Rorug07G0093500

Calcineurin B-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0004274
Physical Location & Seq
Reverse (-)
7324546 .. 7328317
3772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0093500.1

Sequence Viewer

Length: 3066 bp
ATGGGTTTAGCTTCACATGGGAGAAACCTTGCATTTCAGATTGGTAATCCAAAATCAAGGCCTTTGATTCGGGTCCACTACTACTGCAGTTATAAATCAGAGAGTAAAAAGCAGCAAGAGGATGATGAAACAGTGAGGGAAATCTGTACCATTCTGAAGCGAAGCAGAGAGTGGGAGTCCGTGTTGAGCTCATCAGGGTTTCCCAAGAAGCTAAACCCTCGTGTGGTTCGATCCGTTCTTCAACAACACCACCAGGTTGGTGACCCAGAAAGACTTTTAAGTTTCTTTGATTGGTCTGGTGCCCAATTGGGTGTGCTCCCAAATTTGCATTCTTTTTCGATTATGGCTGTTGTTTTGTGTAATTCCAAGCTTTTTGGGCATGCCCATGGTGTGTTGGAGAGAATGGTTAGGACCCGGAAGCCGGCTTTACAAGTTTTGGATTGTGTTGTTAGGTGTTTTAGAGAGTTTGAGGGGTCTGATATGGTGGTTTTTGAGATTTTGATCAATGTGTTTACGATGGGGGGTTGGTTTTATGAGGCTGCTGATGTGTTTTTGGGTGTTAGGAGTGTTGGGATTTCGCCGAGATTGGAATGCTGTAATTCTCTGTTGAACGAGTTGTTGAAGGGTAATAGGATGAGGCTGTTCTGGAAAGTGTATGATGGGATGTTAGAGGCTAAGATTGAGCCGGATTTTTACACTTATAGCAATGTGATCAACGCACATTGTAAGTTTGGGGATGTTAGGAAGGGTAAGAGGCTACTGTTTGAGATGGTAGAGAAGGGCTGTAATCCGAATTTGAGTACCTTCAATGTGGTGATTGATGGATTGTGTAGAGGTAGGGCTGTTGATGAAGCCATTGAGTTGAAAAAATCGATGGTTGAGAAGGGATTGACACCTGATAGGTATACATATTCAGTACTAATTGATGGATTGTGCAGACAGAAGAGATCAGAAGAAGCAAAGTTGGTATTGAACGACATGTATGATATAGGTTTGAATCCTGACCGCACCTTGTACATTGCTTTGATTGATGGATTCTTGAAAGAAAATAACGTGGATAAGGCCCTCAGGATCAAAGAAGAGATGGTCGCTCGAGGAGTTAAGTTGTGCGGTGTCACATATAATGTGATTTTTGCAGGGATCTGTAAAATAGGTAAGATGGAGAAGGCAGAATGTCTTTTGAATGAGATGAATGCTATGGGAATTGAACCTAATACCCAGACATATAACTATTTAATTGATGGGTACTGTCGGGAGCAAAATGTAAACAAGGCTTATGCATTACTTAATGAGATGAAGCAAAGGAACTTGACACCCAATGAGGTCACTTGTGGAGTGGTAATCAATGGCCTATGCCGGTCTGGAGATCTACAAGGGGCTAATAATGTTTTGAAGGTAATGATCACTGGGGGTTTGAAACCCGGTAGAGTTATCTACACAACTCTAATAAAAGGTCATCTACAAGAAAGAAAATTTGAAGAGGCTATAAAACTATTGAAGGAAATGAGTGAAAAAGGTGTCATTCCTGATGTCTTTTGCTACAATTCTCTTGTAATTGGCCTGTGCAAAGCGAGGAAATTTGAAGAAGCCAACACTTATTTGGTGGAAATGGTTGAGAGAGGATTAAAGCCTAATGCATATACTTATGGGGCTTTTGTTCACGGGTACTGTAAGGAGAGGGAAATGCAACTCGCGAATTGGTATTTCGAGGAGATGCTAGGTTCTGGTATAGCTCCCAATGAGTTTATCTATACAGCACTGATTGAAGGACACTGCAAAGAGGGTAACTTGGTTGAAGCTCTTTCAACATTTAGATCCATGTTGGGACGCGGGGTGACCCCAGATATCAAAACATACAGTGTCATTATTCATGGTCTCTCCAGGAGAGGAAAACTTGAAGAAGCAATGGGGATCTTCTCTGAGCTCCTTGGCAAGAATTTGGTTCCGGATGTATTTACATACAGCTCTCTCATATCTGGCTTTTGCAAGCAGGGAAATGCAGAGAAGTCTTTCCAACTTCTTGAACAGATGTCTCAGAGAGGTATTAAACCAAACATTGTCACTTACAACGGCTTGATTAATGGATTGTGCAAGTCTGGGGACATTGACAGAGCCAGAGAAGTGTTTGATGCAATTTCAGGAAAGGGTTTAACTCCTAATGCTGTGACTTATGCTACCATGATGGACGGATATAGCAAATCTGGAAAATTAACTGAGGCTTTACAATTATTAGATGAGATGCAACTCCATGGGATTCCTACTGATAGTTTCATTTACTGCACCCTGATTGATGGGTTCTGCATGGCAGGTGATACAGACGAGGCCTTGTCTTTATTTAATGAAGTGGTGGATAAGGGCCTTGCTGCCACTTCTTCTTTCAATGCATTGATTGATGGCTTCTGTAAATTGGGGAAGCAGATGGAAGCCAAACAGTTGTTTGAAGATATGGTGGATAAGCATGTGACACCAAATCATGTTACGTACACGATTCTGATTGATTCTCTCTGCAAAGAGGGCTTGTTGAGGGAATCAGAAGAGCTATTTCTGGAAATGCAGGAAAGGAATCTGCAGGCCAATATTGTAACCTACACTTCGCTTTTGCAGGGCTACAACAGCACAGGAAGCAGAGTAAAGATGTTTGCTCTTTACGAGGAAATGATAGCAAGGGGACTCAAACCTGATGAAATAACCTATGGTCTGATGGTCGAGGCCTATTGTGAAGAAGGTGATGTGGTAAAGTCTCTAAAGCTGGTGGATGAAAGTTTGGTCAATAGTGTTAATTTGAACAGTGATGTGGTAGATGCTCTGGCAAATGCCCTATTCCAAAAGGCAGAATTTTCGAAAGTGATGAAGTCACTTGATGAAATGGGAGAGCAAGGATTTGTGCTCAGTCTTGCTACATGTAAAACATTAGTTCACGGATTTTTCTACAAATCAGGGAATGCAGAGAGGGCAGCAAGGATTCTCGAGAGCATGCTCAGGTTTGGATGGGTTTCGGAGTCCACAAGTATAAGCGACTTAATTAATAATGAAGAACAAAATGAGGCAAGCTCTGGGATTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010033 GO:0010035 GO:0016020 GO:0016043 GO:0016049 GO:0019722 GO:0019899 GO:0019900 GO:0019932 GO:0022414 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0035556 GO:0040007 GO:0042221 GO:0042995 GO:0043167 GO:0043169 GO:0044424 GO:0044464 GO:0044706 GO:0046872 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071840 GO:0071944 GO:0090406 GO:0097305 GO:0097306 GO:0120025 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko04010 ko04020 ko04022 ko04114 ko04218 ko04310 ko04360 ko04370 ko04380 ko04650 ko04658 ko04659 ko04660 ko04662 ko04720 ko04724 ko04921 ko04922 ko04924 ko05010 ko05014 ko05031 ko05152 ko05166 ko05167 map04010 map04020 map04022 map04114 map04218 map04310 map04360 map04370 map04380 map04650 map04658 map04659 map04660 map04662 map04720 map04724 map04921 map04922 map04924 map05010 map05014 map05031 map05152 map05166 map05167
Pfam Domains
Protein Families
EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7 EF-hand_8

Protein Analysis

1021

Amino Acids

114.43

Weight (kDa)

5.91

Isoelectric Point (pI)

28.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 198 - 243 2.1e-09 PPR repeat family
PPR_long PF17177 200 - 307 3.4e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 219 - 274 7.3e-07 Pentatricopeptide repeat domain
PPR PF01535 232 - 262 2e-06 PPR repeat
PPR_2 PF13041 234 - 278 2.7e-11 PPR repeat family
PPR_1 PF12854 260 - 293 7.7e-09 PPR repeat
PPR_2 PF13041 268 - 313 4e-15 PPR repeat family
PPR_1 PF12854 295 - 327 1.1e-08 PPR repeat
PPR_3 PF13812 357 - 416 8.3e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 372 - 418 3.9e-16 PPR repeat family
PPR_1 PF12854 400 - 433 3.5e-12 PPR repeat
