Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003825

Physical Location & Seq

Genomic Coordinates Forward (+)

37455838 .. 37494550

Gene Structure 38713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG210300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGTCAGAGAAGCAGCAATCTCCTAATGGAGGTGAAGTTGTGGTGGAAGTTGGAAGGGAAAAGAGCAATGAACGAAAAGACTCTTCAGCTAGCCAGACCCTCACTAAGAGAAAGTCATTCACTAGGTCAGTTGTCTCCAAACCCAAGTCGAGATTCGGTGATCCATTGCCCATTATGTATGAAGAGACTAGTTCAGATCAGGCAGCTGGGGCAAATTCACCCAATGCTTCATTCAATAGGGAGTCCCCAAATGAAATCTCATTGGATAGGACTGAATCCTCCTCTGCGAAGAATGCACCGCCTTCTCCGGGCAGAACACAAGATGAGGATGAAGCTGAAGAGGTTTACAAGACGGCTAATGCGAAGAATGCACCACCAACTCCAGTTATAGCAGAAGATGAGGAGGATGAAGAGATATACAACAAGGTTAACTTGAGTATAGATAAGCGTGGGAAAGTGAATAAGAAGCTCTCGGGGGAGTTGATTGTTTTTCTGTCCATTTTGGGTTGTTTAGTGGCTAGCTTGACTATCCATAAGCTAAAGGATCTTATGGTCTGGGACTTGGAGATTTGGAAATGGTGTGTGCTTGTAATGGTGGTATCATGTGGCATGTTGATGACAAATTGGGTAATGCATTTCATAGTTTTCCTGATTGAGCGCAGCTTTTTGTTTAGGAAGAATGTGTTGTATTTTGTTTACGGATTGAAGAAGAATGCTCAGATTCTCATGTGGGTGGGTCTTGTTCTTCTCACATGGCTACTCTTGATCAAACGCGGGCTTCAGCAATCAAAAGTTTCCACTAAGATTCTGGCTTACATCACGCGAAGTATTGTTGCAGTTGTTATTGGGGCATCTTTGTGGTTGTTAAAGACTTTGTTGGTTAAGATCTTAGCATCTAAATTCCAGGTGGTAACCTATTTTAGTAGAATTCAAGAATCGATATTCCATCAGTATGCTCTTCGGACACTTTCAGGACCTCCGCTTATGGAGGATGCAGAAGGCAGTATCACACTGAGTTTTACTAACAAGGCACATGCAGCAGGGAAGGAGATAGAGGTCACTGACAGGGCAAAGCTTCAAAAGATAAAGCAAGAGAAGGTTTCTTCTTTTACCATGAAGGGACTGGTGGATGTAGTAACTACTTTCGGGCTGTCCACGATGTCCCAGACATTGGACGAGAAGGAAGATCTGAATGAACAGAGAGATAAGGAGATTACCAGTGAGACGGAAGCAACTGCTGCTGGCAATGACATATTCCTTAATGTAGCTCCACATGGTGCCAAGTACATTGAGGAGCGGTATCTATTGAGGTTCATGATGAAGGAAGAGGTAGACCTTGTATGGCCACTGATTGACGTAGCAAAGACTGGACAAGTTGACAGAAAAACTCTAACAGAGTGGGTGGTGAAGGTCTACACTGCTCGCAAAGCATTAGCTCATGCATTGTCTGATACCAAAGCAGTTACAGCGCAAGTCGACAATCTTCCGGCACTCCTTCCCCAAATCCACACCTTCAATCTTCCCCCTCTCTCTATTGTGGTGGTCATCATGGACTCAAACTTGGACTCTCCATTCACAGACAAGGGGACTGCATTTTCCAAGCCTTCAAAAGATAAAGTTAAAAGGAATTATCGGCGTCGTTCGCCAGTTAGTGGGTCATCTTCATCTGATGGGAGTCCTGAGCATAATGACAGCTCTAGCCCAAAACTTGCAATGGGAGATCCTGGAAAAGTCTCTGAACATCAACCAAGAAGGATAGATGATTGGAGAGAATTAAATAGGGATTCAGAGAGGAGCTATTGTGGAAGAAGCAGTGATTCGTACAGGCATTCTGATAGGCAGTCCAGAAATTCGAAGGGCTACTATGGGCAGGCTGACTACATCAAAAACGACAAGCATGCAGATGATGAAGAAAGAACTAATCAGAAGTTATCTTCTCGTTCGGATAGGGAATCAAGGGGCAGTGCTCATTTTGATAATGTTAGGTCAAGAGACTATTCACGACATTTTGACAAAAATTCTCATGATAAATATGATGGTTCTGAACATAGGAGCAAGGGCAAAGAGAGAGGAACTAAATTTCTTGAGTACCAGAAATATAAAGATGACTCATTGTCAGAAAGAGTTGGATCTGGTAGAAGTCATGGACATGTCGAAGATATGGAAAGGGAGAGAGATAGGCATAAAGTTGACAGAGATTCTCAGGATGAGAAAAGAGATCATCGTAGGAGTTCGGGATATTTTAGAAGTGAACGAAATCTCTCCTATGAAGAATCGAGGGGGCATTGCAGTGGCTCAATTTCCAGGAGAGATGATAGTAAACATCGCGAGAGTGAAGGTTATAAGAGTGATTTGAAGGACATGGATGATGAAAAGCTTGCGAGAGATCAAAGGAAGAAATATGATGATATCGAAACTAAGAGGAGCAAGGACCGAGTCATTAAAGAACCAACAGAGCGTTCTGAGAATGAAGATAAATTTAGGAGTGAAGATCAAGAATCTGCTGCGAAACGAGCAAAATTTTTTAACCTGGAGAAGGGCATTGCTGGTCGGAAAGATGTTTCCAAGTTCACAACTACATCTGATGGAAGAGAGTCGTCAAGTTCCAAGCAAGTTCAAGATGGTAAAATGGAGAATGACATAAATGCTGCAAAAGTTGCTGCAATGAAAGCTGCTGAATTGGGTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006979 GO:0007275 GO:0007568 GO:0008150 GO:0008219 GO:0008381 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009987 GO:0010150 GO:0012501 GO:0015267 GO:0016020 GO:0022803 GO:0022836 GO:0022857 GO:0032501 GO:0032502 GO:0033554 GO:0034599 GO:0034614 GO:0036473 GO:0042221 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0050982 GO:0051179 GO:0051234 GO:0051606 GO:0051716 GO:0055085 GO:0070887 GO:0071944 GO:0090693 GO:0097468 GO:0099402 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MS_channel

Protein Analysis

896

Amino Acids

101.72

Weight (kDa)

8.84

Isoelectric Point (pI)

52.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003825)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56720 AT3G56720 AT3G56720 AT3G56720 AT3G56720 AT3G56720 AT3G56720
fragaria_vesca	FvH4_2g14070 FvH4_2g14070 FvH4_2g14070 FvH4_2g14070 FvH4_2g14070 FvH4_2g14070 FvH4_2g14070 FvH4_2g14070 FvH4_2g14070 FvH4_2g14070
malus_domestica	MD14G1089900.v1.1
prunus_persica	Prupe.7G034100_v2.0.a1
pyrus_communis	pycom12g08390
rosa_chinensis	RchiOBHm_Chr6g0276151
