Rorug06G0098400

Small acidic protein family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0003825
Physical Location & Seq
Reverse (-)
13159193 .. 13162091
2899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0098400.1

Sequence Viewer

Length: 2406 bp
ATGCTTCTGAGCACAGCTCCTGACCTCACCCTTTCCACTCTCACTCTAACCCACTCCTCCTCCTCCTCCTCCTCTCCCCTCCCCTTCTTCCGCTCCCTCACTCTCTCCCCCACTCCCCACCGCCGATTCTCCTCCCCACCCATCATCTCCGCCCTCCAATTCCGCCGCCCTCACGCCCTCCCCGCCTCCACCGCTCTCGTCCAACACCTCCCGCCCGAGGAGGACGACCACGATTGGGATTCCAGCAATGTCGCCCAGAGCGACGCCTTCGATTTCGAGAGGTGCTTCGCCTCCACCGACCTCAAGTACCTCGCCTCGCCCAACCTCGAGGTTCGCGAGCTCGATGAGCTGCCGGAGCAGTGGCGGAGGTCCAAGCTCGCTTGGCTCTGTAAGGAGCTGCCGTCGCATAAGTCCGGGACTTTGATTCGGATTCTCAATGCCCAGAAGAAGTGGATGAGGCAAGAGGACGCCACCTATGTCGCCGTGCATTGTATGCGAATTCGCGAGAACGAAGCCGGATTCCGGGTGTATAAATGGATGATGCAACACAAGTGGTACCGATTTGATTTTGCTCTTGCTACCAAGTTGGCGGATTACATGGGGAAAGAGAGGAAATTTGCGAAATGTAGGGAGATATTTGATGATATAATTAAGCAGGGGCGTGTGCCTAGTGAGTCTACATTTCATATATTGGTTGTTGCATACCTTAGTGCTCCGGGTGAAGGTTGCTTGGAAGAAGCGTGTAGTGTTTACAATCGAATGATTCAGCTCGGAGGTTACCAGCCCCGGCTTAGCTTGCACAATTCTCTGTTTAAAGCTATTGTGAGCAAACCAGGGAGCTCTGTGAAACCTTACCTCAAACAGGCCGAGTTTATATTTCATAATTTGTTAACAACTGGACTTGAGATTCACAAGGACATTTACAGTGGCTTGATTTGGTTACATAGTTATCAGGATACTGTCGATACAGAGAGGATGACATCGTTGAGGAAAGAGATGCAAGAAGCAGGGATTGAAGAGGGCAAAGAAGTGCTTGTGTCTATCTTGAGAGCGTGCTCAAAGATGGGGGATGTGGAGGAAGCAGAGAACACTTGGCTCAGACTTCTCCGTCTTAATGTAGGTCTTCCGTCACAGGCGTTTGTTTATAAGATGGAAGTGTATGCAAAGGTTGGAGAACCCAAGAAGTCTTTGGAGATATTCAGGGAGATGCACGAGCACTTGGGTTTAGCCAATGTTGTGGCATATCATAAAGTCATAGAAATTGTCTGTAAAGCTAAAGAAATTGAACTTGCAGAATCCCTCATGGCAGATTTCATCAACACTGGTTTGAAGCCTTCCATGCCAGCTTATATAGATCTAATGAACATGTACTTCAACTTGAGCTTATATGACAAAGTGGAATCAGCCTTCTCCCAATGCCTTGAGATATGTCGACCTAGCAGAACGGTTTACTGTATATTCTTGGATTCTTTGGTGAAAGTTCGTAATCTTGATAAAGCTGAGGAGATATTTGACTACATGCAGAGTAATGGGGCAATAGGTATTAATGCCCGTTCCTGCAATACCATATTAAGTGGATACTTGTCAGCTGGAGATGATTTCAAGGCAGAGAAAATATATGGTCTGATGTGTCAGAAGAAATATGATGTTGATCCTCCATTGATGGAAATAATCAACTCTTTCTTGAGTTTGAGAAAGAAACAGGTTAAGAGACATATAAGCATGACACTGAGCAAAGAACAACGAGAGATATTAGTAGGTCTACTGATGGGTGGTTTGCAGATCGAATCAGATGACGACAGAAAGAATCACATGATCCGTTTTGAGTTCAGTGAGAATTCCAGCGCGCATTCTGTTTTGAGGAGACATATATATGATCAATACCATGAATGGCTCCATCCTTCGTGCAAGCCCAGTGAGAATACTGAGCACATACCGTATAAATTTTCCAGCATCTCACATTCTTATTTTGGTTTCTATGCCGACCAGTTTTGGCCCAATGGCCGGCGGATGATTCCCAAACTAGTCCACCGATGGCTCTCACCATGTGTTCTTGCATACTGGTATATGTATGGGGGCTACAGGACTGCATCAGGAGACATATTGCTGAAAATAAAGGGAAGTGAGGAGGGTGTTCAGAAGATTGTCAGAACCTTGAAGGCAATGTCTCTGGAGTGCAAGGTGAAGAGGAAGGGGAGAGTATTTTGGATAGGTTTCCTGGGAAGTAATTCTACACTGTTCTGGAAACTAACGGTACCTTACATTCTAGATGACTTGAAACATCTTCTAAAATCGGATGGGGAAAGCTCAGAGAACAATACAGTTGAAAATGAAAACATCAACTTCGCTAGTGGGTCTGACACCGATGAGAATGCCTCTGATAATAGTGATGATGATAGGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SMAP

Protein Analysis

801

Amino Acids

91.93

Weight (kDa)

6.83

Isoelectric Point (pI)

54.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LAGLIDADG_2 PF03161 582 - 747 1.1e-50 LAGLIDADG DNA endonuclease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1146
AasI GACNNNNNNGTC 1 cut(s) 1107
AbsI CCTCGAGG 1 cut(s) 326
Acc65I GGTACC 2 cut(s) 555, 2254
AccB1I GGYRCC 2 cut(s) 555, 2254
AccBSI CCGCTC 2 cut(s) 93, 194
AccI GTMKAC 3 cut(s) 677, 1432, 1762
AccII CGCG 3 cut(s) 336, 504, 1847
AclWI GGATC 2 cut(s) 1646, 1810
AcoI YGGCCR 1 cut(s) 2002
AcsI RAATTY 4 cut(s) 498, 614, 1837, 1943
AcyI GRCGYC 2 cut(s) 264, 468
AdeI CACNNNGTG 1 cut(s) 2048
AfaI GTAC 4 cut(s) 308, 557, 1370, 2256
AfiI CCNNNNNNNGG 6 cut(s) 217, 235, 522, 722, 862, 2004
AflIII ACRYGT 1 cut(s) 1365
AgsI TTSAA 8 cut(s) 1016, 1286, 1330, 1375, 1603, 2158, 2278, 2327
AhlI ACTAGT 1 cut(s) 2023
AjnI CCWGG 2 cut(s) 832, 2217
Alw21I GWGCWC 7 cut(s) 14, 342, 715, 842, 1058, 1218, 1932
Alw26I GTCTC 4 cut(s) 1705, 1858, 2091, 2172
AlwI GGATC 2 cut(s) 1646, 1810
AlwNI CAGNNNCTG 1 cut(s) 20
Ama87I CYCGRG 2 cut(s) 215, 326
AoxI GGCC 3 cut(s) 864, 1994, 2002
ApeKI GCWGC 2 cut(s) 349, 397
ApoI RAATTY 4 cut(s) 498, 614, 1837, 1943
AseI ATTAAT 1 cut(s) 1545
Asp700I GAANNNNTTC 1 cut(s) 2227
Asp718I GGTACC 2 cut(s) 555, 2254
AspLEI GCGC 2 cut(s) 1847, 1849
AspS9I GGNCC 2 cut(s) 369, 1995
AsuC2I CCSGG 4 cut(s) 415, 524, 717, 787
AsuHPI GGTGA 5 cut(s) 19, 731, 1486, 2034, 2194
AvaI CYCGRG 2 cut(s) 215, 326
AvaII GGWCC 1 cut(s) 369
BanI GGYRCC 2 cut(s) 555, 2254
BanII GRGCYC 2 cut(s) 342, 842
BarI GAAGNNNNNNTAC 2 cut(s) 2215, 2247
BauI CACGAG 1 cut(s) 1211
BbsI GAAGAC 1 cut(s) 1115
Bbv12I GWGCWC 7 cut(s) 14, 342, 715, 842, 1058, 1218, 1932
BbvCI CCTCAGC 1 cut(s) 1500
BbvI GCAGC 2 cut(s) 336, 384
BccI CCATC 8 cut(s) 149, 1057, 1144, 1657, 1762, 1905, 2028, 2291
BceAI ACGGC 2 cut(s) 385, 467
BcgI CGANNNNNNTGC 2 cut(s) 2354, 2388
BciT130I CCWGG 2 cut(s) 834, 2219
