Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0012678

Physical Location & Seq

Genomic Coordinates Reverse (-)

5354109 .. 5361508

Gene Structure 7400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG029500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGGGAGCTGGAAGGAAGACACAAACCTTTATTATGCCTCCTAATGCAGACCTGGCACCCTACTCTGTACAAGCAAGACAGTTGAGAAGTAATCACCTTGGTGGAGTTATCTTTGGTTGCAAGAGCATCACAATGATGGAGTGTATATCTAAACAACTCTTTGGTTTACCGGGTCCACACTTTTCATATGTGAAGAATATTAGACCTGGCTTGCCCCTCTTTCTCTTCAACTGTAATGATAGTACGCTTCATGGAATTTATGAGGCTGCTGGGCATGGCCAAATGAATATTGATCCATATGGTTGGACAACTGATGGATCAGTGAGAACACAATTTCCTGCACAGGTTCAAATTCGCATCCGGCTGCAGTGCAAACCACTGCTTGAAAGTCAATTTAAACCAATTATTGCAGACAACTACTATAGTGCAAATAAATTCTGGTTTGAGCTTGATCATGCTGAGACAAACAAGCTGATGTCGTTGTTAGCATCTTGCGCGGTTGCACAATCTCTCCAGGTACTTCTGTACCGCAGAAAATACCAAAGAGGAAAACTGATCTTCCAACGCAACCCTCACTTGGTTCAAGAGGTAGAAGAGCTAAAGGCTTTCAAGAATGAACAAACTAAGAAGATAGGCTATTTGGAGTATAAGCTGGAGCAGGCACAGTCTGAGATTAAACAGTTAAAAGATGATATGAAGTTTGAATCTGAGTCTACACCATCCCTTGCACATATTGATGAAAAGCAGGCAGAGTCTGAAACTAAGTTAAAAGACGGTATGAAGTTGGAATCCGAGTCTGTACCCTCCACACAAGAGAAGGATTATGCATTGTGTGATATGCTGGATGTGGATCCTAATGAGTCAATATATCAAGTCCGAATGATGGTGAATTATCATGAACAGAGTGCCCTAAGGGCAGCTTCTCTAAACAACAAATCCTTCATGCTCGGCAAGAAGTTCGTCAAAGCTTGCATTCCAGGAATCACAGTTGCGAATTTTGCCCAGACCAGGAATGAATGTTTAAAGGGACTTCTGGCCTTTTATAAGGGCTTCATCCCAAATTTTGGACGGCTAGGATATTGGAATGTGATCATGTTTATAACCCTTGAGCAGGTACAAGTTTCGACACCTTCCCTTTTTATTAGTACAGATTTCCCACCTACGGCATCAGAAGCCATTGGGAGTCCACCGATCATAAATAGAAATGGAGCGACTGGGAACTGTCCTGGTTGCACTAACGTTTCTTATCAGAGAGCAGTAGATGATGGCGCTGATATAATCGATTGCTCGGTCCAAATGTCAAGTGATGGAGTTGCCTTCTGCTTAGATTCCATAGACCTCAATTCAGGCACCAATGCATTGACTCAATTCATGACCAAGAGTGAGACCATCCCTGAACTTCAACCTGAAGCTGGAGTCTTCTCGTTCCAGTTCACATGGGAGGAGATTCAGTCCTTAAAAACCCAACTGCAAAGTCCCTATGGAACCAAGGAAAACGTGTATAGAAACCCAGCTAACAAGGATGCAGGCAAACTGGTGACCCTTAATGAATTCCTAGAGTTTGCCAAGGAAAAGGCAACTAGTGGAATTTTGATCGACATTCAGAATGCGCTGTACCTAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005856 GO:0008150 GO:0008582 GO:0040008 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044087 GO:0044424 GO:0044464 GO:0045886 GO:0045926 GO:0048519 GO:0048523 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0051093 GO:0051128 GO:0051129 GO:0051239 GO:0051241 GO:0051960 GO:0051961 GO:0051963 GO:0051964 GO:0065007 GO:0065008 GO:1904396 GO:1904397 GO:1905809 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dev_Cell_Death Kelch_1 Kelch_5

