Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004679

Physical Location & Seq

Genomic Coordinates Forward (+)

28011701 .. 28032001

Gene Structure 20301 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0177600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2862 bp

ATGGAGTCAACTCTGAACGCGAGCACATCGACCACATTGGCTCTGCTCACCGTTACGAAAGCCCTGAACCGCCGACTTTGCAAGATCTTTCCGAGTCATCAACCCCTCGCGAGTCGATTGATAGCTCGCAGGCTCACTTGCAACTACGGCGACTTCCATAGGCAGAGGCCTTTCTCTTCATCGACTCTGAGAAGGAGCCTCTGCGTGGTTGATCCTCCGACACGGCGTCGTTTAGAGTGCGTCGCGAGCAACCATGCGTCATTTGCTTCCGGCGGTGGAAATGGTGGCTTCGGCGGCGAGAGTGGCGGCAGCGGCGGCGATGGTGGAGGTAGTTCGGACGGTGGCGATGCCAAGTCCAAGGTCGTTGCTTCTGGGGGCGATGACGTCTCGGCCGTCTCGACTGATGTCATACTGCTCGATGTTGGAGGAATGACATGCGGGGGATGCGCAGCAAGTGTGAAGCGAATTCTAGAAAGCCAACCACAGGTGTCATCTGCTAGTGTAAATCTTACGACTGAGGTGGCAATTGTCTGGCCTGTGTCTGAAGCCAAGCTCTCACCAAACTGGCAAAAGCAGTTGGGGGAGACACTTGCAAACCATTTGACTAATTGTGGTTTCAATTCTAACATTCGTGATTCAGGAAGAAACAGTTTTCTTAAGATTTTTGAAAGGAAAATTGAAGATAAGCGCAAACGCCTGAAAGAAAGTGGTCATGAGCTTGCTTTCTCTTGGGCTCTATGTGCTGTCTGCCTAGTTGGTCATCTTTCTCATTTCCTTGGAGCTAAGGCTTCATGGATCCATGCTTTTCATTCAACAGGATTCCATCTGTCTCTATCTTTATTCACATTGCTTGGTCCTGGGCGTCGGCTTATCCTTGATGGTTTGAAGAGTCTTGTTAAAGGGGCTCCAAACATGAATACTTTAGTTGGTCTTGGGGCTTTATCTTCATTTACAGTCAGTTCATTAGCTGCCTTTATACCAAAGCTGGGTTGGAAGACTTTCTTTGAGGAACCAATAATGTTGATAGCATTCGTGCTGCTGGGGAGGAATCTTGAACAAAGAGCTAAAATCAAAGCAAGCAGTGATATGACTGAGCTTCTTAGTATTTTACCAGCAAAAGCTCGTCTTCTGGTCAATGATGGTGTTAAAGAGTCGGAAACAATAGTTGAAGTTCCATCTAACAGTCTCTGTGTAGGAGATCAAGTTGTTGTATTACCTGGAGACCGTGTTCCAGTAGATGGAATTGTTATAGCTGGTAGAAGTACCATTGATGAGTCAAGTTTTACTGGAGAGCCATTGCCTGTGACCAAACTACCTGGGAGTCAAGTTGCAGCTGGAAGTATAAATCTCAATGGAAGTCTTACGATTGTAGTGCAGAGACCAGGTGGTGAGACTGCTATGGCAGACATTGTTCGTCTAGTAGAAGAAGCACAGAGTCGGGAGGCTCCAGTCCAGCGTCTGGCTGACAAGGTATCTGGGCATTTTACGTATGGAGTAATGGGACTCTCTGCGGCTACATTTTTGTTCTGGAGTTTGATTGGTGGACGTATTTTACCTGCTGTTCTTCAAGGAGGAAATTCAGTTTCTTTAGCATTGCAACTCTCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCCCTTGGGTTGGCTACACCTACAGCTGTGCTGGTAGGAACTTCATTAGGAGCCACAAGAGGACTGCTTTTGCGTGGTGGAAATGTTTTAGAGAAGTTTTCGATGGTGAACACTGTAGTATTTGATAAAACAGGGACTCTGACAATGGGCAAGCCAGTTGTGACAAAAATTTTGACTCCCGAACATGCAGAAGTTACTGGCGTAGAAGAAAAGTCGAACCATACTTGGTCAGACCTTGAGGTTCTCAAGTTTGCTGCTGGAGTAGAATCAAATACAATTCATCCTGTTGGGAAAGCTATTGTGGAAGCCGCTCGGGCTGTTAATTGTCAGAATATACAGGTTGCAGATGGAACATTTATAGAAGAACCTGGCTCTGGTGCTGTAGCTATTATTGAAGATAAAAAGGTTTCTGTTGGGACTTTGGACTGGGTCCAACGGCATGGAGTCAATAAGAATCCATTTGAAGAAGTTGAGGCCCATAAGAGTCAATCTGTTGTGTATGTTGCCATTGATAGTACTCTTGCTGGTCTTATTTATTTTGAGGATCAGATAAGAGATGATGCCGGACAAGTTGTTAAATCCTTATCTAGCCAAGGGATTTCTGTATACATGCTATCTGGGGACAAAACAGAAAACGCAGAGTACGTTGCATCTGTAGTTGGTATTCCAAAAGAGAAGGTAATATCTGGTGTTAAACCAAGGGAAAAGAAGAAGTTCATAACTGAACTTCAAAATGATCAAAATATTGTTGCCATGGTTGGTGATGGAATCAATGATGCTGCAGCCTTAGCTTCATCCCATGTTGGGATTGCCATGGGTGGTGGTGTTGGAGCTGCTAGTGAGGCCTCCTCTATTGTTCTATTGGGCAATAGACTTTCACAGTTGGTTGATGCTTTGGAGTTGAGTAGGCTAACCATGGAGACTGTGAAGCAAAATCTTTGGTGGGCTTTTGCATACAACATTGTTGGGCTTCCAATTGCTGCTGGAGTATTACTGCCTGTAACTGGGACCATGCTGACTCCGTCAATTGCTGGAGCTCTCATGGGCTTGAGTTCTGTAGGGGTTATGGCAAATTCGTTGTTCCTAAGATACAAGTTTTCATTAAAGCAGGAACGAAGATATAAAAGATCAGCAGGCACTAAAACTAACAGAGTTTCCAATATTATCATGGACAAGAGTGCGGGGGAAAAGCATCCCAATTCTGATGAAAGATGGAAAGGAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PfkB

Protein Analysis

953

Amino Acids

100.83

Weight (kDa)

8.67

Isoelectric Point (pI)

37.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMA	PF00403	139 - 183	7.1e-09	Heavy-metal-associated domain
E1-E2_ATPase	PF00122	372 - 475	1.6e-25	P-type ATPase actuator domain
Hydrolase	PF00702	582 - 810	3.5e-29	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28706 AT4G28706 AT4G28706 AT4G28706 AT5G43910 AT5G43910 AT5G43910 AT5G43910 AT5G43910
fragaria_vesca	FvH4_2g20180 FvH4_2g20180 FvH4_2g20180 FvH4_2g20180
malus_domestica	MD05G1185300.v1.1 MD10G1173500.v1.1
prunus_persica	Prupe.8G212100_v2.0.a1 Prupe.8G212100_v2.0.a1 Prupe.8G212100_v2.0.a1
pyrus_communis	pycom05g17010 pycom10g14960
rosa_chinensis	RchiOBHm_Chr6g0285941
rosa_laevigata	RLG00000012595
rosa_multiflora	Rmu_sc0004808.1_g000008
rosa_roxburghii	Rroxscaffold_7G00182580
rosa_rugosa	Rorug06G0177600 Rorug06G0177600
rosa_samantha	Rh6AG289700 Rh6BG291600 Rh6CG292500 Rh6DG284600
rosa_wichuraiana	Rw6G024960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	387
Acc16I	TGCGCA	1 cut(s)	448
Acc36I	ACCTGC	1 cut(s)	1564
AccB7I	CCANNNNNTGG	2 cut(s)	1238, 1459
AccBSI	CCGCTC	1 cut(s)	1946
