Rorug06G0167100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0004444
Physical Location & Seq
Forward (+)
24385069 .. 24403790
18722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0167100.1

Sequence Viewer

Length: 2286 bp
ATGAAATCGAAAAGTTCGGAACGAAGGTCCAACTATTTCGGCAAACAAGTTTCAGAGCGACACAGAGTCGTAGCCATTTGCCGAAGAACCAAAAGCTCTGGCTTTCCCGGACTTCCGTCACCGTCTATTCTCCCGGTTTTGTCTTCCAGTAATATGAGGATGGACCTTGAGAGTTGCATGGGATTAAATGACCCACGACAGATGCTTCCACCTCCACCTGGATCTTTTGTGGATCGTGACGAACTCATTCAACATGTTGGGGACTTTGCTGTGTCACAGGGTTATGTTGTAACTATCAAGCAGTCTAAGAGGGATAGAGTAGTTATCCTTGGTTGTGACAGAGGAGGTGTTTACCGTAATAGGCAGAAACAGGTTGATGAGTCCTGTAGTGAACAGAACAAAAGGAGAAAAGCAGGATCTCGGCTGACAAATTGTCCTTTTGAAGCTGTGGGGAAAAAGGGTGATGGCTTGTGGGTACTTACTGTAAAAAATGGAACCCACAACCATGAACCCATGAAGGATATTTCTGAACATCCCTCTGCTCGTCGTTTCAACGAGAGAGAAGTTTTGATGATTAAAGAGATGACAGAATCTGGTTTAAAACCTCGCCAAATTCTAAAGAGATTAAGACAAAGCAATCCAGATCTTTTATCAACTCCGAAGCATGTTTATAATGTTAAAGCAAAGCTTCGCCAAGGAAACACTGGAGTTAGAAACTTCAAGTCTTTGAGTCCACAGAAATCATTGGGAAGGAACGATTACTCTGTGGTCATCGAGCCATCTTGGAGGCAGCGCAACCCCCCGAGAGTTCCCAATCTCATTGGAGGTAGATTTGTTGATTCACAGTCATTTGCCTCCATTGATGTTTTAAACCCTGCAACACAGCAAGTTGCTTCTCAAGTACCTTTAACAACAAATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACGTGCCTTTCCATTGTGGCGATGTACACCTATTACTACTCGTCAGCGTATTATGTTCAAGTTCCAAGAGCTTATACGCAGAGACATTGATAAGATTGCTATGACCATTACAAGTGAACATGGCAAAGCATTGAAGGATGCATATGATGATGTCTCACGTGGGCTAGAGGTGGTCGAACATGCTTGTGGACTTGCAACTCTGCAGATGGGAGATTTTATTTCCAATGTATCAAATGGAATTGATAGCTACAGCATTAGGGAGCCACTTGGTGTTTGTGCTGGGATTTGCCCTTTTGATTTTCCAGCCATGATTCCCTTATGGATGTTCACTACTGCAGTGACATGTGGTAATTCATTTATTCTAAAGCCATCAGAGATGGATCCAGGTGCATCTGTGATGCTTGCAGAGTTGGCAATGGAGGCTGGCTTGCCAAGTGGCGTGTTAAATATTGTTCATGGCACTAATGAAACTTTTGATGCTATTTGTGATGATGATGACATTAAAGCTATCTCATTTGTTGGAACAAAAGCAGCAGGTGCTTACATTTATTCCCGAGCATCGGCTAAGGGGAAACGTATTCAGTCCAATGTTGGAGCGAAAAATCATGCTATTGTCATGCCTGATGCAAGCATCGACACTACTCTGAATGCTCTAGTTGCTGCTGGCTTTGGTGCTGCAGGACAAAGCTGCACAGCACTTACAACAGTTGTTTTCATTGGAGGCATACATCTATGGGAAGACAAACTTGTAGAGCGTGCCAAAGCACTCAAGGTTGATGCCGGATCACAAGCAGATGTAGACATTGGTCCAGTGATTAGCAAGCAGGTAAAGGAACAGATATGCAGATTGATTCAAACAGGTGTTGAAAGTGGTGCAAAACTGGTGCTTGATGGTAGAAATATCTTGGTTCCTGGATTTGAGCATGGCAACTTCATTGGTCCCACCATCTTATCCGATGTCACAGCAGAGATGGAGTGTTATAAGGAAGAAATCTTTGGCCCAGTTCTTCTCTGTATGGAGGCTGACAACATTGAAGATGCCATAAACATCGTCAACAAAAATAAATATGGCAATGGAGCTTCTATCTTTACAACGTCTGGTGTGGCTGCAAGAAAATTCCAGACTGAGATTGAAGTGGGCCAGGTTGGCATAAATATTCCCATCTCAGTTCCATTGCCCTATTCCTTGTTTACGAGCTCCCGGCCATCTTTTGCGGGTGATCTTAATTTTGATGGCAAAGCAGGGATTCAGTTTTACACCCAGATGAAGACTGTGACTCAACAATGGAGGGATTTACCTGACAGTGATGGACAAGCCTTGCTAATGTCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SNARE_assoc

