Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0012895

Physical Location & Seq

Genomic Coordinates Forward (+)

49213689 .. 49217445

Gene Structure 3757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0341500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGCTGAAAATGGAGAGGTCGTTCCCGGAGGAGGTGCTGGAGCACGTGTTCTCGTTCCTGCAGTCGGACGGCGACCGGAACTCGATCTCGCTGGTGTGCAAGTCGTGGTACGAGATCGAGCGGTGGTGCAGGAGGAGGATATTCGTTGGGAACTGCTACGCTGTGAGCCCTATGATTTTGATCAGACGGTTCCCAGACGTTAGATCCATCACGCTCAAAGGCAAGCCTCACTTCGCCGACTTCAATCTGGTCCCGGAGGGCTGGGGTGGCTACGTGTATCCCTGGATCGCCGCCATGGCCAGTGCTTATCCGTGGCTCGAGGAGATCAGGCTCAAGAGGATGGTCGTCACCGACGAGAGCTTGGAGCTGATTGCCAAGTCTTTCAAGAATTTCAAGCTCCTCGTGCTTTCGTCCTGTGAGGGATTCAGTACCGATGGCCTTGCCTCCATTGCCGCTAATTGCAGGAATTTGCGGGAGTTGGACTTGCATGAGAGTGAAGTGGAGGACCTGAGTGGGCATTGGCTGAGCCATTTTCCTGATACCTACACATCACTCGTCTCCCTTAACATTGCATGCTTGGGCTCTGAGGTTAGTTTCTCTGCCCTCGAGCGCCTGGTGGGTAGGTGTCCCAACCTGAGGAGTCTCAGGCTCAACCGTGCAGTGCCCCTTGACAGGCTATCTAATCTACTTAACCGTGCGCCTCAGCTGGTTGAGTTGGGGACAGGGGCCTACTCAGCTGAATTGCGGTCTGATGTGTTGTCGAACTTATCAAGTGCCCTCTCGGCCTGCAAGGAACTCAAGAGCCTTTCTGGGTTTTGGGATGTGGTCCCAACTTATCTTCCAGCTGTGTATTCTATCTGCCCTGGGATAACATCACTGAATTTGAGCTATGCCATTATTCAAAGTCCTGACCTTATAAAGCTTGTCAGTCAATGCCCAAATTTGCAGCGCCTTTGGGTATTGGATTATATTGAAGATGTTGGCCTTGATGCCTTGGCGGCGTCTTGCAAGGATCTACGAGAGTTGAGGGTGTTTCCATCTGATCCGTTTGTGGCGGAAGCAAATGTGTCCTTGACAGAACGAGGCCTCATTTCTGTTTCTGAGGGCTGTCCAAAGCTACAGTCAGTTCTGTACTTCTGCCGACAAATGTCTAATGATGCATTGATGACCATTGCCAGGAATCAACCTAACTTTACTTGTTTTCGCCTTTGTATTATTGAGCCCCGAACTCCGGACTATCTCACGCATGAGCCACTTGATGTGGGTTTCGGGGCCATTGTTGAGCACTGCAAAGATCTCCGGCGCCTGTCTGTTTCTGGTCTGTTAACTGATCGCGCATTTGAGTACATTGGTACTTATGGCAAAAGGTTGGAGATGCTTTCGCTAGCCTTTGCTGGAGATTCTGACCTGGGACTTCATCATGTGCTATCGGGGTGTGATAATCTTCGGAAACTTGAGATTAGGGACTGTCCTTTTGGTGACAAGGCTCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCTTCTTGCTCAGTGAGTTATGGAGCATGTAAGCTGCTAGGTCAGAAGTTGCCCCGGCTTAATGTGGAAGTTATTGACGAGAGGGGACACCCAGAATCGAGGCCGGAGAGCTGTCCTGTTGAGAAGCTCTATATATACAGGTCTGTTGCTGGTCCAAGGTTTGACATGCCTGGCTTTGTTTGGACCATGGATGAAAACTCTGCATTGAGGCTCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008175 GO:0008176 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016423 GO:0016740 GO:0016741 GO:0030488 GO:0032259 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0036265 GO:0043170 GO:0043412 GO:0043414 GO:0043527 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0106004 GO:0140098 GO:0140101 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_4

