Rorug07G0019600

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
1494307 .. 1497412
3106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0019600.1

Sequence Viewer

Length: 2589 bp
ATGGAGTTTGCCAGTGGTGTTGCGGAGAATGTCTTGGGTAGGCTGGCCTCTTATGCTGCCGAAGAAGTTTGCTTGGCTTGGGGTGCCCAACATGAGCTGAAGAAGCTCAATAAGACCTTGTTAGCCATCAAACTTGTGCTCCAGGATGCAGAGAAGAAGCAAATGCAGAATCCCCTCATCACTCATTGGTTAGGAAACCTCAAAGATGTTTGCAATGATGCTGAGGATGTACTCGACGAATTTGAGTTCCAAAAGCTCCGACTTAAATTGCTCATCAACGACCGCTGGAGCGTCAAAGGAAAGGTACACCAATTCTTCTCCCGTTGGAATCCAGTCGTGTTTAACTTCAAAATAGGTCATAAAATCAAAGAGATTAGAGAAAGTTTGGTTGAGATTGATGACGAAAAGAGAAAGTTTTCTCTCAATCAAATTACTGAATTAGCTGACGATTATCGTGTGCCCCAAAGGGTGCATGATACTAGAAGGGAGACAGACTCTTTACCAGAGGCGTATGTTGTTGGAAGAGATGGGGACAGAAAACAGATTATTAACCATCTCTTGAATGACACCCGTTCTTTTGGTAATGAGAATGTTTCAGTTATCTCCATCATAGGGTTAGGTGGTTCGGGAAAAACTACACTTGCTAAAATGGTGTACAATGATAATGTGGTAGAAGAAAACTTTGAGATGAGATTGTGGATATGTGTCTCTGATAAATTTGATATCCATACATTAGTTAAAGGCATTATTGCTGAAACTAAAAAGGAATGTGATTATGGAAGTTTGAATCTTATGAAAAAGGGGTTGCAAGAAATCTTGAGAGGTAAAAAGTTTTTGTTAGTCTTGGATGATGTTTGGGACACAGAGTCAACAGGATTTACAGTTCAAAAATGGGATGAGTTAATATCTCTGTTACATGTTGGAGCCAAAGGGAGTAAAATCATCGTGACAACACGTAGTGAATTAGTCGGTTCACTTGTACACCCTATACAAATGCATTCTTTAAAATGTCTTTCTCATGAGAATTCCATGATTTTGTTTAAAAAAAATGCATTTTACGAGGGAGAGGAGCAACACTATCAACACTTGATAGAAATTGGGGAGAACATTGTGAAGAAGTGTGGAGGTGTTCCCTTAGCACTAGTTACTCTAGGGAGCATGCTCCGCTCGAAAAGGGAGCGACGCGACTGGTTACGTGTAAAAGATGATGAAATTTGGAGTATGTCAGGAAACGACAACATTATGGTTGCACTAAAATTGAGTTACAATGCATTGCCACCTCACTTGAAATCTTGTTTTGCCTTTTGTTCACTTTACCCCAAGGATTATGTATTCAATAGTAAAGACATAGTCCCATTATGGATGGCACAAGGCTATCTCAAGTCCTCAAGAGAAAATGAAGATTTTGAAGAGACGGGCATAGACTGTATAAGGTTGTTTTGTTCCAAGTCTTTGTTTCAACTTGAGATGGATTTGAAGACTATCATAGCGTTCAAAATTCATGATCTATTGCACGATTTAGCAATATCAATGGCAGGGGTTGAGTATTCCACTGTTAATTGTCGTCCCTCAAGTGCTTTCGAAAAAGTCCGACACATGTCAATAACAGCAAATGACTTGCCTGGAGATGAGGCACGAGTCCTAGAATTCATTCTCCAGTTGGAGAAACTGCGAACCATTTTAAATGTAGATGGTGATGCAAGGATCTCCAATCAATATTTTCTAACGACATGCATCTCGAGATTCAAGTATATGCGTGCACTAGATGTACATGGGTCTACTCTTGAGGAGCTACCAAGTTCCATTGGTAACTTGAGTCATTTGAGATATCTCAACCTGAAGGATAACACAAAGTTAAGAAAGCTTCCCACTTTCATTTGCAAACTCTTGAATTTGCAGTTCTTAAGCCTTGAAGGTTGTGAGGCACTTGAGGAGTTACCCAACGGCATAGGGAACCTGATCAACCTCAGATTTTTGTATATAACTACACAACAGATGTATTTGCCGAAAGGAGTATTCAGACACCTCACCTTGCTTCAAACATTATCAATCTCGAGCTGTAAAAATCTAAAATCTCTGGGCAAAGAGATGGAATACCTCACTGACCTTCGTCAGCTGGTGATTGGTAGTTGTGAAAATCTGGAGTCCTTGCCACCTAACATGAAGAACTTGACTGCATTACATACTTTGGCGATCGGGAATTGTAAGAAGCTTGAGTTAATGAGGTCGGGAGAAGGCATCAATGGTCTCATATCCTTCATTGTCGGCACATCAGATTTGGAGGCTTTGCCCAATTGGCTTCAAGAGTCTGTAGACACTTTACAGAGCATGGCAATCGGGGAGAGTGATAATCTCACGGCACTTCCAGAGTGGTTACAAAATCTCACCTTGCTGGAGCAATTGGTGATTGTGGGCTGCCCCAAATTGTCTGCTTTGCCGCAAGGGATGCATTGCCTCACTGCCTTGAAAGAATTGCGGATTCAAGGGTGTCCTGAATTGAGAAAAAGATGCAGAAGGGAAACAGGAGAGGAATGGTCCAAGATCAAACATGTCCCAAAGATTGTACTCGACGACTCTGACGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

862

Amino Acids

98.07

Weight (kDa)

6.26

Isoelectric Point (pI)

39.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 96 1.8e-22 Rx N-terminal domain
NB-ARC PF00931 181 - 353 4.9e-33 NB-ARC domain
WHD_DRP PF23559 438 - 508 6.5e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 577 - 779 2.6e-26 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 83
AccBSI CCGCTC 1 cut(s) 1167
AccI GTMKAC 2 cut(s) 1778, 2313
AccII CGCG 1 cut(s) 1185
AciI CCGC 5 cut(s) 23, 283, 1165, 2438, 2476
AclWI GGATC 1 cut(s) 1712
AcsI RAATTY 7 cut(s) 239, 716, 1024, 1212, 1497, 1646, 1891
AcuI CTGAAG 2 cut(s) 119, 1859
AdeI CACNNNGTG 1 cut(s) 959
AfaI GTAC 6 cut(s) 231, 306, 656, 981, 1770, 2565
AfiI CCNNNNNNNGG 1 cut(s) 612
AflII CTTAAG 1 cut(s) 1903
AflIII ACRYGT 5 cut(s) 916, 953, 1195, 1596, 2548
AhdI GACNNNNNGTC 1 cut(s) 865
AhlI ACTAGT 1 cut(s) 1141
AjnI CCWGG 2 cut(s) 141, 1621
AloI GAACNNNNNNTCC 2 cut(s) 867, 899
AluBI AGCT 9 cut(s) 97, 106, 256, 443, 1792, 1864, 2058, 2116, 2212
AluI AGCT 9 cut(s) 97, 106, 256, 443, 1792, 1864, 2058, 2116, 2212
Alw21I GWGCWC 2 cut(s) 141, 1762
Alw26I GTCTC 4 cut(s) 482, 712, 1406, 2252
Alw44I GTGCAC 1 cut(s) 1758
AlwI GGATC 1 cut(s) 1712
Ama87I CYCGRG 2 cut(s) 1738, 2053
AoxI GGCC 1 cut(s) 45
ApaLI GTGCAC 1 cut(s) 1758
ApeKI GCWGC 2 cut(s) 56, 2415
ApoI RAATTY 7 cut(s) 239, 716, 1024, 1212, 1497, 1646, 1891
Asp700I GAANNNNTTC 2 cut(s) 415, 1650
