Rh7DG231900

Calcineurin B-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
22960305 .. 22963314
3010 bp
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UTR
Exon/CDS
Intron
Rh7DG231900.1

Sequence Viewer

Length: 522 bp
ATGGGGTGCTTTACTTCTAAAGGGAAACGGCAGTTTCCAGGATACGAGGATCCTGTCTCCCTCGCTTCACAAACAGCATTTACTGTTAGTGAAGTTGAAGCACTCTTTGAGCTATATAAGAGTATCAGCAGTTCTGTGATTGATGATGGATTGATAAACAAGGAAGAGTTCCAGTTAGCCATTTTCAAGAATAGAAAGAAAGAAAATTTGTTTGCAAATCGGCTCTATGACTTGGATAACACGGGCTTTATTGAGCGCCAAGAGGTCAAGCAAATGTTAATTGCACTTCTTTGTGAATCTGAAATGAAACTGGCAGATGACACCATCGAGTTAATTCTTGATAAGACTTTCATGGAAGCTGATGTGAACCAAGATGGGAAAATAGACTTTTCTGAGTGGAAAAATTTTGTTTCAAAGAATCCATCATTGTTAAAGATCATGACCCTCCCCTACCTTAGGGATATTACCACCACATTTCCAAGTTTTGTATTTAATTCAGAGGTTGATGAGATTGCTACGTGA
Functional Annotation

Protein Analysis

173

Amino Acids

19.8

Weight (kDa)