PPR_2 PF13041 404 - 453 7.8e-18 PPR repeat family
PPR PF01535 408 - 436 8.9e-07 PPR repeat
PPR_2 PF13041 474 - 523 7e-15 PPR repeat family
PPR PF01535 477 - 507 3.6e-07 PPR repeat
PPR_1 PF12854 505 - 537 3.3e-06 PPR repeat
PPR_2 PF13041 509 - 558 1.4e-13 PPR repeat family
PPR_3 PF13812 535 - 588 1.1e-06 Pentatricopeptide repeat domain
PPR_long PF17177 568 - 676 4.1e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 569 - 624 1.2e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 576 - 607 4.5e-08 PPR repeat
PPR_2 PF13041 579 - 627 3.4e-14 PPR repeat family
PPR PF01535 583 - 612 1.9e-06 PPR repeat
PPR_1 PF12854 610 - 641 2.8e-06 PPR repeat
PPR_2 PF13041 622 - 663 2.6e-11 PPR repeat family
PPR_3 PF13812 638 - 694 1.1e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 645 - 678 2.7e-12 PPR repeat
PPR_2 PF13041 649 - 698 6.3e-19 PPR repeat family
PPR PF01535 652 - 682 2.4e-07 PPR repeat
PPR_long PF17177 666 - 773 1.3e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 673 - 731 1.4e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 680 - 710 1e-12 PPR repeat
PPR_2 PF13041 684 - 733 8.2e-15 PPR repeat family
PPR PF01535 687 - 716 2e-06 PPR repeat
PPR_1 PF12854 715 - 748 5.4e-10 PPR repeat
PPR_2 PF13041 719 - 767 1.7e-13 PPR repeat family
PPR PF01535 722 - 752 9.2e-08 PPR repeat
PPR_1 PF12854 751 - 781 3.1e-08 PPR repeat
PPR PF01535 758 - 787 6.6e-07 PPR repeat
PPR_long PF17177 769 - 915 9e-08 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 778 - 833 6.4e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 790 - 837 5e-16 PPR repeat family
PPR_1 PF12854 792 - 817 1.5e-06 PPR repeat
PPR_1 PF12854 820 - 851 1.1e-10 PPR repeat
PPR PF01535 826 - 855 2e-08 PPR repeat
PPR_2 PF13041 831 - 870 9.9e-09 PPR repeat family
PPR_3 PF13812 847 - 905 4.9e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 859 - 906 9e-11 PPR repeat family
PPR_1 PF12854 889 - 920 2e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 93
AarI CACCTGC 1 cut(s) 2297
Acc36I ACCTGC 1 cut(s) 2297
AccB1I GGYRCC 1 cut(s) 299
AccI GTMKAC 1 cut(s) 905
AccII CGCG 2 cut(s) 1694, 1830
AccIII TCCGGA 1 cut(s) 1945
AciI CCGC 3 cut(s) 1006, 1110, 1830
AclWI GGATC 5 cut(s) 225, 1079, 1148, 1809, 1919
AcsI RAATTY 6 cut(s) 322, 793, 1472, 1577, 1936, 2834
AcuI CTGAAG 1 cut(s) 176
AfaI GTAC 7 cut(s) 148, 802, 918, 1016, 1247, 1667, 2483
AfiI CCNNNNNNNGG 2 cut(s) 223, 421
AflIII ACRYGT 2 cut(s) 978, 2900
AjnI CCWGG 2 cut(s) 252, 1880
AjuI GAANNNNNNNTTGG 2 cut(s) 313, 345
Alw21I GWGCWC 4 cut(s) 191, 318, 1926, 2889
