Nuclear nucleic acid-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25080 |
| fragaria_vesca | FvH4_2g41170 FvH4_2g41170 |
| malus_domestica | MD08G1055900.v1.1 |
| prunus_persica | Prupe.1G394400_v2.0.a1 Prupe.1G394400_v2.0.a1 Prupe.1G394400_v2.0.a1 Prupe.1G394400_v2.0.a1 Prupe.1G394400_v2.0.a1 |
| pyrus_communis | pycom08g04590 |
| rosa_chinensis | RchiOBHm_Chr6g0299361 |
| rosa_laevigata | RLG00000011439 |
| rosa_multiflora | Rmu_sc0016112.1_g000001 Rmu_ssc0000374.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00168760 |
| rosa_rugosa | Rorug06G0287400 |
| rosa_samantha | Rh6AG399100 Rh6BG407500 Rh6CG413400 Rh6DG400300 |
| rosa_wichuraiana | Rw6G034940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 375 |
| AccB1I | GGYRCC | 2 cut(s) | 769, 838 |
| AccII | CGCG | 2 cut(s) | 64, 1889 |
| AciI | CCGC | 5 cut(s) | 62, 138, 1609, 1887, 2152 |
| AclI | AACGTT | 1 cut(s) | 609 |
| AclWI | GGATC | 5 cut(s) | 40, 469, 709, 867, 2232 |
| AcoI | YGGCCR | 1 cut(s) | 1950 |
| AcsI | RAATTY | 3 cut(s) | 11, 155, 1364 |
| AcyI | GRCGYC | 1 cut(s) | 372 |
| AdeI | CACNNNGTG | 1 cut(s) | 987 |
| AfaI | GTAC | 4 cut(s) | 299, 1255, 1720, 1924 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 96, 339, 881, 1400, 1634 |
| AflIII | ACRYGT | 1 cut(s) | 2240 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 376 |
| AhlI | ACTAGT | 1 cut(s) | 950 |
| AjnI | CCWGG | 2 cut(s) | 436, 2075 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1122, 1154 |
| Alw21I | GWGCWC | 2 cut(s) | 481, 1393 |
| Alw26I | GTCTC | 3 cut(s) | 318, 575, 619 |
| AlwI | GGATC | 5 cut(s) | 40, 469, 709, 867, 2232 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1235 |
| Ama87I | CYCGRG | 2 cut(s) | 480, 2218 |
| AoxI | GGCC | 1 cut(s) | 1950 |
| ApeKI | GCWGC | 1 cut(s) | 84 |
| ApoI | RAATTY | 3 cut(s) | 11, 155, 1364 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 863, 895, 2352, 2384 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 310 |
| AspLEI | GCGC | 1 cut(s) | 1859 |
| AspS9I | GGNCC | 2 cut(s) | 378, 681 |
| AsuC2I | CCSGG | 1 cut(s) | 97 |
| AsuHPI | GGTGA | 6 cut(s) | 51, 896, 1093, 2012, 2319, 2510 |
| AvaI | CYCGRG | 2 cut(s) | 480, 2218 |
| AvaII | GGWCC | 2 cut(s) | 378, 681 |
| BaeGI | GKGCMC | 1 cut(s) | 774 |
| BanI | GGYRCC | 2 cut(s) | 769, 838 |
| BanII | GRGCYC | 1 cut(s) | 481 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 218, 250 |
| BauI | CACGAG | 1 cut(s) | 721 |
| BbsI | GAAGAC | 1 cut(s) | 221 |
| Bbv12I | GWGCWC | 2 cut(s) | 481, 1393 |
