Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010546

Physical Location & Seq

Genomic Coordinates Forward (+)

31684426 .. 31686711

Gene Structure 2286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0278800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGCCAACTATTGGCGATATTTTAGGCTGGATGGTGATCCACACGTATATGGAGTCAGTGACATTTATTATCGCTGCAACGTAGGTACCAACTTATTCACTGTGTGCATACATCATGGAGGCCGATTTTATTCAAGGAATGGAGTTAATAAAGTTTATAGAGGAGGGGAAATTGTGTACGTTGATGGGGTAGATAAGGACAAATTATCGGTGACCGGCTTCAATTACTGGGCACATGACCTGGGGTACTTAAGAGGACCTGTTGGTTACTGGTTTAGGATACCAGGAAGCGAAAGTGGGACTAGTTATTTACCAATAGTGACTGATGCAGACTGTTTGGACATGGTGCAGTTCATACCTAAGGTGGAGAGGTTAATTCATGTGTACATTGTGTGCTTAGCTGGAAGAAGATATTTGCAAGATTATGAGTTGGATCGATACAATGATGAAGTGGATCATTTATCCTCCATCGGTCATACCATTGATGACCTGTGGTTGGAAGATGATGTAGCAGAAAATGTGGAAGATGAGGCCCAAGATTTTGGTACAGATGGGGAACAGGTGCAAGAGGGTTTTGAAAATGTGGAAGAAGAGGTTCATGTGGATTCTGAAGATGAGTATATGCCAGAAGAGGTGATAAGTGTGCCACAGACTGGGCCAGTTAGAAATGATCCTAATGGACTTCCCCCACAGGAAAGACAAAGAAGAGGCTCACATGGTGGTCATGCTTCGACTTCAAGGAAGATGAAAGATAAAGGGAAGGAGAAAGTTGTTGAGAAAGAGATGGAAGGTCCAAAGAAGAGGCGTGGTAGACCTAAGAGGAACTTGAAGAGAAGGTATTCTACTAGGAGCTGTGGTGAGGGGTGTTCACAACCAGTGAATTATTATGACAGTGATAGCAGTGATGATTCCGACGATCCTAATTTTGATGGCATAGTAGATAGTGATTTTGAGTTAAATGATGCAGATGATGAGGTTGAATTTCAGACTCATGTTGATGGGGATCCTAGCAACGTCGAGGAATGGGAAGGTATGGGATTCAACGGAACAATCTCTGAGGATGATGGGACTGCCTCTGATGGCTTTCCTAGTATGCATGGTTCCTCCGATGAAAGTGGGGAGGATGTTGGAATGTTTCCAGTCAAGGGTAAGAAGAGGTTTTCAGAATGGAAGGAGTTCAATCAGTACACTGACATGCAGAATCCTAGATTTGAGTTAGGTATGATATTTCCCAACTCATTAGTGTTCAAGAAAGCCATGAGGAAGCATGTTGTTCTTACAAAGAAGGAATTGAGGTTTCAGAAGAATACAAGGCAGAAGGTAAAGGTGGTGTGCATTACAAGTCTAGGATGTCCATTCACAGTATATGCATCTACTCCAGATAAAGATAACCCAACCATTCAGATCAAAACCTTCAAACCAGAACACAAGTGCTCGAGTGTGGAGGGAAGGGTGTACCACTGTCATGCTCTGTTTATTGCTGATGAGTATGCAAATTTTTTCATGCATGATCCCAATTGGACAAGGGAAGGGGTCCAGAATGCAGTGGGAAAAGACTTTGGCATGGATATAGGATATCAGATGGCCTATAGAGCTAAGAGGAGAGCTGTCAAGTTAGCTCAAGGTAGTCACGAGGATCAATATAATCTCCTTGAGAGCTATGCAAATGAATTAAAGAAGATGAACCCGGGTACCTCTGTATGGATTCAAACAGAGCTAAATGGAGATGTAACAAGGTTTAAGAGGATTTATATATGCTTGGAGCCTTTGAAGATTGGTTGGGGGCAGGGTGTAGGCCAATCATTGGGCTGGATGGCTGCCACCTTAAGGGTGTTCACAAAGCCCAAATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

617

Amino Acids

70.47

Weight (kDa)

5.28

Isoelectric Point (pI)

