Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003767

Physical Location & Seq

Genomic Coordinates Reverse (-)

7254783 .. 7258508

Gene Structure 3726 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0084300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGAGGAAGGTGATGAGAGGATTAGAGGGGGGCTCAATTTGTCGACATCTTAAGCCCAACCCCAATAGTAGGAGTAGCACCACGAGTCCACGACCACCTCCACCAGAGAAGGAGAGAGAGCTCGTATTGGCGGAGATGGCGACGGACCCAAAACCAAGACGGCTGAGGGGTCACAAGGCCACCGCCACGTGTTGTATCGCCTCAGTTGCCACCCCTGGCCTCGTTGCCACTGCCGCCGAGGATGGTTGTGTTTGCTGGTTTGATATGAGATGCAAAGAAGTGATAGAGACTATGGAGGTGGGAAATGAAGCTGTTACATCGTTATGCTTCAAGCCAGGGAATGAAAATGTGGTTTATGTGTCATCCGGGAAGGAAGTTAAGAACTTTGATGTGCGTCTGGGGAGTTCTTGCTCGTGGAAGGTGCTGGAGAGTTTTGAGTATAATAAAGAGGAGATAAATCAGATTGCATGCAGCTCTAAGGCTTCTTTTCTTGCTGCTGCCGATGATGGCGGTGATATTAAGATTGTTGACATTCGCCAGCAGCGCATTTACAAAACATTAAGAGCTGATACTGGTCATACAAGTATATGTAGCAGCGTGCAATTTCTCCCTTGGAGACCTTGGGAAGTTATTACTGGAGGTCTCGATTCGAAGCTAGTGATGTGGGACTTTTCCAAGGGGCGCCCAAACAAAATAATAAATTTTGGTTTGTTTGATGTAAATAATGGTGGTGAGCAGTGTCTTAATCCTGCCTTTGTCCATGCAATAGCAGTTCCAGAAATTGATATGCTAGACAAATCAGACAAGGTTTGTGTTGTGGCTCGGGGTGATGGTGCAGTTGACGTGATTAATGTTGAAGCTGAACTTGATTCTGTAAGGTCGAAAGGTTCTACAAAACCTCGGAAAGGATCTCAATCAAGATCCAAAAACACCGATCTGGAAATCCAAGATCAAAATAGAAGGAATAGATTGCATTTGGATTACTCATCAGGCGGTCATACTGCTGCTGTGTCTTGCGTGGCATTTTCGTTATTTGGGGAAAGAGGAAGATTTATAGTTTCAGGCGGAAACGACAGGCTGGTAAAGGTCTGGGATTGGACCAGGTATCTTGATGCAGAACAAACTAGCGGCAGTGGTGATCTTCTACATTTGAATATCGACCACAGCAAAAAAGTCAACTGGCTGTGTACCACTCCAGGTGATGTGGAAAACCTAGTTGTTTGTGATACAACTAAGGTGGTAAAGGTCTACTCTGTTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

420

Amino Acids

46.2

Weight (kDa)

7.85

Isoelectric Point (pI)

