Rh7CG238800

Calcineurin B-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0004274
Physical Location & Seq
Forward (+)
22342255 .. 22346660
4406 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG238800.1

Sequence Viewer

Length: 663 bp
ATGGGGTGCTTTACTTCTAAAGGGAAACGGCAGTTTCCAGGATACGAGGATCCTGTCTCCCTCGCTTCACAAACAGCATTTACTGTTAGTGAAGTTGAAGCACTCTTTGAGCTATATAAGAGTATCAGCAGTTCTGTGATTGATGATGGATTGATAAACAAGGAAGAGTTCCAGTTAGCCATTTTCAAGAATAGAAAGAAAGAAAATTTGTTTGCAAATCGGATATTTGATCTATTTGATGTGAAGAGGAAGGGTGTCATTGATTTCAATGACTTTGTTAGATCACTGACTGTCTTCCATCCCAATGCCCCACAAGAAGACAAGATCGATTTTTCATTTAAGCTCTATGACTTGGATAACACGGGCTTTATTGAGCGCCAAGAGGTCAAGCAAATGTTAATTGCACTTCTTTGTGAATCTGAAATGAAACTGGCAGATGACACCATCGAGTTAATTCTTGATAAGACTTTCATGGAAGCTGATGTGAACCAAGATGGGAAAATAGACTTTTCTGAGTGGAAAAATTTTGTTTCAAAGAATCCATCATTGTTAAAGATCATGACCCTCCCCTACCTTAGGTATGAGGCTTATTTTTGCCATCTATTCACAAATATAAATTTTCCAGAGTTTCTGAAATTCTCATTTACCATCTATCTGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010033 GO:0010035 GO:0016020 GO:0016043 GO:0016049 GO:0019722 GO:0019899 GO:0019900 GO:0019932 GO:0022414 GO:0023052 GO:0030154 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0035556 GO:0040007 GO:0042221 GO:0042995 GO:0043167 GO:0043169 GO:0044424 GO:0044464 GO:0044706 GO:0046872 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071840 GO:0071944 GO:0090406 GO:0097305 GO:0097306 GO:0120025 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko04010 ko04020 ko04022 ko04114 ko04218 ko04310 ko04360 ko04370 ko04380 ko04650 ko04658 ko04659 ko04660 ko04662 ko04720 ko04724 ko04921 ko04922 ko04924 ko05010 ko05014 ko05031 ko05152 ko05166 ko05167 map04010 map04020 map04022 map04114 map04218 map04310 map04360 map04370 map04380 map04650 map04658 map04659 map04660 map04662 map04720 map04724 map04921 map04922 map04924 map05010 map05014 map05031 map05152 map05166 map05167
Pfam Domains
Protein Families
EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7 EF-hand_8

Protein Analysis

220

Amino Acids

25.68

Weight (kDa)

4.94

Isoelectric Point (pI)

