Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010143

Physical Location & Seq

Genomic Coordinates Reverse (-)

36923917 .. 37047063

Gene Structure 123147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0230000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGAAGTAGTAGAAGAAATTGTGATTGTTGGAGCTGGAATTGCTGGCCTTACAACTTCCTTAGGACTTCACAGGCTGGGAATTCGGAGCTTAGTGTTGGAAACATCAGAGAGTTTGAGGACGACTGGATTTGCATTCTCAACATGGACAAATGCCTGGAAGGCCTTGGATGCCATTGGAATTGGGGAATCTCTTCGGAGACAACACGAGACACTTCATAGGAATGTTACTTACTCAACAGTTTCTGGGCTTCCAGTGTTTGAGATGTCACTGAAGGACAAGGGAAAACAAGGAGACCATGAAGTTCGTTGCGTGCAGAGGAAGTTGTTGTTGGAAGCCCTTGCAAATGAACTTCCTAGTGGCACAGTCAGGTTCTCCTCCAAGGTGGTTTCCATTGAGGAATCAGGCTACTTTAAGCTGCTGCATCTTGCTGATGGAACCATCCTCAAGGCCAAGGTTTTGGTTGGGTGTGATGGAGTGAACTCAGTGGTGGCCAAATGGCTGGGCTTCAAGCCACCGGCCTTTACAGGGAGACATGCTATAAGAGGTCGTGCGACCTACAAGAACAGTCATGGGTTTGATCCCATGTTCATGCAGTTCTTTGGCAATGGTGTTAGATCTGGTGCCATCCCTTGTGATGATAAAACTGTTTATTGGTTCTTCACTTGGACTCCAACCAACCAAGAGAAAGAGCTAGAAGAAAACCCAGCTCAGTTGAAGCAATATGTGTTAAGCAAGCTCGGAAAGGTATCAGATGAAGTACGGGCCGTTGTGGAAAACACCGATTTGGATGCTTTTATATCCTCTCCATTGAGATATAGGCATCCTTGGGAACTTATTTGGGGAAATATTAGCAAAGGTAATGTATGTGTAGCCGGAGACGCGCTCCACCCCATGACCCCAGACATTGGACAAGGTGGCTGTGCTGCATTAGAGGACGGTCTTGTATTATCAAGGTGTCTTGGTGAGGCTTTGTTGAACAATAGGAGCCAAGAAATTAGAGATGAAGGTGAACAAGGAAAAGAGGAATATAAAATGATTGAAAGAGGGTTGAATAAGTATGCCAGTGAGAGGAGATGGAGAAGTTTTGATCTTATTAGTACAGCTTATGTGGTTGGTTTTTTACAGGAGGCTGATGGAAAAATAATGACTTTCTTGAGGGACAAGTTTTTCTCTCAAATCCTGGCCGGGTTGCTGTTGAAGAAGGCTGATTATGATTGTGTTAACTTCGACAGAGCACTGAGACCAGCTCAGAACGATCCAGATGATGATCTTTATATTTATAGAAAGCCTCGGATGTCTAGTTTCCAGATCTTTTTACGGTTCGTCAATATCATTTTTCTAGAGGAAGTTATGACCGATTTAGTACAAGAAGGTCAGGCTGCGCGTGAATCTGAGGTTGGACGGGAATTTATGTTTCGAAGCCCAAATCACACCGAAAAGCCCGAGGACGAGTTTGTGCTTCATATATCAGCTCAATATAGACAAATGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0044212 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT zf-B_box

Protein Analysis

498

Amino Acids

56.1

Weight (kDa)

6.07

Isoelectric Point (pI)

