Rorug05G0247100

thylakoid lumenal P17.1 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0011190
Physical Location & Seq
Reverse (-)
26861577 .. 27094294
232718 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0247100.1

Sequence Viewer

Length: 2487 bp
ATGAGTTCCAGTATCGAAGCGTTTATCCAGATATTGGTTCTCTTCCTTCTTCTCCCCTCTAGCATCTGCCAGCTTCCCCTTGACGCCCTTACGCTAGACCGTCCCATCAGAGTCGACGGCGACGTTTTAGTCTCTAGCAACCAAATCTTTGTACTAGGGTTCTTCAGCCCCGGAAATTCTGGGCACCGCTACGCTGGAGTTTGGTATAACAAGATTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAGACAACCCAGTCAATGATTCCTATGGAGTGCTATCGATCAACGGTGATGGAGGCCTAGTCATACATGGAAAGGACCCAACTACCCCTCTTTGGTCCGCCAACGTTACTCTCTCTTCACCAAACAATTTCACAGCGAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTTGATTACCCCTCAGATACACTGCTTCCCTATATGAAGATTGGGCTGAACCGGCGGTCCGGGTTGGAGAAGCACCTAACATCTTGGAAATCAAAAGATGACCCGGGAACCGGGAGTTTTACATGTGGGATAGACCCGATGGGGGTTCCGCAGGTGTTTCTGCGCAAGGGTAGAGAAGCATTGTGGCGGGGCGGCCCTTGGACTGGGGACAGAATGAGCGGTACTGTTGGACACTACAATTCAAGTTTTGTCAACAATGAAGACGAGATATCCTTCGTGTATTTTGATGCTGAGGACTCACAGATCACAAGGGCGGTGCTAGATGAATCAGGAATACTTCAATCGCTGGCATGGAATGATCAATGGATCAAATTATACTACTACCCGACTGGGGGCTGTGATTCCTATGGACAGTGCGGTCCAAATACTAACTGTGATCCATACAAGGACTATAAGTTGGCTTGCACCTGCCTACCTGGGTTCGAATCCATATCACCTAGATTGGGTCCTGGTGAGGGTGGGTGCATTAGGAAAGCGGAAGCCTCCACATGTCAACATGGAGAAGGGTTCGTGAAGGTGGCGAGTGTAAAATTACCGGACTCGTCTACGGCACGTGTGAACATGAGCACGAGTTTGGAAGAGTGCAGACAAAAGTGCTTGATGGATTGTTCTTGCACATCATACACGAGTGCGGACCACCGGGGCGGTGGGGTCGGGTGTTTGACATGGCACGGGGACTTGATGGACACGAGGACTTTTTCCTGTGTTGGTCAAGATTTATATGTTCGAGTCGATGCAACTTCTTTAGCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTTGGATCTGTTACTATTTTTATTCTCTTACTTACCCCTTATTGGTTGGTAAAGATGAAGATGAAAGGTAAGCGTAGGCAAAATAAATATTCATTTGAACTTACTGCTGGGTCAACCTACTTCGAAGAAGCTACTGGTGGATTAGCTCTTGATGATAGTAAAATAAACTCGGAGTTACTATTATTTCATCTAAACACCGTAGCCACTGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCCGTTTATAAGGGGATACTTTATGATGGAAAGGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTTTTCTAATTGCAAAACTCCAACACAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAGGAGAGCACTTTTAAGTTGGACAAGACGCTTCGAGATTATCTTGGGGATTGCTAGAGGCTTATTATATCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAATACAAATCGTGTGGTTGGAACATATGGTTATATGTCGCCGGAATATGCAATGCAAGGACTGTTTTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTGTTGCTAGAAATCATTACTGGCAAAAAGAATGCTAGTTCCTATGAGAACTATCCATACTCAAATTTGATTGGACATGTTTGGGAGTTGTGGAAAGAAGGCAGAGCCGTGGAAATCATTGATTCATCTATAGGTGAATCTTACCCTGTTAGTGAAATTATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTCGCGACTGATCGGCCAACCATGTCGGCAGTTGTTTCAATGTTAAGTAATGATGCAGCTCTTCCTTCACCAAGACGACCCGCATTTTTACTGAAGACAATGAGTCCTAGTGGAGACCCATCCAGCAACAAAGGAGTTTGTTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