AspS9I GGNCC 1 cut(s) 2535
AsuHPI GGTGA 5 cut(s) 1706, 2020, 2131, 2377, 2416
AsuII TTCGAA 1 cut(s) 1581
AvaI CYCGRG 2 cut(s) 1738, 2053
AvaII GGWCC 1 cut(s) 2535
BaeGI GKGCMC 3 cut(s) 88, 462, 1762
BanI GGYRCC 1 cut(s) 83
BauI CACGAG 1 cut(s) 1635
BbsI GAAGAC 1 cut(s) 1484
Bbv12I GWGCWC 2 cut(s) 141, 1762
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 2 cut(s) 43, 2402
BccI CCATC 8 cut(s) 134, 521, 561, 614, 1357, 1462, 1685, 2083
BceAI ACGGC 2 cut(s) 1960, 2373
BcgI CGANNNNNNTGC 2 cut(s) 2317, 2351
BciT130I CCWGG 2 cut(s) 143, 1623
BclI TGATCA 1 cut(s) 1959
BcoDI GTCTC 4 cut(s) 482, 712, 1406, 2252
BcuI ACTAGT 1 cut(s) 1141
BfaI CTAG 5 cut(s) 480, 1142, 1151, 1643, 1763
BfmI CTRYAG 1 cut(s) 2310
BfrI CTTAAG 1 cut(s) 1903
BglI GCCNNNNNGGC 1 cut(s) 2296
BisI GCNGC 3 cut(s) 57, 2416, 2438
BlsI GCNGC 3 cut(s) 58, 2417, 2439
Bme1390I CCNGG 2 cut(s) 143, 1623
Bme18I GGWCC 1 cut(s) 2535
BmeRI GACNNNNNGTC 1 cut(s) 865
BmeT110I CYCGRG 2 cut(s) 1738, 2053
BmgT120I GGNCC 1 cut(s) 2535
BmiI GGNNCC 3 cut(s) 85, 925, 1955
BmrFI CCNGG 2 cut(s) 143, 1623
BmsI GCATC 7 cut(s) 136, 208, 1687, 1743, 2247, 2436, 2498
BoxI GACNNNNGTC 2 cut(s) 1597, 2109
BpiI GAAGAC 1 cut(s) 1484
BplI GAGNNNNNCTC 2 cut(s) 479, 511
BpmI CTGGAG 6 cut(s) 125, 307, 1640, 1644, 2162, 2414
Bpu10I CCTNAGC 2 cut(s) 222, 1135
Bpu14I TTCGAA 1 cut(s) 1581
BpuEI CTTGAG 9 cut(s) 838, 1364, 1372, 1484, 1555, 1805, 1834, 1949, 2234
BsaAI YACGTR 2 cut(s) 956, 1196
BsaI GGTCTC 1 cut(s) 2252
BsaJI CCNNGG 1 cut(s) 1320
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 1 cut(s) 612
Bse1I ACTGG 4 cut(s) 12, 332, 1193, 1657
Bse3DI GCAATG 3 cut(s) 220, 1271, 2449
BseBI CCWGG 2 cut(s) 143, 1623
BseDI CCNNGG 1 cut(s) 1320
BseGI GGATG 6 cut(s) 151, 232, 853, 901, 1368, 2451
BseLI CCNNNNNNNGG 1 cut(s) 612
BseMI GCAATG 3 cut(s) 220, 1271, 2449
BseMII CTCAG 2 cut(s) 213, 1981
BseNI ACTGG 4 cut(s) 12, 332, 1193, 1657
BseRI GAGGAG 3 cut(s) 1082, 1802, 1946
BseSI GKGCMC 3 cut(s) 88, 462, 1762
BseXI GCAGC 2 cut(s) 43, 2402
Bsh1236I CGCG 1 cut(s) 1185
Bsh1285I CGRYCG 2 cut(s) 283, 2196
BshFI GGCC 1 cut(s) 47