36.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	6 - 335	2.9e-24	FAD binding domain
Lycopene_cycl	PF05834	7 - 200	2.8e-07	Lycopene cyclase protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47890 AT2G47890 AT2G47890
fragaria_vesca	FvH4_2g24910 FvH4_2g24910
malus_domestica	MD03G1277600.v1.1 MD11G1299600.v1.1
prunus_persica	Prupe.8G253900_v2.0.a1 Prupe.8G253900_v2.0.a1
pyrus_communis	pycom03g22100 pycom11g26320
rosa_chinensis	RchiOBHm_Chr6g0292831
rosa_laevigata	RLG00000011989
rosa_multiflora	Rmu_sc0000639.1_g000022
rosa_roxburghii	Rroxscaffold_7G00174670
rosa_rugosa	Rorug06G0230000
rosa_samantha	Rh6AG343300 Rh6BG350500 Rh6CG357500 Rh6DG343400
rosa_wichuraiana	Rw6G029940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	623
AccB7I	CCANNNNNTGG	1 cut(s)	908
AccII	CGCG	2 cut(s)	884, 1387
AclWI	GGATC	2 cut(s)	575, 1253
AcoI	YGGCCR	2 cut(s)	492, 1185
AcsI	RAATTY	2 cut(s)	81, 1409
AcuI	CTGAAG	1 cut(s)	293
AfaI	GTAC	3 cut(s)	762, 1102, 1368
AfiI	CCNNNNNNNGG	3 cut(s)	528, 908, 1071
AgsI	TTSAA	6 cut(s)	511, 718, 979, 1043, 1054, 1201
AjnI	CCWGG	2 cut(s)	155, 1182
AjuI	GAANNNNNNNTTGG	4 cut(s)	314, 346, 1383, 1415
AluBI	AGCT	9 cut(s)	35, 90, 418, 694, 710, 739, 1106, 1250, 1475
AluI	AGCT	9 cut(s)	35, 90, 418, 694, 710, 739, 1106, 1250, 1475
Alw21I	GWGCWC	1 cut(s)	1240
Alw26I	GTCTC	6 cut(s)	193, 203, 288, 526, 873, 1237
AlwI	GGATC	2 cut(s)	575, 1253
AlwNI	CAGNNNCTG	1 cut(s)	245
Ama87I	CYCGRG	1 cut(s)	1445
AoxI	GGCC	7 cut(s)	46, 162, 450, 492, 519, 765, 1185
ApeKI	GCWGC	4 cut(s)	418, 421, 926, 1382
ApoI	RAATTY	2 cut(s)	81, 1409
Asp700I	GAANNNNTTC	1 cut(s)	192
AspLEI	GCGC	2 cut(s)	886, 1387
AspS9I	GGNCC	1 cut(s)	765
AsuC2I	CCSGG	1 cut(s)	1189
AsuHPI	GGTGA	2 cut(s)	977, 1022
AsuII	TTCGAA	1 cut(s)	1420
AvaI	CYCGRG	1 cut(s)	1445
AxyI	CCTNAGG	1 cut(s)	61
BalI	TGGCCA	1 cut(s)	494
BanI	GGYRCC	1 cut(s)	623
BauI	CACGAG	1 cut(s)	206
Bbv12I	GWGCWC	1 cut(s)	1240
BbvI	GCAGC	4 cut(s)	405, 408, 913, 1369
BccI	CCATC	6 cut(s)	428, 449, 467, 635, 1071, 1130
BceAI	ACGGC	1 cut(s)	752
BcgI	CGANNNNNNTGC	2 cut(s)	773, 807
BciT130I	CCWGG	2 cut(s)	157, 1184
BcnI	CCSGG	1 cut(s)	1189
BcoDI	GTCTC	6 cut(s)	193, 203, 288, 526, 873, 1237
BfaI	CTAG	4 cut(s)	357, 695, 1302, 1343
BglI	GCCNNNNNGGC	1 cut(s)	161
BglII	AGATCT	2 cut(s)	617, 1311