828

Amino Acids

91.54

Weight (kDa)

6.14

Isoelectric Point (pI)

43.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 180 8.2e-34 D-mannose binding lectin
S_locus_glycop PF00954 212 - 313 1.3e-17 S-locus glycoprotein domain
PAN_2 PF08276 334 - 400 5.8e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 513 - 783 2.1e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 513 - 780 2.1e-43 Protein kinase domain
DUF3403 PF11883 784 - 828 2.8e-08 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1581, 2267
AarI CACCTGC 2 cut(s) 592, 926
AasI GACNNNNNNGTC 3 cut(s) 128, 257, 867
Acc16I TGCGCA 1 cut(s) 614
Acc36I ACCTGC 2 cut(s) 592, 926
AccB1I GGYRCC 1 cut(s) 183
AccB7I CCANNNNNTGG 2 cut(s) 34, 234
AccBSI CCGCTC 1 cut(s) 669
AccI GTMKAC 2 cut(s) 114, 1055
AccII CGCG 1 cut(s) 2309
AclI AACGTT 1 cut(s) 351
AclWI GGATC 3 cut(s) 824, 881, 1327
AcoI YGGCCR 2 cut(s) 1639, 2318
AcsI RAATTY 3 cut(s) 175, 2170, 2303
AcuI CTGAAG 3 cut(s) 148, 2022, 2417
AcvI CACGTG 1 cut(s) 1064
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 3 cut(s) 153, 673, 2467
AflIII ACRYGT 5 cut(s) 572, 998, 1063, 2182, 2462
AhdI GACNNNNNGTC 1 cut(s) 2406
AjnI CCWGG 2 cut(s) 925, 958
AjuI GAANNNNNNNTTGG 4 cut(s) 1536, 1551, 1568, 1583
AleI CACNNNNGTG 1 cut(s) 2290
AloI GAACNNNNNNTCC 2 cut(s) 491, 523
AluBI AGCT 8 cut(s) 73, 388, 1259, 1445, 1460, 1552, 2363, 2480
AluI AGCT 8 cut(s) 73, 388, 1259, 1445, 1460, 1552, 2363, 2480
Alw21I GWGCWC 2 cut(s) 1079, 1813
Alw26I GTCTC 3 cut(s) 136, 243, 2412
AlwI GGATC 3 cut(s) 824, 881, 1327
Ama87I CYCGRG 1 cut(s) 553
AoxI GGCC 5 cut(s) 301, 643, 1639, 1917, 2318
ApeKI GCWGC 1 cut(s) 2360
ApoI RAATTY 3 cut(s) 175, 2170, 2303
Asp700I GAANNNNTTC 1 cut(s) 1671
AspLEI GCGC 1 cut(s) 615
AspS9I GGNCC 7 cut(s) 322, 342, 507, 644, 869, 956, 1144
AsuC2I CCSGG 6 cut(s) 171, 511, 554, 555, 562, 1151
AsuHPI GGTGA 6 cut(s) 305, 357, 936, 974, 2252, 2364
AsuII TTCGAA 2 cut(s) 933, 1437
AvaI CYCGRG 1 cut(s) 553
AvaII GGWCC 6 cut(s) 322, 342, 507, 869, 956, 1144
BaeGI GKGCMC 1 cut(s) 186
BalI TGGCCA 1 cut(s) 1641
BanI GGYRCC 1 cut(s) 183
BauI CACGAG 3 cut(s) 1078, 1135, 1198
BbrPI CACGTG 1 cut(s) 1064
BbsI GAAGAC 2 cut(s) 717, 2405
Bbv12I GWGCWC 2 cut(s) 1079, 1813