Protein Analysis

584

Amino Acids

65.58

Weight (kDa)

5.91

Isoelectric Point (pI)

50.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box_5	PF18511	7 - 45	4.7e-18	F-box
F-box-like	PF12937	9 - 39	5.5e-07	F-box-like
Transp_inhibit	PF18791	65 - 111	9.2e-27	Transport inhibitor response 1 protein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24840
fragaria_vesca	FvH4_2g36340
malus_domestica	MD08G1121000.v1.1 MD15G1100000.v1.1
prunus_persica	Prupe.1G454800_v2.0.a1
pyrus_communis	pycom08g10110 pycom15g09200
rosa_chinensis	RchiOBHm_Chr6g0305541
rosa_laevigata	RLG00000010878
rosa_multiflora	Rmu_co8330221.1_g000001 Rmu_sc0000841.1_g000004
rosa_roxburghii	Rroxscaffold_7G00162600
rosa_rugosa	Rorug06G0341500
rosa_samantha	Rh6AG453500 Rh6BG448100 Rh6CG467300 Rh6DG453900
rosa_wichuraiana	Rw6G039520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	917
AccB1I	GGYRCC	1 cut(s)	1302
AccBSI	CCGCTC	1 cut(s)	121
AccII	CGCG	1 cut(s)	1335
AccIII	TCCGGA	1 cut(s)	1231
AciI	CCGC	7 cut(s)	121, 291, 453, 472, 745, 998, 1055
AclWI	GGATC	5 cut(s)	198, 293, 1020, 1037, 1518
AcoI	YGGCCR	2 cut(s)	297, 1494
AcsI	RAATTY	4 cut(s)	388, 466, 880, 940
AcvI	CACGTG	1 cut(s)	46
AcyI	GRCGYC	2 cut(s)	1001, 1303
AfaI	GTAC	5 cut(s)	110, 430, 1133, 1346, 1354
AfiI	CCNNNNNNNGG	6 cut(s)	31, 64, 636, 672, 1176, 1231
AflIII	ACRYGT	2 cut(s)	45, 273
AgsI	TTSAA	5 cut(s)	244, 385, 394, 902, 974
AjnI	CCWGG	6 cut(s)	281, 612, 862, 1175, 1407, 1705
AloI	GAACNNNNNNTCC	3 cut(s)	32, 37, 64
Alw21I	GWGCWC	2 cut(s)	45, 1287
Alw26I	GTCTC	3 cut(s)	562, 647, 1508
AlwI	GGATC	5 cut(s)	198, 293, 1020, 1037, 1518
Ama87I	CYCGRG	2 cut(s)	317, 605
Aor13HI	TCCGGA	1 cut(s)	1231
AoxI	GGCC	9 cut(s)	297, 436, 726, 783, 982, 1084, 1272, 1494, 1637
ApeKI	GCWGC	3 cut(s)	946, 1502, 1570
ApoI	RAATTY	4 cut(s)	388, 466, 880, 940
ArsI	GACNNNNNNTTYG	4 cut(s)	1106, 1138, 1457, 1489