Protein Analysis

541

Amino Acids

60.59

Weight (kDa)

6.14

Isoelectric Point (pI)

40.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dev_Cell_Death	PF10539	34 - 161	5.4e-49	Development and cell death domain
GDPD	PF03009	403 - 536	2.6e-12	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012678)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0317811
rosa_laevigata	RLG00000008297
rosa_multiflora	Rmu_co8382301.1_g000001 Rmu_sc0000654.1_g000044 Rmu_sc0000772.1_g000024 Rmu_sc0000772.1_g000027 Rmu_sc0000772.1_g000042 Rmu_sc0010905.1_g000001
rosa_samantha	Rh1AG029500 Rh1BG025600 Rh1CG027300 Rh1DG042500 Rh1DG043000 Rh1DG043100 Rh1DG043300 Rh1DG043800 Rh4BG172400
rosa_wichuraiana	Rw1G002160 Rw1G002190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1044, 1100
Acc36I	ACCTGC	1 cut(s)	1102
AccB1I	GGYRCC	2 cut(s)	55, 1349
AccB7I	CCANNNNNTGG	1 cut(s)	1064
AccI	GTMKAC	1 cut(s)	713
AccII	CGCG	1 cut(s)	497
AciI	CCGC	2 cut(s)	497, 529
AclI	AACGTT	1 cut(s)	1239
AclWI	GGATC	4 cut(s)	287, 325, 845, 858
AcoI	YGGCCR	1 cut(s)	277
AcsI	RAATTY	7 cut(s)	255, 351, 434, 994, 1060, 1550, 1587
AcuI	CTGAAG	1 cut(s)	1428
AfaI	GTAC	8 cut(s)	69, 244, 519, 527, 801, 1116, 1147, 1616
AfiI	CCNNNNNNNGG	7 cut(s)	577, 883, 1008, 1064, 1111, 1162, 1412
AflIII	ACRYGT	1 cut(s)	1497
AgsI	TTSAA	7 cut(s)	229, 350, 386, 584, 610, 704, 1403
AhlI	ACTAGT	1 cut(s)	1580
AjnI	CCWGG	6 cut(s)	51, 205, 513, 976, 1007, 1225
AleI	CACNNNNGTG	1 cut(s)	99
AloI	GAACNNNNNNTCC	2 cut(s)	319, 351
AluBI	AGCT	9 cut(s)	8, 448, 472, 598, 652, 920, 968, 1412, 1514
AluI	AGCT	9 cut(s)	8, 448, 472, 598, 652, 920, 968, 1412, 1514
Alw26I	GTCTC	2 cut(s)	455, 1379
AlwI	GGATC	4 cut(s)	287, 325, 845, 858
AlwNI	CAGNNNCTG	1 cut(s)	755
AoxI	GGCC	2 cut(s)	277, 1035
ApeKI	GCWGC	3 cut(s)	266, 364, 917
ApoI	RAATTY	7 cut(s)	255, 351, 434, 994, 1060, 1550, 1587
AspLEI	GCGC	3 cut(s)	497, 1271, 1612
AspS9I	GGNCC	2 cut(s)	173, 1291
AsuC2I	CCSGG	1 cut(s)	171
AsuHPI	GGTGA	3 cut(s)	86, 898, 1549
AvaII	GGWCC	2 cut(s)	173, 1291
AxyI	CCTNAGG	1 cut(s)	911
BaeGI	GKGCMC	1 cut(s)	910