34.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PB1-like	PF26130	31 - 130	6.5e-16	PB1-like domain
DBD_Tnp_Mut	PF03108	405 - 462	1.9e-06	MuDR family transposase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g29040
malus_domestica	MD03G1178200.v1.1 MD11G1198000.v1.1
prunus_persica	Prupe.4G244600_v2.0.a1 Prupe.4G244600_v2.0.a1 Prupe.4G244600_v2.0.a1 Prupe.4G244600_v2.0.a1
pyrus_communis	pycom03g13490 pycom11g17140
rosa_chinensis	RchiOBHm_Chr5g0051621
rosa_laevigata	RLG00000034872
rosa_multiflora	Rmu_ssc0000089.1_g000034
rosa_roxburghii	Rroxscaffold_1G00027100
rosa_rugosa	Rorug05G0278700 Rorug05G0278800 Rorug05G0278900
rosa_samantha	Rh5AG350000 Rh5BG361800 Rh5CG386700 Rh5DG376700
rosa_wichuraiana	Rw5G033120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	86, 1691
AccB1I	GGYRCC	2 cut(s)	86, 1691
AccB7I	CCANNNNNTGG	3 cut(s)	12, 653, 1804
AccI	GTMKAC	1 cut(s)	811
AclWI	GGATC	9 cut(s)	32, 441, 462, 665, 911, 998, 1011, 1505, 1644
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	980, 1495
AcuI	CTGAAG	1 cut(s)	630
AdeI	CACNNNGTG	2 cut(s)	105, 719
AfaI	GTAC	8 cut(s)	88, 179, 248, 386, 547, 1187, 1457, 1693
AfiI	CCNNNNNNNGG	7 cut(s)	12, 496, 653, 1145, 1701, 1804, 1827
AflII	CTTAAG	2 cut(s)	250, 1825
AflIII	ACRYGT	1 cut(s)	43
AhlI	ACTAGT	1 cut(s)	302
AjnI	CCWGG	2 cut(s)	240, 283
AluBI	AGCT	7 cut(s)	401, 852, 1595, 1607, 1619, 1659, 1717
AluI	AGCT	7 cut(s)	401, 852, 1595, 1607, 1619, 1659, 1717
Alw21I	GWGCWC	1 cut(s)	1436
AlwI	GGATC	9 cut(s)	32, 441, 462, 665, 911, 998, 1011, 1505, 1644
Ama87I	CYCGRG	2 cut(s)	1435, 1687
AoxI	GGCC	6 cut(s)	3, 121, 531, 656, 1584, 1795
ApeKI	GCWGC	2 cut(s)	75, 1817
ApoI	RAATTY	2 cut(s)	980, 1495
Asp700I	GAANNNNTTC	3 cut(s)	594, 838, 1175
Asp718I	GGTACC	2 cut(s)	86, 1691
AspS9I	GGNCC	5 cut(s)	257, 532, 656, 791, 1534
AsuC2I	CCSGG	2 cut(s)	1688, 1689
AsuHPI	GGTGA	4 cut(s)	47, 223, 646, 869
AvaI	CYCGRG	2 cut(s)	1435, 1687
AvaII	GGWCC	3 cut(s)	257, 791, 1534
AxyI	CCTNAGG	1 cut(s)	360
BaeGI	GKGCMC	1 cut(s)	235
BaeI	ACNNNNGTAYC	6 cut(s)	70, 103, 1675, 1683, 1708, 1716
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	1003
BanI	GGYRCC	2 cut(s)	86, 1691
BarI	GAAGNNNNNNTAC	2 cut(s)	826, 858
BauI	CACGAG	1 cut(s)	1631
Bbv12I	GWGCWC	1 cut(s)	1436
BbvI	GCAGC	2 cut(s)	62, 1804
BciT130I	CCWGG	2 cut(s)	242, 285
BciVI	GTATCC	1 cut(s)	273
BcnI	CCSGG	2 cut(s)	1688, 1689
BcuI	ACTAGT	1 cut(s)	302
BfaI	CTAG	6 cut(s)	303, 846, 1008, 1089, 1206, 1346