AspLEI	GCGC	5 cut(s)	612, 700, 951, 1305, 1337
AspS9I	GGNCC	7 cut(s)	250, 505, 726, 826, 1272, 1688, 1719
AsuC2I	CCSGG	3 cut(s)	26, 254, 1591
AsuHPI	GGTGA	2 cut(s)	340, 1490
AsuNHI	GCTAGC	1 cut(s)	1384
AvaI	CYCGRG	2 cut(s)	317, 605
AvaII	GGWCC	5 cut(s)	250, 505, 826, 1688, 1719
AxyI	CCTNAGG	1 cut(s)	635
BaeGI	GKGCMC	2 cut(s)	666, 778
BalI	TGGCCA	2 cut(s)	299, 1496
BanI	GGYRCC	1 cut(s)	1302
BanII	GRGCYC	3 cut(s)	170, 584, 1224
BauI	CACGAG	1 cut(s)	401
BbrPI	CACGTG	1 cut(s)	46
BbsI	GAAGAC	1 cut(s)	1530
Bbv12I	GWGCWC	2 cut(s)	45, 1287
BbvCI	CCTCAGC	1 cut(s)	702
BbvI	GCAGC	3 cut(s)	958, 1489, 1557
BccI	CCATC	4 cut(s)	215, 334, 428, 1045
BceAI	ACGGC	1 cut(s)	85
BcgI	CGANNNNNNTGC	2 cut(s)	422, 456
BciT130I	CCWGG	6 cut(s)	283, 614, 864, 1177, 1409, 1707
BciVI	GTATCC	1 cut(s)	288
BclI	TGATCA	1 cut(s)	180
BcnI	CCSGG	3 cut(s)	26, 254, 1591
BcoDI	GTCTC	3 cut(s)	562, 647, 1508
BfaI	CTAG	2 cut(s)	1385, 1574
BfmI	CTRYAG	2 cut(s)	59, 1118
BfoI	RGCGCY	3 cut(s)	613, 952, 1306
BfuI	GTATCC	1 cut(s)	288
BglI	GCCNNNNNGGC	3 cut(s)	296, 782, 998
BglII	AGATCT	1 cut(s)	1294
BisI	GCNGC	6 cut(s)	291, 453, 947, 999, 1503, 1571
BlpI	GCTNAGC	1 cut(s)	524
BlsI	GCNGC	6 cut(s)	292, 454, 948, 1000, 1504, 1572
Bme1390I	CCNGG	9 cut(s)	26, 254, 283, 614, 864, 1177, 1409, 1591, 1707
Bme18I	GGWCC	5 cut(s)	250, 505, 826, 1688, 1719
BmeT110I	CYCGRG	2 cut(s)	317, 605
BmgT120I	GGNCC	7 cut(s)	250, 505, 726, 826, 1272, 1688, 1719
BmiI	GGNNCC	6 cut(s)	191, 252, 727, 828, 1273, 1304
BmrFI	CCNGG	9 cut(s)	26, 254, 283, 614, 864, 1177, 1409, 1591, 1707
BmsI	GCATC	3 cut(s)	979, 1147, 1365
BmtI	GCTAGC	1 cut(s)	1388
BoxI	GACNNNNGTC	1 cut(s)	1147
BpiI	GAAGAC	1 cut(s)	1530
BpmI	CTGGAG	3 cut(s)	59, 1416, 1532
Bpu10I	CCTNAGC	1 cut(s)	702
Bpu1102I	GCTNAGC	1 cut(s)	524
BpuEI	CTTGAG	3 cut(s)	317, 782, 1475
BpuMI	CCSGG	3 cut(s)	26, 254, 1591
BsaAI	YACGTR	2 cut(s)	46, 274
BsaBI	GATNNNNATC	1 cut(s)	179
BsaHI	GRCGYC	2 cut(s)	1001, 1303
BsaWI	WCCGGW	2 cut(s)	75, 1231
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 32, 35, 62
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 64, 636, 672, 1176, 1231
Bse1I	ACTGG	1 cut(s)	300
Bse21I	CCTNAGG	1 cut(s)	635
Bse3DI	GCAATG	3 cut(s)	447, 567, 1170