34.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_7 PF13499 106 - 176 3.4e-10 EF-hand domain pair
EF-hand_1 PF00036 153 - 179 3.7e-07 EF hand domain
EF-hand_5 PF13202 153 - 177 7.6e-08 EF hand
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 44, 57
AcsI RAATTY 4 cut(s) 205, 523, 616, 635
AfiI CCNNNNNNNGG 1 cut(s) 576
AgsI TTSAA 4 cut(s) 98, 187, 268, 534
AjnI CCWGG 1 cut(s) 37
AluBI AGCT 3 cut(s) 112, 343, 479
AluI AGCT 3 cut(s) 112, 343, 479
Alw26I GTCTC 1 cut(s) 61
AlwI GGATC 2 cut(s) 44, 57
ApoI RAATTY 4 cut(s) 205, 523, 616, 635
AspLEI GCGC 1 cut(s) 378
AxyI CCTNAGG 1 cut(s) 575
BamHI GGATCC 1 cut(s) 49
BbsI GAAGAC 2 cut(s) 286, 324
BccI CCATC 7 cut(s) 140, 306, 452, 488, 550, 606, 656
BceAI ACGGC 1 cut(s) 44
BciT130I CCWGG 1 cut(s) 39
BciVI GTATCC 1 cut(s) 35
BcoDI GTCTC 1 cut(s) 61
BfoI RGCGCY 1 cut(s) 379
BfuI GTATCC 1 cut(s) 35
Bme1390I CCNGG 1 cut(s) 39
BmiI GGNNCC 1 cut(s) 51
BmrFI CCNGG 1 cut(s) 39
BpiI GAAGAC 2 cut(s) 286, 324
Bsa29I ATCGAT 1 cut(s) 327
Bsc4I CCNNNNNNNGG 1 cut(s) 576
Bse1I ACTGG 2 cut(s) 172, 435
Bse21I CCTNAGG 1 cut(s) 575
BseBI CCWGG 1 cut(s) 39
BseCI ATCGAT 1 cut(s) 327
BseGI GGATG 1 cut(s) 298
BseLI CCNNNNNNNGG 1 cut(s) 576
BseMII CTCAG 1 cut(s) 504
BseNI ACTGG 2 cut(s) 172, 435
BshVI ATCGAT 1 cut(s) 327
BslI CCNNNNNNNGG 1 cut(s) 576
BsmAI GTCTC 1 cut(s) 61
Bsp143I GATC 5 cut(s) 49, 229, 281, 324, 555
BspCNI CTCAG 1 cut(s) 505
BspDI ATCGAT 1 cut(s) 327
BspHI TCATGA 1 cut(s) 558
BspLI GGNNCC 1 cut(s) 51
BspPI GGATC 2 cut(s) 44, 57
BsrI ACTGG 2 cut(s) 172, 435
BssMI GATC 5 cut(s) 49, 229, 281, 324, 555
Bst2UI CCWGG 1 cut(s) 39
Bst4CI ACNGT 2 cut(s) 85, 292
Bst6I CTCTTC 2 cut(s) 159, 239
BstDEI CTNAG 2 cut(s) 513, 575
BstENI CCTNNNNNAGG 1 cut(s) 574
BstF5I GGATG 1 cut(s) 298
BstH2I RGCGCY 1 cut(s) 379
BstHHI GCGC 1 cut(s) 378
BstKTI GATC 5 cut(s) 52, 232, 284, 327, 558
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 5 cut(s) 49, 229, 281, 324, 555
BstNI CCWGG 1 cut(s) 39
BstSCI CCNGG 1 cut(s) 37
BstV2I GAAGAC 2 cut(s) 286, 324
BstX2I RGATCY 1 cut(s) 49
BstYI RGATCY 1 cut(s) 49
Bsu15I ATCGAT 1 cut(s) 327
Bsu36I CCTNAGG 1 cut(s) 575
BsuI GTATCC 1 cut(s) 35
BsuTUI ATCGAT 1 cut(s) 327
BtsCI GGATG 1 cut(s) 298
BtsIMutI CAGTG 1 cut(s) 284
CciI TCATGA 1 cut(s) 558
CfoI GCGC 1 cut(s) 378
ClaI ATCGAT 1 cut(s) 327
CviAII CATG 2 cut(s) 472, 559
CviJI RGCY 6 cut(s) 112, 179, 343, 366, 479, 587
CviKI_1 RGCY 6 cut(s) 112, 179, 343, 366, 479, 587