BciVI GTATCC 2 cut(s) 949, 1571
BclI TGATCA 1 cut(s) 1876
BcnI CCSGG 4 cut(s) 415, 524, 717, 787
BcoDI GTCTC 4 cut(s) 1705, 1858, 2091, 2172
BcuI ACTAGT 1 cut(s) 2023
BfaI CTAG 5 cut(s) 669, 1437, 2024, 2267, 2349
BfmI CTRYAG 1 cut(s) 2080
BfuI GTATCC 2 cut(s) 949, 1571
BglII AGATCT 1 cut(s) 1354
BisI GCNGC 3 cut(s) 166, 350, 398
BlpI GCTNAGC 1 cut(s) 791
BlsI GCNGC 3 cut(s) 167, 351, 399
Bme1390I CCNGG 6 cut(s) 415, 524, 717, 787, 834, 2219
Bme18I GGWCC 1 cut(s) 369
BmeT110I CYCGRG 2 cut(s) 215, 326
BmgT120I GGNCC 2 cut(s) 369, 1995
BmiI GGNNCC 3 cut(s) 557, 1895, 2256
BmrFI CCNGG 6 cut(s) 415, 524, 717, 787, 834, 2219
BmrI ACTGGG 1 cut(s) 1908
BmsI GCATC 5 cut(s) 531, 987, 1197, 1962, 2099
BmuI ACTGGG 1 cut(s) 1908
BpiI GAAGAC 1 cut(s) 1115
BplI GAGNNNNNCTC 3 cut(s) 33, 2360, 2392
BpmI CTGGAG 2 cut(s) 1611, 2192
Bpu10I CCTNAGC 1 cut(s) 1500
Bpu1102I GCTNAGC 1 cut(s) 791
BpuEI CTTGAG 6 cut(s) 287, 923, 1066, 1399, 1442, 1705
BpuMI CCSGG 4 cut(s) 415, 524, 717, 787
BsaBI GATNNNNATC 1 cut(s) 1650
BsaHI GRCGYC 2 cut(s) 264, 468
BsaJI CCNNGG 4 cut(s) 216, 785, 833, 2218
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 386, 416
Bsc4I CCNNNNNNNGG 6 cut(s) 217, 235, 522, 722, 862, 2004
Bse118I RCCGGY 1 cut(s) 2004
Bse1I ACTGG 5 cut(s) 901, 1327, 1914, 1987, 2066
Bse3DI GCAATG 2 cut(s) 253, 2169
Bse8I GATNNNNATC 1 cut(s) 1650
BseBI CCWGG 2 cut(s) 834, 2219
BseDI CCNNGG 4 cut(s) 216, 785, 833, 2218
BseGI GGATG 7 cut(s) 459, 543, 981, 1075, 1897, 2016, 2302
BseJI GATNNNNATC 1 cut(s) 1650
BseLI CCNNNNNNNGG 6 cut(s) 217, 235, 522, 722, 862, 2004
BseMI GCAATG 2 cut(s) 253, 2169
BseMII CTCAG 5 cut(s) 1111, 1491, 1721, 1917, 2322
BseNI ACTGG 5 cut(s) 901, 1327, 1914, 1987, 2066
BsePI GCGCGC 1 cut(s) 1845
BseXI GCAGC 2 cut(s) 336, 384
Bsh1236I CGCG 3 cut(s) 336, 504, 1847
BshFI GGCC 3 cut(s) 866, 1996, 2004
BshNI GGYRCC 2 cut(s) 555, 2254
BsiHKAI GWGCWC 7 cut(s) 14, 342, 715, 842, 1058, 1218, 1932
BsiHKCI CYCGRG 2 cut(s) 215, 326
BsiSI CCGG 7 cut(s) 353, 414, 516, 523, 716, 787, 2005
BslFI GGGAC 1 cut(s) 430
BslI CCNNNNNNNGG 6 cut(s) 217, 235, 522, 722, 862, 2004
BsmAI GTCTC 4 cut(s) 1705, 1858, 2091, 2172
BsmFI GGGAC 1 cut(s) 430
BsmI GAATGC 2 cut(s) 1849, 2377
BsnI GGCC 3 cut(s) 866, 1996, 2004
BsoBI CYCGRG 2 cut(s) 215, 326
Bsp1286I GDGCHC 7 cut(s) 14, 342, 715, 842, 1058, 1218, 1932