BbvCI CCTCAGC 1 cut(s) 741
BbvI GCAGC 1 cut(s) 2372
BccI CCATC 7 cut(s) 113, 290, 583, 1105, 1186, 1592, 2431
BceAI ACGGC 4 cut(s) 133, 1074, 1598, 2198
BcgI CGANNNNNNTGC 2 cut(s) 2263, 2297
BciT130I CCWGG 2 cut(s) 927, 960
BciVI GTATCC 2 cut(s) 388, 1581
BclI TGATCA 1 cut(s) 808
BcnI CCSGG 6 cut(s) 171, 511, 554, 555, 562, 1151
BcoDI GTCTC 3 cut(s) 136, 243, 2412
BfmI CTRYAG 1 cut(s) 2235
BfuAI ACCTGC 2 cut(s) 592, 926
BfuI GTATCC 2 cut(s) 388, 1581
BglII AGATCT 1 cut(s) 1909
BisI GCNGC 2 cut(s) 643, 2361
BlsI GCNGC 2 cut(s) 644, 2362
Bme1390I CCNGG 8 cut(s) 171, 511, 554, 555, 562, 927, 960, 1151
Bme18I GGWCC 6 cut(s) 322, 342, 507, 869, 956, 1144
BmeRI GACNNNNNGTC 1 cut(s) 2406
BmeT110I CYCGRG 1 cut(s) 553
BmgT120I GGNCC 7 cut(s) 322, 342, 507, 644, 869, 956, 1144
BmiI GGNNCC 6 cut(s) 185, 324, 559, 597, 957, 1573
BmrFI CCNGG 8 cut(s) 171, 511, 554, 555, 562, 927, 960, 1151
BmrI ACTGGG 3 cut(s) 251, 663, 849
BmsI GCATC 4 cut(s) 72, 727, 1234, 2347
BmuI ACTGGG 3 cut(s) 251, 663, 849
BpiI GAAGAC 2 cut(s) 717, 2405
BpmI CTGGAG 1 cut(s) 216
Bpu10I CCTNAGC 1 cut(s) 741
Bpu14I TTCGAA 2 cut(s) 933, 1437
BpuEI CTTGAG 1 cut(s) 437
BpuMI CCSGG 6 cut(s) 171, 511, 554, 555, 562, 1151
Bsa29I ATCGAT 1 cut(s) 284
BsaAI YACGTR 1 cut(s) 1064
BsaBI GATNNNNATC 1 cut(s) 1748
BsaHI GRCGYC 1 cut(s) 84
BsaI GGTCTC 1 cut(s) 2412
BsaJI CCNNGG 7 cut(s) 169, 553, 647, 926, 1150, 1642, 2214
BsaWI WCCGGW 1 cut(s) 1045
BsaXI ACNNNNNCTCC 4 cut(s) 291, 321, 1520, 1550
Bse118I RCCGGY 1 cut(s) 501
Bse1I ACTGG 6 cut(s) 9, 257, 658, 844, 1453, 2131
Bse3DI GCAATG 2 cut(s) 1930, 2064
Bse8I GATNNNNATC 1 cut(s) 1748
BseBI CCWGG 2 cut(s) 927, 960
BseCI ATCGAT 1 cut(s) 284
BseDI CCNNGG 7 cut(s) 169, 553, 647, 926, 1150, 1642, 2214
BseGI GGATG 1 cut(s) 2423
BseJI GATNNNNATC 1 cut(s) 1748
BseMI GCAATG 2 cut(s) 1930, 2064
BseMII CTCAG 2 cut(s) 477, 732
BseNI ACTGG 6 cut(s) 9, 257, 658, 844, 1453, 2131
BseSI GKGCMC 1 cut(s) 186
BseXI GCAGC 1 cut(s) 2372
BseYI CCCAGC 1 cut(s) 1421
BsgI GTGCAG 1 cut(s) 1114
Bsh1236I CGCG 1 cut(s) 2309
BshFI GGCC 5 cut(s) 303, 645, 1641, 1919, 2320
BshNI GGYRCC 1 cut(s) 183
BshVI ATCGAT 1 cut(s) 284
BsiHKAI GWGCWC 2 cut(s) 1079, 1813
BsiHKCI CYCGRG 1 cut(s) 553
BsiSI CCGG 8 cut(s) 171, 502, 510, 554, 561, 1046, 1150, 2048
BslFI GGGAC 3 cut(s) 87, 671, 1199
BsmAI GTCTC 3 cut(s) 136, 243, 2412
BsmFI GGGAC 3 cut(s) 87, 671, 1199
BsmI GAATGC 2 cut(s) 2143, 2274
