E3 ubiquitin ligase BIG BROTHER-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g29040 |
| malus_domestica | MD03G1178200.v1.1 MD11G1198000.v1.1 |
| prunus_persica | Prupe.4G244600_v2.0.a1 Prupe.4G244600_v2.0.a1 Prupe.4G244600_v2.0.a1 Prupe.4G244600_v2.0.a1 |
| pyrus_communis | pycom03g13490 pycom11g17140 |
| rosa_chinensis | RchiOBHm_Chr5g0051621 |
| rosa_laevigata | RLG00000034872 |
| rosa_multiflora | Rmu_ssc0000089.1_g000034 |
| rosa_roxburghii | Rroxscaffold_1G00027100 |
| rosa_rugosa | Rorug05G0278700 Rorug05G0278800 Rorug05G0278900 |
| rosa_samantha | Rh5AG350000 Rh5BG361800 Rh5CG386700 Rh5DG376700 |
| rosa_wichuraiana | Rw5G033120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 385 |
| AdeI | CACNNNGTG | 1 cut(s) | 385 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 28 |
| AgsI | TTSAA | 2 cut(s) | 142, 317 |
| AluBI | AGCT | 2 cut(s) | 200, 322 |
| AluI | AGCT | 2 cut(s) | 200, 322 |
| AoxI | GGCC | 1 cut(s) | 305 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 98, 130 |
| AspS9I | GGNCC | 1 cut(s) | 305 |
| AsuHPI | GGTGA | 1 cut(s) | 265 |
| BanI | GGYRCC | 1 cut(s) | 385 |
| BccI | CCATC | 2 cut(s) | 78, 282 |
| BfaI | CTAG | 2 cut(s) | 201, 309 |
| BmgT120I | GGNCC | 1 cut(s) | 305 |
| BmiI | GGNNCC | 1 cut(s) | 387 |
| BmsI | GCATC | 1 cut(s) | 343 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 342, 372 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 28 |
| Bse3DI | GCAATG | 2 cut(s) | 52, 255 |
| BseGI | GGATG | 1 cut(s) | 89 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseMI | GCAATG | 2 cut(s) | 52, 255 |
| BseMII | CTCAG | 1 cut(s) | 291 |
| BseRI | GAGGAG | 1 cut(s) | 66 |
| BshFI | GGCC | 1 cut(s) | 307 |
| BshNI | GGYRCC | 1 cut(s) | 385 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BsnI | GGCC | 1 cut(s) | 307 |
| BspANI | GGCC | 1 cut(s) | 307 |
| BspCNI | CTCAG | 1 cut(s) | 290 |
| BspLI | GGNNCC | 1 cut(s) | 387 |
| BspT107I | GGYRCC | 1 cut(s) | 385 |
| BsrDI | GCAATG | 2 cut(s) | 52, 255 |
| Bst4CI | ACNGT | 1 cut(s) | 344 |
| BstC8I | GCNNGC | 1 cut(s) | 43 |
| BstDEI | CTNAG | 2 cut(s) | 117, 277 |
| BstF5I | GGATG | 1 cut(s) | 89 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 38 |
| BstNSI | RCATGY | 2 cut(s) | 45, 264 |
| BsuRI | GGCC | 1 cut(s) | 307 |
| BtsCI | GGATG | 1 cut(s) | 89 |
| Cac8I | GCNNGC | 1 cut(s) | 43 |
| Cfr13I | GGNCC | 1 cut(s) | 305 |
| CviAII | CATG | 3 cut(s) | 42, 91, 261 |
| CviJI | RGCY | 6 cut(s) | 6, 18, 200, 307, 322, 378 |