| BbvI | GCAGC | 1 cut(s) | 96 |
| BccI | CCATC | 6 cut(s) | 113, 671, 805, 978, 2459, 2489 |
| BciT130I | CCWGG | 2 cut(s) | 438, 2077 |
| BcnI | CCSGG | 1 cut(s) | 97 |
| BcoDI | GTCTC | 3 cut(s) | 318, 575, 619 |
| BcuI | ACTAGT | 1 cut(s) | 950 |
| BfmI | CTRYAG | 1 cut(s) | 552 |
| BglII | AGATCT | 1 cut(s) | 568 |
| BisI | GCNGC | 2 cut(s) | 85, 139 |
| BlpI | GCTNAGC | 2 cut(s) | 2386, 2427 |
| BlsI | GCNGC | 2 cut(s) | 86, 140 |
| Bme1390I | CCNGG | 3 cut(s) | 97, 438, 2077 |
| Bme18I | GGWCC | 2 cut(s) | 378, 681 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 376 |
| BmeT110I | CYCGRG | 2 cut(s) | 480, 2218 |
| BmgT120I | GGNCC | 2 cut(s) | 378, 681 |
| BmiI | GGNNCC | 7 cut(s) | 101, 682, 771, 840, 993, 1320, 2215 |
| BmrFI | CCNGG | 3 cut(s) | 97, 438, 2077 |
| BmrI | ACTGGG | 1 cut(s) | 1721 |
| BmsI | GCATC | 9 cut(s) | 33, 244, 455, 877, 946, 1796, 1854, 2182, 2303 |
| BmuI | ACTGGG | 1 cut(s) | 1721 |
| BpiI | GAAGAC | 1 cut(s) | 221 |
| BpmI | CTGGAG | 1 cut(s) | 2384 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2386, 2427 |
| BpuMI | CCSGG | 1 cut(s) | 97 |
| BsaHI | GRCGYC | 1 cut(s) | 372 |
| BsaJI | CCNNGG | 5 cut(s) | 38, 301, 2076, 2217, 2433 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 96, 339, 881, 1400, 1634 |
| Bse118I | RCCGGY | 1 cut(s) | 1952 |
| Bse1I | ACTGG | 3 cut(s) | 684, 1170, 1716 |
| Bse3DI | GCAATG | 1 cut(s) | 733 |
| BseBI | CCWGG | 2 cut(s) | 438, 2077 |
| BseDI | CCNNGG | 5 cut(s) | 38, 301, 2076, 2217, 2433 |
| BseGI | GGATG | 7 cut(s) | 24, 797, 1348, 1582, 1816, 2173, 2470 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 96, 339, 881, 1400, 1634 |
| BseMI | GCAATG | 1 cut(s) | 733 |
| BseMII | CTCAG | 6 cut(s) | 273, 396, 471, 718, 2400, 2441 |
| BseNI | ACTGG | 3 cut(s) | 684, 1170, 1716 |
| BseRI | GAGGAG | 1 cut(s) | 692 |
| BseSI | GKGCMC | 1 cut(s) | 774 |
| BseXI | GCAGC | 1 cut(s) | 96 |
| BseYI | CCCAGC | 4 cut(s) | 1399, 1633, 2280, 2460 |
| Bsh1236I | CGCG | 2 cut(s) | 64, 1889 |
| BshFI | GGCC | 1 cut(s) | 1952 |
| BshNI | GGYRCC | 2 cut(s) | 769, 838 |
| BsiHKAI | GWGCWC | 2 cut(s) | 481, 1393 |
| BsiHKCI | CYCGRG | 2 cut(s) | 480, 2218 |
| BsiSI | CCGG | 2 cut(s) | 97, 1953 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 96, 339, 881, 1400, 1634 |
| BsmAI | GTCTC | 3 cut(s) | 318, 575, 619 |
| BsmI | GAATGC | 1 cut(s) | 230 |
| BsnI | GGCC | 1 cut(s) | 1952 |
| BsoBI | CYCGRG | 2 cut(s) | 480, 2218 |
| Bsp1286I | GDGCHC | 3 cut(s) | 481, 774, 1393 |
| Bsp143I | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2386, 2427 |
