Rorug06G0376600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0013622
Physical Location & Seq
Reverse (-)
52303244 .. 52305693
2450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0376600.1

Sequence Viewer

Length: 1578 bp
ATGATTCAATATGTTTTGGAAATGGATTCCGGAGAAAAGCGTCTCAATGAGCTTGGTTACAAGCAAGAACTCAGAAGGGAAATGACGTTGTTCAAGACACTTGCAATAACATTTTCATGCATGTCAGTGTTCACTGGGACACCTCTCTATGGCCAAAGCTTGCGTTATGCAGGTCCTGCAACTTTAATATGGGGATGGTTAGTTGTCACCTTCTTCACATGGTTTGTCGGAATAGCCATGGCTGAAATTTGTTCTTCTTTCCCGACCACAGGTTCTCTTTATTTCTGGGCTGCCCATTTGGCTGGACCCAGGTGGGGCCCATTTGCTTCATGGTGCTGTGCTTGGCTTGAGATAATTGGTCTGACAACTGCAATAGGCGCTCAGGCATATTCAGCAACACAAGCATTTCAAATGTTCATTCTTATAGCCACTGGGACAAACAAGGGTGGAGGCTATTTTGCTTCAAGGAGTGTCTTTGTGTGCATGTATATGGGCATAACCCTCATTTGGGCAGTACTAAACACTTTCGCTCTGCAATTCATAGCATTGCTTAACATAATCTCCATATGGTGGCAGGTGATTGGTGGTTTGCTTGTGATTATAATGCTGCCTCTGGTGGCACCGTCAACACAAACAGCTTCTTCTGTCTTCACTCATTTTGAAACATCTCCCGAGTCGACTGGGATATCTAGCGTACCTTATGCAGTGGTTTTGTCAGTGCTTCTGAGCAATTACTGTCTGTATGGATATGATGCTGCAGCTCATCTTACGGAAGAGACAAAAGGTGCAGATAAAACTGGACCTATAGCTATTCTCTCCAGTATTGGGATAATATCAGTGTTTGGTTGGGCTTATTACTTAGCTCTCACTTTCAGCATCCAGGATCTGGACTATTTATACAGTGCAGACAATGAGACTGCTGGTGTACTTGTACCAGCACAGATAATATATGATGCATTTTATGGAAGGTATCATAATTCCACTGGAGCTGTGATTTTCCTGTTTATTATCTGGGGTTCCTTCTTCTTTTGTGGGCTGTCTGTCACCACTACTGCTGCCCGAGTAGTTTATGCTGTATCAAGGGATGGATGTATGCCTTTTTCACCAGTGTGGAGAAAAGTAAACCCGAGGAACAAGGTTCCAACAAATGCTGTGTGGCTCTGCGCTGCCATCACTATGCTTCTCGGATTACCCATCTTGAAAATGGACATAGTATTCATAGCCATCCTTTCAATTAGCACCATTGGCTGGGTGGGAGGTTATGCTGTACCAATCTTTGCTAGGCTGGTGATGGCTGAAGAGAACTTCAAACCAGGACCCTATTATTTGGGTAGAGCAAGGCGGCCAGTTTGCTTGGTGGCTTTCCTCTGGATATGTTATACCTGTTCAGTCTTCCTATTGCCGACTTCTTACCCTATTCGATGGAAAACTTTCAATTATGCACCAGTGGCCCTGGGTGTTGTTTTGACACTAGTGATGGTCTGGTGGGCGTTGGATGCTAGGAAATGGTACAAAGGACCTGTAAGAAACATTGATGTACAAAATGGAAACAATCAGCATCCGCAGTCACACCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378

Protein Analysis

525

Amino Acids

58.29

Weight (kDa)

8.61

Isoelectric Point (pI)

43.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_permease_2 PF13520 30 - 487 2e-52 Amino acid permease