BsnI GGCC 5 cut(s) 303, 645, 1641, 1919, 2320
Bso31I GGTCTC 1 cut(s) 2412
BsoBI CYCGRG 1 cut(s) 553
Bsp119I TTCGAA 2 cut(s) 933, 1437
Bsp1286I GDGCHC 3 cut(s) 186, 1079, 1813
Bsp1407I TGTACA 1 cut(s) 2465
Bsp143I GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
Bsp68I TCGCGA 1 cut(s) 2309
BspANI GGCC 5 cut(s) 303, 645, 1641, 1919, 2320
BspCNI CTCAG 2 cut(s) 476, 733
BspDI ATCGAT 1 cut(s) 284
BspFNI CGCG 1 cut(s) 2309
BspHI TCATGA 1 cut(s) 1876
BspLI GGNNCC 6 cut(s) 185, 324, 559, 597, 957, 1573
BspMI ACCTGC 2 cut(s) 592, 926
BspPI GGATC 3 cut(s) 824, 881, 1327
BspQI GCTCTTC 1 cut(s) 2370
BspT104I TTCGAA 2 cut(s) 933, 1437
BspT107I GGYRCC 1 cut(s) 183
BspTNI GGTCTC 1 cut(s) 2412
BsrBI CCGCTC 1 cut(s) 669
BsrDI GCAATG 2 cut(s) 1930, 2064
BsrFI RCCGGY 1 cut(s) 501
BsrGI TGTACA 1 cut(s) 2465
BsrI ACTGG 6 cut(s) 9, 257, 658, 844, 1453, 2131
BssAI RCCGGY 1 cut(s) 501
BssECI CCNNGG 7 cut(s) 169, 553, 647, 926, 1150, 1642, 2214
BssMI GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 3 cut(s) 1078, 1135, 1198
BssT1I CCWWGG 2 cut(s) 647, 1642
Bst2BI CACGAG 3 cut(s) 1078, 1135, 1198
Bst2UI CCWGG 2 cut(s) 927, 960
Bst4CI ACNGT 7 cut(s) 101, 293, 676, 864, 884, 1513, 2070
Bst6I CTCTTC 6 cut(s) 47, 367, 1083, 1647, 1731, 2370
BstACI GRCGYC 1 cut(s) 84
BstAUI TGTACA 1 cut(s) 2465
BstBAI YACGTR 1 cut(s) 1064
BstBI TTCGAA 2 cut(s) 933, 1437
BstC8I GCNNGC 6 cut(s) 71, 798, 913, 1305, 1921, 2482
BstDEI CTNAG 4 cut(s) 463, 741, 1286, 1892
BstDSI CCRYGG 1 cut(s) 2214
BstF5I GGATG 1 cut(s) 2423
BstFNI CGCG 1 cut(s) 2309
BstHHI GCGC 1 cut(s) 615
BstKTI GATC 8 cut(s) 288, 756, 811, 819, 889, 1322, 1912, 2317
BstMAI GTCTC 3 cut(s) 136, 243, 2412
BstMBI GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
BstMWI GCNNNNNNNGC 3 cut(s) 502, 1265, 1304
BstNI CCWGG 2 cut(s) 927, 960
BstNSI RCATGY 4 cut(s) 576, 1002, 2186, 2466
BstSCI CCNGG 8 cut(s) 169, 509, 552, 553, 560, 925, 958, 1149
BstSFI CTRYAG 1 cut(s) 2235
BstSLI GKGCMC 1 cut(s) 186
BstUI CGCG 1 cut(s) 2309
BstV1I GCAGC 1 cut(s) 2372
BstV2I GAAGAC 2 cut(s) 717, 2405
BstX2I RGATCY 2 cut(s) 1319, 1909
BstYI RGATCY 2 cut(s) 1319, 1909
Bsu15I ATCGAT 1 cut(s) 284
BsuI GTATCC 2 cut(s) 388, 1581
BsuRI GGCC 5 cut(s) 303, 645, 1641, 1919, 2320
BsuTUI ATCGAT 1 cut(s) 284
BtgI CCRYGG 1 cut(s) 2214
BtsCI GGATG 1 cut(s) 2423
BtsI GCAGTG 2 cut(s) 470, 1518
BtsIMutI CAGTG 3 cut(s) 470, 869, 1518
BtuMI TCGCGA 1 cut(s) 2309
BveI ACCTGC 2 cut(s) 592, 926