AccI	GTMKAC	1 cut(s)	2241
AccII	CGCG	3 cut(s)	20, 110, 245
AclWI	GGATC	4 cut(s)	206, 790, 803, 2187
AcoI	YGGCCR	1 cut(s)	390
AcsI	RAATTY	4 cut(s)	465, 1576, 1803, 2707
AcuI	CTGAAG	1 cut(s)	564
AcyI	GRCGYC	3 cut(s)	226, 384, 862
AfaI	GTAC	3 cut(s)	1264, 2152, 2279
AfiI	CCNNNNNNNGG	9 cut(s)	205, 484, 986, 1238, 1459, 1645, 2009, 2439, 2639
AflII	CTTAAG	1 cut(s)	656
AhdI	GACNNNNNGTC	1 cut(s)	225
AjnI	CCWGG	5 cut(s)	856, 1216, 1315, 1381, 2002
AloI	GAACNNNNNNTCC	2 cut(s)	1212, 1244
Alw21I	GWGCWC	2 cut(s)	26, 2674
Alw26I	GTCTC	9 cut(s)	391, 400, 578, 834, 1190, 1215, 1372, 1385, 2549
AlwI	GGATC	4 cut(s)	206, 790, 803, 2187
AlwNI	CAGNNNCTG	2 cut(s)	1188, 1459
Ama87I	CYCGRG	1 cut(s)	1947
AoxI	GGCC	5 cut(s)	167, 390, 533, 2109, 2478
ApoI	RAATTY	4 cut(s)	465, 1576, 1803, 2707
ArsI	GACNNNNNNTTYG	2 cut(s)	1789, 1821
Asp700I	GAANNNNTTC	2 cut(s)	998, 2348
AspLEI	GCGC	2 cut(s)	449, 690
AspS9I	GGNCC	4 cut(s)	854, 2065, 2110, 2643
AsuHPI	GGTGA	5 cut(s)	40, 549, 1400, 1753, 2408
AvaI	CYCGRG	1 cut(s)	1947
AvaII	GGWCC	3 cut(s)	854, 2065, 2643
BaeGI	GKGCMC	1 cut(s)	1639
BamHI	GGATCC	1 cut(s)	795
BanII	GRGCYC	3 cut(s)	736, 907, 2674
BbsI	GAAGAC	2 cut(s)	1001, 1118
Bbv12I	GWGCWC	2 cut(s)	26, 2674
BceAI	ACGGC	4 cut(s)	163, 239, 377, 2087
BcgI	CGANNNNNNTGC	2 cut(s)	1354, 1388
BciT130I	CCWGG	5 cut(s)	858, 1218, 1317, 1383, 2004
BclI	TGATCA	1 cut(s)	2371
BcoDI	GTCTC	9 cut(s)	391, 400, 578, 834, 1190, 1215, 1372, 1385, 2549
BfaI	CTAG	6 cut(s)	470, 498, 752, 1418, 2223, 2472
BfmI	CTRYAG	6 cut(s)	1656, 1749, 2016, 2289, 2415, 2691
BfrI	CTTAAG	1 cut(s)	656
BfuAI	ACCTGC	1 cut(s)	1564
BglI	GCCNNNNNGGC	1 cut(s)	1949
BglII	AGATCT	1 cut(s)	84
BmcAI	AGTACT	1 cut(s)	2152
Bme1390I	CCNGG	5 cut(s)	858, 1218, 1317, 1383, 2004
Bme18I	GGWCC	3 cut(s)	854, 2065, 2643
BmeRI	GACNNNNNGTC	1 cut(s)	225
BmeT110I	CYCGRG	1 cut(s)	1947
BmgT120I	GGNCC	4 cut(s)	854, 2065, 2110, 2643
BmiI	GGNNCC	8 cut(s)	197, 797, 906, 1011, 1446, 1687, 2066, 2644
BmrFI	CCNGG	5 cut(s)	858, 1218, 1317, 1383, 2004
BmrI	ACTGGG	2 cut(s)	2071, 2649
BmsI	GCATC	7 cut(s)	337, 434, 2185, 2294, 2401, 2515, 2836
BmuI	ACTGGG	2 cut(s)	2071, 2649
BoxI	GACNNNNGTC	1 cut(s)	404
BpiI	GAAGAC	2 cut(s)	1001, 1118
BplI	GAGNNNNNCTC	2 cut(s)	2468, 2500