AA_permease PF00324 51 - 502 4.3e-22 Amino acid permease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013622)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32690
malus_domestica MD08G1078600.v1.1 MD15G1065400.v1.1
prunus_persica Prupe.1G419500_v2.0.a1
pyrus_communis pycom08g06500 pycom15g06190
rosa_chinensis RchiOBHm_Chr6g0309981
rosa_laevigata RLG00000010519
rosa_multiflora Rmu_sc0000294.1_g000010
rosa_roxburghii Rroxscaffold_7G00158980
rosa_rugosa Rorug06G0376500 Rorug06G0376600
rosa_samantha Rh6AG490300 Rh6BG499800 Rh6CG504600 Rh6CG504700 Rh6DG490700
rosa_wichuraiana Rw6G042680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 602
AarI CACCTGC 1 cut(s) 565
Acc36I ACCTGC 2 cut(s) 161, 565
AccB1I GGYRCC 1 cut(s) 619
AccB7I CCANNNNNTGG 3 cut(s) 570, 886, 1248
AccI GTMKAC 1 cut(s) 677
AccIII TCCGGA 1 cut(s) 29
AciI CCGC 2 cut(s) 1342, 1562
AclWI GGATC 1 cut(s) 891
AcoI YGGCCR 2 cut(s) 151, 1343
AcsI RAATTY 1 cut(s) 246
AcuI CTGAAG 1 cut(s) 1317
AfaI GTAC 7 cut(s) 516, 696, 927, 933, 1269, 1511, 1539
AfiI CCNNNNNNNGG 9 cut(s) 149, 269, 314, 507, 508, 570, 825, 886, 1248
AgsI TTSAA 9 cut(s) 8, 94, 410, 465, 662, 1201, 1233, 1309, 1435
AhlI ACTAGT 1 cut(s) 1471
AjnI CCWGG 4 cut(s) 308, 879, 1312, 1452
AleI CACNNNNGTG 1 cut(s) 1108
AluBI AGCT 7 cut(s) 52, 159, 638, 761, 809, 863, 989
AluI AGCT 7 cut(s) 52, 159, 638, 761, 809, 863, 989
Alw26I GTCTC 3 cut(s) 47, 770, 908
AlwI GGATC 1 cut(s) 891
AlwNI CAGNNNCTG 2 cut(s) 176, 886
Ama87I CYCGRG 3 cut(s) 671, 1059, 1126
Aor13HI TCCGGA 1 cut(s) 29
AoxI GGCC 4 cut(s) 151, 316, 1343, 1449
ApaI GGGCCC 1 cut(s) 320
ApeKI GCWGC 6 cut(s) 290, 607, 755, 758, 1055, 1166
ApoI RAATTY 1 cut(s) 246
Asp700I GAANNNNTTC 1 cut(s) 1430
AspLEI GCGC 2 cut(s) 380, 1166
AspS9I GGNCC 8 cut(s) 173, 305, 316, 317, 800, 1316, 1450, 1517
AsuHPI GGTGA 5 cut(s) 199, 589, 1036, 1095, 1300
AvaI CYCGRG 3 cut(s) 671, 1059, 1126
AvaII GGWCC 5 cut(s) 173, 305, 800, 1316, 1517
BaeGI GKGCMC 1 cut(s) 320
BalI TGGCCA 1 cut(s) 153
BanI GGYRCC 1 cut(s) 619
BanII GRGCYC 1 cut(s) 320
BbsI GAAGAC 2 cut(s) 640, 1384
BbvI GCAGC 6 cut(s) 277, 594, 742, 770, 1042, 1153