BisI	GCNGC	4 cut(s)	419, 422, 927, 1383
BlsI	GCNGC	4 cut(s)	420, 423, 928, 1384
Bme1390I	CCNGG	3 cut(s)	157, 1184, 1189
BmeT110I	CYCGRG	1 cut(s)	1445
BmgT120I	GGNCC	1 cut(s)	765
BmiI	GGNNCC	3 cut(s)	439, 625, 989
BmrFI	CCNGG	3 cut(s)	157, 1184, 1189
BmsI	GCATC	4 cut(s)	160, 433, 781, 832
BplI	GAGNNNNNCTC	4 cut(s)	870, 902, 1234, 1266
Bpu14I	TTCGAA	1 cut(s)	1420
BpuEI	CTTGAG	2 cut(s)	431, 1177
BpuMI	CCSGG	1 cut(s)	1189
BsaBI	GATNNNNATC	1 cut(s)	1269
BsaI	GGTCTC	2 cut(s)	288, 1237
BsaJI	CCNNGG	6 cut(s)	165, 381, 453, 827, 1292, 1446
BsaXI	ACNNNNNCTCC	2 cut(s)	655, 685
Bsc4I	CCNNNNNNNGG	3 cut(s)	528, 908, 1071
Bse118I	RCCGGY	1 cut(s)	517
Bse1I	ACTGG	3 cut(s)	130, 254, 1065
Bse21I	CCTNAGG	1 cut(s)	61
Bse3DI	GCAATG	1 cut(s)	613
Bse8I	GATNNNNATC	1 cut(s)	1269
BseBI	CCWGG	2 cut(s)	157, 1184
BseDI	CCNNGG	6 cut(s)	165, 381, 453, 827, 1292, 1446
BseGI	GGATG	6 cut(s)	175, 441, 627, 796, 823, 1302
BseJI	GATNNNNATC	1 cut(s)	1269
BseLI	CCNNNNNNNGG	3 cut(s)	528, 908, 1071
BseMI	GCAATG	1 cut(s)	613
BseMII	CTCAG	5 cut(s)	498, 725, 1232, 1265, 1386
BseNI	ACTGG	3 cut(s)	130, 254, 1065
BseRI	GAGGAG	2 cut(s)	367, 1087
BseXI	GCAGC	4 cut(s)	405, 408, 913, 1369
BseYI	CCCAGC	3 cut(s)	76, 502, 706
BsgI	GTGCAG	1 cut(s)	335
Bsh1236I	CGCG	2 cut(s)	884, 1387
BshFI	GGCC	7 cut(s)	48, 164, 452, 494, 521, 767, 1187
BshNI	GGYRCC	1 cut(s)	623
BsiHKAI	GWGCWC	1 cut(s)	1240
BsiHKCI	CYCGRG	1 cut(s)	1445
BsiSI	CCGG	3 cut(s)	518, 876, 1188
BslFI	GGGAC	1 cut(s)	1175
BslI	CCNNNNNNNGG	3 cut(s)	528, 908, 1071
BsmAI	GTCTC	6 cut(s)	193, 203, 288, 526, 873, 1237
BsmBI	CGTCTC	1 cut(s)	873
BsmFI	GGGAC	1 cut(s)	1175
BsmI	GAATGC	1 cut(s)	134
BsnI	GGCC	7 cut(s)	48, 164, 452, 494, 521, 767, 1187
Bso31I	GGTCTC	2 cut(s)	288, 1237
BsoBI	CYCGRG	1 cut(s)	1445
Bsp119I	TTCGAA	1 cut(s)	1420
Bsp1286I	GDGCHC	1 cut(s)	1240
Bsp143I	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
BspANI	GGCC	7 cut(s)	48, 164, 452, 494, 521, 767, 1187
BspCNI	CTCAG	5 cut(s)	497, 724, 1233, 1264, 1387
BspFNI	CGCG	2 cut(s)	884, 1387
BspLI	GGNNCC	3 cut(s)	439, 625, 989
BspPI	GGATC	2 cut(s)	575, 1253
BspT104I	TTCGAA	1 cut(s)	1420
BspT107I	GGYRCC	1 cut(s)	623
BspTNI	GGTCTC	2 cut(s)	288, 1237
BsrDI	GCAATG	1 cut(s)	613
BsrFI	RCCGGY	1 cut(s)	517
BsrI	ACTGG	3 cut(s)	130, 254, 1065
BssAI	RCCGGY	1 cut(s)	517