rosa_laevigata	RLG00000013413
rosa_multiflora	Rmu_ssc0000201.1_g000001
rosa_roxburghii	Rroxscaffold_7G00192520
rosa_rugosa	Rorug06G0098300 Rorug06G0098400 Rorug06G0098500
rosa_samantha	Rh6AG210300 Rh6BG214400 Rh6BG214500 Rh6CG217200 Rh6DG206500 Rh6DG206700
rosa_wichuraiana	Rw6G018320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2343
AccB1I	GGYRCC	1 cut(s)	1277
AccB7I	CCANNNNNTGG	2 cut(s)	1171, 1652
AccBSI	CCGCTC	1 cut(s)	1297
AccI	GTMKAC	3 cut(s)	1332, 1413, 1476
AccII	CGCG	3 cut(s)	774, 823, 2328
AciI	CCGC	4 cut(s)	299, 774, 980, 1297
AclWI	GGATC	4 cut(s)	155, 552, 1715, 2137
AcoI	YGGCCR	1 cut(s)	1343
AcsI	RAATTY	8 cut(s)	214, 899, 927, 1849, 2017, 2078, 2477, 2519
AcuI	CTGAAG	3 cut(s)	69, 357, 764
AcyI	GRCGYC	1 cut(s)	1636
AdeI	CACNNNGTG	1 cut(s)	1277
AfaI	GTAC	3 cut(s)	1286, 1823, 2090
AfiI	CCNNNNNNNGG	5 cut(s)	29, 308, 1171, 1652, 2536
AflIII	ACRYGT	1 cut(s)	2149
AgsI	TTSAA	8 cut(s)	235, 706, 932, 1079, 1516, 1608, 2356, 2618
AhdI	GACNNNNNGTC	1 cut(s)	2113
AhlI	ACTAGT	1 cut(s)	188
AjnI	CCWGG	4 cut(s)	903, 1723, 2303, 2529
AjuI	GAANNNNNNNTTGG	6 cut(s)	137, 169, 215, 247, 2443, 2475
Alw21I	GWGCWC	1 cut(s)	1969
Alw26I	GTCTC	5 cut(s)	139, 179, 1217, 1738, 1986
AlwI	GGATC	4 cut(s)	155, 552, 1715, 2137
Ama87I	CYCGRG	1 cut(s)	472
AoxI	GGCC	1 cut(s)	1343
ApeKI	GCWGC	9 cut(s)	13, 203, 660, 1037, 1238, 2504, 2648, 2660, 2672
ApoI	RAATTY	8 cut(s)	214, 899, 927, 1849, 2017, 2078, 2477, 2519
AspLEI	GCGC	2 cut(s)	660, 1471
AspS9I	GGNCC	2 cut(s)	974, 2431
AsuC2I	CCSGG	1 cut(s)	309
AsuHPI	GGTGA	4 cut(s)	44, 170, 210, 1417
AsuII	TTCGAA	1 cut(s)	1853
AsuNHI	GCTAGC	2 cut(s)	89, 518
AvaI	CYCGRG	1 cut(s)	472
AvaII	GGWCC	2 cut(s)	974, 2431
BalI	TGGCCA	1 cut(s)	1345
BanI	GGYRCC	1 cut(s)	1277
Bbv12I	GWGCWC	1 cut(s)	1969
BbvI	GCAGC	9 cut(s)	25, 215, 672, 1049, 1225, 2491, 2635, 2647, 2659
BccI	CCATC	5 cut(s)	954, 1664, 2030, 2579, 2615
BceAI	ACGGC	1 cut(s)	369
BcgI	CGANNNNNNTGC	2 cut(s)	1880, 1914
BciT130I	CCWGG	4 cut(s)	905, 1725, 2305, 2531
BclI	TGATCA	1 cut(s)	765
BcnI	CCSGG	1 cut(s)	309
BcoDI	GTCTC	5 cut(s)	139, 179, 1217, 1738, 1986