BfmI	CTRYAG	1 cut(s)	1588
BfrI	CTTAAG	2 cut(s)	250, 1825
BfuI	GTATCC	1 cut(s)	273
BisI	GCNGC	2 cut(s)	76, 1818
BlpI	GCTNAGC	1 cut(s)	397
BlsI	GCNGC	2 cut(s)	77, 1819
Bme1390I	CCNGG	4 cut(s)	242, 285, 1688, 1689
Bme18I	GGWCC	3 cut(s)	257, 791, 1534
BmeT110I	CYCGRG	2 cut(s)	1435, 1687
BmgT120I	GGNCC	5 cut(s)	257, 532, 656, 791, 1534
BmiI	GGNNCC	6 cut(s)	88, 1005, 1102, 1535, 1693, 1764
BmrFI	CCNGG	4 cut(s)	242, 285, 1688, 1689
BmrI	ACTGGG	2 cut(s)	238, 663
BmsI	GCATC	3 cut(s)	316, 952, 1379
BmuI	ACTGGG	2 cut(s)	238, 663
BpmI	CTGGAG	1 cut(s)	1362
Bpu1102I	GCTNAGC	1 cut(s)	397
BpuEI	CTTGAG	2 cut(s)	1605, 1673
BpuMI	CCSGG	2 cut(s)	1688, 1689
Bsa29I	ATCGAT	1 cut(s)	436
BsaAI	YACGTR	1 cut(s)	46
BsaBI	GATNNNNATC	2 cut(s)	36, 1002
BsaJI	CCNNGG	2 cut(s)	241, 1687
BsaXI	ACNNNNNCTCC	2 cut(s)	841, 871
Bsc4I	CCNNNNNNNGG	7 cut(s)	12, 496, 653, 1145, 1701, 1804, 1827
Bse118I	RCCGGY	1 cut(s)	215
Bse1I	ACTGG	6 cut(s)	233, 275, 658, 659, 875, 1139
Bse21I	CCTNAGG	1 cut(s)	360
Bse8I	GATNNNNATC	2 cut(s)	36, 1002
BseBI	CCWGG	2 cut(s)	242, 285
BseCI	ATCGAT	1 cut(s)	436
BseDI	CCNNGG	2 cut(s)	241, 1687
BseGI	GGATG	5 cut(s)	37, 1066, 1129, 1355, 1818
BseJI	GATNNNNATC	2 cut(s)	36, 1002
BseLI	CCNNNNNNNGG	7 cut(s)	12, 496, 653, 1145, 1701, 1804, 1827
BseMII	CTCAG	1 cut(s)	1047
BseNI	ACTGG	6 cut(s)	233, 275, 658, 659, 875, 1139
BseRI	GAGGAG	2 cut(s)	177, 1615
BseSI	GKGCMC	1 cut(s)	235
BseXI	GCAGC	2 cut(s)	62, 1804
BsgI	GTGCAG	1 cut(s)	368
BshFI	GGCC	6 cut(s)	5, 123, 533, 658, 1586, 1797
BshNI	GGYRCC	2 cut(s)	86, 1691
BshVI	ATCGAT	1 cut(s)	436
BsiHKAI	GWGCWC	1 cut(s)	1436
BsiHKCI	CYCGRG	2 cut(s)	1435, 1687
BsiSI	CCGG	2 cut(s)	216, 1688
BslFI	GGGAC	2 cut(s)	313, 1081
BslI	CCNNNNNNNGG	7 cut(s)	12, 496, 653, 1145, 1701, 1804, 1827
BsmFI	GGGAC	2 cut(s)	313, 1081
BsmI	GAATGC	1 cut(s)	1546
BsnI	GGCC	6 cut(s)	5, 123, 533, 658, 1586, 1797
BsoBI	CYCGRG	2 cut(s)	1435, 1687
Bsp1286I	GDGCHC	2 cut(s)	235, 1436
Bsp1407I	TGTACA	1 cut(s)	384
Bsp143I	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
Bsp1720I	GCTNAGC	1 cut(s)	397
BspANI	GGCC	6 cut(s)	5, 123, 533, 658, 1586, 1797
BspCNI	CTCAG	1 cut(s)	1048
BspDI	ATCGAT	1 cut(s)	436
BspLI	GGNNCC	6 cut(s)	88, 1005, 1102, 1535, 1693, 1764
BspPI	GGATC	9 cut(s)	32, 441, 462, 665, 911, 998, 1011, 1505, 1644
BspT107I	GGYRCC	2 cut(s)	86, 1691
BspTI	CTTAAG	2 cut(s)	250, 1825
BsrFI	RCCGGY	1 cut(s)	215
BsrGI	TGTACA	1 cut(s)	384
BsrI	ACTGG	6 cut(s)	233, 275, 658, 659, 875, 1139
BssAI	RCCGGY	1 cut(s)	215