Cac8I GCNNGC 6 cut(s) 71, 798, 913, 1305, 1921, 2482
CciI TCATGA 1 cut(s) 1876
CfoI GCGC 1 cut(s) 615
Cfr10I RCCGGY 1 cut(s) 501
Cfr13I GGNCC 7 cut(s) 322, 342, 507, 644, 869, 956, 1144
Cfr9I CCCGGG 1 cut(s) 553
ClaI ATCGAT 1 cut(s) 284
CpoI CGGWCCG 1 cut(s) 507
CseI GACGC 2 cut(s) 92, 1839
Csp6I GTAC 3 cut(s) 152, 672, 2466
CspCI CAANNNNNGTGG 2 cut(s) 2001, 2036
CspI CGGWCCG 1 cut(s) 507
CviQI GTAC 3 cut(s) 152, 672, 2466
DdeI CTNAG 4 cut(s) 463, 741, 1286, 1892
DpnI GATC 8 cut(s) 287, 755, 810, 818, 888, 1321, 1911, 2316
DpnII GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
DrdI GACNNNNNNGTC 3 cut(s) 128, 257, 867
DriI GACNNNNNGTC 1 cut(s) 2406
DseDI GACNNNNNNGTC 3 cut(s) 128, 257, 867
EaeI YGGCCR 2 cut(s) 1639, 2318
Eam1104I CTCTTC 6 cut(s) 47, 367, 1083, 1647, 1731, 2370
Eam1105I GACNNNNNGTC 1 cut(s) 2406
EarI CTCTTC 6 cut(s) 47, 367, 1083, 1647, 1731, 2370
EciI GGCGGA 1 cut(s) 334
Eco130I CCWWGG 2 cut(s) 647, 1642
Eco147I AGGCCT 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 2412
Eco32I GATATC 1 cut(s) 720
Eco47I GGWCC 6 cut(s) 322, 342, 507, 869, 956, 1144
Eco57I CTGAAG 3 cut(s) 148, 2022, 2417
Eco72I CACGTG 1 cut(s) 1064
Eco88I CYCGRG 1 cut(s) 553
EcoO109I RGGNCCY 2 cut(s) 322, 956
EcoRI GAATTC 1 cut(s) 2303
EcoRII CCWGG 2 cut(s) 925, 958
EcoRV GATATC 1 cut(s) 720
EcoT14I CCWWGG 2 cut(s) 647, 1642
ErhI CCWWGG 2 cut(s) 647, 1642
FaqI GGGAC 3 cut(s) 87, 671, 1199
FauI CCCGC 2 cut(s) 630, 2392
FauNDI CATATG 1 cut(s) 2032
FbaI TGATCA 1 cut(s) 808
FblI GTMKAC 2 cut(s) 114, 1055
Fnu4HI GCNGC 2 cut(s) 643, 2361
FokI GGATG 1 cut(s) 2410
Fsp4HI GCNGC 2 cut(s) 643, 2361
FspI TGCGCA 1 cut(s) 614
GlaI GCGC 1 cut(s) 614
GluI GCNGC 2 cut(s) 643, 2361
GsaI CCCAGC 1 cut(s) 1425
GsuI CTGGAG 1 cut(s) 216
HaeIII GGCC 5 cut(s) 303, 645, 1641, 1919, 2320
HapII CCGG 8 cut(s) 171, 502, 510, 554, 561, 1046, 1150, 2048
HgaI GACGC 2 cut(s) 92, 1839
HhaI GCGC 1 cut(s) 615
Hin1I GRCGYC 1 cut(s) 84
Hin6I GCGC 1 cut(s) 613
HinP1I GCGC 1 cut(s) 613
HincII GTYRAC 4 cut(s) 115, 703, 1004, 1428
HindII GTYRAC 4 cut(s) 115, 703, 1004, 1428
HindIII AAGCTT 2 cut(s) 386, 1550
HpaII CCGG 8 cut(s) 171, 502, 510, 554, 561, 1046, 1150, 2048
HphI GGTGA 6 cut(s) 305, 357, 936, 974, 2252, 2364
Hpy166II GTNNAC 6 cut(s) 115, 703, 1004, 1056, 1069, 1428
Hpy188I TCNGA 4 cut(s) 110, 466, 1486, 2086
Hpy8I GTNNAC 6 cut(s) 115, 703, 1004, 1056, 1069, 1428
Hpy99I CGWCG 2 cut(s) 119, 125
HpyAV CCTTC 9 cut(s) 56, 440, 733, 1007, 1018, 1288, 1553, 2198, 2379
