAC 1 cut(s) 1026
BstXI CCANNNNNNTGG 1 cut(s) 1794
BsuI GTATCC 1 cut(s) 25
BsuRI GGCC 7 cut(s) 94, 988, 998, 1073, 1403, 1670, 2009
BtgI CCRYGG 1 cut(s) 432
BtsCI GGATG 4 cut(s) 666, 970, 1271, 1522
BtsI GCAGTG 1 cut(s) 2055
BtsIMutI CAGTG 3 cut(s) 843, 1197, 2055
Cac8I GCNNGC 3 cut(s) 768, 996, 1087
CfoI GCGC 2 cut(s) 809, 828
Cfr10I RCCGGY 1 cut(s) 770
Cfr13I GGNCC 2 cut(s) 1071, 2008
CseI GACGC 1 cut(s) 764
Csp6I GTAC 2 cut(s) 1114, 1410
CviAII CATG 9 cut(s) 11, 170, 940, 1228, 1276, 1847, 1925, 2003, 2058
CviQI GTAC 2 cut(s) 1114, 1410
DdeI CTNAG 8 cut(s) 89, 296, 345, 368, 981, 1309, 1527, 2097
DpnI GATC 5 cut(s) 834, 1022, 1203, 1692, 1710
DpnII GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
DraI TTTAAA 2 cut(s) 396, 505
Eam1104I CTCTTC 5 cut(s) 34, 41, 76, 970, 1226
EarI CTCTTC 5 cut(s) 34, 41, 76, 970, 1226
Ecl136II GAGCTC 1 cut(s) 1085
Eco130I CCWWGG 2 cut(s) 989, 2040
Eco147I AGGCCT 2 cut(s) 988, 1670
Eco24I GRGCYC 1 cut(s) 1087
Eco31I GGTCTC 3 cut(s) 1788, 1803, 1820
Eco53kI GAGCTC 1 cut(s) 1085
Eco57I CTGAAG 1 cut(s) 1600
Eco91I GGTNACC 2 cut(s) 1048, 2076
EcoICRI GAGCTC 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 2008
EcoO65I GGTNACC 2 cut(s) 1048, 2076
EcoRII CCWGG 2 cut(s) 317, 1740
EcoT14I CCWWGG 2 cut(s) 989, 2040
EcoT22I ATGCAT 1 cut(s) 1060
EcoT38I GRGCYC 1 cut(s) 1087
ErhI CCWWGG 2 cut(s) 989, 2040
FaeI CATG 9 cut(s) 14, 173, 943, 1231, 1279, 1850, 1928, 2006, 2061
FaqI GGGAC 1 cut(s) 188
FatI CATG 9 cut(s) 10, 169, 939, 1227, 1275, 1846, 1924, 2002, 2057
FauI CCCGC 2 cut(s) 1292, 1542
FauNDI CATATG 1 cut(s) 760
FbaI TGATCA 2 cut(s) 1020, 1201
Fnu4HI GCNGC 4 cut(s) 277, 342, 1830, 2094
FokI GGATG 4 cut(s) 673, 977, 1258, 1529
FriOI GRGCYC 1 cut(s) 1087
Fsp4HI GCNGC 4 cut(s) 277, 342, 1830, 2094
FspBI CTAG 7 cut(s) 81, 657, 810, 1445, 1736, 1955, 2070
GlaI GCGC 2 cut(s) 808, 827
GluI GCNGC 4 cut(s) 277, 342, 1830, 2094
GsaI CCCAGC 1 cut(s) 276
GsuI CTGGAG 1 cut(s) 130
HaeIII GGCC 7 cut(s) 94, 988, 998, 1073, 1403, 1670, 2009
HapII CCGG 2 cut(s) 771, 1920
HgaI GACGC 1 cut(s) 764
HhaI GCGC 2 cut(s) 809, 828
Hin1I GRCGYC 1 cut(s) 2054
Hin1II CATG 9 cut(s) 14, 173, 943, 1231, 1279, 1850, 1928, 2006, 2061
Hin6I GCGC 2 cut(s) 807, 826
HinP1I GCGC 2 cut(s) 807, 826
HincII GTYRAC 1 cut(s) 781
HindII GTYRAC 1 cut(s) 781
HindIII AAGCTT 1 cut(s) 1562
HinfI GANTC 7 cut(s) 193, 314, 347, 862, 1880, 1970, 2066