31.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_1st	PF25173	37 - 131	1.2e-07	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	51 - 228	1.2e-17	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	62 - 233	4.6e-15	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	62 - 203	1e-11	Prp19 WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	63 - 224	2.7e-08	WDR36/Utp21 first beta-propeller
Beta-prop_WDR5	PF25175	103 - 233	9.3e-13	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	147 - 223	5.7e-07	Echinoderm microtubule-associated protein second beta-propeller
WD40	PF00400	332 - 365	1.3e-06	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	333 - 419	4.1e-06	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30670 AT2G34820
fragaria_vesca	FvH4_3g11190 FvH4_3g14980 FvH4_3g14980
malus_domestica	MD05G1228100.v1.1 MD05G1228800.v1.1 MD05G1265500.v1.1 MD10G1243500.v1.1
prunus_persica	Prupe.4G100400_v2.0.a1 Prupe.4G134200_v2.0.a1
pyrus_communis	pycom05g24960
rosa_chinensis	RchiOBHm_Chr5g0018101 RchiOBHm_Chr5g0024601
rosa_laevigata	RLG00000032340 RLG00000032809
rosa_multiflora	Rmu_sc0005699.1_g000003 Rmu_sc0010280.1_g000020 Rmu_sc0016842.1_g000001
rosa_roxburghii	Rroxscaffold_1G00054660 Rroxscaffold_1G00059520
rosa_rugosa	Rorug05G0040500.1 Rorug05G0040600 Rorug05G0084300
rosa_samantha	Rh5AG133200 Rh5AG176000 Rh5BG131800 Rh5BG173300 Rh5CG143800 Rh5CG189300 Rh5DG133500 Rh5DG174900
rosa_wichuraiana	Rw5G011610 Rw5G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	681
AccI	GTMKAC	2 cut(s)	43, 1248
AciI	CCGC	7 cut(s)	131, 183, 234, 510, 993, 1065, 1128
AclWI	GGATC	2 cut(s)	915, 916
AcsI	RAATTY	1 cut(s)	700
AcvI	CACGTG	1 cut(s)	189
AcyI	GRCGYC	1 cut(s)	682
AfaI	GTAC	1 cut(s)	1189
AfiI	CCNNNNNNNGG	2 cut(s)	69, 905
AflII	CTTAAG	1 cut(s)	50
AflIII	ACRYGT	1 cut(s)	188
AgsI	TTSAA	3 cut(s)	331, 857, 1153
AjiI	CACGTC	1 cut(s)	844
AjnI	CCWGG	4 cut(s)	214, 334, 1100, 1195
AluBI	AGCT	6 cut(s)	121, 311, 474, 566, 655, 860
AluI	AGCT	6 cut(s)	121, 311, 474, 566, 655, 860
Alw21I	GWGCWC	1 cut(s)	123
Alw26I	GTCTC	3 cut(s)	281, 610, 647
AlwI	GGATC	2 cut(s)	915, 916
Ama87I	CYCGRG	1 cut(s)	822
AoxI	GGCC	2 cut(s)	177, 217
ApeKI	GCWGC	6 cut(s)	471, 494, 497, 541, 594, 1004
ApoI	RAATTY	1 cut(s)	700
AseI	ATTAAT	1 cut(s)	849
AspLEI	GCGC	2 cut(s)	546, 684
AspS9I	GGNCC	2 cut(s)	145, 1098
AsuC2I	CCSGG	1 cut(s)	367
AsuHPI	GGTGA	6 cut(s)	22, 524, 743, 839, 1148, 1211