BaeI	ACNNNNGTAYC	4 cut(s)	509, 509, 542, 542
BalI	TGGCCA	1 cut(s)	279
BamHI	GGATCC	1 cut(s)	850
BanI	GGYRCC	2 cut(s)	55, 1349
BbsI	GAAGAC	2 cut(s)	23, 1411
BbvI	GCAGC	3 cut(s)	253, 351, 929
BccI	CCATC	7 cut(s)	130, 308, 727, 877, 1259, 1301, 1397
BceAI	ACGGC	2 cut(s)	1085, 1179
BcgI	CGANNNNNNTGC	2 cut(s)	940, 974
BciT130I	CCWGG	6 cut(s)	53, 207, 515, 978, 1009, 1227
BclI	TGATCA	2 cut(s)	451, 1089
BcnI	CCSGG	1 cut(s)	171
BcoDI	GTCTC	2 cut(s)	455, 1379
BcuI	ACTAGT	1 cut(s)	1580
BfaI	CTAG	4 cut(s)	1073, 1556, 1581, 1619
BfmI	CTRYAG	2 cut(s)	365, 421
BfoI	RGCGCY	1 cut(s)	1272
BfuAI	ACCTGC	1 cut(s)	1102
BglI	GCCNNNNNGGC	1 cut(s)	914
BisI	GCNGC	3 cut(s)	267, 365, 918
BlsI	GCNGC	3 cut(s)	268, 366, 919
Bme1390I	CCNGG	7 cut(s)	53, 171, 207, 515, 978, 1009, 1227
Bme18I	GGWCC	2 cut(s)	173, 1291
BmgT120I	GGNCC	2 cut(s)	173, 1291
BmiI	GGNNCC	5 cut(s)	57, 174, 852, 1351, 1486
BmrFI	CCNGG	7 cut(s)	53, 171, 207, 515, 978, 1009, 1227
BmrI	ACTGGG	1 cut(s)	1224
BmsI	GCATC	5 cut(s)	135, 366, 497, 1175, 1513
BmuI	ACTGGG	1 cut(s)	1224
BpiI	GAAGAC	2 cut(s)	23, 1411
BpmI	CTGGAG	3 cut(s)	497, 674, 1434
BpuEI	CTTGAG	1 cut(s)	1127
BpuMI	CCSGG	1 cut(s)	171
Bsa29I	ATCGAT	1 cut(s)	1281
BsaBI	GATNNNNATC	1 cut(s)	849
BsaI	GGTCTC	1 cut(s)	1379
BsaJI	CCNNGG	3 cut(s)	97, 1488, 1566
BsaXI	ACNNNNNCTCC	4 cut(s)	495, 525, 1436, 1466
Bsc4I	CCNNNNNNNGG	7 cut(s)	577, 883, 1008, 1064, 1111, 1162, 1412
Bse1I	ACTGG	3 cut(s)	1219, 1429, 1539
Bse21I	CCTNAGG	1 cut(s)	911
Bse8I	GATNNNNATC	1 cut(s)	849
BseBI	CCWGG	6 cut(s)	53, 207, 515, 978, 1009, 1227
BseCI	ATCGAT	1 cut(s)	1281
BseDI	CCNNGG	3 cut(s)	97, 1488, 1566
BseGI	GGATG	6 cut(s)	357, 719, 850, 1053, 1389, 1528
BseJI	GATNNNNATC	1 cut(s)	849
BseLI	CCNNNNNNNGG	7 cut(s)	577, 883, 1008, 1064, 1111, 1162, 1412
BseMII	CTCAG	3 cut(s)	450, 660, 699
BseNI	ACTGG	3 cut(s)	1219, 1429, 1539
BseRI	GAGGAG	1 cut(s)	1457
BseSI	GKGCMC	1 cut(s)	910
BseXI	GCAGC	3 cut(s)	253, 351, 929
BseYI	CCCAGC	2 cut(s)	269, 1510
BsgI	GTGCAG	1 cut(s)	324
Bsh1236I	CGCG	1 cut(s)	497
BshFI	GGCC	2 cut(s)	279, 1037
BshNI	GGYRCC	2 cut(s)	55, 1349
BshVI	ATCGAT	1 cut(s)	1281
BsiSI	CCGG	2 cut(s)	170, 361
BslFI	GGGAC	2 cut(s)	1041, 1461
BslI	CCNNNNNNNGG	7 cut(s)	577, 883, 1008, 1064, 1111, 1162, 1412