BpmI	CTGGAG	7 cut(s)	1239, 1308, 1431, 1549, 1914, 2640, 2688
Bpu10I	CCTNAGC	2 cut(s)	783, 2422
BpuEI	CTTGAG	3 cut(s)	1865, 1892, 2704
BsaAI	YACGTR	1 cut(s)	1488
BsaHI	GRCGYC	3 cut(s)	226, 384, 862
BsaI	GGTCTC	2 cut(s)	1215, 1372
BsaXI	ACNNNNNCTCC	4 cut(s)	1188, 1212, 1218, 1242
Bsc4I	CCNNNNNNNGG	9 cut(s)	205, 484, 986, 1238, 1459, 1645, 2009, 2439, 2639
Bse1I	ACTGG	8 cut(s)	569, 1232, 1291, 1448, 1790, 1837, 2066, 2644
Bse3DI	GCAATG	3 cut(s)	845, 1295, 1592
BseBI	CCWGG	5 cut(s)	858, 1218, 1317, 1383, 2004
BseGI	GGATG	4 cut(s)	449, 1915, 2429, 2827
BseLI	CCNNNNNNNGG	9 cut(s)	205, 484, 986, 1238, 1459, 1645, 2009, 2439, 2639
BseMI	GCAATG	3 cut(s)	845, 1295, 1592
BseMII	CTCAG	3 cut(s)	179, 507, 1083
BseNI	ACTGG	8 cut(s)	569, 1232, 1291, 1448, 1790, 1837, 2066, 2644
BseRI	GAGGAG	1 cut(s)	2473
BseSI	GKGCMC	1 cut(s)	1639
BseX3I	CGGCCG	1 cut(s)	390
BseYI	CCCAGC	2 cut(s)	985, 1039
BsgI	GTGCAG	1 cut(s)	1394
Bsh1236I	CGCG	3 cut(s)	20, 110, 245
Bsh1285I	CGRYCG	1 cut(s)	393
BshFI	GGCC	5 cut(s)	169, 392, 535, 2111, 2480
BsiEI	CGRYCG	1 cut(s)	393
BsiHKAI	GWGCWC	2 cut(s)	26, 2674
BsiHKCI	CYCGRG	1 cut(s)	1947
BsiSI	CCGG	2 cut(s)	270, 2199
BslFI	GGGAC	5 cut(s)	1515, 1783, 2065, 2270, 2656
BslI	CCNNNNNNNGG	9 cut(s)	205, 484, 986, 1238, 1459, 1645, 2009, 2439, 2639
BsmAI	GTCTC	9 cut(s)	391, 400, 578, 834, 1190, 1215, 1372, 1385, 2549
BsmBI	CGTCTC	2 cut(s)	391, 400
BsmFI	GGGAC	5 cut(s)	1515, 1783, 2065, 2270, 2656
BsmI	GAATGC	1 cut(s)	1028
BsnI	GGCC	5 cut(s)	169, 392, 535, 2111, 2480
Bso31I	GGTCTC	2 cut(s)	1215, 1372
BsoBI	CYCGRG	1 cut(s)	1947
Bsp1286I	GDGCHC	5 cut(s)	26, 736, 907, 1639, 2674
Bsp143I	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
Bsp19I	CCATGG	3 cut(s)	2388, 2448, 2550
Bsp68I	TCGCGA	2 cut(s)	110, 245
BspANI	GGCC	5 cut(s)	169, 392, 535, 2111, 2480
BspCNI	CTCAG	3 cut(s)	180, 508, 1084
BspFNI	CGCG	3 cut(s)	20, 110, 245
BspHI	TCATGA	1 cut(s)	712
BspLI	GGNNCC	8 cut(s)	197, 797, 906, 1011, 1446, 1687, 2066, 2644
BspMAI	CTGCAG	1 cut(s)	2419
BspMI	ACCTGC	1 cut(s)	1564
BspPI	GGATC	4 cut(s)	206, 790, 803, 2187
BspTI	CTTAAG	1 cut(s)	656
BspTNI	GGTCTC	2 cut(s)	1215, 1372
BsrBI	CCGCTC	1 cut(s)	1946
BsrDI	GCAATG	3 cut(s)	845, 1295, 1592