BccI CCATC 8 cut(s) 189, 1079, 1178, 1202, 1232, 1285, 1416, 1471
BciT130I CCWGG 4 cut(s) 310, 881, 1314, 1454
BcoDI GTCTC 3 cut(s) 47, 770, 908
BcuI ACTAGT 1 cut(s) 1471
BfaI CTAG 4 cut(s) 690, 1281, 1472, 1500
BfmI CTRYAG 2 cut(s) 756, 804
BfoI RGCGCY 1 cut(s) 381
BfuAI ACCTGC 2 cut(s) 161, 565
BglI GCCNNNNNGGC 1 cut(s) 299
BisI GCNGC 7 cut(s) 291, 608, 756, 759, 1056, 1167, 1343
BlsI GCNGC 7 cut(s) 292, 609, 757, 760, 1057, 1168, 1344
BmcAI AGTACT 1 cut(s) 516
Bme1390I CCNGG 4 cut(s) 310, 881, 1314, 1454
Bme18I GGWCC 5 cut(s) 173, 305, 800, 1316, 1517
BmeT110I CYCGRG 3 cut(s) 671, 1059, 1126
BmgT120I GGNCC 8 cut(s) 173, 305, 316, 317, 800, 1316, 1450, 1517
BmiI GGNNCC 7 cut(s) 307, 317, 318, 621, 1018, 1140, 1318
BmrFI CCNGG 4 cut(s) 310, 881, 1314, 1454
BmrI ACTGGG 3 cut(s) 144, 441, 690
BmsI GCATC 5 cut(s) 742, 885, 943, 1486, 1567
BmuI ACTGGG 3 cut(s) 144, 441, 690
BpiI GAAGAC 2 cut(s) 640, 1384
BpmI CTGGAG 2 cut(s) 802, 1005
Bpu10I CCTNAGC 1 cut(s) 381
BpuEI CTTGAG 1 cut(s) 368
BsaJI CCNNGG 5 cut(s) 237, 308, 1127, 1452, 1453
BsaWI WCCGGW 1 cut(s) 29
BsaXI ACNNNNNCTCC 2 cut(s) 545, 575
Bsc4I CCNNNNNNNGG 9 cut(s) 149, 269, 314, 507, 508, 570, 825, 886, 1248
Bse1I ACTGG 9 cut(s) 139, 436, 685, 802, 819, 988, 1106, 1346, 1445
Bse3DI GCAATG 1 cut(s) 545
BseAI TCCGGA 1 cut(s) 29
BseBI CCWGG 4 cut(s) 310, 881, 1314, 1454
BseDI CCNNGG 5 cut(s) 237, 308, 1127, 1452, 1453
BseGI GGATG 7 cut(s) 200, 876, 1090, 1094, 1224, 1501, 1558
BseLI CCNNNNNNNGG 9 cut(s) 149, 269, 314, 507, 508, 570, 825, 886, 1248
BseMI GCAATG 1 cut(s) 545
BseMII CTCAG 3 cut(s) 85, 395, 716
BseNI ACTGG 9 cut(s) 139, 436, 685, 802, 819, 988, 1106, 1346, 1445
BseSI GKGCMC 1 cut(s) 320
BseXI GCAGC 6 cut(s) 277, 594, 742, 770, 1042, 1153
BseYI CCCAGC 1 cut(s) 1248
BsgI GTGCAG 2 cut(s) 807, 924
BshFI GGCC 4 cut(s) 153, 318, 1345, 1451
BshNI GGYRCC 1 cut(s) 619
BsiHKCI CYCGRG 3 cut(s) 671, 1059, 1126
BsiSI CCGG 1 cut(s) 30
BslFI GGGAC 2 cut(s) 151, 448
BslI CCNNNNNNNGG 9 cut(s) 149, 269, 314, 507, 508, 570, 825, 886, 1248
BsmAI GTCTC 3 cut(s) 47, 770, 908
BsmBI CGTCTC 1 cut(s) 47
BsmFI GGGAC 2 cut(s) 151, 448