BssECI	CCNNGG	2 cut(s)	241, 1687
BssMI	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
BssSI	CACGAG	1 cut(s)	1631
Bst2BI	CACGAG	1 cut(s)	1631
Bst2UI	CCWGG	2 cut(s)	242, 285
Bst4CI	ACNGT	5 cut(s)	103, 335, 893, 1363, 1463
Bst6I	CTCTTC	6 cut(s)	585, 624, 700, 794, 824, 1148
BstAFI	CTTAAG	2 cut(s)	250, 1825
BstAUI	TGTACA	1 cut(s)	384
BstBAI	YACGTR	1 cut(s)	46
BstDEI	CTNAG	5 cut(s)	360, 397, 816, 1056, 1596
BstEII	GGTNACC	1 cut(s)	211
BstF5I	GGATG	5 cut(s)	37, 1066, 1129, 1355, 1818
BstKTI	GATC	9 cut(s)	40, 436, 457, 673, 919, 1006, 1407, 1513, 1639
BstMBI	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
BstMWI	GCNNNNNNNGC	1 cut(s)	1592
BstNI	CCWGG	2 cut(s)	242, 285
BstNSI	RCATGY	2 cut(s)	1198, 1271
BstPI	GGTNACC	1 cut(s)	211
BstSCI	CCNGG	4 cut(s)	240, 283, 1686, 1687
BstSFI	CTRYAG	1 cut(s)	1588
BstSLI	GKGCMC	1 cut(s)	235
BstV1I	GCAGC	2 cut(s)	62, 1804
BstX2I	RGATCY	1 cut(s)	1003
BstXI	CCANNNNNNTGG	1 cut(s)	542
BstYI	RGATCY	1 cut(s)	1003
Bsu15I	ATCGAT	1 cut(s)	436
Bsu36I	CCTNAGG	1 cut(s)	360
BsuI	GTATCC	1 cut(s)	273
BsuRI	GGCC	6 cut(s)	5, 123, 533, 658, 1586, 1797
BsuTUI	ATCGAT	1 cut(s)	436
BtsCI	GGATG	5 cut(s)	37, 1066, 1129, 1355, 1818
BtsI	GCAGTG	2 cut(s)	907, 1551
BtsIMutI	CAGTG	8 cut(s)	64, 99, 882, 898, 907, 1188, 1459, 1551
Cfr10I	RCCGGY	1 cut(s)	215
Cfr13I	GGNCC	5 cut(s)	257, 532, 656, 791, 1534
Cfr9I	CCCGGG	1 cut(s)	1687
ClaI	ATCGAT	1 cut(s)	436
Csp6I	GTAC	8 cut(s)	87, 178, 247, 385, 546, 1186, 1456, 1692
CviQI	GTAC	8 cut(s)	87, 178, 247, 385, 546, 1186, 1456, 1692
DdeI	CTNAG	5 cut(s)	360, 397, 816, 1056, 1596
DpnI	GATC	9 cut(s)	39, 435, 456, 672, 918, 1005, 1406, 1512, 1638
DpnII	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
DraIII	CACNNNGTG	2 cut(s)	105, 719
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	6 cut(s)	585, 624, 700, 794, 824, 1148
EarI	CTCTTC	6 cut(s)	585, 624, 700, 794, 824, 1148
Eco32I	GATATC	1 cut(s)	1577
Eco47I	GGWCC	3 cut(s)	257, 791, 1534
Eco57I	CTGAAG	1 cut(s)	630
Eco81I	CCTNAGG	1 cut(s)	360
Eco88I	CYCGRG	2 cut(s)	1435, 1687
Eco91I	GGTNACC	1 cut(s)	211
EcoO109I	RGGNCCY	1 cut(s)	257
EcoO65I	GGTNACC	1 cut(s)	211
EcoRII	CCWGG	2 cut(s)	240, 283
EcoRV	GATATC	1 cut(s)	1577
EcoT22I	ATGCAT	3 cut(s)	1098, 1372, 1509
FalI	AAGNNNNNCTT	2 cut(s)	809, 841
FaqI	GGGAC	2 cut(s)	313, 1081
FblI	GTMKAC	1 cut(s)	811
Fnu4HI	GCNGC	2 cut(s)	76, 1818
FokI	GGATG	5 cut(s)	44, 1073, 1136, 1362, 1825
Fsp4HI	GCNGC	2 cut(s)	76, 1818
FspBI	CTAG	6 cut(s)	303, 846, 1008, 1089, 1206, 1346
