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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g32184 FvH4_7g32210 |
| rosa_chinensis | RchiOBHm_Chr3g0448411 |
| rosa_multiflora | Rmu_sc0003308.1_g000008 Rmu_sc0008418.1_g000004 Rmu_sc0008418.1_g000005 Rmu_sc0010238.1_g000009 Rmu_sc0010238.1_g000010 |
| rosa_roxburghii | Rroxscaffold_4G00278410 Rroxscaffold_4G00278420 Rroxscaffold_6G00426600 |
| rosa_rugosa | Rorug02G0612200 |
| rosa_samantha | Rh1AG454600 Rh1AG454700 Rh1BG411900 Rh1BG412000 Rh1CG426500 Rh1DG444100 Rh1DG444200 Rh3AG011500 Rh3AG011600 Rh3BG011300 Rh3BG011400 Rh3CG011000 Rh3CG011100 Rh3DG011700 Rh3DG011800 |
| rosa_wichuraiana | Rw0G013340 Rw0G013350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 345 |
| AciI | CCGC | 1 cut(s) | 143 |
| AclWI | GGATC | 1 cut(s) | 205 |
| AcsI | RAATTY | 1 cut(s) | 124 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 413 |
| AflIII | ACRYGT | 1 cut(s) | 16 |
| AgsI | TTSAA | 2 cut(s) | 236, 313 |
| AjnI | CCWGG | 1 cut(s) | 406 |
| AluBI | AGCT | 1 cut(s) | 9 |
| AluI | AGCT | 1 cut(s) | 9 |
| Alw26I | GTCTC | 1 cut(s) | 56 |
| AlwI | GGATC | 1 cut(s) | 205 |
| ApeKI | GCWGC | 1 cut(s) | 139 |
| ApoI | RAATTY | 1 cut(s) | 124 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 245, 277 |
| AspA2I | CCTAGG | 1 cut(s) | 257 |
| AvrII | CCTAGG | 1 cut(s) | 257 |
| BbvI | GCAGC | 1 cut(s) | 151 |
| BceAI | ACGGC | 1 cut(s) | 351 |
| BciT130I | CCWGG | 1 cut(s) | 408 |
| BclI | TGATCA | 2 cut(s) | 267, 327 |
| BcoDI | GTCTC | 1 cut(s) | 56 |
| BfaI | CTAG | 2 cut(s) | 258, 351 |
| BisI | GCNGC | 2 cut(s) | 140, 143 |
| BlnI | CCTAGG | 1 cut(s) | 257 |
| BlsI | GCNGC | 2 cut(s) | 141, 144 |
| Bme1390I | CCNGG | 1 cut(s) | 408 |
| BmiI | GGNNCC | 1 cut(s) | 321 |
| BmrFI | CCNGG | 1 cut(s) | 408 |
| BmsI | GCATC | 1 cut(s) | 124 |
| BpuEI | CTTGAG | 1 cut(s) | 50 |
| BsaBI | GATNNNNATC | 1 cut(s) | 387 |
| BsaJI | CCNNGG | 4 cut(s) | 28, 129, 257, 407 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 413 |
| Bse8I | GATNNNNATC | 1 cut(s) | 387 |
| BseBI | CCWGG | 1 cut(s) | 408 |
| BseDI | CCNNGG | 4 cut(s) | 28, 129, 257, 407 |
| BseGI | GGATG | 2 cut(s) | 279, 400 |
| BseJI | GATNNNNATC | 1 cut(s) | 387 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 413 |
| BseMII | CTCAG | 1 cut(s) | 360 |
| BseRI | GAGGAG | 1 cut(s) | 122 |