BsnI GGCC 4 cut(s) 153, 318, 1345, 1451
BsoBI CYCGRG 3 cut(s) 671, 1059, 1126
Bsp120I GGGCCC 1 cut(s) 316
Bsp1286I GDGCHC 1 cut(s) 320
Bsp13I TCCGGA 1 cut(s) 29
Bsp1407I TGTACA 1 cut(s) 1537
Bsp143I GATC 1 cut(s) 883
Bsp19I CCATGG 1 cut(s) 237
BspACI CCGC 2 cut(s) 1342, 1562
BspANI GGCC 4 cut(s) 153, 318, 1345, 1451
BspCNI CTCAG 3 cut(s) 84, 394, 717
BspEI TCCGGA 1 cut(s) 29
BspLI GGNNCC 7 cut(s) 307, 317, 318, 621, 1018, 1140, 1318
BspMAI CTGCAG 1 cut(s) 760
BspMI ACCTGC 2 cut(s) 161, 565
BspPI GGATC 1 cut(s) 891
BspT107I GGYRCC 1 cut(s) 619
BsrDI GCAATG 1 cut(s) 545
BsrGI TGTACA 1 cut(s) 1537
BsrI ACTGG 9 cut(s) 139, 436, 685, 802, 819, 988, 1106, 1346, 1445
BssECI CCNNGG 5 cut(s) 237, 308, 1127, 1452, 1453
BssMI GATC 1 cut(s) 883
BssT1I CCWWGG 1 cut(s) 237
Bst2UI CCWGG 4 cut(s) 310, 881, 1314, 1454
Bst4CI ACNGT 3 cut(s) 624, 737, 902
Bst6I CTCTTC 2 cut(s) 768, 1293
BstAPI GCANNNNNTGC 1 cut(s) 176
BstAUI TGTACA 1 cut(s) 1537
BstC8I GCNNGC 1 cut(s) 161
BstDEI CTNAG 4 cut(s) 71, 381, 725, 859
BstDSI CCRYGG 1 cut(s) 237
BstF5I GGATG 7 cut(s) 200, 876, 1090, 1094, 1224, 1501, 1558
BstH2I RGCGCY 1 cut(s) 381
BstHHI GCGC 2 cut(s) 380, 1166
BstKTI GATC 1 cut(s) 886
BstMAI GTCTC 3 cut(s) 47, 770, 908
BstMBI GATC 1 cut(s) 883
BstMWI GCNNNNNNNGC 8 cut(s) 176, 299, 377, 392, 401, 1245, 1448, 1496
BstNI CCWGG 4 cut(s) 310, 881, 1314, 1454
BstNSI RCATGY 2 cut(s) 124, 487
BstSCI CCNGG 4 cut(s) 308, 879, 1312, 1452
BstSFI CTRYAG 2 cut(s) 756, 804
BstSLI GKGCMC 1 cut(s) 320
BstV1I GCAGC 6 cut(s) 277, 594, 742, 770, 1042, 1153
BstV2I GAAGAC 2 cut(s) 640, 1384
BstX2I RGATCY 1 cut(s) 883
BstXI CCANNNNNNTGG 1 cut(s) 302
BstYI RGATCY 1 cut(s) 883
BsuRI GGCC 4 cut(s) 153, 318, 1345, 1451
BtgI CCRYGG 1 cut(s) 237
BtsCI GGATG 7 cut(s) 200, 876, 1090, 1094, 1224, 1501, 1558
BtsI GCAGTG 1 cut(s) 711
BveI ACCTGC 2 cut(s) 161, 565
Cac8I GCNNGC 1 cut(s) 161
CaiI CAGNNNCTG 2 cut(s) 176, 886
CfoI GCGC 2 cut(s) 380, 1166
Cfr13I GGNCC 8 cut(s) 173, 305, 316, 317, 800, 1316, 1450, 1517
CseI GACGC 1 cut(s) 29
Csp6I GTAC 7 cut(s) 515, 695, 926, 932, 1268, 1510, 1538