BcuI	ACTAGT	1 cut(s)	188
BfaI	CTAG	5 cut(s)	90, 123, 189, 519, 1698
BglII	AGATCT	2 cut(s)	885, 1186
BisI	GCNGC	9 cut(s)	14, 204, 661, 1038, 1239, 2505, 2649, 2661, 2673
BlsI	GCNGC	9 cut(s)	15, 205, 662, 1039, 1240, 2506, 2650, 2662, 2674
Bme1390I	CCNGG	5 cut(s)	309, 905, 1725, 2305, 2531
Bme18I	GGWCC	2 cut(s)	974, 2431
BmeRI	GACNNNNNGTC	1 cut(s)	2113
BmeT110I	CYCGRG	1 cut(s)	472
BmgT120I	GGNCC	2 cut(s)	974, 2431
BmiI	GGNNCC	1 cut(s)	1279
BmrFI	CCNGG	5 cut(s)	309, 905, 1725, 2305, 2531
BmsI	GCATC	3 cut(s)	860, 902, 982
BmtI	GCTAGC	2 cut(s)	93, 522
BpmI	CTGGAG	2 cut(s)	366, 2552
Bpu10I	CCTNAGC	1 cut(s)	1680
Bpu14I	TTCGAA	1 cut(s)	1853
BpuEI	CTTGAG	2 cut(s)	454, 2105
BpuMI	CCSGG	1 cut(s)	309
Bsa29I	ATCGAT	1 cut(s)	938
BsaHI	GRCGYC	1 cut(s)	1636
BsaXI	ACNNNNNCTCC	4 cut(s)	21, 51, 1786, 1816
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 308, 1171, 1652, 2536
Bse1I	ACTGG	5 cut(s)	383, 1128, 1218, 1372, 1646
Bse3DI	GCAATG	7 cut(s)	73, 164, 1252, 1719, 2284, 2541, 2670
BseBI	CCWGG	4 cut(s)	905, 1725, 2305, 2531
BseCI	ATCGAT	1 cut(s)	938
BseGI	GGATG	6 cut(s)	334, 412, 997, 1135, 2212, 2371
BseLI	CCNNNNNNNGG	5 cut(s)	29, 308, 1171, 1652, 2536
BseMI	GCAATG	7 cut(s)	73, 164, 1252, 1719, 2284, 2541, 2670
BseMII	CTCAG	5 cut(s)	731, 1004, 1671, 2216, 2454
BseNI	ACTGG	5 cut(s)	383, 1128, 1218, 1372, 1646
BseRI	GAGGAG	5 cut(s)	271, 416, 1307, 1807, 2437
BseXI	GCAGC	9 cut(s)	25, 215, 672, 1049, 1225, 2491, 2635, 2647, 2659
BseYI	CCCAGC	1 cut(s)	206
Bsh1236I	CGCG	3 cut(s)	774, 823, 2328
BshFI	GGCC	1 cut(s)	1345
BshNI	GGYRCC	1 cut(s)	1277
BshVI	ATCGAT	1 cut(s)	938
BsiHKAI	GWGCWC	1 cut(s)	1969
BsiHKCI	CYCGRG	1 cut(s)	472
BsiSI	CCGG	2 cut(s)	308, 1487
BslFI	GGGAC	5 cut(s)	229, 572, 1134, 1147, 1600
BslI	CCNNNNNNNGG	5 cut(s)	29, 308, 1171, 1652, 2536
BsmAI	GTCTC	5 cut(s)	139, 179, 1217, 1738, 1986
BsmBI	CGTCTC	1 cut(s)	1217
BsmFI	GGGAC	5 cut(s)	229, 572, 1134, 1147, 1600
BsmI	GAATGC	4 cut(s)	298, 373, 718, 1828
BsnI	GGCC	1 cut(s)	1345
BsoBI	CYCGRG	1 cut(s)	472
Bsp119I	TTCGAA	1 cut(s)	1853
Bsp1286I	GDGCHC	1 cut(s)	1969