Alw26I GTCTC 3 cut(s) 1880, 2037, 2745
AlwI GGATC 5 cut(s) 225, 1079, 1148, 1809, 1919
Ama87I CYCGRG 2 cut(s) 1092, 2966
Aor13HI TCCGGA 1 cut(s) 1945
AoxI GGCC 8 cut(s) 59, 1062, 1348, 1558, 2322, 2356, 2571, 2709
ApeKI GCWGC 4 cut(s) 112, 539, 2363, 2954
ApoI RAATTY 6 cut(s) 322, 793, 1472, 1577, 1936, 2834
AseI ATTAAT 2 cut(s) 2079, 3024
Asp700I GAANNNNTTC 1 cut(s) 2009
AspS9I GGNCC 4 cut(s) 73, 411, 1063, 2356
AsuC2I CCSGG 2 cut(s) 415, 1422
AsuHPI GGTGA 5 cut(s) 272, 826, 1846, 2321, 2738
AsuII TTCGAA 1 cut(s) 2840
AvaI CYCGRG 2 cut(s) 1092, 2966
AvaII GGWCC 2 cut(s) 73, 411
AxyI CCTNAGG 1 cut(s) 1067
BaeGI GKGCMC 1 cut(s) 304
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 2 cut(s) 191, 1926
BauI CACGAG 1 cut(s) 219
Bbv12I GWGCWC 4 cut(s) 191, 318, 1926, 2889
BbvI GCAGC 4 cut(s) 124, 526, 2350, 2966
BceAI ACGGC 1 cut(s) 2086
BcgI CGANNNNNNTGC 2 cut(s) 2820, 2854
BciT130I CCWGG 2 cut(s) 254, 1882
BclI TGATCA 3 cut(s) 501, 711, 1401
BcnI CCSGG 2 cut(s) 415, 1422
BcoDI GTCTC 3 cut(s) 1880, 2037, 2745
BfaI CTAG 1 cut(s) 1718
BfmI CTRYAG 2 cut(s) 85, 2567
BfuAI ACCTGC 1 cut(s) 2297
BglII AGATCT 1 cut(s) 1366
BisI GCNGC 4 cut(s) 113, 540, 2364, 2955
BlsI GCNGC 4 cut(s) 114, 541, 2365, 2956
BmcAI AGTACT 1 cut(s) 918
Bme1390I CCNGG 4 cut(s) 254, 415, 1422, 1882
Bme18I GGWCC 2 cut(s) 73, 411
BmeT110I CYCGRG 2 cut(s) 1092, 2966
BmgT120I GGNCC 4 cut(s) 73, 411, 1063, 2356
BmiI GGNNCC 4 cut(s) 74, 301, 413, 1944
BmrFI CCNGG 4 cut(s) 254, 415, 1422, 1882
BmrI ACTGGG 1 cut(s) 1416
BmsI GCATC 4 cut(s) 1704, 2119, 2229, 2791
BmuI ACTGGG 1 cut(s) 1416
BplI GAGNNNNNCTC 1 cut(s) 3035
BpmI CTGGAG 2 cut(s) 1383, 1864
Bpu10I CCTNAGC 1 cut(s) 2978
Bpu14I TTCGAA 1 cut(s) 2840
BpuMI CCSGG 2 cut(s) 415, 1422
Bsa29I ATCGAT 1 cut(s) 872
BsaAI YACGTR 1 cut(s) 2481
BsaBI GATNNNNATC 1 cut(s) 500
BsaI GGTCTC 1 cut(s) 1880
BsaJI CCNNGG 3 cut(s) 385, 1927, 2248
BsaWI WCCGGW 1 cut(s) 1945
BsaXI ACNNNNNCTCC 2 cut(s) 167, 197
Bsc4I CCNNNNNNNGG 2 cut(s) 223, 421
Bse118I RCCGGY 2 cut(s) 421, 1356
Bse1I ACTGG 1 cut(s) 1411
Bse21I CCTNAGG 1 cut(s) 1067
Bse3DI GCAATG 3 cut(s) 712, 1017, 1911
Bse8I GATNNNNATC 1 cut(s) 500
BseAI TCCGGA 1 cut(s) 1945
BseBI CCWGG 2 cut(s) 254, 1882
BseCI ATCGAT 1 cut(s) 872
BseDI CCNNGG 3 cut(s) 385, 1927, 2248
BseGI GGATG 7 cut(s) 127, 639, 669, 742, 1954, 2761, 2993
BseJI GATNNNNATC 1 cut(s) 500
BseLI CCNNNNNNNGG 2 cut(s) 223, 421
BseMI GCAATG 3 cut(s) 712, 1017, 1911
BseMII CTCAG 6 cut(s) 1081, 1911, 2048, 2205, 2902, 2992
BseNI ACTGG 1 cut(s) 1411
BseRI GAGGAG 2 cut(s) 1110, 1724