CviAII CATG 6 cut(s) 117, 121, 219, 238, 330, 484
CviQI GTAC 7 cut(s) 515, 695, 926, 932, 1268, 1510, 1538
DdeI CTNAG 4 cut(s) 71, 381, 725, 859
DpnI GATC 1 cut(s) 885
DpnII GATC 1 cut(s) 883
EaeI YGGCCR 2 cut(s) 151, 1343
Eam1104I CTCTTC 2 cut(s) 768, 1293
EarI CTCTTC 2 cut(s) 768, 1293
Eco130I CCWWGG 1 cut(s) 237
Eco24I GRGCYC 1 cut(s) 320
Eco32I GATATC 1 cut(s) 687
Eco47I GGWCC 5 cut(s) 173, 305, 800, 1316, 1517
Eco57I CTGAAG 1 cut(s) 1317
Eco88I CYCGRG 3 cut(s) 671, 1059, 1126
EcoO109I RGGNCCY 4 cut(s) 173, 316, 1316, 1517
EcoRII CCWGG 4 cut(s) 308, 879, 1312, 1452
EcoRV GATATC 1 cut(s) 687
EcoT14I CCWWGG 1 cut(s) 237
EcoT22I ATGCAT 2 cut(s) 122, 958
EcoT38I GRGCYC 1 cut(s) 320
ErhI CCWWGG 1 cut(s) 237
Esp3I CGTCTC 1 cut(s) 47
FaeI CATG 6 cut(s) 120, 124, 222, 241, 333, 487
FaqI GGGAC 2 cut(s) 151, 448
FatI CATG 6 cut(s) 116, 120, 218, 237, 329, 483
FauNDI CATATG 1 cut(s) 566
FblI GTMKAC 1 cut(s) 677
Fnu4HI GCNGC 7 cut(s) 291, 608, 756, 759, 1056, 1167, 1343
FokI GGATG 7 cut(s) 207, 863, 1097, 1101, 1211, 1508, 1545
FriOI GRGCYC 1 cut(s) 320
Fsp4HI GCNGC 7 cut(s) 291, 608, 756, 759, 1056, 1167, 1343
FspBI CTAG 4 cut(s) 690, 1281, 1472, 1500
GlaI GCGC 2 cut(s) 379, 1165
GluI GCNGC 7 cut(s) 291, 608, 756, 759, 1056, 1167, 1343
GsaI CCCAGC 1 cut(s) 1252
GsuI CTGGAG 2 cut(s) 802, 1005
HaeII RGCGCY 1 cut(s) 381
HaeIII GGCC 4 cut(s) 153, 318, 1345, 1451
HapII CCGG 1 cut(s) 30
HgaI GACGC 1 cut(s) 29
HhaI GCGC 2 cut(s) 380, 1166
Hin1II CATG 6 cut(s) 120, 124, 222, 241, 333, 487
Hin6I GCGC 2 cut(s) 378, 1164
HinP1I GCGC 2 cut(s) 378, 1164
HincII GTYRAC 2 cut(s) 627, 678
HindII GTYRAC 2 cut(s) 627, 678
HindIII AAGCTT 1 cut(s) 157
HinfI GANTC 3 cut(s) 4, 26, 674
HpaII CCGG 1 cut(s) 30
HphI GGTGA 5 cut(s) 199, 589, 1036, 1095, 1300
Hpy166II GTNNAC 5 cut(s) 132, 627, 678, 926, 1123
Hpy188I TCNGA 5 cut(s) 74, 230, 363, 726, 1187
Hpy188III TCNNGA 7 cut(s) 30, 94, 262, 671, 887, 1198, 1369
Hpy8I GTNNAC 5 cut(s) 132, 627, 678, 926, 1123
HpyAV CCTTC 4 cut(s) 69, 220, 960, 1030
HpyCH4III ACNGT 3 cut(s) 624, 737, 902
HpyCH4IV ACGT 1 cut(s) 86
HpyF10VI GCNNNNNNNGC 8 cut(s) 176, 299, 377, 392, 401, 1245, 1448, 1496