Bsp68I	TCGCGA	1 cut(s)	2328
BspACI	CCGC	4 cut(s)	299, 774, 980, 1297
BspANI	GGCC	1 cut(s)	1345
BspCNI	CTCAG	5 cut(s)	730, 1005, 1672, 2215, 2455
BspDI	ATCGAT	1 cut(s)	938
BspFNI	CGCG	3 cut(s)	774, 823, 2328
BspHI	TCATGA	2 cut(s)	1314, 2023
BspLI	GGNNCC	1 cut(s)	1279
BspOI	GCTAGC	2 cut(s)	93, 522
BspPI	GGATC	4 cut(s)	155, 552, 1715, 2137
BspQI	GCTCTTC	1 cut(s)	963
BspT104I	TTCGAA	1 cut(s)	1853
BspT107I	GGYRCC	1 cut(s)	1277
BsrBI	CCGCTC	1 cut(s)	1297
BsrDI	GCAATG	7 cut(s)	73, 164, 1252, 1719, 2284, 2541, 2670
BsrI	ACTGG	5 cut(s)	383, 1128, 1218, 1372, 1646
BssNI	GRCGYC	1 cut(s)	1636
Bst2UI	CCWGG	4 cut(s)	905, 1725, 2305, 2531
Bst6I	CTCTTC	7 cut(s)	88, 177, 333, 405, 963, 1320, 2584
BstACI	GRCGYC	1 cut(s)	1636
BstAPI	GCANNNNNTGC	2 cut(s)	1238, 2657
BstBI	TTCGAA	1 cut(s)	1853
BstC8I	GCNNGC	8 cut(s)	91, 520, 776, 1243, 1423, 1872, 1899, 2379
BstDEI	CTNAG	9 cut(s)	105, 717, 801, 889, 1013, 1680, 2202, 2418, 2463
BstEII	GGTNACC	1 cut(s)	910
BstENI	CCTNNNNNAGG	2 cut(s)	27, 2534
BstF5I	GGATG	6 cut(s)	334, 412, 997, 1135, 2212, 2371
BstFNI	CGCG	3 cut(s)	774, 823, 2328
BstHHI	GCGC	2 cut(s)	660, 1471
BstMAI	GTCTC	5 cut(s)	139, 179, 1217, 1738, 1986
BstNI	CCWGG	4 cut(s)	905, 1725, 2305, 2531
BstNSI	RCATGY	4 cut(s)	613, 1037, 1901, 2153
BstPI	GGTNACC	1 cut(s)	910
BstSCI	CCNGG	5 cut(s)	307, 903, 1723, 2303, 2529
BstUI	CGCG	3 cut(s)	774, 823, 2328
BstV1I	GCAGC	9 cut(s)	25, 215, 672, 1049, 1225, 2491, 2635, 2647, 2659
BstX2I	RGATCY	5 cut(s)	544, 885, 1186, 1720, 2129
BstYI	RGATCY	5 cut(s)	544, 885, 1186, 1720, 2129
Bsu15I	ATCGAT	1 cut(s)	938
BsuRI	GGCC	1 cut(s)	1345
BsuTUI	ATCGAT	1 cut(s)	938
BtgZI	GCGATG	1 cut(s)	2309
BtsCI	GGATG	6 cut(s)	334, 412, 997, 1135, 2212, 2371
BtsI	GCAGTG	4 cut(s)	1416, 1819, 1969, 2296
BtsIMutI	CAGTG	8 cut(s)	1010, 1059, 1225, 1346, 1416, 1819, 1969, 2296
BtuMI	TCGCGA	1 cut(s)	2328
Cac8I	GCNNGC	8 cut(s)	91, 520, 776, 1243, 1423, 1872, 1899, 2379
CciI	TCATGA	2 cut(s)	1314, 2023
CfoI	GCGC	2 cut(s)	660, 1471
Cfr13I	GGNCC	2 cut(s)	974, 2431
ClaI	ATCGAT	1 cut(s)	938
CseI	GACGC	1 cut(s)	1625