BssECI	CCNNGG	6 cut(s)	165, 381, 453, 827, 1292, 1446
BssMI	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
BssSI	CACGAG	1 cut(s)	206
BssT1I	CCWWGG	4 cut(s)	165, 381, 453, 827
Bst2BI	CACGAG	1 cut(s)	206
Bst2UI	CCWGG	2 cut(s)	157, 1184
Bst4CI	ACNGT	6 cut(s)	241, 367, 569, 649, 941, 1323
Bst6I	CTCTTC	1 cut(s)	198
BstBI	TTCGAA	1 cut(s)	1420
BstC8I	GCNNGC	3 cut(s)	46, 314, 737
BstDEI	CTNAG	7 cut(s)	61, 91, 484, 711, 1241, 1251, 1395
BstF5I	GGATG	6 cut(s)	175, 441, 627, 796, 823, 1302
BstFNI	CGCG	2 cut(s)	884, 1387
BstHHI	GCGC	2 cut(s)	886, 1387
BstKTI	GATC	6 cut(s)	583, 620, 1093, 1261, 1273, 1314
BstMAI	GTCTC	6 cut(s)	193, 203, 288, 526, 873, 1237
BstMBI	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 161, 170, 881
BstNI	CCWGG	2 cut(s)	157, 1184
BstNSI	RCATGY	1 cut(s)	539
BstSCI	CCNGG	3 cut(s)	155, 1182, 1187
BstUI	CGCG	2 cut(s)	884, 1387
BstV1I	GCAGC	4 cut(s)	405, 408, 913, 1369
BstX2I	RGATCY	2 cut(s)	617, 1311
BstXI	CCANNNNNNTGG	2 cut(s)	460, 502
BstYI	RGATCY	2 cut(s)	617, 1311
Bsu36I	CCTNAGG	1 cut(s)	61
BsuRI	GGCC	7 cut(s)	48, 164, 452, 494, 521, 767, 1187
BtsCI	GGATG	6 cut(s)	175, 441, 627, 796, 823, 1302
BtsIMutI	CAGTG	5 cut(s)	261, 269, 492, 1072, 1238
Cac8I	GCNNGC	3 cut(s)	46, 314, 737
CaiI	CAGNNNCTG	1 cut(s)	245
CfoI	GCGC	2 cut(s)	886, 1387
Cfr10I	RCCGGY	1 cut(s)	517
Cfr13I	GGNCC	1 cut(s)	765
CseI	GACGC	1 cut(s)	890
Csp6I	GTAC	3 cut(s)	761, 1101, 1367
CviAII	CATG	8 cut(s)	144, 299, 536, 572, 586, 592, 895, 1494
CviQI	GTAC	3 cut(s)	761, 1101, 1367
DdeI	CTNAG	7 cut(s)	61, 91, 484, 711, 1241, 1251, 1395
DpnI	GATC	6 cut(s)	582, 619, 1092, 1260, 1272, 1313
DpnII	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
EaeI	YGGCCR	2 cut(s)	492, 1185
Eam1104I	CTCTTC	1 cut(s)	198
EarI	CTCTTC	1 cut(s)	198
Eco130I	CCWWGG	4 cut(s)	165, 381, 453, 827
Eco147I	AGGCCT	1 cut(s)	164
Eco31I	GGTCTC	2 cut(s)	288, 1237
Eco57I	CTGAAG	1 cut(s)	293
Eco81I	CCTNAGG	1 cut(s)	61
Eco88I	CYCGRG	1 cut(s)	1445
EcoRI	GAATTC	1 cut(s)	81
EcoRII	CCWGG	2 cut(s)	155, 1182
EcoT14I	CCWWGG	4 cut(s)	165, 381, 453, 827
ErhI	CCWWGG	4 cut(s)	165, 381, 453, 827
Esp3I	CGTCTC	1 cut(s)	873
FaeI	CATG	8 cut(s)	147, 302, 539, 575, 589, 595, 898, 1497
FaqI	GGGAC	1 cut(s)	1175
FatI	CATG	8 cut(s)	143, 298, 535, 571, 585, 591, 894, 1493
Fnu4HI	GCNGC	4 cut(s)	419, 422, 927, 1383