Protein Analysis

761

Amino Acids

83.42

Weight (kDa)

8.78

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 278 - 742 1.9e-131 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 672, 1932
AarI CACCTGC 1 cut(s) 1475
Acc36I ACCTGC 2 cut(s) 1475, 1765
AccI GTMKAC 1 cut(s) 1749
AciI CCGC 1 cut(s) 2165
AclWI GGATC 6 cut(s) 229, 240, 424, 1325, 1338, 1741
AcoI YGGCCR 1 cut(s) 2153
AcsI RAATTY 2 cut(s) 612, 2066
AcvI CACGTG 1 cut(s) 1109
AdeI CACNNNGTG 1 cut(s) 1220
AfaI GTAC 3 cut(s) 477, 903, 976
AfiI CCNNNNNNNGG 2 cut(s) 218, 1510
AflIII ACRYGT 2 cut(s) 253, 1292
AhdI GACNNNNNGTC 2 cut(s) 65, 432
AjnI CCWGG 4 cut(s) 217, 1333, 1861, 2091
AjuI GAANNNNNNNTTGG 2 cut(s) 1929, 1961
Alw21I GWGCWC 1 cut(s) 2150
Alw26I GTCTC 2 cut(s) 1026, 1108
AlwI GGATC 6 cut(s) 229, 240, 424, 1325, 1338, 1741
AlwNI CAGNNNCTG 1 cut(s) 593
Ama87I CYCGRG 2 cut(s) 802, 1503
AoxI GGCC 3 cut(s) 1948, 2089, 2153
ApeKI GCWGC 7 cut(s) 790, 932, 1481, 1610, 1625, 1638, 2057
ApoI RAATTY 2 cut(s) 612, 2066
Asp700I GAANNNNTTC 1 cut(s) 246
AspLEI GCGC 1 cut(s) 795
AspS9I GGNCC 6 cut(s) 27, 163, 1757, 1889, 1949, 2089
AsuC2I CCSGG 3 cut(s) 108, 134, 2152
AsuHPI GGTGA 3 cut(s) 111, 473, 2180
AvaI CYCGRG 2 cut(s) 802, 1503
AvaII GGWCC 4 cut(s) 27, 163, 1757, 1889
BamHI GGATCC 1 cut(s) 1330
BanII GRGCYC 1 cut(s) 2150
BbrPI CACGTG 1 cut(s) 1109
BbsI GAAGAC 3 cut(s) 135, 1695, 2225
Bbv12I GWGCWC 1 cut(s) 2150
BbvI GCAGC 7 cut(s) 802, 919, 1493, 1597, 1612, 1625, 2044
BciT130I CCWGG 4 cut(s) 219, 1335, 1863, 2093
BcnI CCSGG 3 cut(s) 108, 134, 2152
BcoDI GTCTC 2 cut(s) 1026, 1108
BfaI CTAG 2 cut(s) 1115, 1604
BfmI CTRYAG 6 cut(s) 385, 933, 1151, 1198, 1284, 1626
BfuAI ACCTGC 2 cut(s) 1475, 1765
BglI GCCNNNNNGGC 1 cut(s) 2097
BglII AGATCT 1 cut(s) 643
BisI GCNGC 7 cut(s) 791, 933, 1482, 1611, 1626, 1639, 2058
BlsI GCNGC 7 cut(s) 792, 934, 1483, 1612, 1627, 1640, 2059
Bme1390I CCNGG 7 cut(s) 108, 134, 219, 1335, 1863, 2093, 2152
Bme18I GGWCC 4 cut(s) 27, 163, 1757, 1889
BmeRI GACNNNNNGTC 2 cut(s) 65, 432
BmeT110I CYCGRG 2 cut(s) 802, 1503
BmgT120I GGNCC 6 cut(s) 27, 163, 1757, 1889, 1949, 2089
BmiI GGNNCC 5 cut(s) 496, 1212, 1332, 1860, 1891