BsrI	ACTGG	8 cut(s)	569, 1232, 1291, 1448, 1790, 1837, 2066, 2644
BssMI	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
BssNAI	GTATAC	1 cut(s)	2242
BssNI	GRCGYC	3 cut(s)	226, 384, 862
BssT1I	CCWWGG	8 cut(s)	357, 775, 1639, 2227, 2333, 2388, 2448, 2550
Bst1107I	GTATAC	1 cut(s)	2242
Bst2UI	CCWGG	5 cut(s)	858, 1218, 1317, 1383, 2004
Bst4CI	ACNGT	9 cut(s)	52, 341, 650, 955, 1184, 1226, 1750, 2517, 2560
Bst6I	CTCTTC	2 cut(s)	181, 881
BstACI	GRCGYC	3 cut(s)	226, 384, 862
BstAFI	CTTAAG	1 cut(s)	656
BstBAI	YACGTR	1 cut(s)	1488
BstC8I	GCNNGC	8 cut(s)	22, 127, 131, 247, 720, 1078, 1787, 2770
BstDEI	CTNAG	7 cut(s)	188, 516, 783, 1092, 1100, 2422, 2720
BstDSI	CCRYGG	3 cut(s)	2388, 2448, 2550
BstF5I	GGATG	4 cut(s)	449, 1915, 2429, 2827
BstFNI	CGCG	3 cut(s)	20, 110, 245
BstHHI	GCGC	2 cut(s)	449, 690
BstKTI	GATC	7 cut(s)	87, 214, 798, 1201, 2182, 2374, 2765
BstMAI	GTCTC	9 cut(s)	391, 400, 578, 834, 1190, 1215, 1372, 1385, 2549
BstMBI	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
BstMCI	CGRYCG	1 cut(s)	393
BstNI	CCWGG	5 cut(s)	858, 1218, 1317, 1383, 2004
BstNSI	RCATGY	3 cut(s)	438, 1823, 2248
BstPAI	GACNNNNGTC	1 cut(s)	404
BstSCI	CCNGG	5 cut(s)	856, 1216, 1315, 1381, 2002
BstSFI	CTRYAG	6 cut(s)	1656, 1749, 2016, 2289, 2415, 2691
BstSLI	GKGCMC	1 cut(s)	1639
BstSNI	TACGTA	1 cut(s)	1488
BstUI	CGCG	3 cut(s)	20, 110, 245
BstV2I	GAAGAC	2 cut(s)	1001, 1118
BstX2I	RGATCY	2 cut(s)	84, 795
BstXI	CCANNNNNNTGG	1 cut(s)	2075
BstYI	RGATCY	2 cut(s)	84, 795
BstZ17I	GTATAC	1 cut(s)	2242
BstZI	CGGCCG	1 cut(s)	390
BsuRI	GGCC	5 cut(s)	169, 392, 535, 2111, 2480
BtgI	CCRYGG	3 cut(s)	2388, 2448, 2550
BtgZI	GCGATG	3 cut(s)	333, 360, 393
BtsCI	GGATG	4 cut(s)	449, 1915, 2429, 2827
BtsI	GCAGTG	2 cut(s)	1087, 1615
BtsIMutI	CAGTG	3 cut(s)	1087, 1615, 1746
BtuMI	TCGCGA	2 cut(s)	110, 245
BveI	ACCTGC	1 cut(s)	1564
Cac8I	GCNNGC	8 cut(s)	22, 127, 131, 247, 720, 1078, 1787, 2770
CaiI	CAGNNNCTG	2 cut(s)	1188, 1459
CciI	TCATGA	1 cut(s)	712
CfoI	GCGC	2 cut(s)	449, 690
Cfr13I	GGNCC	4 cut(s)	854, 2065, 2110, 2643
CseI	GACGC	5 cut(s)	215, 229, 246, 851, 1445
CsiI	ACCWGGT	1 cut(s)	1381
Csp6I	GTAC	3 cut(s)	1263, 2151, 2278
CviQI	GTAC	3 cut(s)	1263, 2151, 2278
DdeI	CTNAG	7 cut(s)	188, 516, 783, 1092, 1100, 2422, 2720