| Bsp19I | CCATGG | 1 cut(s) | 38 |
| BspACI | CCGC | 5 cut(s) | 62, 138, 1609, 1887, 2152 |
| BspANI | GGCC | 1 cut(s) | 1952 |
| BspCNI | CTCAG | 6 cut(s) | 274, 395, 470, 717, 2399, 2440 |
| BspFNI | CGCG | 2 cut(s) | 64, 1889 |
| BspLI | GGNNCC | 7 cut(s) | 101, 682, 771, 840, 993, 1320, 2215 |
| BspPI | GGATC | 5 cut(s) | 40, 469, 709, 867, 2232 |
| BspQI | GCTCTTC | 2 cut(s) | 1374, 1797 |
| BspT107I | GGYRCC | 2 cut(s) | 769, 838 |
| BsrDI | GCAATG | 1 cut(s) | 733 |
| BsrFI | RCCGGY | 1 cut(s) | 1952 |
| BsrI | ACTGG | 3 cut(s) | 684, 1170, 1716 |
| BssAI | RCCGGY | 1 cut(s) | 1952 |
| BssECI | CCNNGG | 5 cut(s) | 38, 301, 2076, 2217, 2433 |
| BssMI | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| BssNI | GRCGYC | 1 cut(s) | 372 |
| BssSI | CACGAG | 1 cut(s) | 721 |
| BssT1I | CCWWGG | 2 cut(s) | 38, 2433 |
| Bst2BI | CACGAG | 1 cut(s) | 721 |
| Bst2UI | CCWGG | 2 cut(s) | 438, 2077 |
| Bst4CI | ACNGT | 3 cut(s) | 329, 985, 1983 |
| Bst6I | CTCTTC | 6 cut(s) | 573, 617, 1138, 1374, 1797, 1840 |
| BstACI | GRCGYC | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 4 cut(s) | 259, 599, 603, 1945 |
| BstDEI | CTNAG | 6 cut(s) | 282, 382, 457, 704, 2386, 2427 |
| BstDSI | CCRYGG | 1 cut(s) | 38 |
| BstF5I | GGATG | 7 cut(s) | 24, 797, 1348, 1582, 1816, 2173, 2470 |
| BstFNI | CGCG | 2 cut(s) | 64, 1889 |
| BstHHI | GCGC | 1 cut(s) | 1859 |
| BstKTI | GATC | 8 cut(s) | 48, 464, 571, 717, 862, 917, 2032, 2227 |
| BstMAI | GTCTC | 3 cut(s) | 318, 575, 619 |
| BstMBI | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1615, 1949 |
| BstNI | CCWGG | 2 cut(s) | 438, 2077 |
| BstNSI | RCATGY | 3 cut(s) | 605, 1947, 2244 |
| BstSCI | CCNGG | 3 cut(s) | 95, 436, 2075 |
| BstSFI | CTRYAG | 1 cut(s) | 552 |
| BstSLI | GKGCMC | 1 cut(s) | 774 |
| BstUI | CGCG | 2 cut(s) | 64, 1889 |
| BstV1I | GCAGC | 1 cut(s) | 96 |
| BstV2I | GAAGAC | 1 cut(s) | 221 |
| BstX2I | RGATCY | 3 cut(s) | 45, 568, 859 |
| BstYI | RGATCY | 3 cut(s) | 45, 568, 859 |
| BsuRI | GGCC | 1 cut(s) | 1952 |
| BtgI | CCRYGG | 1 cut(s) | 38 |
| BtgZI | GCGATG | 1 cut(s) | 2310 |
| BtsCI | GGATG | 7 cut(s) | 24, 797, 1348, 1582, 1816, 2173, 2470 |
| BtsI | GCAGTG | 1 cut(s) | 448 |
| BtsIMutI | CAGTG | 4 cut(s) | 390, 448, 990, 1988 |
| Cac8I | GCNNGC | 4 cut(s) | 259, 599, 603, 1945 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1235 |
| CfoI | GCGC | 1 cut(s) | 1859 |
| Cfr10I | RCCGGY | 1 cut(s) | 1952 |
| Cfr13I | GGNCC | 2 cut(s) | 378, 681 |
| Csp6I | GTAC | 4 cut(s) | 298, 1254, 1719, 1923 |