FokI	GGATG	6 cut(s)	182, 428, 614, 803, 810, 1309
Fsp4HI	GCNGC	4 cut(s)	419, 422, 927, 1383
FspBI	CTAG	4 cut(s)	357, 695, 1302, 1343
GlaI	GCGC	2 cut(s)	885, 1386
GluI	GCNGC	4 cut(s)	419, 422, 927, 1383
GsaI	CCCAGC	3 cut(s)	80, 506, 710
HaeIII	GGCC	7 cut(s)	48, 164, 452, 494, 521, 767, 1187
HapII	CCGG	3 cut(s)	518, 876, 1188
HgaI	GACGC	1 cut(s)	890
HhaI	GCGC	2 cut(s)	886, 1387
Hin1II	CATG	8 cut(s)	147, 302, 539, 575, 589, 595, 898, 1497
Hin6I	GCGC	2 cut(s)	884, 1385
HinP1I	GCGC	2 cut(s)	884, 1385
HincII	GTYRAC	1 cut(s)	1225
HindII	GTYRAC	1 cut(s)	1225
HinfI	GANTC	4 cut(s)	188, 401, 670, 1391
HpaI	GTTAAC	1 cut(s)	1225
HpaII	CCGG	3 cut(s)	518, 876, 1188
HphI	GGTGA	2 cut(s)	977, 1022
Hpy166II	GTNNAC	3 cut(s)	481, 1013, 1225
Hpy188I	TCNGA	8 cut(s)	87, 109, 198, 743, 754, 1254, 1296, 1396
Hpy188III	TCNNGA	4 cut(s)	1156, 1262, 1309, 1343
Hpy8I	GTNNAC	3 cut(s)	481, 1013, 1225
HpyAV	CCTTC	5 cut(s)	154, 268, 1001, 1198, 1367
HpyCH4III	ACNGT	6 cut(s)	241, 367, 569, 649, 941, 1323
HpyCH4V	TGCA	6 cut(s)	134, 316, 344, 424, 595, 929
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 161, 170, 881
HpyF3I	CTNAG	7 cut(s)	61, 91, 484, 711, 1241, 1251, 1395
Hsp92II	CATG	8 cut(s)	147, 302, 539, 575, 589, 595, 898, 1497
HspAI	GCGC	2 cut(s)	884, 1385
KspAI	GTTAAC	1 cut(s)	1225
Kzo9I	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
LmnI	GCTCC	4 cut(s)	32, 87, 891, 987
Lsp1109I	GCAGC	4 cut(s)	405, 408, 913, 1369
LweI	GCATC	4 cut(s)	160, 433, 781, 832
MaeI	CTAG	4 cut(s)	357, 695, 1302, 1343
MaeIII	GTNAC	2 cut(s)	226, 267
MalI	GATC	6 cut(s)	582, 619, 1092, 1260, 1272, 1313
MboI	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
MboII	GAAGA	5 cut(s)	26, 185, 652, 710, 1213
MflI	RGATCY	2 cut(s)	617, 1311
MhlI	GDGCHC	1 cut(s)	1240
MlsI	TGGCCA	1 cut(s)	494
MluCI	AATT	6 cut(s)	18, 39, 81, 180, 996, 1409
MluNI	TGGCCA	1 cut(s)	494
MlyI	GAGTC	1 cut(s)	664
MmeI	TCCRAC	5 cut(s)	10, 78, 312, 698, 1381
Mox20I	TGGCCA	1 cut(s)	494
MroXI	GAANNNNTTC	1 cut(s)	192
MscI	TGGCCA	1 cut(s)	494
MseI	TTAA	3 cut(s)	414, 731, 1224
MslI	CAYNNNNRTG	2 cut(s)	222, 590
Msp20I	TGGCCA	1 cut(s)	494
MspI	CCGG	3 cut(s)	518, 876, 1188
MspR9I	CCNGG	3 cut(s)	157, 1184, 1189
Mva1269I	GAATGC	1 cut(s)	134
MvaI	CCWGG	2 cut(s)	157, 1184
MvnI	CGCG	2 cut(s)	884, 1387