Csp6I	GTAC	3 cut(s)	1285, 1822, 2089
CviQI	GTAC	3 cut(s)	1285, 1822, 2089
DdeI	CTNAG	9 cut(s)	105, 717, 801, 889, 1013, 1680, 2202, 2418, 2463
DraIII	CACNNNGTG	1 cut(s)	1277
DriI	GACNNNNNGTC	1 cut(s)	2113
EaeI	YGGCCR	1 cut(s)	1343
Eam1104I	CTCTTC	7 cut(s)	88, 177, 333, 405, 963, 1320, 2584
Eam1105I	GACNNNNNGTC	1 cut(s)	2113
EarI	CTCTTC	7 cut(s)	88, 177, 333, 405, 963, 1320, 2584
Eco32I	GATATC	1 cut(s)	2410
Eco47I	GGWCC	2 cut(s)	974, 2431
Eco57I	CTGAAG	3 cut(s)	69, 357, 764
Eco88I	CYCGRG	1 cut(s)	472
Eco91I	GGTNACC	1 cut(s)	910
EcoNI	CCTNNNNNAGG	2 cut(s)	27, 2534
EcoO109I	RGGNCCY	1 cut(s)	974
EcoO65I	GGTNACC	1 cut(s)	910
EcoRI	GAATTC	1 cut(s)	927
EcoRII	CCWGG	4 cut(s)	903, 1723, 2303, 2529
EcoRV	GATATC	1 cut(s)	2410
EcoT22I	ATGCAT	2 cut(s)	636, 1444
Esp3I	CGTCTC	1 cut(s)	1217
FalI	AAGNNNNNCTT	2 cut(s)	416, 448
FaqI	GGGAC	5 cut(s)	229, 572, 1134, 1147, 1600
FauI	CCCGC	1 cut(s)	767
FbaI	TGATCA	1 cut(s)	765
FblI	GTMKAC	3 cut(s)	1332, 1413, 1476
Fnu4HI	GCNGC	9 cut(s)	14, 204, 661, 1038, 1239, 2505, 2649, 2661, 2673
FokI	GGATG	6 cut(s)	341, 419, 1004, 1142, 2219, 2378
Fsp4HI	GCNGC	9 cut(s)	14, 204, 661, 1038, 1239, 2505, 2649, 2661, 2673
FspBI	CTAG	5 cut(s)	90, 123, 189, 519, 1698
GlaI	GCGC	2 cut(s)	659, 1470
GluI	GCNGC	9 cut(s)	14, 204, 661, 1038, 1239, 2505, 2649, 2661, 2673
GsaI	CCCAGC	1 cut(s)	210
GsuI	CTGGAG	2 cut(s)	366, 2552
HaeIII	GGCC	1 cut(s)	1345
HapII	CCGG	2 cut(s)	308, 1487
HgaI	GACGC	1 cut(s)	1625
HhaI	GCGC	2 cut(s)	660, 1471
Hin1I	GRCGYC	1 cut(s)	1636
Hin6I	GCGC	2 cut(s)	658, 1469
HinP1I	GCGC	2 cut(s)	658, 1469
HincII	GTYRAC	4 cut(s)	430, 1378, 1477, 2191
HindII	GTYRAC	4 cut(s)	430, 1378, 1477, 2191
HindIII	AAGCTT	2 cut(s)	1073, 2375
HpaI	GTTAAC	1 cut(s)	430
HpaII	CCGG	2 cut(s)	308, 1487
HphI	GGTGA	4 cut(s)	44, 170, 210, 1417
Hpy99I	CGWCG	1 cut(s)	1641
HpyCH4IV	ACGT	1 cut(s)	1356
HpyF3I	CTNAG	9 cut(s)	105, 717, 801, 889, 1013, 1680, 2202, 2418, 2463
HpySE526I	ACGT	1 cut(s)	1356
Hsp92I	GRCGYC	1 cut(s)	1636
HspAI	GCGC	2 cut(s)	658, 1469
Ksp22I	TGATCA	1 cut(s)	765
KspAI	GTTAAC	1 cut(s)	430