Bse8I	GATNNNNATC	1 cut(s)	179
BseAI	TCCGGA	1 cut(s)	1231
BseBI	CCWGG	6 cut(s)	283, 614, 864, 1177, 1409, 1707
BseGI	GGATG	4 cut(s)	345, 826, 1539, 1732
BseJI	GATNNNNATC	1 cut(s)	179
BseLI	CCNNNNNNNGG	6 cut(s)	31, 64, 636, 672, 1176, 1231
BseMI	GCAATG	3 cut(s)	447, 567, 1170
BseMII	CTCAG	9 cut(s)	500, 515, 576, 626, 658, 716, 747, 1092, 1560
BseNI	ACTGG	1 cut(s)	300
BseRI	GAGGAG	5 cut(s)	44, 148, 335, 389, 652
BseSI	GKGCMC	2 cut(s)	666, 778
BseXI	GCAGC	3 cut(s)	958, 1489, 1557
BseYI	CCCAGC	1 cut(s)	261
BsgI	GTGCAG	2 cut(s)	148, 678
Bsh1236I	CGCG	1 cut(s)	1335
Bsh1285I	CGRYCG	1 cut(s)	76
BshFI	GGCC	9 cut(s)	299, 438, 728, 785, 984, 1086, 1274, 1496, 1639
BshNI	GGYRCC	1 cut(s)	1302
BsiEI	CGRYCG	1 cut(s)	76
BsiHKAI	GWGCWC	2 cut(s)	45, 1287
BsiHKCI	CYCGRG	2 cut(s)	317, 605
BsiSI	CCGG	7 cut(s)	26, 76, 254, 1232, 1300, 1591, 1640
BslFI	GGGAC	7 cut(s)	236, 612, 733, 812, 1425, 1478, 1635
BslI	CCNNNNNNNGG	6 cut(s)	31, 64, 636, 672, 1176, 1231
BsmAI	GTCTC	3 cut(s)	562, 647, 1508
BsmBI	CGTCTC	1 cut(s)	562
BsmFI	GGGAC	7 cut(s)	236, 612, 733, 812, 1425, 1478, 1635
BsnI	GGCC	9 cut(s)	299, 438, 728, 785, 984, 1086, 1274, 1496, 1639
BsoBI	CYCGRG	2 cut(s)	317, 605
Bsp1286I	GDGCHC	7 cut(s)	45, 170, 584, 666, 778, 1224, 1287
Bsp13I	TCCGGA	1 cut(s)	1231
Bsp1720I	GCTNAGC	1 cut(s)	524
Bsp19I	CCATGG	2 cut(s)	294, 1722
BspACI	CCGC	7 cut(s)	121, 291, 453, 472, 745, 998, 1055
BspANI	GGCC	9 cut(s)	299, 438, 728, 785, 984, 1086, 1274, 1496, 1639
BspCNI	CTCAG	9 cut(s)	501, 516, 577, 627, 657, 715, 746, 1093, 1559
BspEI	TCCGGA	1 cut(s)	1231
BspFNI	CGCG	1 cut(s)	1335
BspLI	GGNNCC	6 cut(s)	191, 252, 727, 828, 1273, 1304
BspMAI	CTGCAG	1 cut(s)	63
BspOI	GCTAGC	1 cut(s)	1388
BspPI	GGATC	5 cut(s)	198, 293, 1020, 1037, 1518
BspT107I	GGYRCC	1 cut(s)	1302
BsrBI	CCGCTC	1 cut(s)	121
BsrDI	GCAATG	3 cut(s)	447, 567, 1170
BsrI	ACTGG	1 cut(s)	300
BssNI	GRCGYC	2 cut(s)	1001, 1303
BssSI	CACGAG	1 cut(s)	401
BssT1I	CCWWGG	4 cut(s)	294, 993, 1691, 1722
Bst2BI	CACGAG	1 cut(s)	401
Bst2UI	CCWGG	6 cut(s)	283, 614, 864, 1177, 1409, 1707
Bst4CI	ACNGT	5 cut(s)	189, 656, 695, 1122, 1469
BstACI	GRCGYC	2 cut(s)	1001, 1303
BstBAI	YACGTR	2 cut(s)	46, 274
BstC8I	GCNNGC	4 cut(s)	224, 574, 787, 1386