BsmAI	GTCTC	2 cut(s)	455, 1379
BsmFI	GGGAC	2 cut(s)	1041, 1461
BsmI	GAATGC	2 cut(s)	972, 1612
BsnI	GGCC	2 cut(s)	279, 1037
Bso31I	GGTCTC	1 cut(s)	1379
Bsp1286I	GDGCHC	1 cut(s)	910
Bsp1407I	TGTACA	1 cut(s)	67
Bsp143I	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
BspACI	CCGC	2 cut(s)	497, 529
BspANI	GGCC	2 cut(s)	279, 1037
BspCNI	CTCAG	3 cut(s)	451, 661, 700
BspDI	ATCGAT	1 cut(s)	1281
BspFNI	CGCG	1 cut(s)	497
BspHI	TCATGA	2 cut(s)	895, 1371
BspLI	GGNNCC	5 cut(s)	57, 174, 852, 1351, 1486
BspMAI	CTGCAG	1 cut(s)	369
BspMI	ACCTGC	1 cut(s)	1102
BspPI	GGATC	4 cut(s)	287, 325, 845, 858
BspQI	GCTCTTC	1 cut(s)	588
BspT107I	GGYRCC	2 cut(s)	55, 1349
BspTNI	GGTCTC	1 cut(s)	1379
BsrGI	TGTACA	1 cut(s)	67
BsrI	ACTGG	3 cut(s)	1219, 1429, 1539
BssECI	CCNNGG	3 cut(s)	97, 1488, 1566
BssMI	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
BssT1I	CCWWGG	3 cut(s)	97, 1488, 1566
Bst2UI	CCWGG	6 cut(s)	53, 207, 515, 978, 1009, 1227
Bst4CI	ACNGT	7 cut(s)	81, 233, 666, 681, 776, 988, 1223
Bst6I	CTCTTC	2 cut(s)	230, 588
BstAUI	TGTACA	1 cut(s)	67
BstC8I	GCNNGC	5 cut(s)	212, 660, 747, 970, 1528
BstDEI	CTNAG	7 cut(s)	459, 624, 669, 708, 762, 911, 1324
BstEII	GGTNACC	1 cut(s)	1537
BstENI	CCTNNNNNAGG	1 cut(s)	1109
BstF5I	GGATG	6 cut(s)	357, 719, 850, 1053, 1389, 1528
BstFNI	CGCG	1 cut(s)	497
BstH2I	RGCGCY	1 cut(s)	1272
BstHHI	GCGC	3 cut(s)	497, 1271, 1612
BstKTI	GATC	8 cut(s)	295, 320, 454, 558, 853, 1092, 1194, 1596
BstMAI	GTCTC	2 cut(s)	455, 1379
BstMBI	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 494, 914, 998, 1172
BstNI	CCWGG	6 cut(s)	53, 207, 515, 978, 1009, 1227
BstPI	GGTNACC	1 cut(s)	1537
BstSCI	CCNGG	7 cut(s)	51, 169, 205, 513, 976, 1007, 1225
BstSFI	CTRYAG	2 cut(s)	365, 421
BstSLI	GKGCMC	1 cut(s)	910
BstUI	CGCG	1 cut(s)	497
BstV1I	GCAGC	3 cut(s)	253, 351, 929
BstV2I	GAAGAC	2 cut(s)	23, 1411
BstX2I	RGATCY	1 cut(s)	850
BstXI	CCANNNNNNTGG	1 cut(s)	303
BstYI	RGATCY	1 cut(s)	850
Bsu15I	ATCGAT	1 cut(s)	1281
Bsu36I	CCTNAGG	1 cut(s)	911
BsuRI	GGCC	2 cut(s)	279, 1037
BsuTUI	ATCGAT	1 cut(s)	1281
BtsCI	GGATG	6 cut(s)	357, 719, 850, 1053, 1389, 1528
BtsI	GCAGTG	2 cut(s)	374, 377
BtsIMutI	CAGTG	3 cut(s)	327, 374, 377
BveI	ACCTGC	1 cut(s)	1102
Cac8I	GCNNGC	5 cut(s)	212, 660, 747, 970, 1528
CaiI	CAGNNNCTG	1 cut(s)	755