HpyCH4III ACNGT 7 cut(s) 101, 293, 676, 864, 884, 1513, 2070
HpyCH4IV ACGT 3 cut(s) 123, 351, 1063
HpyF10VI GCNNNNNNNGC 3 cut(s) 502, 1265, 1304
HpyF3I CTNAG 4 cut(s) 463, 741, 1286, 1892
HpySE526I ACGT 3 cut(s) 123, 351, 1063
Hsp92I GRCGYC 1 cut(s) 84
HspAI GCGC 1 cut(s) 613
Ksp22I TGATCA 1 cut(s) 808
Kzo9I GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
LguI GCTCTTC 1 cut(s) 2370
LmnI GCTCC 2 cut(s) 1577, 1993
Lsp1109I GCAGC 1 cut(s) 2372
LweI GCATC 4 cut(s) 72, 727, 1234, 2347
MaeII ACGT 3 cut(s) 123, 351, 1063
MaeIII GTNAC 4 cut(s) 352, 1324, 1488, 2458
MalI GATC 8 cut(s) 287, 755, 810, 818, 888, 1321, 1911, 2316
MbiI CCGCTC 1 cut(s) 669
MboI GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
MfeI CAATTG 1 cut(s) 2469
MflI RGATCY 2 cut(s) 1319, 1909
MhlI GDGCHC 3 cut(s) 186, 1079, 1813
MlsI TGGCCA 1 cut(s) 1641
MluNI TGGCCA 1 cut(s) 1641
MlyI GAGTC 6 cut(s) 120, 740, 1043, 1248, 1775, 2416
MmeI TCCRAC 5 cut(s) 495, 658, 1714, 1802, 2005
Mox20I TGGCCA 1 cut(s) 1641
MroXI GAANNNNTTC 1 cut(s) 1671
MscI TGGCCA 1 cut(s) 1641
MseI TTAA 5 cut(s) 1659, 1707, 1794, 1817, 2348
MslI CAYNNNNRTG 1 cut(s) 2290
Msp20I TGGCCA 1 cut(s) 1641
MspI CCGG 8 cut(s) 171, 502, 510, 554, 561, 1046, 1150, 2048
MspR9I CCNGG 8 cut(s) 171, 511, 554, 555, 562, 927, 960, 1151
MunI CAATTG 1 cut(s) 2469
Mva1269I GAATGC 2 cut(s) 2143, 2274
MvaI CCWGG 2 cut(s) 927, 960
MvnI CGCG 1 cut(s) 2309
MwoI GCNNNNNNNGC 3 cut(s) 502, 1265, 1304
NciI CCSGG 6 cut(s) 171, 511, 554, 555, 562, 1151
NdeI CATATG 1 cut(s) 2032
NdeII GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
NlaIV GGNNCC 6 cut(s) 185, 324, 559, 597, 957, 1573
NmuCI GTSAC 1 cut(s) 2458
NruI TCGCGA 1 cut(s) 2309
NsbI TGCGCA 1 cut(s) 614
NspI RCATGY 4 cut(s) 576, 1002, 2186, 2466
NspV TTCGAA 2 cut(s) 933, 1437
OliI CACNNNNGTG 1 cut(s) 2290
PagI TCATGA 1 cut(s) 1876
PaqCI CACCTGC 2 cut(s) 592, 926
PceI AGGCCT 1 cut(s) 303
PciI ACATGT 4 cut(s) 572, 998, 2182, 2462
PciSI GCTCTTC 1 cut(s) 2370
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PctI GAATGC 2 cut(s) 2143, 2274
PdmI GAANNNNTTC 1 cut(s) 1671
PfeI GAWTC 9 cut(s) 214, 266, 776, 851, 935, 1744, 1883, 2228, 2243
PflMI CCANNNNNTGG 2 cut(s) 34, 234
PkrI GCNGC 2 cut(s) 644, 2362
PleI GAGTC 6 cut(s) 119, 740, 1043, 1247, 1775, 2415
PmaCI CACGTG 1 cut(s) 1064
PmlI CACGTG 1 cut(s) 1064
PpsI GAGTC 6 cut(s) 119, 740, 1043, 1247, 1775, 2415
Ppu21I YACGTR 1 cut(s) 1064