BstDEI	CTNAG	9 cut(s)	509, 524, 585, 635, 644, 702, 733, 1101, 1546
BstDSI	CCRYGG	3 cut(s)	294, 311, 1722
BstF5I	GGATG	4 cut(s)	345, 826, 1539, 1732
BstFNI	CGCG	1 cut(s)	1335
BstH2I	RGCGCY	3 cut(s)	613, 952, 1306
BstHHI	GCGC	5 cut(s)	612, 700, 951, 1305, 1337
BstMAI	GTCTC	3 cut(s)	562, 647, 1508
BstMCI	CGRYCG	1 cut(s)	76
BstMWI	GCNNNNNNNGC	9 cut(s)	267, 296, 403, 449, 734, 782, 998, 1493, 1502
BstNI	CCWGG	6 cut(s)	283, 614, 864, 1177, 1409, 1707
BstNSI	RCATGY	3 cut(s)	576, 1566, 1705
BstPAI	GACNNNNGTC	1 cut(s)	1147
BstSCI	CCNGG	9 cut(s)	24, 252, 281, 612, 862, 1175, 1407, 1589, 1705
BstSFI	CTRYAG	2 cut(s)	59, 1118
BstSLI	GKGCMC	2 cut(s)	666, 778
BstUI	CGCG	1 cut(s)	1335
BstV1I	GCAGC	3 cut(s)	958, 1489, 1557
BstV2I	GAAGAC	1 cut(s)	1530
BstX2I	RGATCY	3 cut(s)	203, 1012, 1294
BstYI	RGATCY	3 cut(s)	203, 1012, 1294
Bsu36I	CCTNAGG	1 cut(s)	635
BsuI	GTATCC	1 cut(s)	288
BsuRI	GGCC	9 cut(s)	299, 438, 728, 785, 984, 1086, 1274, 1496, 1639
BtgI	CCRYGG	3 cut(s)	294, 311, 1722
BtsCI	GGATG	4 cut(s)	345, 826, 1539, 1732
BtsI	GCAGTG	2 cut(s)	666, 1285
BtsIMutI	CAGTG	5 cut(s)	307, 666, 875, 1285, 1554
Cac8I	GCNNGC	4 cut(s)	224, 574, 787, 1386
CfoI	GCGC	5 cut(s)	612, 700, 951, 1305, 1337
Cfr13I	GGNCC	7 cut(s)	250, 505, 726, 826, 1272, 1688, 1719
CseI	GACGC	1 cut(s)	990
Csp6I	GTAC	5 cut(s)	109, 429, 1132, 1345, 1353
CviAII	CATG	8 cut(s)	295, 488, 573, 1247, 1421, 1563, 1702, 1723
CviQI	GTAC	5 cut(s)	109, 429, 1132, 1345, 1353
DdeI	CTNAG	9 cut(s)	509, 524, 585, 635, 644, 702, 733, 1101, 1546
DinI	GGCGCC	1 cut(s)	1304
EaeI	YGGCCR	2 cut(s)	297, 1494
EciI	GGCGGA	1 cut(s)	1070
Eco130I	CCWWGG	4 cut(s)	294, 993, 1691, 1722
Eco147I	AGGCCT	1 cut(s)	1086
Eco24I	GRGCYC	3 cut(s)	170, 584, 1224
Eco47I	GGWCC	5 cut(s)	250, 505, 826, 1688, 1719
Eco72I	CACGTG	1 cut(s)	46
Eco81I	CCTNAGG	1 cut(s)	635
Eco88I	CYCGRG	2 cut(s)	317, 605
EcoO109I	RGGNCCY	2 cut(s)	505, 726
EcoRII	CCWGG	6 cut(s)	281, 612, 862, 1175, 1407, 1705
EcoT14I	CCWWGG	4 cut(s)	294, 993, 1691, 1722
EcoT22I	ATGCAT	1 cut(s)	1162
EcoT38I	GRGCYC	3 cut(s)	170, 584, 1224
EgeI	GGCGCC	1 cut(s)	1304
EheI	GGCGCC	1 cut(s)	1304
ErhI	CCWWGG	4 cut(s)	294, 993, 1691, 1722
Esp3I	CGTCTC	1 cut(s)	562
