Hydrophobic seed protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g28920 |
| malus_domestica | MD15G1126700.v1.1 |
| prunus_persica | Prupe.1G482500_v2.0.a1 |
| pyrus_communis | pycom15g11430 |
| rosa_chinensis | RchiOBHm_Chr6g0297661 RchiOBHm_Chr6g0297721 RchiOBHm_Chr6g0297741 |
| rosa_laevigata | RLG00000011567 RLG00000011572 |
| rosa_multiflora | Rmu_co8194776.1_g000001 Rmu_sc0007683.1_g000005 Rmu_sc0007847.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00170240 Rroxscaffold_7G00170260 Rroxscaffold_7G00179090 |
| rosa_rugosa | Rorug06G0274800 Rorug06G0275100 |
| rosa_samantha | Rh6AG385400 Rh6AG385600 Rh6BG394100 Rh6CG399900 Rh6DG386300 |
| rosa_wichuraiana | Rw6G033580 Rw6G033610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 256 |
| AccII | CGCG | 1 cut(s) | 150 |
| AclWI | GGATC | 1 cut(s) | 221 |
| AcoI | YGGCCR | 1 cut(s) | 109 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 256 |
| AflIII | ACRYGT | 1 cut(s) | 48 |
| AlwI | GGATC | 1 cut(s) | 221 |
| AoxI | GGCC | 1 cut(s) | 109 |
| ApeKI | GCWGC | 2 cut(s) | 90, 179 |
| AseI | ATTAAT | 1 cut(s) | 191 |
| AsuHPI | GGTGA | 1 cut(s) | 271 |
| BalI | TGGCCA | 1 cut(s) | 111 |
| BbvI | GCAGC | 2 cut(s) | 102, 166 |
| BisI | GCNGC | 2 cut(s) | 91, 180 |
| BlpI | GCTNAGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 2 cut(s) | 92, 181 |
| BmiI | GGNNCC | 1 cut(s) | 277 |
| BmrI | ACTGGG | 1 cut(s) | 216 |
| BmuI | ACTGGG | 1 cut(s) | 216 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 141 |
| BpuEI | CTTGAG | 1 cut(s) | 256 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 27, 57 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 256 |
| Bse1I | ACTGG | 2 cut(s) | 222, 257 |
| BseGI | GGATG | 1 cut(s) | 79 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 256 |
| BseNI | ACTGG | 2 cut(s) | 222, 257 |
| BseXI | GCAGC | 2 cut(s) | 102, 166 |
| Bsh1236I | CGCG | 1 cut(s) | 150 |
| BshFI | GGCC | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 256 |
| BsnI | GGCC | 1 cut(s) | 111 |
| Bsp143I | GATC | 2 cut(s) | 117, 226 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 141 |
| BspANI | GGCC | 1 cut(s) | 111 |
| BspFNI | CGCG | 1 cut(s) | 150 |
| BspLI | GGNNCC | 1 cut(s) | 277 |
| BspPI | GGATC | 1 cut(s) | 221 |
| BsrI | ACTGG | 2 cut(s) | 222, 257 |
| BssMI | GATC | 2 cut(s) | 117, 226 |
| Bst4CI | ACNGT | 2 cut(s) | 64, 86 |
| Bst6I | CTCTTC | 1 cut(s) | 19 |
| BstDEI | CTNAG | 1 cut(s) | 141 |
| BstF5I | GGATG | 1 cut(s) | 79 |
| BstFNI | CGCG | 1 cut(s) | 150 |
| BstKTI | GATC | 2 cut(s) | 120, 229 |
| BstMBI | GATC | 2 cut(s) | 117, 226 |
| BstNSI | RCATGY | 1 cut(s) | 52 |
| BstUI | CGCG | 1 cut(s) | 150 |
| BstV1I | GCAGC | 2 cut(s) | 102, 166 |
| BsuRI | GGCC | 1 cut(s) | 111 |
| BtsCI | GGATG | 1 cut(s) | 79 |
| BtsIMutI | CAGTG | 2 cut(s) | 229, 250 |
| CviAII | CATG | 4 cut(s) | 49, 113, 121, 272 |
| CviJI | RGCY | 3 cut(s) | 111, 145, 219 |