LguI	GCTCTTC	1 cut(s)	963
LmnI	GCTCC	5 cut(s)	1273, 1294, 1794, 2052, 2424
Lsp1109I	GCAGC	9 cut(s)	25, 215, 672, 1049, 1225, 2491, 2635, 2647, 2659
LweI	GCATC	3 cut(s)	860, 902, 982
MaeI	CTAG	5 cut(s)	90, 123, 189, 519, 1698
MaeII	ACGT	1 cut(s)	1356
MaeIII	GTNAC	4 cut(s)	910, 1057, 1135, 1462
MbiI	CCGCTC	1 cut(s)	1297
MflI	RGATCY	5 cut(s)	544, 885, 1186, 1720, 2129
MhlI	GDGCHC	1 cut(s)	1969
MlsI	TGGCCA	1 cut(s)	1345
MluNI	TGGCCA	1 cut(s)	1345
MlyI	GAGTC	8 cut(s)	74, 251, 1547, 1559, 1684, 2102, 2445, 2603
MmeI	TCCRAC	3 cut(s)	31, 2107, 2531
Mox20I	TGGCCA	1 cut(s)	1345
Mph1103I	ATGCAT	2 cut(s)	636, 1444
MscI	TGGCCA	1 cut(s)	1345
MseI	TTAA	8 cut(s)	429, 866, 882, 1260, 1620, 1775, 2442, 2526
MslI	CAYNNNNRTG	7 cut(s)	614, 731, 856, 951, 1902, 2148, 2289
Msp20I	TGGCCA	1 cut(s)	1345
MspA1I	CMGCKG	1 cut(s)	206
MspI	CCGG	2 cut(s)	308, 1487
MspR9I	CCNGG	5 cut(s)	309, 905, 1725, 2305, 2531
Mva1269I	GAATGC	4 cut(s)	298, 373, 718, 1828
MvaI	CCWGG	4 cut(s)	905, 1725, 2305, 2531
MvnI	CGCG	3 cut(s)	774, 823, 2328
NciI	CCSGG	1 cut(s)	309
NheI	GCTAGC	2 cut(s)	89, 518
NlaIV	GGNNCC	1 cut(s)	1279
NmuCI	GTSAC	1 cut(s)	1057
NruI	TCGCGA	1 cut(s)	2328
NsiI	ATGCAT	2 cut(s)	636, 1444
NspI	RCATGY	4 cut(s)	613, 1037, 1901, 2153
NspV	TTCGAA	1 cut(s)	1853
PaeI	GCATGC	1 cut(s)	1901
PagI	TCATGA	2 cut(s)	1314, 2023
PciI	ACATGT	1 cut(s)	2149
PciSI	GCTCTTC	1 cut(s)	963
PcsI	WCGNNNNNNNCGW	1 cut(s)	359
PctI	GAATGC	4 cut(s)	298, 373, 718, 1828
PflFI	GACNNNGTC	1 cut(s)	2435
PflMI	CCANNNNNTGG	2 cut(s)	1171, 1652
PfoI	TCCNGGA	2 cut(s)	1723, 2303
PkrI	GCNGC	9 cut(s)	15, 205, 662, 1039, 1240, 2506, 2650, 2662, 2674
PleI	GAGTC	8 cut(s)	74, 250, 1547, 1559, 1683, 2102, 2444, 2602
PpsI	GAGTC	8 cut(s)	74, 250, 1547, 1559, 1683, 2102, 2444, 2602
PpuMI	RGGWCCY	1 cut(s)	974
PscI	ACATGT	1 cut(s)	2149
PsiI	TTATAA	1 cut(s)	2343
Psp5II	RGGWCCY	1 cut(s)	974
Psp6I	CCWGG	4 cut(s)	903, 1723, 2303, 2529
PspEI	GGTNACC	1 cut(s)	910
PspFI	CCCAGC	1 cut(s)	206
PspGI	CCWGG	4 cut(s)	903, 1723, 2303, 2529
PspN4I	GGNNCC	1 cut(s)	1279
PspPI	GGNCC	2 cut(s)	974, 2431