BseSI GKGCMC 1 cut(s) 304
BseXI GCAGC 4 cut(s) 124, 526, 2350, 2966
BsgI GTGCAG 2 cut(s) 955, 2263
Bsh1236I CGCG 2 cut(s) 1694, 1830
BshFI GGCC 8 cut(s) 61, 1064, 1350, 1560, 2324, 2358, 2573, 2711
BshNI GGYRCC 1 cut(s) 299
BshVI ATCGAT 1 cut(s) 872
BsiHKAI GWGCWC 4 cut(s) 191, 318, 1926, 2889
BsiHKCI CYCGRG 2 cut(s) 1092, 2966
BsiSI CCGG 6 cut(s) 415, 422, 686, 1357, 1422, 1946
BslFI GGGAC 3 cut(s) 1839, 2114, 2682
BslI CCNNNNNNNGG 2 cut(s) 223, 421
BsmAI GTCTC 3 cut(s) 1880, 2037, 2745
BsmFI GGGAC 3 cut(s) 1839, 2114, 2682
BsmI GAATGC 4 cut(s) 328, 596, 1198, 2947
BsnI GGCC 8 cut(s) 61, 1064, 1350, 1560, 2324, 2358, 2573, 2711
Bso31I GGTCTC 1 cut(s) 1880
BsoBI CYCGRG 2 cut(s) 1092, 2966
Bsp119I TTCGAA 1 cut(s) 2840
Bsp1286I GDGCHC 5 cut(s) 191, 304, 318, 1926, 2889
Bsp13I TCCGGA 1 cut(s) 1945
Bsp1407I TGTACA 1 cut(s) 1014
Bsp19I CCATGG 2 cut(s) 385, 2248
Bsp68I TCGCGA 1 cut(s) 1694
BspACI CCGC 3 cut(s) 1006, 1110, 1830
BspANI GGCC 8 cut(s) 61, 1064, 1350, 1560, 2324, 2358, 2573, 2711
BspCNI CTCAG 6 cut(s) 1080, 1912, 2047, 2206, 2901, 2991
BspDI ATCGAT 1 cut(s) 872
BspEI TCCGGA 1 cut(s) 1945
BspFNI CGCG 2 cut(s) 1694, 1830
BspLI GGNNCC 4 cut(s) 74, 301, 413, 1944
BspMAI CTGCAG 2 cut(s) 89, 2571
BspMI ACCTGC 1 cut(s) 2297
BspPI GGATC 5 cut(s) 225, 1079, 1148, 1809, 1919
BspQI GCTCTTC 1 cut(s) 2529
BspT104I TTCGAA 1 cut(s) 2840
BspT107I GGYRCC 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 1880
BsrDI GCAATG 3 cut(s) 712, 1017, 1911
BsrFI RCCGGY 2 cut(s) 421, 1356
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 1 cut(s) 1411
BssAI RCCGGY 2 cut(s) 421, 1356
BssECI CCNNGG 3 cut(s) 385, 1927, 2248
BssNAI GTATAC 1 cut(s) 906
BssSI CACGAG 1 cut(s) 219
BssT1I CCWWGG 3 cut(s) 385, 1927, 2248
Bst1107I GTATAC 1 cut(s) 906
Bst2BI CACGAG 1 cut(s) 219
Bst2UI CCWGG 2 cut(s) 254, 1882
Bst4CI ACNGT 7 cut(s) 133, 762, 1250, 1670, 1859, 2433, 2789
Bst6I CTCTTC 4 cut(s) 938, 1074, 1473, 2529
BstAUI TGTACA 1 cut(s) 1014
BstBAI YACGTR 1 cut(s) 2481
BstBI TTCGAA 1 cut(s) 2840
BstC8I GCNNGC 6 cut(s) 381, 423, 1988, 2571, 2975, 3049
BstDEI CTNAG 7 cut(s) 675, 1067, 1920, 2034, 2214, 2888, 2978
BstDSI CCRYGG 2 cut(s) 385, 2248
BstEII GGTNACC 2 cut(s) 260, 1834
BstF5I GGATG 7 cut(s) 127, 639, 669, 742, 1954, 2761, 2993
BstFNI CGCG 2 cut(s) 1694, 1830
BstMAI GTCTC 3 cut(s) 1880, 2037, 2745
BstMWI GCNNNNNNNGC 5 cut(s) 376, 2514, 2613, 2622, 2951
BstNI CCWGG 2 cut(s) 254, 1882
BstNSI RCATGY 5 cut(s) 383, 982, 2462, 2904, 2977
BstPI GGTNACC 2 cut(s) 260, 1834
BstSCI CCNGG 4 cut(s) 252, 413, 1420, 1880