FaeI	CATG	8 cut(s)	298, 491, 576, 1250, 1424, 1566, 1705, 1726
FalI	AAGNNNNNCTT	2 cut(s)	215, 247
FaqI	GGGAC	7 cut(s)	236, 612, 733, 812, 1425, 1478, 1635
FatI	CATG	8 cut(s)	294, 487, 572, 1246, 1420, 1562, 1701, 1722
FauI	CCCGC	1 cut(s)	465
FbaI	TGATCA	1 cut(s)	180
Fnu4HI	GCNGC	6 cut(s)	291, 453, 947, 999, 1503, 1571
FokI	GGATG	4 cut(s)	352, 833, 1546, 1739
FriOI	GRGCYC	3 cut(s)	170, 584, 1224
Fsp4HI	GCNGC	6 cut(s)	291, 453, 947, 999, 1503, 1571
FspBI	CTAG	2 cut(s)	1385, 1574
GlaI	GCGC	5 cut(s)	611, 699, 950, 1304, 1336
GluI	GCNGC	6 cut(s)	291, 453, 947, 999, 1503, 1571
GsaI	CCCAGC	1 cut(s)	265
GsuI	CTGGAG	3 cut(s)	59, 1416, 1532
HaeII	RGCGCY	3 cut(s)	613, 952, 1306
HaeIII	GGCC	9 cut(s)	299, 438, 728, 785, 984, 1086, 1274, 1496, 1639
HapII	CCGG	7 cut(s)	26, 76, 254, 1232, 1300, 1591, 1640
HgaI	GACGC	1 cut(s)	990
HhaI	GCGC	5 cut(s)	612, 700, 951, 1305, 1337
Hin1I	GRCGYC	2 cut(s)	1001, 1303
Hin1II	CATG	8 cut(s)	298, 491, 576, 1250, 1424, 1566, 1705, 1726
Hin6I	GCGC	5 cut(s)	610, 698, 949, 1303, 1335
HinP1I	GCGC	5 cut(s)	610, 698, 949, 1303, 1335
HincII	GTYRAC	1 cut(s)	1326
HindII	GTYRAC	1 cut(s)	1326
HindIII	AAGCTT	1 cut(s)	920
HinfI	GANTC	5 cut(s)	423, 640, 1180, 1400, 1631
HpaI	GTTAAC	1 cut(s)	1326
HpaII	CCGG	7 cut(s)	26, 76, 254, 1232, 1300, 1591, 1640
HphI	GGTGA	2 cut(s)	340, 1490
Hpy166II	GTNNAC	1 cut(s)	1326
Hpy188I	TCNGA	9 cut(s)	67, 185, 586, 751, 1042, 1102, 1405, 1449, 1581
Hpy188III	TCNNGA	6 cut(s)	334, 385, 536, 799, 908, 1232
Hpy8I	GTNNAC	1 cut(s)	1326
Hpy99I	CGWCG	1 cut(s)	356
HpyCH4III	ACNGT	5 cut(s)	189, 656, 695, 1122, 1469
HpyCH4IV	ACGT	3 cut(s)	45, 198, 273
HpyF10VI	GCNNNNNNNGC	9 cut(s)	267, 296, 403, 449, 734, 782, 998, 1493, 1502
HpyF3I	CTNAG	9 cut(s)	509, 524, 585, 635, 644, 702, 733, 1101, 1546
HpySE526I	ACGT	3 cut(s)	45, 198, 273
Hsp92I	GRCGYC	2 cut(s)	1001, 1303
Hsp92II	CATG	8 cut(s)	298, 491, 576, 1250, 1424, 1566, 1705, 1726
HspAI	GCGC	5 cut(s)	610, 698, 949, 1303, 1335
KasI	GGCGCC	1 cut(s)	1302
Kpn2I	TCCGGA	1 cut(s)	1231
Ksp22I	TGATCA	1 cut(s)	180
KspAI	GTTAAC	1 cut(s)	1326
LmnI	GCTCC	4 cut(s)	40, 364, 402, 1559
Lsp1109I	GCAGC	3 cut(s)	958, 1489, 1557
LweI	GCATC	3 cut(s)	979, 1147, 1365