Bsp143I GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
Bsp1720I GCTNAGC 1 cut(s) 791
Bsp68I TCGCGA 2 cut(s) 336, 504
BspANI GGCC 3 cut(s) 866, 1996, 2004
BspCNI CTCAG 5 cut(s) 1110, 1492, 1722, 1918, 2321
BspFNI CGCG 3 cut(s) 336, 504, 1847
BspLI GGNNCC 3 cut(s) 557, 1895, 2256
BspPI GGATC 2 cut(s) 1646, 1810
BspT107I GGYRCC 2 cut(s) 555, 2254
BsrBI CCGCTC 2 cut(s) 93, 194
BsrDI GCAATG 2 cut(s) 253, 2169
BsrFI RCCGGY 1 cut(s) 2004
BsrI ACTGG 5 cut(s) 901, 1327, 1914, 1987, 2066
BssAI RCCGGY 1 cut(s) 2004
BssECI CCNNGG 4 cut(s) 216, 785, 833, 2218
BssHII GCGCGC 1 cut(s) 1845
BssMI GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
BssNI GRCGYC 2 cut(s) 264, 468
BssSI CACGAG 1 cut(s) 1211
Bst2BI CACGAG 1 cut(s) 1211
Bst2UI CCWGG 2 cut(s) 834, 2219
Bst4CI ACNGT 8 cut(s) 926, 961, 1447, 1454, 1938, 2238, 2254, 2323
Bst6I CTCTTC 2 cut(s) 1011, 2180
BstACI GRCGYC 2 cut(s) 264, 468
BstAPI GCANNNNNTGC 1 cut(s) 493
BstC8I GCNNGC 8 cut(s) 338, 378, 797, 1054, 1344, 1847, 1910, 2006
BstDEI CTNAG 8 cut(s) 8, 707, 791, 1097, 1500, 1730, 1926, 2308
BstEII GGTNACC 1 cut(s) 776
BstENI CCTNNNNNAGG 1 cut(s) 860
BstF5I GGATG 7 cut(s) 459, 543, 981, 1075, 1897, 2016, 2302
BstFNI CGCG 3 cut(s) 336, 504, 1847
BstHHI GCGC 2 cut(s) 1847, 1849
BstKTI GATC 5 cut(s) 1357, 1654, 1785, 1818, 1879
BstMAI GTCTC 4 cut(s) 1705, 1858, 2091, 2172
BstMBI GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
BstMWI GCNNNNNNNGC 9 cut(s) 182, 191, 346, 355, 382, 403, 493, 796, 1339
BstNI CCWGG 2 cut(s) 834, 2219
BstNSI RCATGY 2 cut(s) 1369, 1522
BstPI GGTNACC 1 cut(s) 776
BstSCI CCNGG 6 cut(s) 413, 522, 715, 785, 832, 2217
BstSFI CTRYAG 1 cut(s) 2080
BstUI CGCG 3 cut(s) 336, 504, 1847
BstV1I GCAGC 2 cut(s) 336, 384
BstV2I GAAGAC 1 cut(s) 1115
BstX2I RGATCY 1 cut(s) 1354
BstXI CCANNNNNNTGG 1 cut(s) 1237
BstYI RGATCY 1 cut(s) 1354
BsuI GTATCC 2 cut(s) 949, 1571
BsuRI GGCC 3 cut(s) 866, 1996, 2004
BtsCI GGATG 7 cut(s) 459, 543, 981, 1075, 1897, 2016, 2302
BtsI GCAGTG 1 cut(s) 365
BtsIMutI CAGTG 7 cut(s) 365, 931, 1320, 1727, 1837, 1921, 2234
BtuMI TCGCGA 2 cut(s) 336, 504
Cac8I GCNNGC 8 cut(s) 338, 378, 797, 1054, 1344, 1847, 1910, 2006
CaiI CAGNNNCTG 1 cut(s) 20
CfoI GCGC 2 cut(s) 1847, 1849
Cfr10I RCCGGY 1 cut(s) 2004
Cfr13I GGNCC 2 cut(s) 369, 1995
CseI GACGC 2 cut(s) 272, 476