MwoI	GCNNNNNNNGC	4 cut(s)	41, 161, 170, 881
NciI	CCSGG	1 cut(s)	1189
NdeII	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
NlaIII	CATG	8 cut(s)	147, 302, 539, 575, 589, 595, 898, 1497
NlaIV	GGNNCC	3 cut(s)	439, 625, 989
NmuCI	GTSAC	1 cut(s)	267
NspI	RCATGY	1 cut(s)	539
NspV	TTCGAA	1 cut(s)	1420
PceI	AGGCCT	1 cut(s)	164
PctI	GAATGC	1 cut(s)	134
PdmI	GAANNNNTTC	1 cut(s)	192
PfeI	GAWTC	3 cut(s)	188, 401, 1391
PflMI	CCANNNNNTGG	1 cut(s)	908
PkrI	GCNGC	4 cut(s)	420, 423, 928, 1384
PleI	GAGTC	1 cut(s)	664
PpsI	GAGTC	1 cut(s)	664
Psp6I	CCWGG	2 cut(s)	155, 1182
PspFI	CCCAGC	3 cut(s)	76, 502, 706
PspGI	CCWGG	2 cut(s)	155, 1182
PspN4I	GGNNCC	3 cut(s)	439, 625, 989
PspPI	GGNCC	1 cut(s)	765
PstNI	CAGNNNCTG	1 cut(s)	245
PsuI	RGATCY	2 cut(s)	617, 1311
RsaI	GTAC	3 cut(s)	762, 1102, 1368
RsaNI	GTAC	3 cut(s)	761, 1101, 1367
RseI	CAYNNNNRTG	2 cut(s)	222, 590
SaqAI	TTAA	3 cut(s)	414, 731, 1224
SatI	GCNGC	4 cut(s)	419, 422, 927, 1383
Sau3AI	GATC	6 cut(s)	580, 617, 1090, 1258, 1270, 1311
Sau96I	GGNCC	1 cut(s)	765
SchI	GAGTC	1 cut(s)	664
ScrFI	CCNGG	3 cut(s)	157, 1184, 1189
SduI	GDGCHC	1 cut(s)	1240
SfaNI	GCATC	4 cut(s)	160, 433, 781, 832
SfuI	TTCGAA	1 cut(s)	1420
SmiMI	CAYNNNNRTG	2 cut(s)	222, 590
SmlI	CTYRAG	2 cut(s)	446, 1156
SmoI	CTYRAG	2 cut(s)	446, 1156
Sse9I	AATT	6 cut(s)	18, 39, 81, 180, 996, 1409
SseBI	AGGCCT	1 cut(s)	164
SspI	AATATT	1 cut(s)	850
SspMI	CTAG	4 cut(s)	357, 695, 1302, 1343
StuI	AGGCCT	1 cut(s)	164
StyD4I	CCNGG	3 cut(s)	155, 1182, 1187
StyI	CCWWGG	4 cut(s)	165, 381, 453, 827
TaaI	ACNGT	6 cut(s)	241, 367, 569, 649, 941, 1323
TaqI	TCGA	2 cut(s)	1230, 1420
TaqII	GACCGA	1 cut(s)	1373
TasI	AATT	6 cut(s)	18, 39, 81, 180, 996, 1409
TatI	WGTACW	2 cut(s)	1100, 1366
TfiI	GAWTC	3 cut(s)	188, 401, 1391
Tru1I	TTAA	3 cut(s)	414, 731, 1224
Tru9I	TTAA	3 cut(s)	414, 731, 1224
TscAI	CASTG	5 cut(s)	261, 276, 492, 1072, 1245
TseFI	GTSAC	1 cut(s)	267
TseI	GCWGC	4 cut(s)	418, 421, 926, 1382
Tsp45I	GTSAC	1 cut(s)	267
TspDTI	ATGAA	7 cut(s)	206, 315, 363, 580, 771, 1020, 1454
TspRI	CASTG	5 cut(s)	261, 276, 492, 1072, 1245
Van91I	CCANNNNNTGG	1 cut(s)	908
XapI	RAATTY	2 cut(s)	81, 1409
XbaI	TCTAGA	1 cut(s)	1342
XceI	RCATGY	1 cut(s)	539
XmnI	GAANNNNTTC	1 cut(s)	192
XspI	CTAG	4 cut(s)	357, 695, 1302, 1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.