MaeI	CTAG	2 cut(s)	1385, 1574
MaeII	ACGT	3 cut(s)	45, 198, 273
MaeIII	GTNAC	2 cut(s)	346, 1478
MbiI	CCGCTC	1 cut(s)	121
MboII	GAAGA	4 cut(s)	830, 986, 1436, 1530
MflI	RGATCY	3 cut(s)	203, 1012, 1294
MhlI	GDGCHC	7 cut(s)	45, 170, 584, 666, 778, 1224, 1287
MlsI	TGGCCA	2 cut(s)	299, 1496
MluCI	AATT	6 cut(s)	388, 457, 466, 740, 880, 940
MluNI	TGGCCA	2 cut(s)	299, 1496
Mly113I	GGCGCC	1 cut(s)	1303
MlyI	GAGTC	1 cut(s)	649
MmeI	TCCRAC	3 cut(s)	45, 459, 1350
Mox20I	TGGCCA	2 cut(s)	299, 1496
Mph1103I	ATGCAT	1 cut(s)	1162
MroI	TCCGGA	1 cut(s)	1231
MscI	TGGCCA	2 cut(s)	299, 1496
MseI	TTAA	4 cut(s)	564, 690, 1325, 1596
MslI	CAYNNNNRTG	1 cut(s)	492
Msp20I	TGGCCA	2 cut(s)	299, 1496
MspA1I	CMGCKG	3 cut(s)	706, 737, 845
MspI	CCGG	7 cut(s)	26, 76, 254, 1232, 1300, 1591, 1640
MspR9I	CCNGG	9 cut(s)	26, 254, 283, 614, 864, 1177, 1409, 1591, 1707
MvaI	CCWGG	6 cut(s)	283, 614, 864, 1177, 1409, 1707
MvnI	CGCG	1 cut(s)	1335
MwoI	GCNNNNNNNGC	9 cut(s)	267, 296, 403, 449, 734, 782, 998, 1493, 1502
NarI	GGCGCC	1 cut(s)	1303
NciI	CCSGG	3 cut(s)	26, 254, 1591
NcoI	CCATGG	2 cut(s)	294, 1722
NheI	GCTAGC	1 cut(s)	1384
NlaIII	CATG	8 cut(s)	298, 491, 576, 1250, 1424, 1566, 1705, 1726
NlaIV	GGNNCC	6 cut(s)	191, 252, 727, 828, 1273, 1304
NmeAIII	GCCGAG	1 cut(s)	761
NmuCI	GTSAC	2 cut(s)	346, 1478
NsiI	ATGCAT	1 cut(s)	1162
NspI	RCATGY	3 cut(s)	576, 1566, 1705
PaeI	GCATGC	1 cut(s)	576
PaeR7I	CTCGAG	2 cut(s)	317, 605
PasI	CCCWGGG	1 cut(s)	863
PceI	AGGCCT	1 cut(s)	1086
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PfeI	GAWTC	4 cut(s)	423, 1180, 1400, 1631
PfoI	TCCNGGA	2 cut(s)	24, 252
PkrI	GCNGC	6 cut(s)	292, 454, 948, 1000, 1504, 1572
PleI	GAGTC	1 cut(s)	648
PluTI	GGCGCC	1 cut(s)	1306
PmaCI	CACGTG	1 cut(s)	46
PmlI	CACGTG	1 cut(s)	46
PpsI	GAGTC	1 cut(s)	648
Ppu21I	YACGTR	2 cut(s)	46, 274
PpuMI	RGGWCCY	1 cut(s)	505
PshAI	GACNNNNGTC	1 cut(s)	1147
PsiI	TTATAA	1 cut(s)	917
Psp5II	RGGWCCY	1 cut(s)	505
Psp6I	CCWGG	6 cut(s)	281, 612, 862, 1175, 1407, 1705
PspCI	CACGTG	1 cut(s)	46
PspFI	CCCAGC	1 cut(s)	261
PspGI	CCWGG	6 cut(s)	281, 612, 862, 1175, 1407, 1705
PspN4I	GGNNCC	6 cut(s)	191, 252, 727, 828, 1273, 1304
PspPI	GGNCC	7 cut(s)	250, 505, 726, 826, 1272, 1688, 1719