HpyF3I CTNAG 4 cut(s) 71, 381, 725, 859
HpySE526I ACGT 1 cut(s) 86
Hsp92II CATG 6 cut(s) 120, 124, 222, 241, 333, 487
HspAI GCGC 2 cut(s) 378, 1164
Kpn2I TCCGGA 1 cut(s) 29
Kzo9I GATC 1 cut(s) 883
LmnI GCTCC 1 cut(s) 986
Lsp1109I GCAGC 6 cut(s) 277, 594, 742, 770, 1042, 1153
LweI GCATC 5 cut(s) 742, 885, 943, 1486, 1567
MaeI CTAG 4 cut(s) 690, 1281, 1472, 1500
MaeII ACGT 1 cut(s) 86
MaeIII GTNAC 4 cut(s) 56, 205, 1042, 1566
MalI GATC 1 cut(s) 885
MboI GATC 1 cut(s) 883
MboII GAAGA 8 cut(s) 205, 246, 633, 640, 785, 1015, 1310, 1384
MflI RGATCY 1 cut(s) 883
MhlI GDGCHC 1 cut(s) 320
MlsI TGGCCA 1 cut(s) 153
MluCI AATT 7 cut(s) 246, 354, 536, 730, 976, 1233, 1435
MluNI TGGCCA 1 cut(s) 153
MlyI GAGTC 1 cut(s) 683
MmeI TCCRAC 3 cut(s) 208, 1166, 1473
MnlI CCTC 7 cut(s) 153, 443, 512, 621, 1122, 1250, 1376
Mox20I TGGCCA 1 cut(s) 153
Mph1103I ATGCAT 2 cut(s) 122, 958
MroI TCCGGA 1 cut(s) 29
MroXI GAANNNNTTC 1 cut(s) 1430
MscI TGGCCA 1 cut(s) 153
MseI TTAA 2 cut(s) 185, 552
MslI CAYNNNNRTG 5 cut(s) 115, 125, 488, 1108, 1175
Msp20I TGGCCA 1 cut(s) 153
MspI CCGG 1 cut(s) 30
MspR9I CCNGG 4 cut(s) 310, 881, 1314, 1454
MvaI CCWGG 4 cut(s) 310, 881, 1314, 1454
MwoI GCNNNNNNNGC 8 cut(s) 176, 299, 377, 392, 401, 1245, 1448, 1496
NcoI CCATGG 1 cut(s) 237
NdeI CATATG 1 cut(s) 566
NdeII GATC 1 cut(s) 883
NlaIII CATG 6 cut(s) 120, 124, 222, 241, 333, 487
NlaIV GGNNCC 7 cut(s) 307, 317, 318, 621, 1018, 1140, 1318
NmuCI GTSAC 3 cut(s) 205, 1042, 1566
NsiI ATGCAT 2 cut(s) 122, 958
NspI RCATGY 2 cut(s) 124, 487
OliI CACNNNNGTG 1 cut(s) 1108
PaqCI CACCTGC 1 cut(s) 565
PasI CCCWGGG 1 cut(s) 1453
PdmI GAANNNNTTC 1 cut(s) 1430
PfeI GAWTC 2 cut(s) 4, 26
PflMI CCANNNNNTGG 3 cut(s) 570, 886, 1248
PfoI TCCNGGA 1 cut(s) 879
PkrI GCNGC 7 cut(s) 292, 609, 757, 760, 1057, 1168, 1344
PleI GAGTC 1 cut(s) 682
PpsI GAGTC 1 cut(s) 682
PpuMI RGGWCCY 3 cut(s) 173, 1316, 1517
PsiI TTATAA 1 cut(s) 602
Psp5II RGGWCCY 3 cut(s) 173, 1316, 1517
Psp6I CCWGG 4 cut(s) 308, 879, 1312, 1452
PspFI CCCAGC 1 cut(s) 1248
PspGI CCWGG 4 cut(s) 308, 879, 1312, 1452