BmrFI CCNGG 7 cut(s) 108, 134, 219, 1335, 1863, 2093, 2152
BmrI ACTGGG 1 cut(s) 1946
BmuI ACTGGG 1 cut(s) 1946
BoxI GACNNNNGTC 2 cut(s) 115, 1755
BpiI GAAGAC 3 cut(s) 135, 1695, 2225
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 1515
BpuEI CTTGAG 3 cut(s) 188, 882, 1703
BpuMI CCSGG 3 cut(s) 108, 134, 2152
BsaAI YACGTR 1 cut(s) 1109
BsaJI CCNNGG 2 cut(s) 328, 694
Bsc4I CCNNNNNNNGG 2 cut(s) 218, 1510
Bse1I ACTGG 5 cut(s) 147, 709, 1760, 1836, 1952
Bse3DI GCAATG 3 cut(s) 1371, 2029, 2123
BseBI CCWGG 4 cut(s) 219, 1335, 1863, 2093
BseDI CCNNGG 2 cut(s) 328, 694
BseGI GGATG 4 cut(s) 165, 532, 1093, 1278
BseLI CCNNNNNNNGG 2 cut(s) 218, 1510
BseMI GCAATG 3 cut(s) 1371, 2029, 2123
BseMII CTCAG 2 cut(s) 2067, 2130
BseNI ACTGG 5 cut(s) 147, 709, 1760, 1836, 1952
BseRI GAGGAG 2 cut(s) 357, 935
BseXI GCAGC 7 cut(s) 802, 919, 1493, 1597, 1612, 1625, 2044
BseYI CCCAGC 1 cut(s) 1229
BsgI GTGCAG 1 cut(s) 1624
BshFI GGCC 3 cut(s) 1950, 2091, 2155
BsiHKAI GWGCWC 1 cut(s) 2150
BsiHKCI CYCGRG 2 cut(s) 802, 1503
BsiSI CCGG 4 cut(s) 108, 134, 1731, 2152
BslFI GGGAC 2 cut(s) 275, 1875
BslI CCNNNNNNNGG 2 cut(s) 218, 1510
BsmAI GTCTC 2 cut(s) 1026, 1108
BsmFI GGGAC 2 cut(s) 275, 1875
BsmI GAATGC 1 cut(s) 1603
BsnI GGCC 3 cut(s) 1950, 2091, 2155
BsoBI CYCGRG 2 cut(s) 802, 1503
Bsp1286I GDGCHC 1 cut(s) 2150
Bsp1407I TGTACA 1 cut(s) 974
Bsp143I GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
BspACI CCGC 1 cut(s) 2165
BspANI GGCC 3 cut(s) 1950, 2091, 2155
BspCNI CTCAG 2 cut(s) 2068, 2129
BspLI GGNNCC 5 cut(s) 496, 1212, 1332, 1860, 1891
BspMAI CTGCAG 4 cut(s) 937, 1155, 1288, 1630
BspMI ACCTGC 2 cut(s) 1475, 1765
BspPI GGATC 6 cut(s) 229, 240, 424, 1325, 1338, 1741
BsrDI GCAATG 3 cut(s) 1371, 2029, 2123
BsrGI TGTACA 1 cut(s) 974
BsrI ACTGG 5 cut(s) 147, 709, 1760, 1836, 1952
BssECI CCNNGG 2 cut(s) 328, 694
BssMI GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
BssT1I CCWWGG 2 cut(s) 328, 694
Bst2UI CCWGG 4 cut(s) 219, 1335, 1863, 2093
Bst4CI ACNGT 7 cut(s) 123, 356, 484, 846, 1657, 2224, 2255
BstAPI GCANNNNNTGC 2 cut(s) 953, 1487
BstAUI TGTACA 1 cut(s) 974
BstBAI YACGTR 1 cut(s) 1109
BstC8I GCNNGC 7 cut(s) 1353, 1375, 1379, 1579, 1615, 1707, 1772
BstDEI CTNAG 4 cut(s) 306, 1515, 2076, 2116
BstF5I GGATG 4 cut(s) 165, 532, 1093, 1278
BstHHI GCGC 1 cut(s) 795
BstKTI GATC 7 cut(s) 224, 235, 419, 646, 1333, 1736, 2173
BstMAI GTCTC 2 cut(s) 1026, 1108