DpnI	GATC	7 cut(s)	86, 213, 797, 1200, 2181, 2373, 2764
DpnII	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
DriI	GACNNNNNGTC	1 cut(s)	225
EaeI	YGGCCR	1 cut(s)	390
EagI	CGGCCG	1 cut(s)	390
Eam1104I	CTCTTC	2 cut(s)	181, 881
Eam1105I	GACNNNNNGTC	1 cut(s)	225
EarI	CTCTTC	2 cut(s)	181, 881
Ecl136II	GAGCTC	1 cut(s)	2672
EclXI	CGGCCG	1 cut(s)	390
Eco105I	TACGTA	1 cut(s)	1488
Eco130I	CCWWGG	8 cut(s)	357, 775, 1639, 2227, 2333, 2388, 2448, 2550
Eco147I	AGGCCT	2 cut(s)	169, 2480
Eco24I	GRGCYC	3 cut(s)	736, 907, 2674
Eco31I	GGTCTC	2 cut(s)	1215, 1372
Eco47I	GGWCC	3 cut(s)	854, 2065, 2643
Eco52I	CGGCCG	1 cut(s)	390
Eco53kI	GAGCTC	1 cut(s)	2672
Eco57I	CTGAAG	1 cut(s)	564
Eco88I	CYCGRG	1 cut(s)	1947
EcoICRI	GAGCTC	1 cut(s)	2672
EcoRI	GAATTC	1 cut(s)	465
EcoRII	CCWGG	5 cut(s)	856, 1216, 1315, 1381, 2002
EcoT14I	CCWWGG	8 cut(s)	357, 775, 1639, 2227, 2333, 2388, 2448, 2550
EcoT38I	GRGCYC	3 cut(s)	736, 907, 2674
ErhI	CCWWGG	8 cut(s)	357, 775, 1639, 2227, 2333, 2388, 2448, 2550
Esp3I	CGTCTC	2 cut(s)	391, 400
FalI	AAGNNNNNCTT	4 cut(s)	986, 1018, 1110, 1142
FaqI	GGGAC	5 cut(s)	1515, 1783, 2065, 2270, 2656
FauI	CCCGC	2 cut(s)	431, 2809
FbaI	TGATCA	1 cut(s)	2371
FblI	GTMKAC	1 cut(s)	2241
FokI	GGATG	4 cut(s)	456, 1902, 2416, 2814
FriOI	GRGCYC	3 cut(s)	736, 907, 2674
FspBI	CTAG	6 cut(s)	470, 498, 752, 1418, 2223, 2472
FspI	TGCGCA	1 cut(s)	448
GlaI	GCGC	2 cut(s)	448, 689
GsaI	CCCAGC	2 cut(s)	989, 1043
GsuI	CTGGAG	7 cut(s)	1239, 1308, 1431, 1549, 1914, 2640, 2688
HaeIII	GGCC	5 cut(s)	169, 392, 535, 2111, 2480
HapII	CCGG	2 cut(s)	270, 2199
HgaI	GACGC	5 cut(s)	215, 229, 246, 851, 1445
HhaI	GCGC	2 cut(s)	449, 690
Hin1I	GRCGYC	3 cut(s)	226, 384, 862
Hin6I	GCGC	2 cut(s)	447, 688
HinP1I	GCGC	2 cut(s)	447, 688
HincII	GTYRAC	1 cut(s)	9
HindII	GTYRAC	1 cut(s)	9
HpaII	CCGG	2 cut(s)	270, 2199
HphI	GGTGA	5 cut(s)	40, 549, 1400, 1753, 2408
Hpy166II	GTNNAC	4 cut(s)	9, 1544, 1744, 2242
Hpy8I	GTNNAC	4 cut(s)	9, 1544, 1744, 2242
Hpy99I	CGWCG	3 cut(s)	231, 245, 867
HpyAV	CCTTC	2 cut(s)	186, 2305
HpyCH4III	ACNGT	9 cut(s)	52, 341, 650, 955, 1184, 1226, 1750, 2517, 2560
HpyCH4IV	ACGT	4 cut(s)	384, 1487, 1546, 2280
HpyF3I	CTNAG	7 cut(s)	188, 516, 783, 1092, 1100, 2422, 2720