HpaII CCGG 2 cut(s) 771, 1920
HphI GGTGA 6 cut(s) 118, 419, 940, 1060, 1106, 2070
Hpy166II GTNNAC 4 cut(s) 781, 904, 1114, 1702
Hpy188I TCNGA 7 cut(s) 106, 1013, 1240, 1312, 1633, 1657, 1945
Hpy8I GTNNAC 4 cut(s) 781, 904, 1114, 1702
HpyCH4III ACNGT 2 cut(s) 1604, 1776
HpyCH4IV ACGT 3 cut(s) 851, 1325, 2054
HpyCH4V TGCA 6 cut(s) 848, 1058, 1542, 1677, 1841, 2048
HpyF10VI GCNNNNNNNGC 1 cut(s) 1838
HpyF3I CTNAG 8 cut(s) 89, 296, 345, 368, 981, 1309, 1527, 2097
HpySE526I ACGT 3 cut(s) 851, 1325, 2054
Hsp92I GRCGYC 1 cut(s) 2054
Hsp92II CATG 9 cut(s) 14, 173, 943, 1231, 1279, 1850, 1928, 2006, 2061
HspAI GCGC 2 cut(s) 807, 826
Ksp22I TGATCA 2 cut(s) 1020, 1201
Kzo9I GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
LguI GCTCTTC 2 cut(s) 41, 970
LmnI GCTCC 2 cut(s) 1891, 1999
Lsp1109I GCAGC 4 cut(s) 288, 353, 1841, 2080
LweI GCATC 7 cut(s) 418, 693, 955, 1067, 1090, 1637, 1981
MaeI CTAG 7 cut(s) 81, 657, 810, 1445, 1736, 1955, 2070
MaeII ACGT 3 cut(s) 851, 1325, 2054
MaeIII GTNAC 9 cut(s) 407, 535, 628, 733, 838, 1048, 1971, 2050, 2076
MalI GATC 5 cut(s) 834, 1022, 1203, 1692, 1710
MbiI CCGCTC 1 cut(s) 1549
MboI GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
MboII GAAGA 8 cut(s) 21, 28, 63, 313, 712, 987, 1026, 1243
MfeI CAATTG 1 cut(s) 1678
MhlI GDGCHC 1 cut(s) 1087
MluCI AATT 9 cut(s) 150, 220, 880, 1005, 1042, 1448, 1642, 1678, 1911
MlyI GAGTC 4 cut(s) 202, 356, 1979, 2075
MmeI TCCRAC 4 cut(s) 942, 1241, 1811, 2043
Mph1103I ATGCAT 1 cut(s) 1060
MroXI GAANNNNTTC 2 cut(s) 522, 1007
MseI TTAA 8 cut(s) 395, 456, 504, 615, 858, 1641, 1857, 1914
MspA1I CMGCKG 1 cut(s) 344
MspI CCGG 2 cut(s) 771, 1920
MspR9I CCNGG 2 cut(s) 319, 1742
MssI GTTTAAAC 1 cut(s) 505
MunI CAATTG 1 cut(s) 1678
MvaI CCWGG 2 cut(s) 319, 1742
MvnI CGCG 1 cut(s) 807
MwoI GCNNNNNNNGC 1 cut(s) 1838
NdeI CATATG 1 cut(s) 760
NdeII GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
NlaIII CATG 9 cut(s) 14, 173, 943, 1231, 1279, 1850, 1928, 2006, 2061
NlaIV GGNNCC 2 cut(s) 1654, 2010
NmuCI GTSAC 7 cut(s) 407, 535, 838, 1048, 1971, 2050, 2076
NsiI ATGCAT 1 cut(s) 1060
NspI RCATGY 1 cut(s) 1850
PceI AGGCCT 2 cut(s) 988, 1670
PciI ACATGT 1 cut(s) 1846
PciSI GCTCTTC 2 cut(s) 41, 970
PdmI GAANNNNTTC 2 cut(s) 522, 1007
PfeI GAWTC 3 cut(s) 314, 862, 1880
PkrI GCNGC 4 cut(s) 278, 343, 1831, 2095
PleI GAGTC 4 cut(s) 201, 355, 1978, 2074