BstMBI GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
BstMWI GCNNNNNNNGC 6 cut(s) 953, 1361, 1370, 1487, 1607, 2097
BstNI CCWGG 4 cut(s) 219, 1335, 1863, 2093
BstNSI RCATGY 4 cut(s) 257, 668, 1133, 1296
BstPAI GACNNNNGTC 2 cut(s) 115, 1755
BstSCI CCNGG 7 cut(s) 106, 132, 217, 1333, 1861, 2091, 2150
BstSFI CTRYAG 6 cut(s) 385, 933, 1151, 1198, 1284, 1626
BstV1I GCAGC 7 cut(s) 802, 919, 1493, 1597, 1612, 1625, 2044
BstV2I GAAGAC 3 cut(s) 135, 1695, 2225
BstX2I RGATCY 4 cut(s) 221, 416, 643, 1330
BstYI RGATCY 4 cut(s) 221, 416, 643, 1330
BsuRI GGCC 3 cut(s) 1950, 2091, 2155
BtgZI GCGATG 1 cut(s) 985
BtsCI GGATG 4 cut(s) 165, 532, 1093, 1278
BtsI GCAGTG 1 cut(s) 1293
BtsIMutI CAGTG 4 cut(s) 702, 1293, 1767, 2260
BveI ACCTGC 2 cut(s) 1475, 1765
Cac8I GCNNGC 7 cut(s) 1353, 1375, 1379, 1579, 1615, 1707, 1772
CaiI CAGNNNCTG 1 cut(s) 593
CfoI GCGC 1 cut(s) 795
Cfr13I GGNCC 6 cut(s) 27, 163, 1757, 1889, 1949, 2089
Csp6I GTAC 3 cut(s) 476, 902, 975
CviQI GTAC 3 cut(s) 476, 902, 975
DdeI CTNAG 4 cut(s) 306, 1515, 2076, 2116
DpnI GATC 7 cut(s) 223, 234, 418, 645, 1332, 1735, 2172
DpnII GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
DraI TTTAAA 2 cut(s) 600, 870
DraIII CACNNNGTG 1 cut(s) 1220
DriI GACNNNNNGTC 2 cut(s) 65, 432
EaeI YGGCCR 1 cut(s) 2153
Eam1105I GACNNNNNGTC 2 cut(s) 65, 432
Ecl136II GAGCTC 1 cut(s) 2148
Eco130I CCWWGG 2 cut(s) 328, 694
Eco24I GRGCYC 1 cut(s) 2150
Eco47I GGWCC 4 cut(s) 27, 163, 1757, 1889
Eco53kI GAGCTC 1 cut(s) 2148
Eco72I CACGTG 1 cut(s) 1109
Eco88I CYCGRG 2 cut(s) 802, 1503
EcoICRI GAGCTC 1 cut(s) 2148
EcoRII CCWGG 4 cut(s) 217, 1333, 1861, 2091
EcoT14I CCWWGG 2 cut(s) 328, 694
EcoT22I ATGCAT 1 cut(s) 1093
EcoT38I GRGCYC 1 cut(s) 2150
ErhI CCWWGG 2 cut(s) 328, 694
FalI AAGNNNNNCTT 4 cut(s) 672, 704, 1680, 1712
FaqI GGGAC 2 cut(s) 275, 1875
FauI CCCGC 1 cut(s) 2158
FauNDI CATATG 1 cut(s) 1093
FblI GTMKAC 1 cut(s) 1749
Fnu4HI GCNGC 7 cut(s) 791, 933, 1482, 1611, 1626, 1639, 2058
FokI GGATG 4 cut(s) 172, 519, 1100, 1285
FriOI GRGCYC 1 cut(s) 2150
Fsp4HI GCNGC 7 cut(s) 791, 933, 1482, 1611, 1626, 1639, 2058
FspBI CTAG 2 cut(s) 1115, 1604
GlaI GCGC 1 cut(s) 794
GluI GCNGC 7 cut(s) 791, 933, 1482, 1611, 1626, 1639, 2058
GsaI CCCAGC 1 cut(s) 1233
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 3 cut(s) 1950, 2091, 2155
HapII CCGG 4 cut(s) 108, 134, 1731, 2152
HhaI GCGC 1 cut(s) 795
Hin6I GCGC 1 cut(s) 793
HinP1I GCGC 1 cut(s) 793