HpySE526I	ACGT	4 cut(s)	384, 1487, 1546, 2280
Hsp92I	GRCGYC	3 cut(s)	226, 384, 862
HspAI	GCGC	2 cut(s)	447, 688
Ksp22I	TGATCA	1 cut(s)	2371
Kzo9I	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
LmnI	GCTCC	8 cut(s)	195, 779, 910, 1450, 1685, 2465, 2669, 2855
LweI	GCATC	7 cut(s)	337, 434, 2185, 2294, 2401, 2515, 2836
MabI	ACCWGGT	1 cut(s)	1381
MaeI	CTAG	6 cut(s)	470, 498, 752, 1418, 2223, 2472
MaeII	ACGT	4 cut(s)	384, 1487, 1546, 2280
MaeIII	GTNAC	5 cut(s)	52, 1303, 1795, 1828, 2635
MalI	GATC	7 cut(s)	86, 213, 797, 1200, 2181, 2373, 2764
MbiI	CCGCTC	1 cut(s)	1946
MboI	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
MfeI	CAATTG	3 cut(s)	525, 2610, 2661
MflI	RGATCY	2 cut(s)	84, 795
MhlI	GDGCHC	5 cut(s)	26, 736, 907, 1639, 2674
MmeI	TCCRAC	6 cut(s)	242, 403, 971, 1134, 2092, 2443
MroXI	GAANNNNTTC	2 cut(s)	998, 2348
MseI	TTAA	7 cut(s)	657, 897, 1146, 1956, 2211, 2328, 2738
MspA1I	CMGCKG	3 cut(s)	312, 1334, 1661
MspCI	CTTAAG	1 cut(s)	656
MspI	CCGG	2 cut(s)	270, 2199
MspR9I	CCNGG	5 cut(s)	858, 1218, 1317, 1383, 2004
MunI	CAATTG	3 cut(s)	525, 2610, 2661
Mva1269I	GAATGC	1 cut(s)	1028
MvaI	CCWGG	5 cut(s)	858, 1218, 1317, 1383, 2004
MvnI	CGCG	3 cut(s)	20, 110, 245
NcoI	CCATGG	3 cut(s)	2388, 2448, 2550
NdeII	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
NlaIV	GGNNCC	8 cut(s)	197, 797, 906, 1011, 1446, 1687, 2066, 2644
NmeAIII	GCCGAG	1 cut(s)	368
NmuCI	GTSAC	2 cut(s)	1303, 1795
NruI	TCGCGA	2 cut(s)	110, 245
NsbI	TGCGCA	1 cut(s)	448
NspI	RCATGY	3 cut(s)	438, 1823, 2248
PagI	TCATGA	1 cut(s)	712
PceI	AGGCCT	2 cut(s)	169, 2480
PcsI	WCGNNNNNNNCGW	3 cut(s)	390, 395, 2277
PctI	GAATGC	1 cut(s)	1028
PdmI	GAANNNNTTC	2 cut(s)	998, 2348
PfeI	GAWTC	6 cut(s)	635, 819, 1048, 1901, 2089, 2403
PflFI	GACNNNGTC	2 cut(s)	2063, 2656
PflMI	CCANNNNNTGG	2 cut(s)	1238, 1459
Ppu21I	YACGTR	1 cut(s)	1488
PshAI	GACNNNNGTC	1 cut(s)	404
Psp124BI	GAGCTC	1 cut(s)	2674
Psp6I	CCWGG	5 cut(s)	856, 1216, 1315, 1381, 2002
PspFI	CCCAGC	2 cut(s)	985, 1039
PspGI	CCWGG	5 cut(s)	856, 1216, 1315, 1381, 2002
PspN4I	GGNNCC	8 cut(s)	197, 797, 906, 1011, 1446, 1687, 2066, 2644
PspPI	GGNCC	4 cut(s)	854, 2065, 2110, 2643
PstI	CTGCAG	1 cut(s)	2419
PstNI	CAGNNNCTG	2 cut(s)	1188, 1459