PspN4I GGNNCC 7 cut(s) 307, 317, 318, 621, 1018, 1140, 1318
PspOMI GGGCCC 1 cut(s) 316
PspPI GGNCC 8 cut(s) 173, 305, 316, 317, 800, 1316, 1450, 1517
PspPPI RGGWCCY 3 cut(s) 173, 1316, 1517
PstI CTGCAG 1 cut(s) 760
PstNI CAGNNNCTG 2 cut(s) 176, 886
PsuI RGATCY 1 cut(s) 883
RsaI GTAC 7 cut(s) 516, 696, 927, 933, 1269, 1511, 1539
RsaNI GTAC 7 cut(s) 515, 695, 926, 932, 1268, 1510, 1538
RseI CAYNNNNRTG 5 cut(s) 115, 125, 488, 1108, 1175
SalI GTCGAC 1 cut(s) 676
SaqAI TTAA 2 cut(s) 185, 552
SatI GCNGC 7 cut(s) 291, 608, 756, 759, 1056, 1167, 1343
Sau3AI GATC 1 cut(s) 883
Sau96I GGNCC 8 cut(s) 173, 305, 316, 317, 800, 1316, 1450, 1517
ScaI AGTACT 1 cut(s) 516
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 4 cut(s) 310, 881, 1314, 1454
SduI GDGCHC 1 cut(s) 320
SfaNI GCATC 5 cut(s) 742, 885, 943, 1486, 1567
SfcI CTRYAG 2 cut(s) 756, 804
SinI GGWCC 5 cut(s) 173, 305, 800, 1316, 1517
SmiMI CAYNNNNRTG 5 cut(s) 115, 125, 488, 1108, 1175
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
SpeI ACTAGT 1 cut(s) 1471
Sse9I AATT 7 cut(s) 246, 354, 536, 730, 976, 1233, 1435
SsiI CCGC 2 cut(s) 1342, 1562
SspMI CTAG 4 cut(s) 690, 1281, 1472, 1500
StyD4I CCNGG 4 cut(s) 308, 879, 1312, 1452
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 3 cut(s) 624, 737, 902
TaiI ACGT 1 cut(s) 89
TaqI TCGA 2 cut(s) 677, 1420
TasI AATT 7 cut(s) 246, 354, 536, 730, 976, 1233, 1435
TatI WGTACW 3 cut(s) 514, 925, 1537
TauI GCSGC 1 cut(s) 1345
TfiI GAWTC 2 cut(s) 4, 26
Tru1I TTAA 2 cut(s) 185, 552
Tru9I TTAA 2 cut(s) 185, 552
TseFI GTSAC 3 cut(s) 205, 1042, 1566
TseI GCWGC 6 cut(s) 290, 607, 755, 758, 1055, 1166
Tsp45I GTSAC 3 cut(s) 205, 1042, 1566
TspDTI ATGAA 5 cut(s) 105, 318, 406, 529, 1207
TspGWI ACGGA 1 cut(s) 785
Van91I CCANNNNNTGG 3 cut(s) 570, 886, 1248
VpaK11BI GGWCC 5 cut(s) 173, 305, 800, 1316, 1517
XapI RAATTY 1 cut(s) 246
XceI RCATGY 2 cut(s) 124, 487
XcmI CCANNNNNNNNNTGG 3 cut(s) 327, 1201, 1249
XmiI GTMKAC 1 cut(s) 677
XmnI GAANNNNTTC 1 cut(s) 1430
XspI CTAG 4 cut(s) 690, 1281, 1472, 1500
ZrmI AGTACT 1 cut(s) 516
Zsp2I ATGCAT 2 cut(s) 122, 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.