| BseXI | GCAGC | 1 cut(s) | 151 |
| BslFI | GGGAC | 1 cut(s) | 84 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 413 |
| BsmAI | GTCTC | 1 cut(s) | 56 |
| BsmBI | CGTCTC | 1 cut(s) | 56 |
| BsmFI | GGGAC | 1 cut(s) | 84 |
| Bsp143I | GATC | 3 cut(s) | 197, 267, 327 |
| BspACI | CCGC | 1 cut(s) | 143 |
| BspCNI | CTCAG | 1 cut(s) | 361 |
| BspHI | TCATGA | 1 cut(s) | 360 |
| BspLI | GGNNCC | 1 cut(s) | 321 |
| BspPI | GGATC | 1 cut(s) | 205 |
| BssECI | CCNNGG | 4 cut(s) | 28, 129, 257, 407 |
| BssMI | GATC | 3 cut(s) | 197, 267, 327 |
| BssT1I | CCWWGG | 3 cut(s) | 28, 129, 257 |
| Bst2UI | CCWGG | 1 cut(s) | 408 |
| Bst4CI | ACNGT | 1 cut(s) | 60 |
| BstDEI | CTNAG | 1 cut(s) | 369 |
| BstF5I | GGATG | 2 cut(s) | 279, 400 |
| BstKTI | GATC | 3 cut(s) | 200, 270, 330 |
| BstMAI | GTCTC | 1 cut(s) | 56 |
| BstMBI | GATC | 3 cut(s) | 197, 267, 327 |
| BstNI | CCWGG | 1 cut(s) | 408 |
| BstNSI | RCATGY | 2 cut(s) | 20, 306 |
| BstSCI | CCNGG | 1 cut(s) | 406 |
| BstV1I | GCAGC | 1 cut(s) | 151 |
| BtgZI | GCGATG | 1 cut(s) | 189 |
| BtsCI | GGATG | 2 cut(s) | 279, 400 |
| CciI | TCATGA | 1 cut(s) | 360 |
| CviAII | CATG | 5 cut(s) | 17, 82, 161, 303, 361 |
| CviJI | RGCY | 4 cut(s) | 9, 142, 226, 338 |
| CviKI_1 | RGCY | 4 cut(s) | 9, 142, 226, 338 |
| DdeI | CTNAG | 1 cut(s) | 369 |
| DpnI | GATC | 3 cut(s) | 199, 269, 329 |
| DpnII | GATC | 3 cut(s) | 197, 267, 327 |
| Eco130I | CCWWGG | 3 cut(s) | 28, 129, 257 |
| EcoRI | GAATTC | 1 cut(s) | 124 |
| EcoRII | CCWGG | 1 cut(s) | 406 |
| EcoT14I | CCWWGG | 3 cut(s) | 28, 129, 257 |
| EcoT22I | ATGCAT | 1 cut(s) | 158 |
| ErhI | CCWWGG | 3 cut(s) | 28, 129, 257 |
| Esp3I | CGTCTC | 1 cut(s) | 56 |
| FaeI | CATG | 5 cut(s) | 20, 85, 164, 306, 364 |
| FaiI | YATR | 8 cut(s) | 18, 83, 158, 162, 210, 304, 345, 362 |
| FaqI | GGGAC | 1 cut(s) | 84 |
| FatI | CATG | 5 cut(s) | 16, 81, 160, 302, 360 |
| FbaI | TGATCA | 2 cut(s) | 267, 327 |
| Fnu4HI | GCNGC | 2 cut(s) | 140, 143 |
| FokI | GGATG | 2 cut(s) | 286, 387 |
| Fsp4HI | GCNGC | 2 cut(s) | 140, 143 |
| FspBI | CTAG | 2 cut(s) | 258, 351 |
| GluI | GCNGC | 2 cut(s) | 140, 143 |
| Hin1II | CATG | 5 cut(s) | 20, 85, 164, 306, 364 |
| Hpy166II | GTNNAC | 1 cut(s) | 25 |
| Hpy188I | TCNGA | 2 cut(s) | 205, 382 |
| Hpy188III | TCNNGA | 3 cut(s) | 119, 271, 361 |
| Hpy8I | GTNNAC | 1 cut(s) | 25 |