| CviKI_1 | RGCY | 6 cut(s) | 6, 18, 200, 307, 322, 378 |
| DdeI | CTNAG | 2 cut(s) | 117, 277 |
| DraIII | CACNNNGTG | 1 cut(s) | 385 |
| Eco32I | GATATC | 1 cut(s) | 235 |
| EcoRV | GATATC | 1 cut(s) | 235 |
| FaeI | CATG | 3 cut(s) | 45, 94, 264 |
| FaiI | YATR | 8 cut(s) | 43, 80, 92, 168, 262, 285, 297, 339 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 110, 142, 134, 166 |
| FatI | CATG | 3 cut(s) | 41, 90, 260 |
| FokI | GGATG | 1 cut(s) | 96 |
| FspBI | CTAG | 2 cut(s) | 201, 309 |
| HaeIII | GGCC | 1 cut(s) | 307 |
| Hin1II | CATG | 3 cut(s) | 45, 94, 264 |
| HindIII | AAGCTT | 1 cut(s) | 320 |
| HinfI | GANTC | 2 cut(s) | 173, 187 |
| HphI | GGTGA | 1 cut(s) | 265 |
| Hpy188III | TCNNGA | 1 cut(s) | 238 |
| HpyCH4III | ACNGT | 1 cut(s) | 344 |
| HpyCH4V | TGCA | 4 cut(s) | 12, 45, 90, 248 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 38 |
| HpyF3I | CTNAG | 2 cut(s) | 117, 277 |
| Hsp92II | CATG | 3 cut(s) | 45, 94, 264 |
| LmnI | GCTCC | 1 cut(s) | 133 |
| LpnPI | CCDG | 4 cut(s) | 114, 223, 253, 264 |
| LweI | GCATC | 1 cut(s) | 343 |
| MaeI | CTAG | 2 cut(s) | 201, 309 |
| MaeIII | GTNAC | 3 cut(s) | 120, 146, 263 |
| MlyI | GAGTC | 2 cut(s) | 182, 196 |
| MmeI | TCCRAC | 1 cut(s) | 174 |
| MnlI | CCTC | 5 cut(s) | 22, 44, 223, 249, 399 |
| MseI | TTAA | 4 cut(s) | 57, 129, 180, 324 |
| MslI | CAYNNNNRTG | 1 cut(s) | 24 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 38 |
| NlaIII | CATG | 3 cut(s) | 45, 94, 264 |
| NlaIV | GGNNCC | 1 cut(s) | 387 |
| NmuCI | GTSAC | 2 cut(s) | 120, 146 |
| NspI | RCATGY | 2 cut(s) | 45, 264 |
| PaeI | GCATGC | 1 cut(s) | 45 |
| PleI | GAGTC | 2 cut(s) | 181, 195 |
| PpsI | GAGTC | 2 cut(s) | 181, 195 |
| PspN4I | GGNNCC | 1 cut(s) | 387 |
| PspPI | GGNCC | 1 cut(s) | 305 |
| RseI | CAYNNNNRTG | 1 cut(s) | 24 |
| SaqAI | TTAA | 4 cut(s) | 57, 129, 180, 324 |
| Sau96I | GGNCC | 1 cut(s) | 305 |
| SchI | GAGTC | 2 cut(s) | 182, 196 |
| SetI | ASST | 4 cut(s) | 202, 303, 324, 387 |
| SfaNI | GCATC | 1 cut(s) | 343 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 24 |
| SphI | GCATGC | 1 cut(s) | 45 |
| SspMI | CTAG | 2 cut(s) | 201, 309 |
| TaaI | ACNGT | 1 cut(s) | 344 |
| Tru1I | TTAA | 4 cut(s) | 57, 129, 180, 324 |
| Tru9I | TTAA | 4 cut(s) | 57, 129, 180, 324 |
| TseFI | GTSAC | 2 cut(s) | 120, 146 |
| Tsp45I | GTSAC | 2 cut(s) | 120, 146 |
| TspDTI | ATGAA | 2 cut(s) | 342, 352 |
| XceI | RCATGY | 2 cut(s) | 45, 264 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 108 |
| XspI | CTAG | 2 cut(s) | 201, 309 |