BshNI GGYRCC 1 cut(s) 83
BsiEI CGRYCG 2 cut(s) 283, 2196
BsiHKAI GWGCWC 2 cut(s) 141, 1762
BsiHKCI CYCGRG 2 cut(s) 1738, 2053
BslFI GGGAC 5 cut(s) 545, 872, 1337, 1551, 2537
BslI CCNNNNNNNGG 1 cut(s) 612
BsmAI GTCTC 4 cut(s) 482, 712, 1406, 2252
BsmBI CGTCTC 1 cut(s) 1406
BsmFI GGGAC 5 cut(s) 545, 872, 1337, 1551, 2537
BsmI GAATGC 1 cut(s) 997
BsnI GGCC 1 cut(s) 47
Bso31I GGTCTC 1 cut(s) 2252
BsoBI CYCGRG 2 cut(s) 1738, 2053
Bsp119I TTCGAA 1 cut(s) 1581
Bsp1286I GDGCHC 4 cut(s) 88, 141, 462, 1762
Bsp1407I TGTACA 3 cut(s) 654, 979, 1768
Bsp143I GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
BspACI CCGC 5 cut(s) 23, 283, 1165, 2438, 2476
BspANI GGCC 1 cut(s) 47
BspCNI CTCAG 2 cut(s) 214, 1980
BspFNI CGCG 1 cut(s) 1185
BspHI TCATGA 2 cut(s) 1018, 1501
BspLI GGNNCC 3 cut(s) 85, 925, 1955
BspPI GGATC 1 cut(s) 1712
BspT104I TTCGAA 1 cut(s) 1581
BspT107I GGYRCC 1 cut(s) 83
BspTI CTTAAG 1 cut(s) 1903
BspTNI GGTCTC 1 cut(s) 2252
BsrBI CCGCTC 1 cut(s) 1167
BsrDI GCAATG 3 cut(s) 220, 1271, 2449
BsrGI TGTACA 3 cut(s) 654, 979, 1768
BsrI ACTGG 4 cut(s) 12, 332, 1193, 1657
BssECI CCNNGG 1 cut(s) 1320
BssMI GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
BssSI CACGAG 1 cut(s) 1635
BssT1I CCWWGG 1 cut(s) 1320
Bst2BI CACGAG 1 cut(s) 1635
Bst2UI CCWGG 2 cut(s) 143, 1623
Bst4CI ACNGT 3 cut(s) 883, 1427, 1555
Bst6I CTCTTC 2 cut(s) 517, 1404
BstAFI CTTAAG 1 cut(s) 1903
BstAPI GCANNNNNTGC 1 cut(s) 2446
BstAUI TGTACA 3 cut(s) 654, 979, 1768
BstBAI YACGTR 2 cut(s) 956, 1196
BstBI TTCGAA 1 cut(s) 1581
BstC8I GCNNGC 3 cut(s) 45, 1160, 1758
BstDEI CTNAG 3 cut(s) 222, 1135, 1967
BstF5I GGATG 6 cut(s) 151, 232, 853, 901, 1368, 2451
BstFNI CGCG 1 cut(s) 1185
BstKTI GATC 5 cut(s) 1507, 1707, 1962, 2196, 2544
BstMAI GTCTC 4 cut(s) 482, 712, 1406, 2252
BstMBI GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
BstMCI CGRYCG 2 cut(s) 283, 2196
BstMWI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 1164, 2296, 2446
BstNI CCWGG 2 cut(s) 143, 1623
BstNSI RCATGY 5 cut(s) 920, 1162, 1600, 1734, 2552
BstPAI GACNNNNGTC 2 cut(s) 1597, 2109
BstSCI CCNGG 2 cut(s) 141, 1621