PspPPI	RGGWCCY	1 cut(s)	505
PspXI	VCTCGAGB	2 cut(s)	317, 605
PstI	CTGCAG	1 cut(s)	63
PsuI	RGATCY	3 cut(s)	203, 1012, 1294
PvuII	CAGCTG	3 cut(s)	706, 737, 845
RsaI	GTAC	5 cut(s)	110, 430, 1133, 1346, 1354
RsaNI	GTAC	5 cut(s)	109, 429, 1132, 1345, 1353
RseI	CAYNNNNRTG	1 cut(s)	492
SaqAI	TTAA	4 cut(s)	564, 690, 1325, 1596
SatI	GCNGC	6 cut(s)	291, 453, 947, 999, 1503, 1571
Sau96I	GGNCC	7 cut(s)	250, 505, 726, 826, 1272, 1688, 1719
SchI	GAGTC	1 cut(s)	649
ScrFI	CCNGG	9 cut(s)	26, 254, 283, 614, 864, 1177, 1409, 1591, 1707
SduI	GDGCHC	7 cut(s)	45, 170, 584, 666, 778, 1224, 1287
SfaNI	GCATC	3 cut(s)	979, 1147, 1365
SfcI	CTRYAG	2 cut(s)	59, 1118
SfoI	GGCGCC	1 cut(s)	1304
Sfr274I	CTCGAG	2 cut(s)	317, 605
SinI	GGWCC	5 cut(s)	250, 505, 826, 1688, 1719
SlaI	CTCGAG	2 cut(s)	317, 605
SmiMI	CAYNNNNRTG	1 cut(s)	492
SmlI	CTYRAG	5 cut(s)	317, 332, 605, 797, 1454
SmoI	CTYRAG	5 cut(s)	317, 332, 605, 797, 1454
SphI	GCATGC	1 cut(s)	576
Sse9I	AATT	6 cut(s)	388, 457, 466, 740, 880, 940
SseBI	AGGCCT	1 cut(s)	1086
SsiI	CCGC	7 cut(s)	121, 291, 453, 472, 745, 998, 1055
SspDI	GGCGCC	1 cut(s)	1302
SspMI	CTAG	2 cut(s)	1385, 1574
StuI	AGGCCT	1 cut(s)	1086
StyD4I	CCNGG	9 cut(s)	24, 252, 281, 612, 862, 1175, 1407, 1589, 1705
StyI	CCWWGG	4 cut(s)	294, 993, 1691, 1722
TaaI	ACNGT	5 cut(s)	189, 656, 695, 1122, 1469
TaiI	ACGT	3 cut(s)	48, 201, 276
TaqI	TCGA	6 cut(s)	83, 117, 318, 606, 761, 1634
TasI	AATT	6 cut(s)	388, 457, 466, 740, 880, 940
TatI	WGTACW	2 cut(s)	1131, 1344
TauI	GCSGC	3 cut(s)	293, 455, 1001
TfiI	GAWTC	4 cut(s)	423, 1180, 1400, 1631
Tru1I	TTAA	4 cut(s)	564, 690, 1325, 1596
Tru9I	TTAA	4 cut(s)	564, 690, 1325, 1596
TscAI	CASTG	5 cut(s)	307, 666, 882, 1292, 1554
TseFI	GTSAC	2 cut(s)	346, 1478
TseI	GCWGC	3 cut(s)	946, 1502, 1570
Tsp45I	GTSAC	2 cut(s)	346, 1478
TspDTI	ATGAA	2 cut(s)	1406, 1743
TspGWI	ACGGA	2 cut(s)	300, 1035
TspRI	CASTG	5 cut(s)	307, 666, 882, 1292, 1554
VpaK11BI	GGWCC	5 cut(s)	250, 505, 826, 1688, 1719
XapI	RAATTY	4 cut(s)	388, 466, 880, 940
XceI	RCATGY	3 cut(s)	576, 1566, 1705
XhoI	CTCGAG	2 cut(s)	317, 605
XspI	CTAG	2 cut(s)	1385, 1574
Zsp2I	ATGCAT	1 cut(s)	1162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.