BstSFI CTRYAG 2 cut(s) 85, 2567
BstSLI GKGCMC 1 cut(s) 304
BstSNI TACGTA 1 cut(s) 2481
BstUI CGCG 2 cut(s) 1694, 1830
BstV1I GCAGC 4 cut(s) 124, 526, 2350, 2966
BstX2I RGATCY 4 cut(s) 1140, 1366, 1814, 1911
BstXI CCANNNNNNTGG 1 cut(s) 257
BstYI RGATCY 4 cut(s) 1140, 1366, 1814, 1911
BstZ17I GTATAC 1 cut(s) 906
Bsu15I ATCGAT 1 cut(s) 872
Bsu36I CCTNAGG 1 cut(s) 1067
BsuRI GGCC 8 cut(s) 61, 1064, 1350, 1560, 2324, 2358, 2573, 2711
BsuTUI ATCGAT 1 cut(s) 872
BtgI CCRYGG 2 cut(s) 385, 2248
BtsCI GGATG 7 cut(s) 127, 639, 669, 742, 1954, 2761, 2993
BtsI GCAGTG 1 cut(s) 1771
BtsIMutI CAGTG 6 cut(s) 138, 1404, 1757, 1771, 1864, 2794
BtuMI TCGCGA 1 cut(s) 1694
BveI ACCTGC 1 cut(s) 2297
Cac8I GCNNGC 6 cut(s) 381, 423, 1988, 2571, 2975, 3049
Cfr10I RCCGGY 2 cut(s) 421, 1356
Cfr13I GGNCC 4 cut(s) 73, 411, 1063, 2356
ClaI ATCGAT 1 cut(s) 872
CseI GACGC 1 cut(s) 1836
CsiI ACCWGGT 1 cut(s) 252
Csp6I GTAC 7 cut(s) 147, 801, 917, 1015, 1246, 1666, 2482
CviQI GTAC 7 cut(s) 147, 801, 917, 1015, 1246, 1666, 2482
DdeI CTNAG 7 cut(s) 675, 1067, 1920, 2034, 2214, 2888, 2978
Eam1104I CTCTTC 4 cut(s) 938, 1074, 1473, 2529
EarI CTCTTC 4 cut(s) 938, 1074, 1473, 2529
Ecl136II GAGCTC 2 cut(s) 189, 1924
Eco105I TACGTA 1 cut(s) 2481
Eco130I CCWWGG 3 cut(s) 385, 1927, 2248
Eco147I AGGCCT 3 cut(s) 61, 2324, 2711
Eco24I GRGCYC 2 cut(s) 191, 1926
Eco31I GGTCTC 1 cut(s) 1880
Eco32I GATATC 1 cut(s) 1846
Eco47I GGWCC 2 cut(s) 73, 411
Eco53kI GAGCTC 2 cut(s) 189, 1924
Eco57I CTGAAG 1 cut(s) 176
Eco81I CCTNAGG 1 cut(s) 1067
Eco88I CYCGRG 2 cut(s) 1092, 2966
Eco91I GGTNACC 2 cut(s) 260, 1834
EcoICRI GAGCTC 2 cut(s) 189, 1924
EcoO109I RGGNCCY 3 cut(s) 411, 1063, 2356
EcoO65I GGTNACC 2 cut(s) 260, 1834
EcoRII CCWGG 2 cut(s) 252, 1880
EcoRV GATATC 1 cut(s) 1846
EcoT14I CCWWGG 3 cut(s) 385, 1927, 2248
EcoT22I ATGCAT 3 cut(s) 1282, 1639, 2386
EcoT38I GRGCYC 2 cut(s) 191, 1926
ErhI CCWWGG 3 cut(s) 385, 1927, 2248
FaqI GGGAC 3 cut(s) 1839, 2114, 2682
FauI CCCGC 1 cut(s) 1823
FbaI TGATCA 3 cut(s) 501, 711, 1401
FblI GTMKAC 1 cut(s) 905
Fnu4HI GCNGC 4 cut(s) 113, 540, 2364, 2955
FokI GGATG 7 cut(s) 134, 646, 676, 749, 1961, 2768, 3000
FriOI GRGCYC 2 cut(s) 191, 1926
Fsp4HI GCNGC 4 cut(s) 113, 540, 2364, 2955
FspBI CTAG 1 cut(s) 1718
GluI GCNGC 4 cut(s) 113, 540, 2364, 2955
GsuI CTGGAG 2 cut(s) 1383, 1864
HaeIII GGCC 8 cut(s) 61, 1064, 1350, 1560, 2324, 2358, 2573, 2711
HapII CCGG 6 cut(s) 415, 422, 686, 1357, 1422, 1946
HgaI GACGC 1 cut(s) 1836
HindIII AAGCTT 1 cut(s) 368
HpaII CCGG 6 cut(s) 415, 422, 686, 1357, 1422, 1946