| HpyCH4III | ACNGT | 1 cut(s) | 60 |
| HpyCH4V | TGCA | 4 cut(s) | 156, 245, 306, 375 |
| HpyF3I | CTNAG | 1 cut(s) | 369 |
| Hsp92II | CATG | 5 cut(s) | 20, 85, 164, 306, 364 |
| Ksp22I | TGATCA | 2 cut(s) | 267, 327 |
| Kzo9I | GATC | 3 cut(s) | 197, 267, 327 |
| LpnPI | CCDG | 4 cut(s) | 62, 208, 256, 393 |
| Lsp1109I | GCAGC | 1 cut(s) | 151 |
| LweI | GCATC | 1 cut(s) | 124 |
| MaeI | CTAG | 2 cut(s) | 258, 351 |
| MaeIII | GTNAC | 1 cut(s) | 60 |
| MalI | GATC | 3 cut(s) | 199, 269, 329 |
| MboI | GATC | 3 cut(s) | 197, 267, 327 |
| MboII | GAAGA | 2 cut(s) | 46, 224 |
| MluCI | AATT | 5 cut(s) | 124, 277, 296, 340, 376 |
| MnlI | CCTC | 3 cut(s) | 100, 103, 414 |
| Mph1103I | ATGCAT | 1 cut(s) | 158 |
| MspR9I | CCNGG | 1 cut(s) | 408 |
| MvaI | CCWGG | 1 cut(s) | 408 |
| NdeII | GATC | 3 cut(s) | 197, 267, 327 |
| NlaIII | CATG | 5 cut(s) | 20, 85, 164, 306, 364 |
| NlaIV | GGNNCC | 1 cut(s) | 321 |
| NmuCI | GTSAC | 1 cut(s) | 60 |
| NsiI | ATGCAT | 1 cut(s) | 158 |
| NspI | RCATGY | 2 cut(s) | 20, 306 |
| PagI | TCATGA | 1 cut(s) | 360 |
| PciI | ACATGT | 1 cut(s) | 16 |
| PkrI | GCNGC | 2 cut(s) | 141, 144 |
| PscI | ACATGT | 1 cut(s) | 16 |
| PsiI | TTATAA | 1 cut(s) | 345 |
| Psp6I | CCWGG | 1 cut(s) | 406 |
| PspGI | CCWGG | 1 cut(s) | 406 |
| PspN4I | GGNNCC | 1 cut(s) | 321 |
| SatI | GCNGC | 2 cut(s) | 140, 143 |
| Sau3AI | GATC | 3 cut(s) | 197, 267, 327 |
| ScrFI | CCNGG | 1 cut(s) | 408 |
| SetI | ASST | 3 cut(s) | 11, 135, 263 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SmlI | CTYRAG | 1 cut(s) | 65 |
| SmoI | CTYRAG | 1 cut(s) | 65 |
| Sse9I | AATT | 5 cut(s) | 124, 277, 296, 340, 376 |
| SsiI | CCGC | 1 cut(s) | 143 |
| SspMI | CTAG | 2 cut(s) | 258, 351 |
| StyD4I | CCNGG | 1 cut(s) | 406 |
| StyI | CCWWGG | 3 cut(s) | 28, 129, 257 |
| TaaI | ACNGT | 1 cut(s) | 60 |
| TaqI | TCGA | 1 cut(s) | 391 |
| TasI | AATT | 5 cut(s) | 124, 277, 296, 340, 376 |
| TauI | GCSGC | 1 cut(s) | 145 |
| TseFI | GTSAC | 1 cut(s) | 60 |
| TseI | GCWGC | 1 cut(s) | 139 |
| Tsp45I | GTSAC | 1 cut(s) | 60 |
| TspDTI | ATGAA | 4 cut(s) | 192, 290, 349, 389 |
| TspGWI | ACGGA | 1 cut(s) | 312 |
| XapI | RAATTY | 1 cut(s) | 124 |
| XceI | RCATGY | 2 cut(s) | 20, 306 |
| XmaJI | CCTAGG | 1 cut(s) | 257 |
| XspI | CTAG | 2 cut(s) | 258, 351 |
| Zsp2I | ATGCAT | 1 cut(s) | 158 |