| CviQI | GTAC | 4 cut(s) | 298, 1254, 1719, 1923 |
| DdeI | CTNAG | 6 cut(s) | 282, 382, 457, 704, 2386, 2427 |
| DpnI | GATC | 8 cut(s) | 47, 463, 570, 716, 861, 916, 2031, 2226 |
| DpnII | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| DraI | TTTAAA | 1 cut(s) | 1768 |
| DraIII | CACNNNGTG | 1 cut(s) | 987 |
| DriI | GACNNNNNGTC | 1 cut(s) | 376 |
| EaeI | YGGCCR | 1 cut(s) | 1950 |
| Eam1104I | CTCTTC | 6 cut(s) | 573, 617, 1138, 1374, 1797, 1840 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 376 |
| EarI | CTCTTC | 6 cut(s) | 573, 617, 1138, 1374, 1797, 1840 |
| EciI | GGCGGA | 1 cut(s) | 2167 |
| Ecl136II | GAGCTC | 1 cut(s) | 479 |
| Eco130I | CCWWGG | 2 cut(s) | 38, 2433 |
| Eco24I | GRGCYC | 1 cut(s) | 481 |
| Eco32I | GATATC | 2 cut(s) | 133, 2406 |
| Eco47I | GGWCC | 2 cut(s) | 378, 681 |
| Eco53kI | GAGCTC | 1 cut(s) | 479 |
| Eco88I | CYCGRG | 2 cut(s) | 480, 2218 |
| EcoICRI | GAGCTC | 1 cut(s) | 479 |
| EcoO109I | RGGNCCY | 1 cut(s) | 378 |
| EcoRII | CCWGG | 2 cut(s) | 436, 2075 |
| EcoRV | GATATC | 2 cut(s) | 133, 2406 |
| EcoT14I | CCWWGG | 2 cut(s) | 38, 2433 |
| EcoT22I | ATGCAT | 2 cut(s) | 232, 2054 |
| EcoT38I | GRGCYC | 1 cut(s) | 481 |
| ErhI | CCWWGG | 2 cut(s) | 38, 2433 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1837, 1869 |
| Fnu4HI | GCNGC | 2 cut(s) | 85, 139 |
| FokI | GGATG | 7 cut(s) | 11, 784, 1355, 1589, 1823, 2160, 2477 |
| FriOI | GRGCYC | 1 cut(s) | 481 |
| Fsp4HI | GCNGC | 2 cut(s) | 85, 139 |
| GlaI | GCGC | 1 cut(s) | 1858 |
| GluI | GCNGC | 2 cut(s) | 85, 139 |
| GsaI | CCCAGC | 4 cut(s) | 1403, 1637, 2284, 2464 |
| GsuI | CTGGAG | 1 cut(s) | 2384 |
| HaeIII | GGCC | 1 cut(s) | 1952 |
| HapII | CCGG | 2 cut(s) | 97, 1953 |
| HhaI | GCGC | 1 cut(s) | 1859 |
| Hin1I | GRCGYC | 1 cut(s) | 372 |
| Hin6I | GCGC | 1 cut(s) | 1857 |
| HinP1I | GCGC | 1 cut(s) | 1857 |
| HincII | GTYRAC | 2 cut(s) | 778, 2371 |
| HindII | GTYRAC | 2 cut(s) | 778, 2371 |
| HindIII | AAGCTT | 1 cut(s) | 850 |
| HpaII | CCGG | 2 cut(s) | 97, 1953 |
| HphI | GGTGA | 6 cut(s) | 51, 896, 1093, 2012, 2319, 2510 |
| Hpy166II | GTNNAC | 3 cut(s) | 778, 2371, 2377 |
| Hpy8I | GTNNAC | 3 cut(s) | 778, 2371, 2377 |
| Hpy99I | CGWCG | 3 cut(s) | 84, 371, 374 |
| HpyAV | CCTTC | 8 cut(s) | 66, 241, 1885, 1985, 2072, 2099, 2210, 2416 |
| HpyCH4III | ACNGT | 3 cut(s) | 329, 985, 1983 |
| HpyCH4IV | ACGT | 4 cut(s) | 372, 609, 1921, 2373 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1615, 1949 |
| HpyF3I | CTNAG | 6 cut(s) | 282, 382, 457, 704, 2386, 2427 |