CciI	TCATGA	2 cut(s)	895, 1371
CfoI	GCGC	3 cut(s)	497, 1271, 1612
Cfr13I	GGNCC	2 cut(s)	173, 1291
ClaI	ATCGAT	1 cut(s)	1281
Csp6I	GTAC	8 cut(s)	68, 243, 518, 526, 800, 1115, 1146, 1615
CviAII	CATG	9 cut(s)	251, 275, 455, 896, 943, 1093, 1372, 1437, 1623
CviQI	GTAC	8 cut(s)	68, 243, 518, 526, 800, 1115, 1146, 1615
DdeI	CTNAG	7 cut(s)	459, 624, 669, 708, 762, 911, 1324
DpnI	GATC	8 cut(s)	294, 319, 453, 557, 852, 1091, 1193, 1595
DpnII	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
DraI	TTTAAA	2 cut(s)	397, 1023
EaeI	YGGCCR	1 cut(s)	277
Eam1104I	CTCTTC	2 cut(s)	230, 588
EarI	CTCTTC	2 cut(s)	230, 588
Eco130I	CCWWGG	3 cut(s)	97, 1488, 1566
Eco31I	GGTCTC	1 cut(s)	1379
Eco47I	GGWCC	2 cut(s)	173, 1291
Eco57I	CTGAAG	1 cut(s)	1428
Eco81I	CCTNAGG	1 cut(s)	911
Eco91I	GGTNACC	1 cut(s)	1537
EcoNI	CCTNNNNNAGG	1 cut(s)	1109
EcoO65I	GGTNACC	1 cut(s)	1537
EcoRI	GAATTC	1 cut(s)	1550
EcoRII	CCWGG	6 cut(s)	51, 205, 513, 976, 1007, 1225
EcoT14I	CCWWGG	3 cut(s)	97, 1488, 1566
EcoT22I	ATGCAT	2 cut(s)	829, 1360
ErhI	CCWWGG	3 cut(s)	97, 1488, 1566
FaeI	CATG	9 cut(s)	254, 278, 458, 899, 946, 1096, 1375, 1440, 1626
FalI	AAGNNNNNCTT	2 cut(s)	904, 936
FaqI	GGGAC	2 cut(s)	1041, 1461
FatI	CATG	9 cut(s)	250, 274, 454, 895, 942, 1092, 1371, 1436, 1622
FauNDI	CATATG	2 cut(s)	187, 298
FbaI	TGATCA	2 cut(s)	451, 1089
FblI	GTMKAC	1 cut(s)	713
Fnu4HI	GCNGC	3 cut(s)	267, 365, 918
FokI	GGATG	6 cut(s)	344, 706, 857, 1040, 1376, 1535
Fsp4HI	GCNGC	3 cut(s)	267, 365, 918
FspBI	CTAG	4 cut(s)	1073, 1556, 1581, 1619
GlaI	GCGC	3 cut(s)	496, 1270, 1611
GluI	GCNGC	3 cut(s)	267, 365, 918
GsaI	CCCAGC	2 cut(s)	273, 1514
GsuI	CTGGAG	3 cut(s)	497, 674, 1434
HaeII	RGCGCY	1 cut(s)	1272
HaeIII	GGCC	2 cut(s)	279, 1037
HapII	CCGG	2 cut(s)	170, 361
HhaI	GCGC	3 cut(s)	497, 1271, 1612
Hin1II	CATG	9 cut(s)	254, 278, 458, 899, 946, 1096, 1375, 1440, 1626
Hin6I	GCGC	3 cut(s)	495, 1269, 1610
HinP1I	GCGC	3 cut(s)	495, 1269, 1610
HindIII	AAGCTT	1 cut(s)	966
HpaII	CCGG	2 cut(s)	170, 361
HphI	GGTGA	3 cut(s)	86, 898, 1549
Hpy166II	GTNNAC	5 cut(s)	167, 176, 714, 1187, 1434
Hpy188I	TCNGA	8 cut(s)	670, 709, 757, 793, 878, 1171, 1251, 1605
Hpy188III	TCNNGA	4 cut(s)	584, 610, 896, 1372
Hpy8I	GTNNAC	5 cut(s)	167, 176, 714, 1187, 1434