AsuII	TTCGAA	1 cut(s)	650
AvaI	CYCGRG	1 cut(s)	822
AvaII	GGWCC	2 cut(s)	145, 1098
BanI	GGYRCC	1 cut(s)	681
BanII	GRGCYC	2 cut(s)	35, 123
BauI	CACGAG	2 cut(s)	82, 412
BbrPI	CACGTG	1 cut(s)	189
Bbv12I	GWGCWC	1 cut(s)	123
BbvCI	CCTCAGC	1 cut(s)	164
BbvI	GCAGC	6 cut(s)	481, 483, 484, 553, 606, 991
BccI	CCATC	4 cut(s)	130, 236, 500, 824
BceAI	ACGGC	1 cut(s)	176
BciT130I	CCWGG	4 cut(s)	216, 336, 1102, 1197
BcnI	CCSGG	1 cut(s)	367
BcoDI	GTCTC	3 cut(s)	281, 610, 647
BfaI	CTAG	4 cut(s)	656, 791, 1125, 1214
BfoI	RGCGCY	1 cut(s)	685
BfrI	CTTAAG	1 cut(s)	50
BisI	GCNGC	8 cut(s)	234, 472, 495, 498, 542, 595, 1005, 1129
BlsI	GCNGC	8 cut(s)	235, 473, 496, 499, 543, 596, 1006, 1130
Bme1390I	CCNGG	5 cut(s)	216, 336, 367, 1102, 1197
Bme18I	GGWCC	2 cut(s)	145, 1098
BmeT110I	CYCGRG	1 cut(s)	822
BmgBI	CACGTC	1 cut(s)	844
BmgT120I	GGNCC	2 cut(s)	145, 1098
BmiI	GGNNCC	2 cut(s)	147, 683
BmrFI	CCNGG	5 cut(s)	216, 336, 367, 1102, 1197
BmsI	GCATC	2 cut(s)	260, 1102
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	3 cut(s)	446, 657, 1179
Bpu10I	CCTNAGC	1 cut(s)	164
Bpu14I	TTCGAA	1 cut(s)	650
BpuMI	CCSGG	1 cut(s)	367
BsaAI	YACGTR	1 cut(s)	189
BsaBI	GATNNNNATC	1 cut(s)	913
BsaHI	GRCGYC	1 cut(s)	682
BsaI	GGTCTC	2 cut(s)	610, 647
BsaJI	CCNNGG	7 cut(s)	214, 237, 335, 611, 620, 675, 899
Bsc4I	CCNNNNNNNGG	2 cut(s)	69, 905
Bse1I	ACTGG	3 cut(s)	577, 640, 1184
Bse8I	GATNNNNATC	1 cut(s)	913
BseBI	CCWGG	4 cut(s)	216, 336, 1102, 1197
BseDI	CCNNGG	7 cut(s)	214, 237, 335, 611, 620, 675, 899
BseGI	GGATG	2 cut(s)	247, 362
BseJI	GATNNNNATC	1 cut(s)	913
BseLI	CCNNNNNNNGG	2 cut(s)	69, 905
BseMII	CTCAG	2 cut(s)	155, 216
BseNI	ACTGG	3 cut(s)	577, 640, 1184
BseRI	GAGGAG	1 cut(s)	464
BseXI	GCAGC	6 cut(s)	481, 483, 484, 553, 606, 991
BsgI	GTGCAG	1 cut(s)	855
BshFI	GGCC	2 cut(s)	179, 219
BshNI	GGYRCC	1 cut(s)	681
BsiHKAI	GWGCWC	1 cut(s)	123
BsiHKCI	CYCGRG	1 cut(s)	822
BsiSI	CCGG	1 cut(s)	366
BslFI	GGGAC	1 cut(s)	680
BslI	CCNNNNNNNGG	2 cut(s)	69, 905
BsmAI	GTCTC	3 cut(s)	281, 610, 647
BsmFI	GGGAC	1 cut(s)	680
BsnI	GGCC	2 cut(s)	179, 219
Bso31I	GGTCTC	2 cut(s)	610, 647
BsoBI	CYCGRG	1 cut(s)	822
Bsp119I	TTCGAA	1 cut(s)	650
Bsp1286I	GDGCHC	2 cut(s)	35, 123
Bsp143I	GATC	5 cut(s)	908, 920, 934, 949, 1138
BspACI	CCGC	7 cut(s)	131, 183, 234, 510, 993, 1065, 1128
BspANI	GGCC	2 cut(s)	179, 219
BspCNI	CTCAG	2 cut(s)	156, 215
BspLI	GGNNCC	2 cut(s)	147, 683