PmeI GTTTAAAC 1 cut(s) 505
PpsI GAGTC 4 cut(s) 201, 355, 1978, 2074
PscI ACATGT 1 cut(s) 1846
PshAI GACNNNNGTC 1 cut(s) 1950
PshBI ATTAAT 2 cut(s) 1857, 1914
PsiI TTATAA 1 cut(s) 951
Psp124BI GAGCTC 1 cut(s) 1087
Psp1406I AACGTT 1 cut(s) 851
Psp6I CCWGG 2 cut(s) 317, 1740
PspEI GGTNACC 2 cut(s) 1048, 2076
PspFI CCCAGC 1 cut(s) 272
PspGI CCWGG 2 cut(s) 317, 1740
PspN4I GGNNCC 2 cut(s) 1654, 2010
PspPI GGNCC 2 cut(s) 1071, 2008
PvuII CAGCTG 1 cut(s) 344
RsaI GTAC 2 cut(s) 1115, 1411
RsaNI GTAC 2 cut(s) 1114, 1410
SacI GAGCTC 1 cut(s) 1087
SapI GCTCTTC 2 cut(s) 41, 970
SaqAI TTAA 8 cut(s) 395, 456, 504, 615, 858, 1641, 1857, 1914
SatI GCNGC 4 cut(s) 277, 342, 1830, 2094
Sau3AI GATC 5 cut(s) 832, 1020, 1201, 1690, 1708
Sau96I GGNCC 2 cut(s) 1071, 2008
SchI GAGTC 4 cut(s) 202, 356, 1979, 2075
ScrFI CCNGG 2 cut(s) 319, 1742
SduI GDGCHC 1 cut(s) 1087
SfaNI GCATC 7 cut(s) 418, 693, 955, 1067, 1090, 1637, 1981
SfcI CTRYAG 1 cut(s) 1294
SmlI CTYRAG 3 cut(s) 602, 1754, 1808
SmoI CTYRAG 3 cut(s) 602, 1754, 1808
Sse9I AATT 9 cut(s) 150, 220, 880, 1005, 1042, 1448, 1642, 1678, 1911
SseBI AGGCCT 2 cut(s) 988, 1670
SsiI CCGC 4 cut(s) 46, 805, 1299, 1549
SspI AATATT 1 cut(s) 1940
SspMI CTAG 7 cut(s) 81, 657, 810, 1445, 1736, 1955, 2070
SstI GAGCTC 1 cut(s) 1087
StuI AGGCCT 2 cut(s) 988, 1670
StyD4I CCNGG 2 cut(s) 317, 1740
StyI CCWWGG 2 cut(s) 989, 2040
TaaI ACNGT 2 cut(s) 1604, 1776
TaiI ACGT 3 cut(s) 854, 1328, 2057
TaqI TCGA 3 cut(s) 638, 1707, 1968
TasI AATT 9 cut(s) 150, 220, 880, 1005, 1042, 1448, 1642, 1678, 1911
TatI WGTACW 1 cut(s) 1113
TfiI GAWTC 3 cut(s) 314, 862, 1880
Tru1I TTAA 8 cut(s) 395, 456, 504, 615, 858, 1641, 1857, 1914
Tru9I TTAA 8 cut(s) 395, 456, 504, 615, 858, 1641, 1857, 1914
TscAI CASTG 3 cut(s) 843, 1204, 2055
TseFI GTSAC 7 cut(s) 407, 535, 838, 1048, 1971, 2050, 2076
TseI GCWGC 4 cut(s) 276, 341, 1829, 2093
Tsp45I GTSAC 7 cut(s) 407, 535, 838, 1048, 1971, 2050, 2076
TspDTI ATGAA 5 cut(s) 929, 1139, 1244, 1260, 1533
TspGWI ACGGA 1 cut(s) 1986
TspRI CASTG 3 cut(s) 843, 1204, 2055
VspI ATTAAT 2 cut(s) 1857, 1914
XapI RAATTY 3 cut(s) 150, 220, 1005
XbaI TCTAGA 3 cut(s) 80, 1735, 2069
XceI RCATGY 1 cut(s) 1850
XmnI GAANNNNTTC 2 cut(s) 522, 1007
XspI CTAG 7 cut(s) 81, 657, 810, 1445, 1736, 1955, 2070
ZraI GACGTC 1 cut(s) 2055
Zsp2I ATGCAT 1 cut(s) 1060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.