HpyAV	CCTTC	5 cut(s)	6, 811, 949, 1140, 1327
HpyCH4III	ACNGT	7 cut(s)	81, 233, 666, 681, 776, 988, 1223
HpyCH4IV	ACGT	2 cut(s)	1239, 1497
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 494, 914, 998, 1172
HpyF3I	CTNAG	7 cut(s)	459, 624, 669, 708, 762, 911, 1324
HpySE526I	ACGT	2 cut(s)	1239, 1497
Hsp92II	CATG	9 cut(s)	254, 278, 458, 899, 946, 1096, 1375, 1440, 1626
HspAI	GCGC	3 cut(s)	495, 1269, 1610
Ksp22I	TGATCA	2 cut(s)	451, 1089
Kzo9I	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
LguI	GCTCTTC	1 cut(s)	588
LmnI	GCTCC	3 cut(s)	5, 655, 1208
Lsp1109I	GCAGC	3 cut(s)	253, 351, 929
LweI	GCATC	5 cut(s)	135, 366, 497, 1175, 1513
MaeI	CTAG	4 cut(s)	1073, 1556, 1581, 1619
MaeII	ACGT	2 cut(s)	1239, 1497
MaeIII	GTNAC	1 cut(s)	1537
MalI	GATC	8 cut(s)	294, 319, 453, 557, 852, 1091, 1193, 1595
MboI	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
MboII	GAAGA	7 cut(s)	28, 205, 217, 550, 605, 640, 1411
MflI	RGATCY	1 cut(s)	850
MhlI	GDGCHC	1 cut(s)	910
MlsI	TGGCCA	1 cut(s)	279
MluNI	TGGCCA	1 cut(s)	279
MlyI	GAGTC	7 cut(s)	719, 761, 803, 869, 1192, 1357, 1425
MmeI	TCCRAC	3 cut(s)	284, 586, 765
MnlI	CCTC	9 cut(s)	48, 227, 256, 539, 580, 582, 814, 1349, 1435
Mox20I	TGGCCA	1 cut(s)	279
Mph1103I	ATGCAT	2 cut(s)	829, 1360
MscI	TGGCCA	1 cut(s)	279
MseI	TTAA	7 cut(s)	396, 675, 683, 767, 1022, 1457, 1545
MslI	CAYNNNNRTG	4 cut(s)	99, 131, 134, 735
Msp20I	TGGCCA	1 cut(s)	279
MspI	CCGG	2 cut(s)	170, 361
MspR9I	CCNGG	7 cut(s)	53, 171, 207, 515, 978, 1009, 1227
Mva1269I	GAATGC	2 cut(s)	972, 1612
MvaI	CCWGG	6 cut(s)	53, 207, 515, 978, 1009, 1227
MvnI	CGCG	1 cut(s)	497
MwoI	GCNNNNNNNGC	5 cut(s)	53, 494, 914, 998, 1172
NciI	CCSGG	1 cut(s)	171
NdeI	CATATG	2 cut(s)	187, 298
NdeII	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
NlaIII	CATG	9 cut(s)	254, 278, 458, 899, 946, 1096, 1375, 1440, 1626
NlaIV	GGNNCC	5 cut(s)	57, 174, 852, 1351, 1486
NmeAIII	GCCGAG	1 cut(s)	927
NmuCI	GTSAC	1 cut(s)	1537
NsiI	ATGCAT	2 cut(s)	829, 1360
OliI	CACNNNNGTG	1 cut(s)	99
PagI	TCATGA	2 cut(s)	895, 1371
PciSI	GCTCTTC	1 cut(s)	588
PctI	GAATGC	2 cut(s)	972, 1612
PfeI	GAWTC	5 cut(s)	704, 788, 981, 1328, 1447
PflMI	CCANNNNNTGG	1 cut(s)	1064
PfoI	TCCNGGA	1 cut(s)	976
PkrI	GCNGC	3 cut(s)	268, 366, 919