BspPI	GGATC	2 cut(s)	915, 916
BspT104I	TTCGAA	1 cut(s)	650
BspT107I	GGYRCC	1 cut(s)	681
BspTI	CTTAAG	1 cut(s)	50
BspTNI	GGTCTC	2 cut(s)	610, 647
BsrI	ACTGG	3 cut(s)	577, 640, 1184
BssECI	CCNNGG	7 cut(s)	214, 237, 335, 611, 620, 675, 899
BssMI	GATC	5 cut(s)	908, 920, 934, 949, 1138
BssNI	GRCGYC	1 cut(s)	682
BssSI	CACGAG	2 cut(s)	82, 412
BssT1I	CCWWGG	3 cut(s)	611, 620, 675
Bst2BI	CACGAG	2 cut(s)	82, 412
Bst2UI	CCWGG	4 cut(s)	216, 336, 1102, 1197
BstACI	GRCGYC	1 cut(s)	682
BstAFI	CTTAAG	1 cut(s)	50
BstBAI	YACGTR	1 cut(s)	189
BstBI	TTCGAA	1 cut(s)	650
BstC8I	GCNNGC	3 cut(s)	469, 539, 599
BstDEI	CTNAG	4 cut(s)	164, 202, 477, 1233
BstENI	CCTNNNNNAGG	1 cut(s)	903
BstF5I	GGATG	2 cut(s)	247, 362
BstH2I	RGCGCY	1 cut(s)	685
BstHHI	GCGC	2 cut(s)	546, 684
BstKTI	GATC	5 cut(s)	911, 923, 937, 952, 1141
BstMAI	GTCTC	3 cut(s)	281, 610, 647
BstMBI	GATC	5 cut(s)	908, 920, 934, 949, 1138
BstMWI	GCNNNNNNNGC	4 cut(s)	137, 206, 233, 543
BstNI	CCWGG	4 cut(s)	216, 336, 1102, 1197
BstNSI	RCATGY	1 cut(s)	471
BstSCI	CCNGG	5 cut(s)	214, 334, 365, 1100, 1195
BstV1I	GCAGC	6 cut(s)	481, 483, 484, 553, 606, 991
BstX2I	RGATCY	2 cut(s)	908, 920
BstYI	RGATCY	2 cut(s)	908, 920
BsuRI	GGCC	2 cut(s)	179, 219
BtrI	CACGTC	1 cut(s)	844
BtsCI	GGATG	2 cut(s)	247, 362
BtsI	GCAGTG	3 cut(s)	228, 743, 1138
BtsIMutI	CAGTG	3 cut(s)	228, 743, 1138
Cac8I	GCNNGC	3 cut(s)	469, 539, 599
CfoI	GCGC	2 cut(s)	546, 684
Cfr13I	GGNCC	2 cut(s)	145, 1098
CseI	GACGC	1 cut(s)	383
CsiI	ACCWGGT	1 cut(s)	1100
Csp6I	GTAC	1 cut(s)	1188
CspCI	CAANNNNNGTGG	2 cut(s)	1218, 1253
CviAII	CATG	2 cut(s)	468, 761
CviQI	GTAC	1 cut(s)	1188
DdeI	CTNAG	4 cut(s)	164, 202, 477, 1233
DinI	GGCGCC	1 cut(s)	683
DpnI	GATC	5 cut(s)	910, 922, 936, 951, 1140
DpnII	GATC	5 cut(s)	908, 920, 934, 949, 1138
EciI	GGCGGA	2 cut(s)	146, 1080
Ecl136II	GAGCTC	1 cut(s)	121
Eco130I	CCWWGG	3 cut(s)	611, 620, 675
Eco24I	GRGCYC	2 cut(s)	35, 123
Eco31I	GGTCTC	2 cut(s)	610, 647
Eco47I	GGWCC	2 cut(s)	145, 1098
Eco53kI	GAGCTC	1 cut(s)	121
Eco72I	CACGTG	1 cut(s)	189
Eco88I	CYCGRG	1 cut(s)	822
EcoICRI	GAGCTC	1 cut(s)	121
EcoNI	CCTNNNNNAGG	1 cut(s)	903
EcoRII	CCWGG	4 cut(s)	214, 334, 1100, 1195
EcoT14I	CCWWGG	3 cut(s)	611, 620, 675
EcoT38I	GRGCYC	2 cut(s)	35, 123
EgeI	GGCGCC	1 cut(s)	683
EheI	GGCGCC	1 cut(s)	683
ErhI	CCWWGG	3 cut(s)	611, 620, 675
FaeI	CATG	2 cut(s)	471, 764
FalI	AAGNNNNNCTT	2 cut(s)	849, 881
FaqI	GGGAC	1 cut(s)	680