| HpySE526I | ACGT | 4 cut(s) | 372, 609, 1921, 2373 |
| Hsp92I | GRCGYC | 1 cut(s) | 372 |
| HspAI | GCGC | 1 cut(s) | 1857 |
| Kzo9I | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| LguI | GCTCTTC | 2 cut(s) | 1374, 1797 |
| LmnI | GCTCC | 4 cut(s) | 40, 92, 941, 1396 |
| Lsp1109I | GCAGC | 1 cut(s) | 96 |
| LweI | GCATC | 9 cut(s) | 33, 244, 455, 877, 946, 1796, 1854, 2182, 2303 |
| MaeII | ACGT | 4 cut(s) | 372, 609, 1921, 2373 |
| MaeIII | GTNAC | 3 cut(s) | 400, 869, 1081 |
| MalI | GATC | 8 cut(s) | 47, 463, 570, 716, 861, 916, 2031, 2226 |
| MboI | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| MfeI | CAATTG | 2 cut(s) | 833, 2516 |
| MflI | RGATCY | 3 cut(s) | 45, 568, 859 |
| MhlI | GDGCHC | 3 cut(s) | 481, 774, 1393 |
| MmeI | TCCRAC | 4 cut(s) | 971, 1086, 1120, 1822 |
| Mph1103I | ATGCAT | 2 cut(s) | 232, 2054 |
| MroXI | GAANNNNTTC | 1 cut(s) | 310 |
| MseI | TTAA | 7 cut(s) | 744, 758, 1209, 1332, 1566, 1767, 2039 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1942, 1965, 2239 |
| MspA1I | CMGCKG | 2 cut(s) | 138, 1928 |
| MspI | CCGG | 2 cut(s) | 97, 1953 |
| MspR9I | CCNGG | 3 cut(s) | 97, 438, 2077 |
| MunI | CAATTG | 2 cut(s) | 833, 2516 |
| Mva1269I | GAATGC | 1 cut(s) | 230 |
| MvaI | CCWGG | 2 cut(s) | 438, 2077 |
| MvnI | CGCG | 2 cut(s) | 64, 1889 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1615, 1949 |
| NciI | CCSGG | 1 cut(s) | 97 |
| NcoI | CCATGG | 1 cut(s) | 38 |
| NdeII | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| NlaIV | GGNNCC | 7 cut(s) | 101, 682, 771, 840, 993, 1320, 2215 |
| NmeAIII | GCCGAG | 1 cut(s) | 345 |
| NmuCI | GTSAC | 3 cut(s) | 400, 869, 1081 |
| NsiI | ATGCAT | 2 cut(s) | 232, 2054 |
| NspI | RCATGY | 3 cut(s) | 605, 1947, 2244 |
| PaeI | GCATGC | 2 cut(s) | 605, 1947 |
| PaeR7I | CTCGAG | 1 cut(s) | 480 |
| PciI | ACATGT | 1 cut(s) | 2240 |
| PciSI | GCTCTTC | 2 cut(s) | 1374, 1797 |
| PctI | GAATGC | 1 cut(s) | 230 |
| PdmI | GAANNNNTTC | 1 cut(s) | 310 |
| PfeI | GAWTC | 9 cut(s) | 92, 163, 200, 748, 1043, 1277, 1511, 1751, 2192 |
| PflFI | GACNNNGTC | 2 cut(s) | 371, 1983 |
| PkrI | GCNGC | 2 cut(s) | 86, 140 |
| PpuMI | RGGWCCY | 1 cut(s) | 378 |
| PscI | ACATGT | 1 cut(s) | 2240 |
| Psp124BI | GAGCTC | 1 cut(s) | 481 |
| Psp1406I | AACGTT | 1 cut(s) | 609 |
| Psp5II | RGGWCCY | 1 cut(s) | 378 |
| Psp6I | CCWGG | 2 cut(s) | 436, 2075 |
| PspFI | CCCAGC | 4 cut(s) | 1399, 1633, 2280, 2460 |
| PspGI | CCWGG | 2 cut(s) | 436, 2075 |
| PspN4I | GGNNCC | 7 cut(s) | 101, 682, 771, 840, 993, 1320, 2215 |