PsuI	RGATCY	2 cut(s)	84, 795
PsyI	GACNNNGTC	2 cut(s)	2063, 2656
PvuII	CAGCTG	2 cut(s)	1334, 1661
RruI	TCGCGA	2 cut(s)	110, 245
RsaI	GTAC	3 cut(s)	1264, 2152, 2279
RsaNI	GTAC	3 cut(s)	1263, 2151, 2278
SacI	GAGCTC	1 cut(s)	2674
SaqAI	TTAA	7 cut(s)	657, 897, 1146, 1956, 2211, 2328, 2738
Sau3AI	GATC	7 cut(s)	84, 211, 795, 1198, 2179, 2371, 2762
Sau96I	GGNCC	4 cut(s)	854, 2065, 2110, 2643
ScaI	AGTACT	1 cut(s)	2152
ScrFI	CCNGG	5 cut(s)	858, 1218, 1317, 1383, 2004
SduI	GDGCHC	5 cut(s)	26, 736, 907, 1639, 2674
SexAI	ACCWGGT	1 cut(s)	1381
SfaNI	GCATC	7 cut(s)	337, 434, 2185, 2294, 2401, 2515, 2836
SfcI	CTRYAG	6 cut(s)	1656, 1749, 2016, 2289, 2415, 2691
SinI	GGWCC	3 cut(s)	854, 2065, 2643
SmlI	CTYRAG	4 cut(s)	656, 1871, 1880, 2683
SmoI	CTYRAG	4 cut(s)	656, 1871, 1880, 2683
SnaBI	TACGTA	1 cut(s)	1488
SseBI	AGGCCT	2 cut(s)	169, 2480
SspI	AATATT	2 cut(s)	2380, 2797
SspMI	CTAG	6 cut(s)	470, 498, 752, 1418, 2223, 2472
SstI	GAGCTC	1 cut(s)	2674
StuI	AGGCCT	2 cut(s)	169, 2480
StyD4I	CCNGG	5 cut(s)	856, 1216, 1315, 1381, 2002
StyI	CCWWGG	8 cut(s)	357, 775, 1639, 2227, 2333, 2388, 2448, 2550
TaaI	ACNGT	9 cut(s)	52, 341, 650, 955, 1184, 1226, 1750, 2517, 2560
TaiI	ACGT	4 cut(s)	387, 1490, 1549, 2283
TaqI	TCGA	7 cut(s)	29, 115, 182, 398, 417, 1736, 1850
TatI	WGTACW	1 cut(s)	2150
TauI	GCSGC	6 cut(s)	297, 309, 315, 318, 1514, 1946
TfiI	GAWTC	6 cut(s)	635, 819, 1048, 1901, 2089, 2403
Tru1I	TTAA	7 cut(s)	657, 897, 1146, 1956, 2211, 2328, 2738
Tru9I	TTAA	7 cut(s)	657, 897, 1146, 1956, 2211, 2328, 2738
TscAI	CASTG	3 cut(s)	1087, 1615, 1753
TseFI	GTSAC	2 cut(s)	1303, 1795
Tsp45I	GTSAC	2 cut(s)	1303, 1795
TspGWI	ACGGA	1 cut(s)	2646
TspRI	CASTG	3 cut(s)	1087, 1615, 1753
Tth111I	GACNNNGTC	2 cut(s)	2063, 2656
Van91I	CCANNNNNTGG	2 cut(s)	1238, 1459
Vha464I	CTTAAG	1 cut(s)	656
VpaK11BI	GGWCC	3 cut(s)	854, 2065, 2643
XapI	RAATTY	4 cut(s)	465, 1576, 1803, 2707
XbaI	TCTAGA	1 cut(s)	469
XceI	RCATGY	3 cut(s)	438, 1823, 2248
XcmI	CCANNNNNNNNNTGG	2 cut(s)	987, 2800
XmiI	GTMKAC	1 cut(s)	2241
XmnI	GAANNNNTTC	2 cut(s)	998, 2348
XspI	CTAG	6 cut(s)	470, 498, 752, 1418, 2223, 2472
ZraI	GACGTC	1 cut(s)	385
ZrmI	AGTACT	1 cut(s)	2152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.