PspPPI	RGGWCCY	1 cut(s)	974
PsuI	RGATCY	5 cut(s)	544, 885, 1186, 1720, 2129
PsyI	GACNNNGTC	1 cut(s)	2435
PvuII	CAGCTG	1 cut(s)	206
RruI	TCGCGA	1 cut(s)	2328
RsaI	GTAC	3 cut(s)	1286, 1823, 2090
RsaNI	GTAC	3 cut(s)	1285, 1822, 2089
RseI	CAYNNNNRTG	7 cut(s)	614, 731, 856, 951, 1902, 2148, 2289
SalI	GTCGAC	1 cut(s)	1475
SapI	GCTCTTC	1 cut(s)	963
SaqAI	TTAA	8 cut(s)	429, 866, 882, 1260, 1620, 1775, 2442, 2526
SatI	GCNGC	9 cut(s)	14, 204, 661, 1038, 1239, 2505, 2649, 2661, 2673
Sau96I	GGNCC	2 cut(s)	974, 2431
SchI	GAGTC	8 cut(s)	74, 251, 1547, 1559, 1684, 2102, 2445, 2603
ScrFI	CCNGG	5 cut(s)	309, 905, 1725, 2305, 2531
SduI	GDGCHC	1 cut(s)	1969
SfaNI	GCATC	3 cut(s)	860, 902, 982
SfuI	TTCGAA	1 cut(s)	1853
SinI	GGWCC	2 cut(s)	974, 2431
SmiMI	CAYNNNNRTG	7 cut(s)	614, 731, 856, 951, 1902, 2148, 2289
SmlI	CTYRAG	2 cut(s)	433, 2084
SmoI	CTYRAG	2 cut(s)	433, 2084
SpeI	ACTAGT	1 cut(s)	188
SphI	GCATGC	1 cut(s)	1901
SsiI	CCGC	4 cut(s)	299, 774, 980, 1297
SspMI	CTAG	5 cut(s)	90, 123, 189, 519, 1698
StyD4I	CCNGG	5 cut(s)	307, 903, 1723, 2303, 2529
TaiI	ACGT	1 cut(s)	1359
TaqI	TCGA	7 cut(s)	149, 938, 1476, 1853, 2154, 2276, 2412
TaqII	GACCGA	1 cut(s)	2448
TatI	WGTACW	1 cut(s)	1284
Tru1I	TTAA	8 cut(s)	429, 866, 882, 1260, 1620, 1775, 2442, 2526
Tru9I	TTAA	8 cut(s)	429, 866, 882, 1260, 1620, 1775, 2442, 2526
TscAI	CASTG	8 cut(s)	1017, 1066, 1225, 1353, 1423, 1819, 1969, 2296
TseFI	GTSAC	1 cut(s)	1057
TseI	GCWGC	9 cut(s)	13, 203, 660, 1037, 1238, 2504, 2648, 2660, 2672
Tsp45I	GTSAC	1 cut(s)	1057
TspGWI	ACGGA	2 cut(s)	714, 1241
TspRI	CASTG	8 cut(s)	1017, 1066, 1225, 1353, 1423, 1819, 1969, 2296
Tth111I	GACNNNGTC	1 cut(s)	2435
Van91I	CCANNNNNTGG	2 cut(s)	1171, 1652
VpaK11BI	GGWCC	2 cut(s)	974, 2431
XagI	CCTNNNNNAGG	2 cut(s)	27, 2534
XapI	RAATTY	8 cut(s)	214, 899, 927, 1849, 2017, 2078, 2477, 2519
XceI	RCATGY	4 cut(s)	613, 1037, 1901, 2153
XcmI	CCANNNNNNNNNTGG	2 cut(s)	805, 1120
XmiI	GTMKAC	3 cut(s)	1332, 1413, 1476
XspI	CTAG	5 cut(s)	90, 123, 189, 519, 1698
Zsp2I	ATGCAT	2 cut(s)	636, 1444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.