PpuMI RGGWCCY 2 cut(s) 322, 956
PscI ACATGT 4 cut(s) 572, 998, 2182, 2462
PsiI TTATAA 2 cut(s) 1581, 2267
Psp1406I AACGTT 1 cut(s) 351
Psp5II RGGWCCY 2 cut(s) 322, 956
Psp6I CCWGG 2 cut(s) 925, 958
PspCI CACGTG 1 cut(s) 1064
PspFI CCCAGC 1 cut(s) 1421
PspGI CCWGG 2 cut(s) 925, 958
PspN4I GGNNCC 6 cut(s) 185, 324, 559, 597, 957, 1573
PspPI GGNCC 7 cut(s) 322, 342, 507, 644, 869, 956, 1144
PspPPI RGGWCCY 2 cut(s) 322, 956
PsrI GAACNNNNNNTAC 2 cut(s) 2147, 2179
PsuI RGATCY 2 cut(s) 1319, 1909
RruI TCGCGA 1 cut(s) 2309
RsaI GTAC 3 cut(s) 153, 673, 2467
RsaNI GTAC 3 cut(s) 152, 672, 2466
RseI CAYNNNNRTG 1 cut(s) 2290
Rsr2I CGGWCCG 1 cut(s) 507
RsrII CGGWCCG 1 cut(s) 507
SalI GTCGAC 1 cut(s) 113
SapI GCTCTTC 1 cut(s) 2370
SaqAI TTAA 5 cut(s) 1659, 1707, 1794, 1817, 2348
SatI GCNGC 2 cut(s) 643, 2361
Sau3AI GATC 8 cut(s) 285, 753, 808, 816, 886, 1319, 1909, 2314
Sau96I GGNCC 7 cut(s) 322, 342, 507, 644, 869, 956, 1144
SchI GAGTC 6 cut(s) 120, 740, 1043, 1248, 1775, 2416
ScrFI CCNGG 8 cut(s) 171, 511, 554, 555, 562, 927, 960, 1151
SduI GDGCHC 3 cut(s) 186, 1079, 1813
SfaNI GCATC 4 cut(s) 72, 727, 1234, 2347
SfcI CTRYAG 1 cut(s) 2235
SfuI TTCGAA 2 cut(s) 933, 1437
SinI GGWCC 6 cut(s) 322, 342, 507, 869, 956, 1144
SmaI CCCGGG 1 cut(s) 555
SmiMI CAYNNNNRTG 1 cut(s) 2290
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
SseBI AGGCCT 1 cut(s) 303
SspI AATATT 2 cut(s) 1403, 1983
StuI AGGCCT 1 cut(s) 303
StyD4I CCNGG 8 cut(s) 169, 509, 552, 553, 560, 925, 958, 1149
StyI CCWWGG 2 cut(s) 647, 1642
TaaI ACNGT 7 cut(s) 101, 293, 676, 864, 884, 1513, 2070
TaiI ACGT 3 cut(s) 126, 354, 1066
TaqI TCGA 8 cut(s) 15, 114, 284, 933, 1237, 1242, 1437, 1836
TatI WGTACW 2 cut(s) 151, 2465
TauI GCSGC 1 cut(s) 645
TfiI GAWTC 9 cut(s) 214, 266, 776, 851, 935, 1744, 1883, 2228, 2243
Tru1I TTAA 5 cut(s) 1659, 1707, 1794, 1817, 2348
Tru9I TTAA 5 cut(s) 1659, 1707, 1794, 1817, 2348
TscAI CASTG 3 cut(s) 477, 869, 1525
TseFI GTSAC 1 cut(s) 2458
TseI GCWGC 1 cut(s) 2360
Tsp45I GTSAC 1 cut(s) 2458
TspGWI ACGGA 1 cut(s) 1564
TspMI CCCGGG 1 cut(s) 553
TspRI CASTG 3 cut(s) 477, 869, 1525
Van91I CCANNNNNTGG 2 cut(s) 34, 234
VpaK11BI GGWCC 6 cut(s) 322, 342, 507, 869, 956, 1144
XapI RAATTY 3 cut(s) 175, 2170, 2303
XceI RCATGY 4 cut(s) 576, 1002, 2186, 2466
XcmI CCANNNNNNNNNTGG 1 cut(s) 1154
XmaI CCCGGG 1 cut(s) 553
XmiI GTMKAC 2 cut(s) 114, 1055
XmnI GAANNNNTTC 1 cut(s) 1671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.