FatI	CATG	2 cut(s)	467, 760
FblI	GTMKAC	2 cut(s)	43, 1248
Fnu4HI	GCNGC	8 cut(s)	234, 472, 495, 498, 542, 595, 1005, 1129
FokI	GGATG	2 cut(s)	254, 349
FriOI	GRGCYC	2 cut(s)	35, 123
Fsp4HI	GCNGC	8 cut(s)	234, 472, 495, 498, 542, 595, 1005, 1129
FspBI	CTAG	4 cut(s)	656, 791, 1125, 1214
GlaI	GCGC	2 cut(s)	545, 683
GluI	GCNGC	8 cut(s)	234, 472, 495, 498, 542, 595, 1005, 1129
GsuI	CTGGAG	3 cut(s)	446, 657, 1179
HaeII	RGCGCY	1 cut(s)	685
HaeIII	GGCC	2 cut(s)	179, 219
HapII	CCGG	1 cut(s)	366
HgaI	GACGC	1 cut(s)	383
HhaI	GCGC	2 cut(s)	546, 684
Hin1I	GRCGYC	1 cut(s)	682
Hin1II	CATG	2 cut(s)	471, 764
Hin6I	GCGC	2 cut(s)	544, 682
HinP1I	GCGC	2 cut(s)	544, 682
HincII	GTYRAC	4 cut(s)	44, 529, 841, 1177
HindII	GTYRAC	4 cut(s)	44, 529, 841, 1177
HinfI	GANTC	3 cut(s)	85, 647, 869
HpaII	CCGG	1 cut(s)	366
HphI	GGTGA	6 cut(s)	22, 524, 743, 839, 1148, 1211
Hpy166II	GTNNAC	7 cut(s)	44, 89, 529, 841, 1177, 1188, 1249
Hpy188I	TCNGA	3 cut(s)	462, 802, 903
Hpy188III	TCNNGA	5 cut(s)	644, 776, 918, 938, 1109
Hpy8I	GTNNAC	7 cut(s)	44, 89, 529, 841, 1177, 1188, 1249
Hpy99I	CGWCG	1 cut(s)	145
HpyAV	CCTTC	4 cut(s)	103, 364, 412, 954
HpyCH4IV	ACGT	2 cut(s)	188, 843
HpyCH4V	TGCA	9 cut(s)	273, 467, 471, 601, 764, 836, 973, 1115, 1259
HpyF10VI	GCNNNNNNNGC	4 cut(s)	137, 206, 233, 543
HpyF3I	CTNAG	4 cut(s)	164, 202, 477, 1233
HpySE526I	ACGT	2 cut(s)	188, 843
Hsp92I	GRCGYC	1 cut(s)	682
Hsp92II	CATG	2 cut(s)	471, 764
HspAI	GCGC	2 cut(s)	544, 682
KasI	GGCGCC	1 cut(s)	681
Kzo9I	GATC	5 cut(s)	908, 920, 934, 949, 1138
Lsp1109I	GCAGC	6 cut(s)	481, 483, 484, 553, 606, 991
LweI	GCATC	2 cut(s)	260, 1102
MabI	ACCWGGT	1 cut(s)	1100
MaeI	CTAG	4 cut(s)	656, 791, 1125, 1214
MaeII	ACGT	2 cut(s)	188, 843
MaeIII	GTNAC	2 cut(s)	170, 313
MalI	GATC	5 cut(s)	910, 922, 936, 951, 1140
MboI	GATC	5 cut(s)	908, 920, 934, 949, 1138
MboII	GAAGA	2 cut(s)	1059, 1133
MflI	RGATCY	2 cut(s)	908, 920
MhlI	GDGCHC	2 cut(s)	35, 123
MluCI	AATT	4 cut(s)	36, 602, 700, 780
Mly113I	GGCGCC	1 cut(s)	682
MlyI	GAGTC	1 cut(s)	94
MseI	TTAA	6 cut(s)	51, 378, 519, 560, 744, 849
MslI	CAYNNNNRTG	1 cut(s)	322
MspCI	CTTAAG	1 cut(s)	50
MspI	CCGG	1 cut(s)	366
MspR9I	CCNGG	5 cut(s)	216, 336, 367, 1102, 1197
MvaI	CCWGG	4 cut(s)	216, 336, 1102, 1197
MwoI	GCNNNNNNNGC	4 cut(s)	137, 206, 233, 543
NarI	GGCGCC	1 cut(s)	682
NciI	CCSGG	1 cut(s)	367
NdeII	GATC	5 cut(s)	908, 920, 934, 949, 1138
NlaIII	CATG	2 cut(s)	471, 764
NlaIV	GGNNCC	2 cut(s)	147, 683