HphI GGTGA 5 cut(s) 272, 826, 1846, 2321, 2738
Hpy166II GTNNAC 8 cut(s) 76, 513, 906, 1267, 1660, 2484, 2917, 3003
Hpy8I GTNNAC 8 cut(s) 76, 513, 906, 1267, 1660, 2484, 2917, 3003
HpyCH4III ACNGT 7 cut(s) 133, 762, 1250, 1670, 1859, 2433, 2789
HpyCH4IV ACGT 2 cut(s) 1053, 2480
HpyF10VI GCNNNNNNNGC 5 cut(s) 376, 2514, 2613, 2622, 2951
HpyF3I CTNAG 7 cut(s) 675, 1067, 1920, 2034, 2214, 2888, 2978
HpySE526I ACGT 2 cut(s) 1053, 2480
Kpn2I TCCGGA 1 cut(s) 1945
KroI GCCGGC 1 cut(s) 421
KroNI GCCGGC 1 cut(s) 423
Ksp22I TGATCA 3 cut(s) 501, 711, 1401
LguI GCTCTTC 1 cut(s) 2529
LmnI GCTCC 4 cut(s) 321, 1255, 1738, 1929
Lsp1109I GCAGC 4 cut(s) 124, 526, 2350, 2966
LweI GCATC 4 cut(s) 1704, 2119, 2229, 2791
MabI ACCWGGT 1 cut(s) 252
MaeI CTAG 1 cut(s) 1718
MaeII ACGT 2 cut(s) 1053, 2480
MfeI CAATTG 1 cut(s) 305
MflI RGATCY 4 cut(s) 1140, 1366, 1814, 1911
MhlI GDGCHC 5 cut(s) 191, 304, 318, 1926, 2889
MlyI GAGTC 3 cut(s) 185, 2664, 3008
MmeI TCCRAC 2 cut(s) 375, 2038
Mph1103I ATGCAT 3 cut(s) 1282, 1639, 2386
MroI TCCGGA 1 cut(s) 1945
MroNI GCCGGC 1 cut(s) 421
MroXI GAANNNNTTC 1 cut(s) 2009
MslI CAYNNNNRTG 1 cut(s) 384
MspI CCGG 6 cut(s) 415, 422, 686, 1357, 1422, 1946
MspR9I CCNGG 4 cut(s) 254, 415, 1422, 1882
MunI CAATTG 1 cut(s) 305
Mva1269I GAATGC 4 cut(s) 328, 596, 1198, 2947
MvaI CCWGG 2 cut(s) 254, 1882
MvnI CGCG 2 cut(s) 1694, 1830
MwoI GCNNNNNNNGC 5 cut(s) 376, 2514, 2613, 2622, 2951
NaeI GCCGGC 1 cut(s) 423
NciI CCSGG 2 cut(s) 415, 1422
NcoI CCATGG 2 cut(s) 385, 2248
NgoMIV GCCGGC 1 cut(s) 421
NlaIV GGNNCC 4 cut(s) 74, 301, 413, 1944
NmeAIII GCCGAG 1 cut(s) 606
NmuCI GTSAC 8 cut(s) 260, 1114, 1324, 1834, 2059, 2164, 2461, 2853
NruI TCGCGA 1 cut(s) 1694
NsiI ATGCAT 3 cut(s) 1282, 1639, 2386
NspI RCATGY 5 cut(s) 383, 982, 2462, 2904, 2977
NspV TTCGAA 1 cut(s) 2840
PacI TTAATTAA 1 cut(s) 3024
PaeI GCATGC 2 cut(s) 383, 2977
PaeR7I CTCGAG 2 cut(s) 1092, 2966
PaqCI CACCTGC 1 cut(s) 2297
PceI AGGCCT 3 cut(s) 61, 2324, 2711
PciI ACATGT 2 cut(s) 978, 2900
PciSI GCTCTTC 1 cut(s) 2529
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PctI GAATGC 4 cut(s) 328, 596, 1198, 2947
PdiI GCCGGC 1 cut(s) 423
PdmI GAANNNNTTC 1 cut(s) 2009
PfeI GAWTC 9 cut(s) 67, 997, 1035, 2254, 2488, 2498, 2528, 2563, 2962
PfoI TCCNGGA 1 cut(s) 1880
PkrI GCNGC 4 cut(s) 114, 541, 2365, 2956
PleI GAGTC 3 cut(s) 184, 2664, 3007
PpsI GAGTC 3 cut(s) 184, 2664, 3007
Ppu21I YACGTR 1 cut(s) 2481
PpuMI RGGWCCY 1 cut(s) 411
PscI ACATGT 2 cut(s) 978, 2900
PshBI ATTAAT 2 cut(s) 2079, 3024
PsiI TTATAA 1 cut(s) 93