HincII GTYRAC 2 cut(s) 2005, 2280
HindII GTYRAC 2 cut(s) 2005, 2280
HindIII AAGCTT 1 cut(s) 686
HinfI GANTC 9 cut(s) 66, 380, 590, 730, 839, 1261, 1801, 2197, 2227
HpaII CCGG 4 cut(s) 108, 134, 1731, 2152
HphI GGTGA 3 cut(s) 111, 473, 2180
Hpy188I TCNGA 7 cut(s) 19, 55, 529, 660, 1324, 1596, 1906
Hpy188III TCNNGA 4 cut(s) 236, 641, 1503, 2071
Hpy99I CGWCG 1 cut(s) 549
HpyAV CCTTC 4 cut(s) 18, 511, 744, 1078
HpyCH4III ACNGT 7 cut(s) 123, 356, 484, 846, 1657, 2224, 2255
HpyCH4IV ACGT 4 cut(s) 952, 1108, 1525, 2045
HpyF10VI GCNNNNNNNGC 6 cut(s) 953, 1361, 1370, 1487, 1607, 2097
HpyF3I CTNAG 4 cut(s) 306, 1515, 2076, 2116
HpySE526I ACGT 4 cut(s) 952, 1108, 1525, 2045
HspAI GCGC 1 cut(s) 793
Kzo9I GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
LmnI GCTCC 4 cut(s) 1210, 1544, 2027, 2153
Lsp1109I GCAGC 7 cut(s) 802, 919, 1493, 1597, 1612, 1625, 2044
MaeI CTAG 2 cut(s) 1115, 1604
MaeII ACGT 4 cut(s) 952, 1108, 1525, 2045
MaeIII GTNAC 8 cut(s) 117, 236, 273, 289, 335, 1288, 1909, 2224
MalI GATC 7 cut(s) 223, 234, 418, 645, 1332, 1735, 2172
MboI GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
MboII GAAGA 7 cut(s) 96, 135, 1700, 1949, 1949, 1997, 2230
MflI RGATCY 4 cut(s) 221, 416, 643, 1330
MhlI GDGCHC 1 cut(s) 2150
MluCI AATT 6 cut(s) 430, 612, 1188, 1300, 2066, 2176
MlyI GAGTC 4 cut(s) 75, 389, 739, 2221
MmeI TCCRAC 3 cut(s) 54, 1450, 1522
Mph1103I ATGCAT 1 cut(s) 1093
MroXI GAANNNNTTC 1 cut(s) 246
MslI CAYNNNNRTG 3 cut(s) 504, 1134, 2213
MspI CCGG 4 cut(s) 108, 134, 1731, 2152
MspR9I CCNGG 7 cut(s) 108, 134, 219, 1335, 1863, 2093, 2152
Mva1269I GAATGC 1 cut(s) 1603
MvaI CCWGG 4 cut(s) 219, 1335, 1863, 2093
MwoI GCNNNNNNNGC 6 cut(s) 953, 1361, 1370, 1487, 1607, 2097
NciI CCSGG 3 cut(s) 108, 134, 2152
NdeI CATATG 1 cut(s) 1093
NdeII GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
NlaIV GGNNCC 5 cut(s) 496, 1212, 1332, 1860, 1891
NmeAIII GCCGAG 1 cut(s) 400
NmuCI GTSAC 7 cut(s) 117, 236, 273, 335, 1288, 1909, 2224
NsiI ATGCAT 1 cut(s) 1093
NspI RCATGY 4 cut(s) 257, 668, 1133, 1296
PaqCI CACCTGC 1 cut(s) 1475
PciI ACATGT 2 cut(s) 253, 1292
PctI GAATGC 1 cut(s) 1603
PdmI GAANNNNTTC 1 cut(s) 246
PfeI GAWTC 5 cut(s) 590, 839, 1261, 1801, 2197
PfoI TCCNGGA 2 cut(s) 106, 1861
PkrI GCNGC 7 cut(s) 792, 934, 1483, 1612, 1627, 1640, 2059
PleI GAGTC 4 cut(s) 74, 388, 738, 2221
PmaCI CACGTG 1 cut(s) 1109
PmlI CACGTG 1 cut(s) 1109