BstSFI CTRYAG 1 cut(s) 2310
BstSLI GKGCMC 3 cut(s) 88, 462, 1762
BstUI CGCG 1 cut(s) 1185
BstV1I GCAGC 2 cut(s) 43, 2402
BstV2I GAAGAC 1 cut(s) 1484
BstX2I RGATCY 1 cut(s) 1704
BstYI RGATCY 1 cut(s) 1704
BsuRI GGCC 1 cut(s) 47
BtsCI GGATG 6 cut(s) 151, 232, 853, 901, 1368, 2451
BtsI GCAGTG 1 cut(s) 2457
BtsIMutI CAGTG 4 cut(s) 19, 1551, 2100, 2457
Cac8I GCNNGC 3 cut(s) 45, 1160, 1758
CciI TCATGA 2 cut(s) 1018, 1501
Cfr13I GGNCC 1 cut(s) 2535
CseI GACGC 2 cut(s) 280, 1191
Csp6I GTAC 6 cut(s) 230, 305, 655, 980, 1769, 2564
CspCI CAANNNNNGTGG 2 cut(s) 1266, 1301
CviQI GTAC 6 cut(s) 230, 305, 655, 980, 1769, 2564
DdeI CTNAG 3 cut(s) 222, 1135, 1967
DpnI GATC 5 cut(s) 1506, 1706, 1961, 2195, 2543
DpnII GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
DraI TTTAAA 3 cut(s) 1005, 1042, 1683
DraIII CACNNNGTG 1 cut(s) 959
DriI GACNNNNNGTC 1 cut(s) 865
Eam1104I CTCTTC 2 cut(s) 517, 1404
Eam1105I GACNNNNNGTC 1 cut(s) 865
EarI CTCTTC 2 cut(s) 517, 1404
Eco130I CCWWGG 1 cut(s) 1320
Eco31I GGTCTC 1 cut(s) 2252
Eco32I GATATC 2 cut(s) 724, 1829
Eco47I GGWCC 1 cut(s) 2535
Eco57I CTGAAG 2 cut(s) 119, 1859
Eco88I CYCGRG 2 cut(s) 1738, 2053
EcoRI GAATTC 2 cut(s) 1024, 1646
EcoRII CCWGG 2 cut(s) 141, 1621
EcoRV GATATC 2 cut(s) 724, 1829
EcoT14I CCWWGG 1 cut(s) 1320
EcoT22I ATGCAT 5 cut(s) 999, 1054, 1273, 1736, 2451
ErhI CCWWGG 1 cut(s) 1320
Esp3I CGTCTC 1 cut(s) 1406
FaqI GGGAC 5 cut(s) 545, 872, 1337, 1551, 2537
FbaI TGATCA 1 cut(s) 1959
FblI GTMKAC 2 cut(s) 1778, 2313
Fnu4HI GCNGC 3 cut(s) 57, 2416, 2438
FokI GGATG 6 cut(s) 158, 239, 860, 908, 1375, 2458
Fsp4HI GCNGC 3 cut(s) 57, 2416, 2438
FspBI CTAG 5 cut(s) 480, 1142, 1151, 1643, 1763
GluI GCNGC 3 cut(s) 57, 2416, 2438
GsuI CTGGAG 6 cut(s) 125, 307, 1640, 1644, 2162, 2414
HaeIII GGCC 1 cut(s) 47
HgaI GACGC 2 cut(s) 280, 1191
HincII GTYRAC 1 cut(s) 870
HindII GTYRAC 1 cut(s) 870
HindIII AAGCTT 2 cut(s) 1862, 2210
HphI GGTGA 5 cut(s) 1706, 2020, 2131, 2377, 2416
Hpy166II GTNNAC 9 cut(s) 307, 655, 870, 974, 982, 1310, 1760, 1779, 2314
Hpy188I TCNGA 7 cut(s) 260, 712, 1592, 1970, 2021, 2275, 2578
Hpy8I GTNNAC 9 cut(s) 307, 655, 870, 974, 982, 1310, 1760, 1779, 2314