GluI	GCNGC	2 cut(s)	76, 1818
GsuI	CTGGAG	1 cut(s)	1362
HaeIII	GGCC	6 cut(s)	5, 123, 533, 658, 1586, 1797
HapII	CCGG	2 cut(s)	216, 1688
HinfI	GANTC	7 cut(s)	54, 605, 908, 988, 1038, 1201, 1705
HpaII	CCGG	2 cut(s)	216, 1688
HphI	GGTGA	4 cut(s)	47, 223, 646, 869
Hpy166II	GTNNAC	7 cut(s)	178, 385, 812, 869, 1188, 1456, 1836
Hpy188III	TCNNGA	4 cut(s)	1249, 1379, 1537, 1631
Hpy8I	GTNNAC	7 cut(s)	178, 385, 812, 869, 1188, 1456, 1836
Hpy99I	CGWCG	2 cut(s)	917, 1019
HpyCH4III	ACNGT	5 cut(s)	103, 335, 893, 1363, 1463
HpyCH4IV	ACGT	4 cut(s)	45, 81, 180, 1014
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1592
HpyF3I	CTNAG	5 cut(s)	360, 397, 816, 1056, 1596
HpySE526I	ACGT	4 cut(s)	45, 81, 180, 1014
KpnI	GGTACC	2 cut(s)	90, 1695
Kzo9I	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
LmnI	GCTCC	2 cut(s)	849, 1762
Lsp1109I	GCAGC	2 cut(s)	62, 1804
LweI	GCATC	3 cut(s)	316, 952, 1379
MaeI	CTAG	6 cut(s)	303, 846, 1008, 1089, 1206, 1346
MaeII	ACGT	4 cut(s)	45, 81, 180, 1014
MaeIII	GTNAC	6 cut(s)	59, 211, 266, 319, 1628, 1729
MalI	GATC	9 cut(s)	39, 435, 456, 672, 918, 1005, 1406, 1512, 1638
MboI	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
MfeI	CAATTG	1 cut(s)	1516
MflI	RGATCY	1 cut(s)	1003
MhlI	GDGCHC	2 cut(s)	235, 1436
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	63, 982
MmeI	TCCRAC	4 cut(s)	411, 477, 936, 1108
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	3 cut(s)	1098, 1372, 1509
MroXI	GAANNNNTTC	3 cut(s)	594, 838, 1175
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	147, 251, 374, 956, 1673, 1740, 1826
MslI	CAYNNNNRTG	4 cut(s)	48, 996, 1193, 1464
Msp20I	TGGCCA	1 cut(s)	5
MspCI	CTTAAG	2 cut(s)	250, 1825
MspI	CCGG	2 cut(s)	216, 1688
MspR9I	CCNGG	4 cut(s)	242, 285, 1688, 1689
MunI	CAATTG	1 cut(s)	1516
Mva1269I	GAATGC	1 cut(s)	1546
MvaI	CCWGG	2 cut(s)	242, 285
MwoI	GCNNNNNNNGC	1 cut(s)	1592
NciI	CCSGG	2 cut(s)	1688, 1689
NdeII	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
NlaIV	GGNNCC	6 cut(s)	88, 1005, 1102, 1535, 1693, 1764
NmuCI	GTSAC	4 cut(s)	59, 211, 319, 1628
NsiI	ATGCAT	3 cut(s)	1098, 1372, 1509
NspI	RCATGY	2 cut(s)	1198, 1271
PaeR7I	CTCGAG	1 cut(s)	1435
PctI	GAATGC	1 cut(s)	1546
PdmI	GAANNNNTTC	3 cut(s)	594, 838, 1175
PfeI	GAWTC	5 cut(s)	605, 908, 1038, 1201, 1705
PflMI	CCANNNNNTGG	3 cut(s)	12, 653, 1804
PkrI	GCNGC	2 cut(s)	77, 1819
PleI	GAGTC	2 cut(s)	62, 982
PpsI	GAGTC	2 cut(s)	62, 982
Ppu21I	YACGTR	1 cut(s)	46