| PspPI | GGNCC | 2 cut(s) | 378, 681 |
| PspPPI | RGGWCCY | 1 cut(s) | 378 |
| PspXI | VCTCGAGB | 1 cut(s) | 480 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1235 |
| PsuI | RGATCY | 3 cut(s) | 45, 568, 859 |
| PsyI | GACNNNGTC | 2 cut(s) | 371, 1983 |
| PvuII | CAGCTG | 1 cut(s) | 1928 |
| RsaI | GTAC | 4 cut(s) | 299, 1255, 1720, 1924 |
| RsaNI | GTAC | 4 cut(s) | 298, 1254, 1719, 1923 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1942, 1965, 2239 |
| SacI | GAGCTC | 1 cut(s) | 481 |
| SapI | GCTCTTC | 2 cut(s) | 1374, 1797 |
| SaqAI | TTAA | 7 cut(s) | 744, 758, 1209, 1332, 1566, 1767, 2039 |
| SatI | GCNGC | 2 cut(s) | 85, 139 |
| Sau3AI | GATC | 8 cut(s) | 45, 461, 568, 714, 859, 914, 2029, 2224 |
| Sau96I | GGNCC | 2 cut(s) | 378, 681 |
| ScrFI | CCNGG | 3 cut(s) | 97, 438, 2077 |
| SduI | GDGCHC | 3 cut(s) | 481, 774, 1393 |
| SfaNI | GCATC | 9 cut(s) | 33, 244, 455, 877, 946, 1796, 1854, 2182, 2303 |
| SfcI | CTRYAG | 1 cut(s) | 552 |
| Sfr274I | CTCGAG | 1 cut(s) | 480 |
| SinI | GGWCC | 2 cut(s) | 378, 681 |
| SlaI | CTCGAG | 1 cut(s) | 480 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1942, 1965, 2239 |
| SmlI | CTYRAG | 1 cut(s) | 480 |
| SmoI | CTYRAG | 1 cut(s) | 480 |
| SpeI | ACTAGT | 1 cut(s) | 950 |
| SphI | GCATGC | 2 cut(s) | 605, 1947 |
| SsiI | CCGC | 5 cut(s) | 62, 138, 1609, 1887, 2152 |
| SspI | AATATT | 1 cut(s) | 1835 |
| SstI | GAGCTC | 1 cut(s) | 481 |
| StyD4I | CCNGG | 3 cut(s) | 95, 436, 2075 |
| StyI | CCWWGG | 2 cut(s) | 38, 2433 |
| TaaI | ACNGT | 3 cut(s) | 329, 985, 1983 |
| TaiI | ACGT | 4 cut(s) | 375, 612, 1924, 2376 |
| TaqI | TCGA | 5 cut(s) | 168, 449, 481, 2071, 2412 |
| TatI | WGTACW | 1 cut(s) | 1253 |
| TauI | GCSGC | 1 cut(s) | 141 |
| TfiI | GAWTC | 9 cut(s) | 92, 163, 200, 748, 1043, 1277, 1511, 1751, 2192 |
| Tru1I | TTAA | 7 cut(s) | 744, 758, 1209, 1332, 1566, 1767, 2039 |
| Tru9I | TTAA | 7 cut(s) | 744, 758, 1209, 1332, 1566, 1767, 2039 |
| TscAI | CASTG | 4 cut(s) | 390, 448, 990, 1988 |
| TseFI | GTSAC | 3 cut(s) | 400, 869, 1081 |
| TseI | GCWGC | 1 cut(s) | 84 |
| Tsp45I | GTSAC | 3 cut(s) | 400, 869, 1081 |
| TspRI | CASTG | 4 cut(s) | 390, 448, 990, 1988 |
| Tth111I | GACNNNGTC | 2 cut(s) | 371, 1983 |
| VpaK11BI | GGWCC | 2 cut(s) | 378, 681 |
| XapI | RAATTY | 3 cut(s) | 11, 155, 1364 |
| XceI | RCATGY | 3 cut(s) | 605, 1947, 2244 |
| XhoI | CTCGAG | 1 cut(s) | 480 |
| XmnI | GAANNNNTTC | 1 cut(s) | 310 |
| ZraI | GACGTC | 1 cut(s) | 373 |
| Zsp2I | ATGCAT | 2 cut(s) | 232, 2054 |