Psp124BI GAGCTC 2 cut(s) 191, 1926
Psp5II RGGWCCY 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 252, 1880
PspEI GGTNACC 2 cut(s) 260, 1834
PspGI CCWGG 2 cut(s) 252, 1880
PspN4I GGNNCC 4 cut(s) 74, 301, 413, 1944
PspPI GGNCC 4 cut(s) 73, 411, 1063, 2356
PspPPI RGGWCCY 1 cut(s) 411
PspXI VCTCGAGB 1 cut(s) 1092
PstI CTGCAG 2 cut(s) 89, 2571
PsuI RGATCY 4 cut(s) 1140, 1366, 1814, 1911
RruI TCGCGA 1 cut(s) 1694
RsaI GTAC 7 cut(s) 148, 802, 918, 1016, 1247, 1667, 2483
RsaNI GTAC 7 cut(s) 147, 801, 917, 1015, 1246, 1666, 2482
RseI CAYNNNNRTG 1 cut(s) 384
SacI GAGCTC 2 cut(s) 191, 1926
SapI GCTCTTC 1 cut(s) 2529
SatI GCNGC 4 cut(s) 113, 540, 2364, 2955
Sau96I GGNCC 4 cut(s) 73, 411, 1063, 2356
ScaI AGTACT 1 cut(s) 918
SchI GAGTC 3 cut(s) 185, 2664, 3008
ScrFI CCNGG 4 cut(s) 254, 415, 1422, 1882
SduI GDGCHC 5 cut(s) 191, 304, 318, 1926, 2889
SexAI ACCWGGT 1 cut(s) 252
SfaNI GCATC 4 cut(s) 1704, 2119, 2229, 2791
SfcI CTRYAG 2 cut(s) 85, 2567
Sfr274I CTCGAG 2 cut(s) 1092, 2966
SfuI TTCGAA 1 cut(s) 2840
SinI GGWCC 2 cut(s) 73, 411
SlaI CTCGAG 2 cut(s) 1092, 2966
SmiMI CAYNNNNRTG 1 cut(s) 384
SmlI CTYRAG 2 cut(s) 1092, 2966
SmoI CTYRAG 2 cut(s) 1092, 2966
SnaBI TACGTA 1 cut(s) 2481
SphI GCATGC 2 cut(s) 383, 2977
SseBI AGGCCT 3 cut(s) 61, 2324, 2711
SsiI CCGC 3 cut(s) 1006, 1110, 1830
SspI AATATT 1 cut(s) 2578
SspMI CTAG 1 cut(s) 1718
SstI GAGCTC 2 cut(s) 191, 1926
StuI AGGCCT 3 cut(s) 61, 2324, 2711
StyD4I CCNGG 4 cut(s) 252, 413, 1420, 1880
StyI CCWWGG 3 cut(s) 385, 1927, 2248
TaaI ACNGT 7 cut(s) 133, 762, 1250, 1670, 1859, 2433, 2789
TaiI ACGT 2 cut(s) 1056, 2483
TaqI TCGA 8 cut(s) 229, 338, 872, 1093, 1707, 2706, 2840, 2967
TatI WGTACW 2 cut(s) 916, 1014
TfiI GAWTC 9 cut(s) 67, 997, 1035, 2254, 2488, 2498, 2528, 2563, 2962
TscAI CASTG 6 cut(s) 138, 1411, 1764, 1778, 1864, 2794
TseFI GTSAC 8 cut(s) 260, 1114, 1324, 1834, 2059, 2164, 2461, 2853
TseI GCWGC 4 cut(s) 112, 539, 2363, 2954
Tsp45I GTSAC 8 cut(s) 260, 1114, 1324, 1834, 2059, 2164, 2461, 2853
TspGWI ACGGA 4 cut(s) 169, 223, 2202, 2934
TspRI CASTG 6 cut(s) 138, 1411, 1764, 1778, 1864, 2794
VpaK11BI GGWCC 2 cut(s) 73, 411
VspI ATTAAT 2 cut(s) 2079, 3024
XapI RAATTY 6 cut(s) 322, 793, 1472, 1577, 1936, 2834
XceI RCATGY 5 cut(s) 383, 982, 2462, 2904, 2977
XcmI CCANNNNNNNNNTGG 1 cut(s) 1597
XhoI CTCGAG 2 cut(s) 1092, 2966
XmiI GTMKAC 1 cut(s) 905
XmnI GAANNNNTTC 1 cut(s) 2009
XspI CTAG 1 cut(s) 1718
ZrmI AGTACT 1 cut(s) 918
Zsp2I ATGCAT 3 cut(s) 1282, 1639, 2386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.