Csp6I GTAC 4 cut(s) 307, 556, 1369, 2255
CspCI CAANNNNNGTGG 2 cut(s) 533, 568
CviAII CATG 9 cut(s) 598, 1303, 1339, 1366, 1519, 1723, 1813, 1886, 2046
CviQI GTAC 4 cut(s) 307, 556, 1369, 2255
DdeI CTNAG 8 cut(s) 8, 707, 791, 1097, 1500, 1730, 1926, 2308
DpnI GATC 5 cut(s) 1356, 1653, 1784, 1817, 1878
DpnII GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
DraI TTTAAA 1 cut(s) 814
DraIII CACNNNGTG 1 cut(s) 2048
DrdI GACNNNNNNGTC 1 cut(s) 1107
DseDI GACNNNNNNGTC 1 cut(s) 1107
EaeI YGGCCR 1 cut(s) 2002
Eam1104I CTCTTC 2 cut(s) 1011, 2180
EarI CTCTTC 2 cut(s) 1011, 2180
EciI GGCGGA 5 cut(s) 139, 152, 379, 605, 2023
Ecl136II GAGCTC 2 cut(s) 340, 840
Eco24I GRGCYC 2 cut(s) 342, 842
Eco47I GGWCC 1 cut(s) 369
Eco53kI GAGCTC 2 cut(s) 340, 840
Eco88I CYCGRG 2 cut(s) 215, 326
Eco91I GGTNACC 1 cut(s) 776
EcoICRI GAGCTC 2 cut(s) 340, 840
EcoNI CCTNNNNNAGG 1 cut(s) 860
EcoO65I GGTNACC 1 cut(s) 776
EcoRI GAATTC 2 cut(s) 498, 1837
EcoRII CCWGG 2 cut(s) 832, 2217
EcoT38I GRGCYC 2 cut(s) 342, 842
FaeI CATG 9 cut(s) 601, 1306, 1342, 1369, 1522, 1726, 1816, 1889, 2049
FalI AAGNNNNNCTT 2 cut(s) 1017, 1049
FaqI GGGAC 1 cut(s) 430
FatI CATG 9 cut(s) 597, 1302, 1338, 1365, 1518, 1722, 1812, 1885, 2045
FauI CCCGC 2 cut(s) 190, 219
FbaI TGATCA 1 cut(s) 1876
FblI GTMKAC 3 cut(s) 677, 1432, 1762
Fnu4HI GCNGC 3 cut(s) 166, 350, 398
FokI GGATG 7 cut(s) 466, 550, 988, 1082, 1884, 2023, 2309
FriOI GRGCYC 2 cut(s) 342, 842
Fsp4HI GCNGC 3 cut(s) 166, 350, 398
FspBI CTAG 5 cut(s) 669, 1437, 2024, 2267, 2349
GlaI GCGC 2 cut(s) 1846, 1848
GluI GCNGC 3 cut(s) 166, 350, 398
GsuI CTGGAG 2 cut(s) 1611, 2192
HaeIII GGCC 3 cut(s) 866, 1996, 2004
HapII CCGG 7 cut(s) 353, 414, 516, 523, 716, 787, 2005
HgaI GACGC 2 cut(s) 272, 476
HhaI GCGC 2 cut(s) 1847, 1849
Hin1I GRCGYC 2 cut(s) 264, 468
Hin1II CATG 9 cut(s) 601, 1306, 1342, 1369, 1522, 1726, 1816, 1889, 2049
Hin6I GCGC 2 cut(s) 1845, 1847
HinP1I GCGC 2 cut(s) 1845, 1847
HincII GTYRAC 2 cut(s) 891, 1433
HindII GTYRAC 2 cut(s) 891, 1433
HpaI GTTAAC 1 cut(s) 891
HpaII CCGG 7 cut(s) 353, 414, 516, 523, 716, 787, 2005
HphI GGTGA 5 cut(s) 19, 731, 1486, 2034, 2194
Hpy166II GTNNAC 7 cut(s) 678, 751, 891, 1433, 1450, 1763, 2029
Hpy8I GTNNAC 7 cut(s) 678, 751, 891, 1433, 1450, 1763, 2029
Hpy99I CGWCG 2 cut(s) 266, 406
HpyAV CCTTC 8 cut(s) 94, 277, 716, 1344, 1417, 1911, 2152, 2185