DdeI CTNAG 2 cut(s) 513, 575
DpnI GATC 5 cut(s) 51, 231, 283, 326, 557
DpnII GATC 5 cut(s) 49, 229, 281, 324, 555
Eam1104I CTCTTC 2 cut(s) 159, 239
EarI CTCTTC 2 cut(s) 159, 239
Eco81I CCTNAGG 1 cut(s) 575
EcoNI CCTNNNNNAGG 1 cut(s) 574
EcoRII CCWGG 1 cut(s) 37
FaeI CATG 2 cut(s) 475, 562
FaiI YATR 7 cut(s) 115, 117, 348, 473, 560, 582, 614
FatI CATG 2 cut(s) 471, 558
FokI GGATG 1 cut(s) 285
GlaI GCGC 1 cut(s) 377
HaeII RGCGCY 1 cut(s) 379
HhaI GCGC 1 cut(s) 378
Hin1II CATG 2 cut(s) 475, 562
Hin6I GCGC 1 cut(s) 376
HinP1I GCGC 1 cut(s) 376
HinfI GANTC 2 cut(s) 416, 538
Hpy166II GTNNAC 1 cut(s) 487
Hpy188I TCNGA 5 cut(s) 222, 421, 514, 633, 657
Hpy188III TCNNGA 4 cut(s) 187, 458, 559, 623
Hpy8I GTNNAC 1 cut(s) 487
HpyAV CCTTC 1 cut(s) 244
HpyCH4III ACNGT 2 cut(s) 85, 292
HpyCH4V TGCA 2 cut(s) 215, 404
HpyF3I CTNAG 2 cut(s) 513, 575
Hsp92II CATG 2 cut(s) 475, 562
HspAI GCGC 1 cut(s) 376
Kzo9I GATC 5 cut(s) 49, 229, 281, 324, 555
LpnPI CCDG 6 cut(s) 24, 51, 66, 185, 416, 636
MalI GATC 5 cut(s) 51, 231, 283, 326, 557
MboI GATC 5 cut(s) 49, 229, 281, 324, 555
MboII GAAGA 4 cut(s) 176, 256, 286, 329
MflI RGATCY 1 cut(s) 49
MluCI AATT 7 cut(s) 205, 399, 453, 523, 616, 635, 658
MnlI CCTC 6 cut(s) 40, 71, 240, 376, 575, 577
MseI TTAA 4 cut(s) 339, 398, 452, 551
MslI CAYNNNNRTG 1 cut(s) 303
MspR9I CCNGG 1 cut(s) 39
MvaI CCWGG 1 cut(s) 39
NdeII GATC 5 cut(s) 49, 229, 281, 324, 555
NlaIII CATG 2 cut(s) 475, 562
NlaIV GGNNCC 1 cut(s) 51
PagI TCATGA 1 cut(s) 558
PfeI GAWTC 2 cut(s) 416, 538
PfoI TCCNGGA 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 37
PspN4I GGNNCC 1 cut(s) 51
PsrI GAACNNNNNNTAC 2 cut(s) 115, 147
PsuI RGATCY 1 cut(s) 49
RseI CAYNNNNRTG 1 cut(s) 303
SaqAI TTAA 4 cut(s) 339, 398, 452, 551
Sau3AI GATC 5 cut(s) 49, 229, 281, 324, 555
ScrFI CCNGG 1 cut(s) 39
SetI ASST 6 cut(s) 114, 345, 387, 481, 576, 581
SmiMI CAYNNNNRTG 1 cut(s) 303
Sse9I AATT 7 cut(s) 205, 399, 453, 523, 616, 635, 658
StyD4I CCNGG 1 cut(s) 37
TaaI ACNGT 2 cut(s) 85, 292
TaqI TCGA 2 cut(s) 327, 447
TasI AATT 7 cut(s) 205, 399, 453, 523, 616, 635, 658
TfiI GAWTC 2 cut(s) 416, 538
Tru1I TTAA 4 cut(s) 339, 398, 452, 551
Tru9I TTAA 4 cut(s) 339, 398, 452, 551
TscAI CASTG 1 cut(s) 291
TspDTI ATGAA 3 cut(s) 324, 440, 460
TspRI CASTG 1 cut(s) 291
XagI CCTNNNNNAGG 1 cut(s) 574
XapI RAATTY 4 cut(s) 205, 523, 616, 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.