Hpy99I CGWCG 3 cut(s) 239, 1185, 2573
HpyAV CCTTC 7 cut(s) 477, 1834, 1907, 2117, 2228, 2266, 2508
HpyCH4III ACNGT 3 cut(s) 883, 1427, 1555
HpyCH4IV ACGT 2 cut(s) 955, 1195
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 1164, 2296, 2446
HpyF3I CTNAG 3 cut(s) 222, 1135, 1967
HpySE526I ACGT 2 cut(s) 955, 1195
Ksp22I TGATCA 1 cut(s) 1959
Kzo9I GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
Lsp1109I GCAGC 2 cut(s) 43, 2402
LweI GCATC 7 cut(s) 136, 208, 1687, 1743, 2247, 2436, 2498
MaeI CTAG 5 cut(s) 480, 1142, 1151, 1643, 1763
MaeII ACGT 2 cut(s) 955, 1195
MaeIII GTNAC 8 cut(s) 912, 946, 1144, 1191, 1262, 1808, 1935, 2373
MalI GATC 5 cut(s) 1506, 1706, 1961, 2195, 2543
MbiI CCGCTC 1 cut(s) 1167
MboI GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
MfeI CAATTG 2 cut(s) 2293, 2399
MflI RGATCY 1 cut(s) 1704
MhlI GDGCHC 4 cut(s) 88, 141, 462, 1762
MlyI GAGTC 7 cut(s) 488, 875, 1647, 1825, 2153, 2315, 2567
MmeI TCCRAC 6 cut(s) 283, 305, 499, 901, 1615, 1641
Mph1103I ATGCAT 5 cut(s) 999, 1054, 1273, 1736, 2451
MroXI GAANNNNTTC 2 cut(s) 415, 1650
MspA1I CMGCKG 2 cut(s) 285, 2116
MspCI CTTAAG 1 cut(s) 1903
MspR9I CCNGG 2 cut(s) 143, 1623
MunI CAATTG 2 cut(s) 2293, 2399
Mva1269I GAATGC 1 cut(s) 997
MvaI CCWGG 2 cut(s) 143, 1623
MvnI CGCG 1 cut(s) 1185
MwoI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 1164, 2296, 2446
NdeII GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
NlaIV GGNNCC 3 cut(s) 85, 925, 1955
NmuCI GTSAC 1 cut(s) 946
NsiI ATGCAT 5 cut(s) 999, 1054, 1273, 1736, 2451
NspI RCATGY 5 cut(s) 920, 1162, 1600, 1734, 2552
NspV TTCGAA 1 cut(s) 1581
PaeI GCATGC 1 cut(s) 1162
PaeR7I CTCGAG 2 cut(s) 1738, 2053
PagI TCATGA 2 cut(s) 1018, 1501
PciI ACATGT 3 cut(s) 916, 1596, 2548
PcsI WCGNNNNNNNCGW 1 cut(s) 2577
PctI GAATGC 1 cut(s) 997
PdmI GAANNNNTTC 2 cut(s) 415, 1650
PfeI GAWTC 5 cut(s) 169, 328, 787, 1743, 2479
PflFI GACNNNGTC 1 cut(s) 1349
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 3 cut(s) 58, 2417, 2439
Ple19I CGATCG 1 cut(s) 2196
PleI GAGTC 7 cut(s) 488, 874, 1646, 1824, 2152, 2314, 2567