PpuMI	RGGWCCY	1 cut(s)	257
Psp5II	RGGWCCY	1 cut(s)	257
Psp6I	CCWGG	2 cut(s)	240, 283
PspEI	GGTNACC	1 cut(s)	211
PspGI	CCWGG	2 cut(s)	240, 283
PspN4I	GGNNCC	6 cut(s)	88, 1005, 1102, 1535, 1693, 1764
PspPI	GGNCC	5 cut(s)	257, 532, 656, 791, 1534
PspPPI	RGGWCCY	1 cut(s)	257
PspXI	VCTCGAGB	1 cut(s)	1435
PsrI	GAACNNNNNNTAC	2 cut(s)	1084, 1116
PsuI	RGATCY	1 cut(s)	1003
RsaI	GTAC	8 cut(s)	88, 179, 248, 386, 547, 1187, 1457, 1693
RsaNI	GTAC	8 cut(s)	87, 178, 247, 385, 546, 1186, 1456, 1692
RseI	CAYNNNNRTG	4 cut(s)	48, 996, 1193, 1464
SaqAI	TTAA	7 cut(s)	147, 251, 374, 956, 1673, 1740, 1826
SatI	GCNGC	2 cut(s)	76, 1818
Sau3AI	GATC	9 cut(s)	37, 433, 454, 670, 916, 1003, 1404, 1510, 1636
Sau96I	GGNCC	5 cut(s)	257, 532, 656, 791, 1534
SchI	GAGTC	2 cut(s)	63, 982
ScrFI	CCNGG	4 cut(s)	242, 285, 1688, 1689
SduI	GDGCHC	2 cut(s)	235, 1436
SfaNI	GCATC	3 cut(s)	316, 952, 1379
SfcI	CTRYAG	1 cut(s)	1588
Sfr274I	CTCGAG	1 cut(s)	1435
SinI	GGWCC	3 cut(s)	257, 791, 1534
SlaI	CTCGAG	1 cut(s)	1435
SmaI	CCCGGG	1 cut(s)	1689
SmiMI	CAYNNNNRTG	4 cut(s)	48, 996, 1193, 1464
SmlI	CTYRAG	5 cut(s)	250, 1435, 1620, 1652, 1825
SmoI	CTYRAG	5 cut(s)	250, 1435, 1620, 1652, 1825
SpeI	ACTAGT	1 cut(s)	302
SspI	AATATT	1 cut(s)	1850
SspMI	CTAG	6 cut(s)	303, 846, 1008, 1089, 1206, 1346
StyD4I	CCNGG	4 cut(s)	240, 283, 1686, 1687
TaaI	ACNGT	5 cut(s)	103, 335, 893, 1363, 1463
TaiI	ACGT	4 cut(s)	48, 84, 183, 1017
TaqI	TCGA	4 cut(s)	436, 731, 1017, 1436
TaqII	GACCGA	1 cut(s)	461
TatI	WGTACW	2 cut(s)	384, 1185
TfiI	GAWTC	5 cut(s)	605, 908, 1038, 1201, 1705
Tru1I	TTAA	7 cut(s)	147, 251, 374, 956, 1673, 1740, 1826
Tru9I	TTAA	7 cut(s)	147, 251, 374, 956, 1673, 1740, 1826
TscAI	CASTG	8 cut(s)	64, 106, 882, 898, 907, 1195, 1466, 1551
TseFI	GTSAC	4 cut(s)	59, 211, 319, 1628
TseI	GCWGC	2 cut(s)	75, 1817
Tsp45I	GTSAC	4 cut(s)	59, 211, 319, 1628
TspDTI	ATGAA	9 cut(s)	343, 368, 462, 587, 761, 1125, 1492, 1683, 1697
TspGWI	ACGGA	1 cut(s)	1059
TspMI	CCCGGG	1 cut(s)	1687
TspRI	CASTG	8 cut(s)	64, 106, 882, 898, 907, 1195, 1466, 1551
Van91I	CCANNNNNTGG	3 cut(s)	12, 653, 1804
Vha464I	CTTAAG	2 cut(s)	250, 1825
VpaK11BI	GGWCC	3 cut(s)	257, 791, 1534
XapI	RAATTY	2 cut(s)	980, 1495
XceI	RCATGY	2 cut(s)	1198, 1271
XhoI	CTCGAG	1 cut(s)	1435
XmaI	CCCGGG	1 cut(s)	1687
XmiI	GTMKAC	1 cut(s)	811
XmnI	GAANNNNTTC	3 cut(s)	594, 838, 1175
XspI	CTAG	6 cut(s)	303, 846, 1008, 1089, 1206, 1346
Zsp2I	ATGCAT	3 cut(s)	1098, 1372, 1509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.