HpyCH4III ACNGT 8 cut(s) 926, 961, 1447, 1454, 1938, 2238, 2254, 2323
HpyF10VI GCNNNNNNNGC 9 cut(s) 182, 191, 346, 355, 382, 403, 493, 796, 1339
HpyF3I CTNAG 8 cut(s) 8, 707, 791, 1097, 1500, 1730, 1926, 2308
Hsp92I GRCGYC 2 cut(s) 264, 468
Hsp92II CATG 9 cut(s) 601, 1306, 1342, 1369, 1522, 1726, 1816, 1889, 2049
HspAI GCGC 2 cut(s) 1845, 1847
KpnI GGTACC 2 cut(s) 559, 2258
KroI GCCGGC 1 cut(s) 2004
KroNI GCCGGC 1 cut(s) 2006
Ksp22I TGATCA 1 cut(s) 1876
KspAI GTTAAC 1 cut(s) 891
Kzo9I GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
LmnI GCTCC 7 cut(s) 22, 98, 355, 394, 718, 837, 1899
Lsp1109I GCAGC 2 cut(s) 336, 384
LweI GCATC 5 cut(s) 531, 987, 1197, 1962, 2099
MaeI CTAG 5 cut(s) 669, 1437, 2024, 2267, 2349
MaeIII GTNAC 3 cut(s) 776, 939, 1128
MalI GATC 5 cut(s) 1356, 1653, 1784, 1817, 1878
MbiI CCGCTC 2 cut(s) 93, 194
MboI GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
MboII GAAGA 9 cut(s) 79, 457, 746, 1028, 1115, 1648, 2152, 2197, 2276
MflI RGATCY 1 cut(s) 1354
MhlI GDGCHC 7 cut(s) 14, 342, 715, 842, 1058, 1218, 1932
MlyI GAGTC 1 cut(s) 683
MmeI TCCRAC 2 cut(s) 226, 1150
MroNI GCCGGC 1 cut(s) 2004
MroXI GAANNNNTTC 1 cut(s) 2227
MseI TTAA 8 cut(s) 651, 813, 890, 1113, 1545, 1571, 1707, 2404
MslI CAYNNNNRTG 1 cut(s) 1872
MspA1I CMGCKG 1 cut(s) 1589
MspI CCGG 7 cut(s) 353, 414, 516, 523, 716, 787, 2005
MspR9I CCNGG 6 cut(s) 415, 524, 717, 787, 834, 2219
Mva1269I GAATGC 2 cut(s) 1849, 2377
MvaI CCWGG 2 cut(s) 834, 2219
MvnI CGCG 3 cut(s) 336, 504, 1847
MwoI GCNNNNNNNGC 9 cut(s) 182, 191, 346, 355, 382, 403, 493, 796, 1339
NaeI GCCGGC 1 cut(s) 2006
NciI CCSGG 4 cut(s) 415, 524, 717, 787
NdeII GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
NgoMIV GCCGGC 1 cut(s) 2004
NlaIII CATG 9 cut(s) 601, 1306, 1342, 1369, 1522, 1726, 1816, 1889, 2049
NlaIV GGNNCC 3 cut(s) 557, 1895, 2256
NmeAIII GCCGAG 1 cut(s) 892
NmuCI GTSAC 1 cut(s) 1128
NruI TCGCGA 2 cut(s) 336, 504
NspI RCATGY 2 cut(s) 1369, 1522
PaeR7I CTCGAG 1 cut(s) 326
PauI GCGCGC 1 cut(s) 1845
PciI ACATGT 1 cut(s) 1365
PcsI WCGNNNNNNNCGW 3 cut(s) 258, 294, 333
PctI GAATGC 2 cut(s) 1849, 2377
PdiI GCCGGC 1 cut(s) 2006
PdmI GAANNNNTTC 1 cut(s) 2227
PfoI TCCNGGA 1 cut(s) 413
PkrI GCNGC 3 cut(s) 167, 351, 399
PleI GAGTC 1 cut(s) 682
PpsI GAGTC 1 cut(s) 682
PscI ACATGT 1 cut(s) 1365
PshBI ATTAAT 1 cut(s) 1545
PsiI TTATAA 1 cut(s) 1146