NmeAIII	GCCGAG	1 cut(s)	262
NmuCI	GTSAC	1 cut(s)	170
NspI	RCATGY	1 cut(s)	471
NspV	TTCGAA	1 cut(s)	650
PaeI	GCATGC	1 cut(s)	471
PfeI	GAWTC	2 cut(s)	647, 869
PfoI	TCCNGGA	1 cut(s)	365
PkrI	GCNGC	8 cut(s)	235, 473, 496, 499, 543, 596, 1006, 1130
PleI	GAGTC	1 cut(s)	93
PluTI	GGCGCC	1 cut(s)	685
PmaCI	CACGTG	1 cut(s)	189
PmlI	CACGTG	1 cut(s)	189
PpsI	GAGTC	1 cut(s)	93
Ppu21I	YACGTR	1 cut(s)	189
PshBI	ATTAAT	1 cut(s)	849
Psp124BI	GAGCTC	1 cut(s)	123
Psp6I	CCWGG	4 cut(s)	214, 334, 1100, 1195
PspCI	CACGTG	1 cut(s)	189
PspGI	CCWGG	4 cut(s)	214, 334, 1100, 1195
PspN4I	GGNNCC	2 cut(s)	147, 683
PspPI	GGNCC	2 cut(s)	145, 1098
PsuI	RGATCY	2 cut(s)	908, 920
RsaI	GTAC	1 cut(s)	1189
RsaNI	GTAC	1 cut(s)	1188
RseI	CAYNNNNRTG	1 cut(s)	322
SacI	GAGCTC	1 cut(s)	123
SalI	GTCGAC	1 cut(s)	42
SaqAI	TTAA	6 cut(s)	51, 378, 519, 560, 744, 849
SatI	GCNGC	8 cut(s)	234, 472, 495, 498, 542, 595, 1005, 1129
Sau3AI	GATC	5 cut(s)	908, 920, 934, 949, 1138
Sau96I	GGNCC	2 cut(s)	145, 1098
SchI	GAGTC	1 cut(s)	94
ScrFI	CCNGG	5 cut(s)	216, 336, 367, 1102, 1197
SduI	GDGCHC	2 cut(s)	35, 123
SexAI	ACCWGGT	1 cut(s)	1100
SfaNI	GCATC	2 cut(s)	260, 1102
SfoI	GGCGCC	1 cut(s)	683
SfuI	TTCGAA	1 cut(s)	650
SinI	GGWCC	2 cut(s)	145, 1098
SmiMI	CAYNNNNRTG	1 cut(s)	322
SmlI	CTYRAG	1 cut(s)	50
SmoI	CTYRAG	1 cut(s)	50
SphI	GCATGC	1 cut(s)	471
Sse9I	AATT	4 cut(s)	36, 602, 700, 780
SsiI	CCGC	7 cut(s)	131, 183, 234, 510, 993, 1065, 1128
SspDI	GGCGCC	1 cut(s)	681
SspMI	CTAG	4 cut(s)	656, 791, 1125, 1214
SstI	GAGCTC	1 cut(s)	123
StyD4I	CCNGG	5 cut(s)	214, 334, 365, 1100, 1195
StyI	CCWWGG	3 cut(s)	611, 620, 675
TaiI	ACGT	2 cut(s)	191, 846
TaqI	TCGA	5 cut(s)	43, 645, 650, 881, 1158
TasI	AATT	4 cut(s)	36, 602, 700, 780
TauI	GCSGC	2 cut(s)	236, 1131
TfiI	GAWTC	2 cut(s)	647, 869
Tru1I	TTAA	6 cut(s)	51, 378, 519, 560, 744, 849
Tru9I	TTAA	6 cut(s)	51, 378, 519, 560, 744, 849
TscAI	CASTG	3 cut(s)	235, 743, 1138
TseFI	GTSAC	1 cut(s)	170
TseI	GCWGC	6 cut(s)	471, 494, 497, 541, 594, 1004
Tsp45I	GTSAC	1 cut(s)	170
TspDTI	ATGAA	2 cut(s)	321, 357
TspGWI	ACGGA	1 cut(s)	158
TspRI	CASTG	3 cut(s)	235, 743, 1138
Vha464I	CTTAAG	1 cut(s)	50
VpaK11BI	GGWCC	2 cut(s)	145, 1098
VspI	ATTAAT	1 cut(s)	849
XagI	CCTNNNNNAGG	1 cut(s)	903
XapI	RAATTY	1 cut(s)	700
XceI	RCATGY	1 cut(s)	471
XmiI	GTMKAC	2 cut(s)	43, 1248
XspI	CTAG	4 cut(s)	656, 791, 1125, 1214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.