PpsI GAGTC 7 cut(s) 488, 874, 1646, 1824, 2152, 2314, 2567
Ppu21I YACGTR 2 cut(s) 956, 1196
PscI ACATGT 3 cut(s) 916, 1596, 2548
PshAI GACNNNNGTC 2 cut(s) 1597, 2109
Psp6I CCWGG 2 cut(s) 141, 1621
PspGI CCWGG 2 cut(s) 141, 1621
PspN4I GGNNCC 3 cut(s) 85, 925, 1955
PspPI GGNCC 1 cut(s) 2535
PsuI RGATCY 1 cut(s) 1704
PsyI GACNNNGTC 1 cut(s) 1349
PvuI CGATCG 1 cut(s) 2196
PvuII CAGCTG 1 cut(s) 2116
RsaI GTAC 6 cut(s) 231, 306, 656, 981, 1770, 2565
RsaNI GTAC 6 cut(s) 230, 305, 655, 980, 1769, 2564
SatI GCNGC 3 cut(s) 57, 2416, 2438
Sau3AI GATC 5 cut(s) 1504, 1704, 1959, 2193, 2541
Sau96I GGNCC 1 cut(s) 2535
SchI GAGTC 7 cut(s) 488, 875, 1647, 1825, 2153, 2315, 2567
ScrFI CCNGG 2 cut(s) 143, 1623
SduI GDGCHC 4 cut(s) 88, 141, 462, 1762
SfaNI GCATC 7 cut(s) 136, 208, 1687, 1743, 2247, 2436, 2498
SfcI CTRYAG 1 cut(s) 2310
Sfr274I CTCGAG 2 cut(s) 1738, 2053
SfuI TTCGAA 1 cut(s) 1581
SinI GGWCC 1 cut(s) 2535
SlaI CTCGAG 2 cut(s) 1738, 2053
SpeI ACTAGT 1 cut(s) 1141
SphI GCATGC 1 cut(s) 1162
SsiI CCGC 5 cut(s) 23, 283, 1165, 2438, 2476
SspI AATATT 1 cut(s) 1718
SspMI CTAG 5 cut(s) 480, 1142, 1151, 1643, 1763
StyD4I CCNGG 2 cut(s) 141, 1621
StyI CCWWGG 1 cut(s) 1320
TaaI ACNGT 3 cut(s) 883, 1427, 1555
TaiI ACGT 2 cut(s) 958, 1198
TaqI TCGA 6 cut(s) 234, 1169, 1581, 1739, 2054, 2568
TatI WGTACW 5 cut(s) 229, 654, 979, 1768, 2563
TauI GCSGC 1 cut(s) 2440
TfiI GAWTC 5 cut(s) 169, 328, 787, 1743, 2479
TscAI CASTG 4 cut(s) 19, 1558, 2107, 2464
TseFI GTSAC 1 cut(s) 946
TseI GCWGC 2 cut(s) 56, 2415
Tsp45I GTSAC 1 cut(s) 946
TspDTI ATGAA 8 cut(s) 809, 1224, 1413, 1490, 1639, 1864, 2177, 2248
TspRI CASTG 4 cut(s) 19, 1558, 2107, 2464
Tth111I GACNNNGTC 1 cut(s) 1349
Vha464I CTTAAG 1 cut(s) 1903
VneI GTGCAC 1 cut(s) 1758
VpaK11BI GGWCC 1 cut(s) 2535
XapI RAATTY 7 cut(s) 239, 716, 1024, 1212, 1497, 1646, 1891
XceI RCATGY 5 cut(s) 920, 1162, 1600, 1734, 2552
XhoI CTCGAG 2 cut(s) 1738, 2053
XmiI GTMKAC 2 cut(s) 1778, 2313
XmnI GAANNNNTTC 2 cut(s) 415, 1650
XspI CTAG 5 cut(s) 480, 1142, 1151, 1643, 1763
Zsp2I ATGCAT 5 cut(s) 999, 1054, 1273, 1736, 2451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.