Psp124BI GAGCTC 2 cut(s) 342, 842
Psp6I CCWGG 2 cut(s) 832, 2217
PspEI GGTNACC 1 cut(s) 776
PspGI CCWGG 2 cut(s) 832, 2217
PspN4I GGNNCC 3 cut(s) 557, 1895, 2256
PspPI GGNCC 2 cut(s) 369, 1995
PspXI VCTCGAGB 1 cut(s) 326
PstNI CAGNNNCTG 1 cut(s) 20
PsuI RGATCY 1 cut(s) 1354
PteI GCGCGC 1 cut(s) 1845
PvuII CAGCTG 1 cut(s) 1589
RruI TCGCGA 2 cut(s) 336, 504
RsaI GTAC 4 cut(s) 308, 557, 1370, 2256
RsaNI GTAC 4 cut(s) 307, 556, 1369, 2255
RseI CAYNNNNRTG 1 cut(s) 1872
SacI GAGCTC 2 cut(s) 342, 842
SalI GTCGAC 1 cut(s) 1431
SaqAI TTAA 8 cut(s) 651, 813, 890, 1113, 1545, 1571, 1707, 2404
SatI GCNGC 3 cut(s) 166, 350, 398
Sau3AI GATC 5 cut(s) 1354, 1651, 1782, 1815, 1876
Sau96I GGNCC 2 cut(s) 369, 1995
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 6 cut(s) 415, 524, 717, 787, 834, 2219
SduI GDGCHC 7 cut(s) 14, 342, 715, 842, 1058, 1218, 1932
SfaNI GCATC 5 cut(s) 531, 987, 1197, 1962, 2099
SfcI CTRYAG 1 cut(s) 2080
Sfr274I CTCGAG 1 cut(s) 326
SinI GGWCC 1 cut(s) 369
SlaI CTCGAG 1 cut(s) 326
SmiMI CAYNNNNRTG 1 cut(s) 1872
SmlI CTYRAG 7 cut(s) 302, 326, 902, 1045, 1378, 1421, 1684
SmoI CTYRAG 7 cut(s) 302, 326, 902, 1045, 1378, 1421, 1684
SpeI ACTAGT 1 cut(s) 2023
SspMI CTAG 5 cut(s) 669, 1437, 2024, 2267, 2349
SstI GAGCTC 2 cut(s) 342, 842
StyD4I CCNGG 6 cut(s) 413, 522, 715, 785, 832, 2217
TaaI ACNGT 8 cut(s) 926, 961, 1447, 1454, 1938, 2238, 2254, 2323
TaqI TCGA 8 cut(s) 270, 276, 327, 342, 757, 963, 1432, 1785
TatI WGTACW 1 cut(s) 1368
TauI GCSGC 1 cut(s) 168
Tru1I TTAA 8 cut(s) 651, 813, 890, 1113, 1545, 1571, 1707, 2404
Tru9I TTAA 8 cut(s) 651, 813, 890, 1113, 1545, 1571, 1707, 2404
TscAI CASTG 7 cut(s) 365, 931, 1327, 1734, 1837, 1921, 2241
TseFI GTSAC 1 cut(s) 1128
TseI GCWGC 2 cut(s) 349, 397
Tsp45I GTSAC 1 cut(s) 1128
TspDTI ATGAA 6 cut(s) 674, 869, 1303, 1376, 1902, 2346
TspGWI ACGGA 3 cut(s) 1097, 1116, 1808
TspRI CASTG 7 cut(s) 365, 931, 1327, 1734, 1837, 1921, 2241
VpaK11BI GGWCC 1 cut(s) 369
VspI ATTAAT 1 cut(s) 1545
XagI CCTNNNNNAGG 1 cut(s) 860
XapI RAATTY 4 cut(s) 498, 614, 1837, 1943
XbaI TCTAGA 1 cut(s) 2266
XceI RCATGY 2 cut(s) 1369, 1522
XcmI CCANNNNNNNNNTGG 1 cut(s) 1186
XhoI CTCGAG 1 cut(s) 326
XmiI GTMKAC 3 cut(s) 677, 1432, 1762
XmnI GAANNNNTTC 1 cut(s) 2227
XspI CTAG 5 cut(s) 669, 1437, 2024, 2267, 2349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.