4.57

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_7 PF13499 74 - 136 8.9e-09 EF-hand domain pair
EF-hand_1 PF00036 113 - 139 2.6e-07 EF hand domain
EF-hand_5 PF13202 113 - 137 5.4e-08 EF hand
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 44, 57
AcsI RAATTY 2 cut(s) 205, 403
AfiI CCNNNNNNNGG 1 cut(s) 456
AgsI TTSAA 3 cut(s) 98, 187, 414
AjnI CCWGG 1 cut(s) 37
AluBI AGCT 2 cut(s) 112, 359
AluI AGCT 2 cut(s) 112, 359
Alw26I GTCTC 1 cut(s) 61
AlwI GGATC 2 cut(s) 44, 57
ApoI RAATTY 2 cut(s) 205, 403
AspLEI GCGC 1 cut(s) 258
AxyI CCTNAGG 1 cut(s) 455
BamHI GGATCC 1 cut(s) 49
BccI CCATC 4 cut(s) 140, 332, 368, 430
BceAI ACGGC 1 cut(s) 44
BciT130I CCWGG 1 cut(s) 39
BciVI GTATCC 1 cut(s) 35
BcoDI GTCTC 1 cut(s) 61
BfoI RGCGCY 1 cut(s) 259
BfuI GTATCC 1 cut(s) 35
Bme1390I CCNGG 1 cut(s) 39
BmiI GGNNCC 1 cut(s) 51
BmrFI CCNGG 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 519
Bsc4I CCNNNNNNNGG 1 cut(s) 456
Bse1I ACTGG 2 cut(s) 172, 315
Bse21I CCTNAGG 1 cut(s) 455
BseBI CCWGG 1 cut(s) 39
BseLI CCNNNNNNNGG 1 cut(s) 456
BseMII CTCAG 1 cut(s) 384
BseNI ACTGG 2 cut(s) 172, 315
BslI CCNNNNNNNGG 1 cut(s) 456
BsmAI GTCTC 1 cut(s) 61
Bsp143I GATC 2 cut(s) 49, 435
BspCNI CTCAG 1 cut(s) 385
BspHI TCATGA 1 cut(s) 438
BspLI GGNNCC 1 cut(s) 51
BspPI GGATC 2 cut(s) 44, 57
BsrI ACTGG 2 cut(s) 172, 315
BssMI GATC 2 cut(s) 49, 435
Bst2UI CCWGG 1 cut(s) 39
Bst4CI ACNGT 1 cut(s) 85
Bst6I CTCTTC 1 cut(s) 159
BstBAI YACGTR 1 cut(s) 519
BstDEI CTNAG 2 cut(s) 393, 455
BstENI CCTNNNNNAGG 1 cut(s) 454
BstH2I RGCGCY 1 cut(s) 259
BstHHI GCGC 1 cut(s) 258
BstKTI GATC 2 cut(s) 52, 438
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 2 cut(s) 49, 435
BstNI CCWGG 1 cut(s) 39
BstSCI CCNGG 1 cut(s) 37
BstX2I RGATCY 1 cut(s) 49
BstYI RGATCY 1 cut(s) 49
Bsu36I CCTNAGG 1 cut(s) 455
BsuI GTATCC 1 cut(s) 35
CciI TCATGA 1 cut(s) 438
CfoI GCGC 1 cut(s) 258
CviAII CATG 2 cut(s) 352, 439
CviJI RGCY 5 cut(s) 112, 179, 223, 246, 359
CviKI_1 RGCY 5 cut(s) 112, 179, 223, 246, 359
DdeI CTNAG 2 cut(s) 393, 455
DpnI GATC 2 cut(s) 51, 437
DpnII GATC 2 cut(s) 49, 435
Eam1104I CTCTTC 1 cut(s) 159
EarI CTCTTC 1 cut(s) 159
Eco81I CCTNAGG 1 cut(s) 455
EcoNI CCTNNNNNAGG 1 cut(s) 454
EcoRII CCWGG 1 cut(s) 37
FaeI CATG 2 cut(s) 355, 442
FaiI YATR 5 cut(s) 115, 117, 228, 353, 440
FatI CATG 2 cut(s) 351, 438
GlaI GCGC 1 cut(s) 257
HaeII RGCGCY 1 cut(s) 259
HhaI GCGC 1 cut(s) 258
Hin1II CATG 2 cut(s) 355, 442
Hin6I GCGC 1 cut(s) 256
HinP1I GCGC 1 cut(s) 256
HinfI GANTC 2 cut(s) 296, 418
Hpy166II GTNNAC 1 cut(s) 367
Hpy188I TCNGA 3 cut(s) 301, 394, 499
Hpy188III TCNNGA 3 cut(s) 187, 338, 439
Hpy8I GTNNAC 1 cut(s) 367
HpyCH4III ACNGT 1 cut(s) 85
HpyCH4IV ACGT 1 cut(s) 518
HpyCH4V TGCA 2 cut(s) 215, 284
HpyF3I CTNAG 2 cut(s) 393, 455
HpySE526I ACGT 1 cut(s) 518
Hsp92II CATG 2 cut(s) 355, 442
HspAI GCGC 1 cut(s) 256
Kzo9I GATC 2 cut(s) 49, 435
LpnPI CCDG 5 cut(s) 24, 51, 66, 185, 296
MaeII ACGT 1 cut(s) 518
MalI GATC 2 cut(s) 51, 437
MboI GATC 2 cut(s) 49, 435
MboII GAAGA 1 cut(s) 176
MflI RGATCY 1 cut(s) 49
MluCI AATT 5 cut(s) 205, 279, 333, 403, 493
MnlI CCTC 5 cut(s) 40, 71, 256, 455, 493
MseI TTAA 4 cut(s) 278, 332, 431, 492
MspR9I CCNGG 1 cut(s) 39
MvaI CCWGG 1 cut(s) 39
NdeII GATC 2 cut(s) 49, 435
NlaIII CATG 2 cut(s) 355, 442
NlaIV GGNNCC 1 cut(s) 51
PagI TCATGA 1 cut(s) 438
PfeI GAWTC 2 cut(s) 296, 418
PfoI TCCNGGA 1 cut(s) 37
Ppu21I YACGTR 1 cut(s) 519
Psp6I CCWGG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 37
PspN4I GGNNCC 1 cut(s) 51
PsrI GAACNNNNNNTAC 2 cut(s) 115, 147
PsuI RGATCY 1 cut(s) 49
SaqAI TTAA 4 cut(s) 278, 332, 431, 492
Sau3AI GATC 2 cut(s) 49, 435
ScrFI CCNGG 1 cut(s) 39
SetI ASST 6 cut(s) 114, 267, 361, 456, 504, 521
Sse9I AATT 5 cut(s) 205, 279, 333, 403, 493
StyD4I CCNGG 1 cut(s) 37
TaaI ACNGT 1 cut(s) 85
TaiI ACGT 1 cut(s) 521
TaqI TCGA 1 cut(s) 327
TasI AATT 5 cut(s) 205, 279, 333, 403, 493
TfiI GAWTC 2 cut(s) 296, 418
Tru1I TTAA 4 cut(s) 278, 332, 431, 492
Tru9I TTAA 4 cut(s) 278, 332, 431, 492
TspDTI ATGAA 2 cut(s) 320, 340
XagI CCTNNNNNAGG 1 cut(s) 454
XapI RAATTY 2 cut(s) 205, 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.