PpsI GAGTC 4 cut(s) 74, 388, 738, 2221
Ppu21I YACGTR 1 cut(s) 1109
PscI ACATGT 2 cut(s) 253, 1292
PshAI GACNNNNGTC 2 cut(s) 115, 1755
PsiI TTATAA 2 cut(s) 672, 1932
Psp124BI GAGCTC 1 cut(s) 2150
Psp6I CCWGG 4 cut(s) 217, 1333, 1861, 2091
PspCI CACGTG 1 cut(s) 1109
PspFI CCCAGC 1 cut(s) 1229
PspGI CCWGG 4 cut(s) 217, 1333, 1861, 2091
PspN4I GGNNCC 5 cut(s) 496, 1212, 1332, 1860, 1891
PspPI GGNCC 6 cut(s) 27, 163, 1757, 1889, 1949, 2089
PstI CTGCAG 4 cut(s) 937, 1155, 1288, 1630
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 4 cut(s) 221, 416, 643, 1330
RsaI GTAC 3 cut(s) 477, 903, 976
RsaNI GTAC 3 cut(s) 476, 902, 975
RseI CAYNNNNRTG 3 cut(s) 504, 1134, 2213
SacI GAGCTC 1 cut(s) 2150
SatI GCNGC 7 cut(s) 791, 933, 1482, 1611, 1626, 1639, 2058
Sau3AI GATC 7 cut(s) 221, 232, 416, 643, 1330, 1733, 2170
Sau96I GGNCC 6 cut(s) 27, 163, 1757, 1889, 1949, 2089
SchI GAGTC 4 cut(s) 75, 389, 739, 2221
ScrFI CCNGG 7 cut(s) 108, 134, 219, 1335, 1863, 2093, 2152
SduI GDGCHC 1 cut(s) 2150
SfcI CTRYAG 6 cut(s) 385, 933, 1151, 1198, 1284, 1626
SinI GGWCC 4 cut(s) 27, 163, 1757, 1889
SmiMI CAYNNNNRTG 3 cut(s) 504, 1134, 2213
SmlI CTYRAG 3 cut(s) 167, 897, 1718
SmoI CTYRAG 3 cut(s) 167, 897, 1718
Sse9I AATT 6 cut(s) 430, 612, 1188, 1300, 2066, 2176
SsiI CCGC 1 cut(s) 2165
SspI AATATT 2 cut(s) 1399, 2107
SspMI CTAG 2 cut(s) 1115, 1604
SstI GAGCTC 1 cut(s) 2150
StyD4I CCNGG 7 cut(s) 106, 132, 217, 1333, 1861, 2091, 2150
StyI CCWWGG 2 cut(s) 328, 694
TaaI ACNGT 7 cut(s) 123, 356, 484, 846, 1657, 2224, 2255
TaiI ACGT 4 cut(s) 955, 1111, 1528, 2048
TaqI TCGA 4 cut(s) 8, 774, 1125, 1584
TasI AATT 6 cut(s) 430, 612, 1188, 1300, 2066, 2176
TatI WGTACW 1 cut(s) 974
TfiI GAWTC 5 cut(s) 590, 839, 1261, 1801, 2197
TscAI CASTG 4 cut(s) 709, 1293, 1767, 2260
TseFI GTSAC 7 cut(s) 117, 236, 273, 335, 1288, 1909, 2224
TseI GCWGC 7 cut(s) 790, 932, 1481, 1610, 1625, 1638, 2057
Tsp45I GTSAC 7 cut(s) 117, 236, 273, 335, 1288, 1909, 2224
TspDTI ATGAA 9 cut(s) 17, 522, 530, 1293, 1394, 1431, 1654, 1873, 2231
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 4 cut(s) 709, 1293, 1767, 2260
VpaK11BI GGWCC 4 cut(s) 27, 163, 1757, 1889
XapI RAATTY 2 cut(s) 612, 2066
XceI RCATGY 4 cut(s) 257, 668, 1133, 1296
XcmI CCANNNNNNNNNTGG 1 cut(s) 701
XmiI GTMKAC 1 cut(s) 1749
XmnI GAANNNNTTC 1 cut(s) 246
XspI CTAG 2 cut(s) 1115, 1604
Zsp2I ATGCAT 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.