PleI	GAGTC	7 cut(s)	718, 760, 802, 868, 1191, 1357, 1424
PpsI	GAGTC	7 cut(s)	718, 760, 802, 868, 1191, 1357, 1424
PsiI	TTATAA	2 cut(s)	1044, 1100
Psp1406I	AACGTT	1 cut(s)	1239
Psp6I	CCWGG	6 cut(s)	51, 205, 513, 976, 1007, 1225
PspEI	GGTNACC	1 cut(s)	1537
PspFI	CCCAGC	2 cut(s)	269, 1510
PspGI	CCWGG	6 cut(s)	51, 205, 513, 976, 1007, 1225
PspN4I	GGNNCC	5 cut(s)	57, 174, 852, 1351, 1486
PspPI	GGNCC	2 cut(s)	173, 1291
PstI	CTGCAG	1 cut(s)	369
PstNI	CAGNNNCTG	1 cut(s)	755
PsuI	RGATCY	1 cut(s)	850
RsaI	GTAC	8 cut(s)	69, 244, 519, 527, 801, 1116, 1147, 1616
RsaNI	GTAC	8 cut(s)	68, 243, 518, 526, 800, 1115, 1146, 1615
RseI	CAYNNNNRTG	4 cut(s)	99, 131, 134, 735
SapI	GCTCTTC	1 cut(s)	588
SaqAI	TTAA	7 cut(s)	396, 675, 683, 767, 1022, 1457, 1545
SatI	GCNGC	3 cut(s)	267, 365, 918
Sau3AI	GATC	8 cut(s)	292, 317, 451, 555, 850, 1089, 1191, 1593
Sau96I	GGNCC	2 cut(s)	173, 1291
SchI	GAGTC	7 cut(s)	719, 761, 803, 869, 1192, 1357, 1425
ScrFI	CCNGG	7 cut(s)	53, 171, 207, 515, 978, 1009, 1227
SduI	GDGCHC	1 cut(s)	910
SfaNI	GCATC	5 cut(s)	135, 366, 497, 1175, 1513
SfcI	CTRYAG	2 cut(s)	365, 421
SinI	GGWCC	2 cut(s)	173, 1291
SmiMI	CAYNNNNRTG	4 cut(s)	99, 131, 134, 735
SmlI	CTYRAG	1 cut(s)	1106
SmoI	CTYRAG	1 cut(s)	1106
SpeI	ACTAGT	1 cut(s)	1580
SsiI	CCGC	2 cut(s)	497, 529
SspI	AATATT	2 cut(s)	199, 289
SspMI	CTAG	4 cut(s)	1073, 1556, 1581, 1619
StyD4I	CCNGG	7 cut(s)	51, 169, 205, 513, 976, 1007, 1225
StyI	CCWWGG	3 cut(s)	97, 1488, 1566
TaaI	ACNGT	7 cut(s)	81, 233, 666, 681, 776, 988, 1223
TaiI	ACGT	2 cut(s)	1242, 1500
TaqI	TCGA	3 cut(s)	1124, 1281, 1596
TaqII	GACCGA	1 cut(s)	1279
TatI	WGTACW	2 cut(s)	67, 1145
TfiI	GAWTC	5 cut(s)	704, 788, 981, 1328, 1447
Tru1I	TTAA	7 cut(s)	396, 675, 683, 767, 1022, 1457, 1545
Tru9I	TTAA	7 cut(s)	396, 675, 683, 767, 1022, 1457, 1545
TscAI	CASTG	3 cut(s)	327, 374, 384
TseFI	GTSAC	1 cut(s)	1537
TseI	GCWGC	3 cut(s)	266, 364, 917
Tsp45I	GTSAC	1 cut(s)	1537
TspRI	CASTG	3 cut(s)	327, 374, 384
Van91I	CCANNNNNTGG	1 cut(s)	1064
VpaK11BI	GGWCC	2 cut(s)	173, 1291
XagI	CCTNNNNNAGG	1 cut(s)	1109
XapI	RAATTY	7 cut(s)	255, 351, 434, 994, 1060, 1550, 1587
XmiI	GTMKAC	1 cut(s)	713
XspI	CTAG	4 cut(s)	1073, 1556, 1581, 1619
Zsp2I	ATGCAT	2 cut(s)	829, 1360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.