| CviKI_1 | RGCY | 3 cut(s) | 111, 145, 219 |
| DdeI | CTNAG | 1 cut(s) | 141 |
| DpnI | GATC | 2 cut(s) | 119, 228 |
| DpnII | GATC | 2 cut(s) | 117, 226 |
| EaeI | YGGCCR | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 1 cut(s) | 19 |
| EarI | CTCTTC | 1 cut(s) | 19 |
| FaeI | CATG | 4 cut(s) | 52, 116, 124, 275 |
| FaiI | YATR | 8 cut(s) | 50, 114, 122, 173, 186, 197, 232, 273 |
| FatI | CATG | 4 cut(s) | 48, 112, 120, 271 |
| Fnu4HI | GCNGC | 2 cut(s) | 91, 180 |
| FokI | GGATG | 1 cut(s) | 86 |
| Fsp4HI | GCNGC | 2 cut(s) | 91, 180 |
| GluI | GCNGC | 2 cut(s) | 91, 180 |
| HaeIII | GGCC | 1 cut(s) | 111 |
| Hin1II | CATG | 4 cut(s) | 52, 116, 124, 275 |
| HincII | GTYRAC | 1 cut(s) | 154 |
| HindII | GTYRAC | 1 cut(s) | 154 |
| HphI | GGTGA | 1 cut(s) | 271 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 54, 154 |
| Hpy188I | TCNGA | 1 cut(s) | 161 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 54, 154 |
| HpyCH4III | ACNGT | 2 cut(s) | 64, 86 |
| HpyCH4V | TGCA | 1 cut(s) | 90 |
| HpyF3I | CTNAG | 1 cut(s) | 141 |
| Hsp92II | CATG | 4 cut(s) | 52, 116, 124, 275 |
| Kzo9I | GATC | 2 cut(s) | 117, 226 |
| LpnPI | CCDG | 3 cut(s) | 219, 235, 238 |
| Lsp1109I | GCAGC | 2 cut(s) | 102, 166 |
| MaeIII | GTNAC | 1 cut(s) | 259 |
| MalI | GATC | 2 cut(s) | 119, 228 |
| MboI | GATC | 2 cut(s) | 117, 226 |
| MboII | GAAGA | 2 cut(s) | 36, 179 |
| MlsI | TGGCCA | 1 cut(s) | 111 |
| MluCI | AATT | 2 cut(s) | 78, 192 |
| MluNI | TGGCCA | 1 cut(s) | 111 |
| MnlI | CCTC | 2 cut(s) | 31, 156 |
| Mox20I | TGGCCA | 1 cut(s) | 111 |
| MscI | TGGCCA | 1 cut(s) | 111 |
| MseI | TTAA | 2 cut(s) | 191, 283 |
| Msp20I | TGGCCA | 1 cut(s) | 111 |
| MvnI | CGCG | 1 cut(s) | 150 |
| NdeII | GATC | 2 cut(s) | 117, 226 |
| NlaIII | CATG | 4 cut(s) | 52, 116, 124, 275 |
| NlaIV | GGNNCC | 1 cut(s) | 277 |
| NmuCI | GTSAC | 1 cut(s) | 259 |
| NspI | RCATGY | 1 cut(s) | 52 |
| PciI | ACATGT | 1 cut(s) | 48 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 256 |
| PkrI | GCNGC | 2 cut(s) | 92, 181 |
| PscI | ACATGT | 1 cut(s) | 48 |
| PshBI | ATTAAT | 1 cut(s) | 191 |
| PspN4I | GGNNCC | 1 cut(s) | 277 |
| SaqAI | TTAA | 2 cut(s) | 191, 283 |
| SatI | GCNGC | 2 cut(s) | 91, 180 |
| Sau3AI | GATC | 2 cut(s) | 117, 226 |
| SetI | ASST | 1 cut(s) | 42 |
| SmlI | CTYRAG | 1 cut(s) | 235 |
| SmoI | CTYRAG | 1 cut(s) | 235 |
| Sse9I | AATT | 2 cut(s) | 78, 192 |
| TaaI | ACNGT | 2 cut(s) | 64, 86 |
| TasI | AATT | 2 cut(s) | 78, 192 |
| Tru1I | TTAA | 2 cut(s) | 191, 283 |
| Tru9I | TTAA | 2 cut(s) | 191, 283 |
| TscAI | CASTG | 2 cut(s) | 229, 257 |
| TseFI | GTSAC | 1 cut(s) | 259 |
| TseI | GCWGC | 2 cut(s) | 90, 179 |
| Tsp45I | GTSAC | 1 cut(s) | 259 |
| TspDTI | ATGAA | 2 cut(s) | 180, 260 |
| TspRI | CASTG | 2 cut(s) | 229, 257 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 256 |
| VspI | ATTAAT | 1 cut(s) | 191 |
| XceI | RCATGY | 1 cut(s) | 52 |