Belongs to the AAA ATPase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27680 AT5G53540 |
| fragaria_vesca | FvH4_7g32510 |
| malus_domestica | MD01G1225800.v1.1 MD07G1296300.v1.1 |
| prunus_persica | Prupe.2G315900_v2.0.a1 |
| pyrus_communis | pycom01g23430 pycom07g26910 |
| rosa_chinensis | RchiOBHm_Chr1g0382351 |
| rosa_laevigata | RLG00000026184 |
| rosa_multiflora | Rmu_sc0000110.1_g000041 Rmu_sc0006177.1_g000002 Rmu_sc0028160.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00278170 |
| rosa_rugosa | Rorug01G0433600 |
| rosa_samantha | Rh1AG458300 Rh1BG414600 Rh1CG428700 Rh1DG446700 |
| rosa_wichuraiana | Rw1G041270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 221 |
| AccB1I | GGYRCC | 1 cut(s) | 159 |
| AccII | CGCG | 2 cut(s) | 53, 114 |
| AciI | CCGC | 3 cut(s) | 51, 60, 112 |
| AclWI | GGATC | 2 cut(s) | 1163, 1172 |
| AcoI | YGGCCR | 1 cut(s) | 166 |
| AcuI | CTGAAG | 2 cut(s) | 332, 936 |
| AcyI | GRCGYC | 3 cut(s) | 5, 160, 727 |
| AfaI | GTAC | 2 cut(s) | 388, 586 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 359, 389, 765 |
| AgsI | TTSAA | 8 cut(s) | 293, 799, 815, 1048, 1077, 1109, 1156, 1163 |
| AjnI | CCWGG | 5 cut(s) | 72, 132, 1004, 1066, 1173 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 8, 40, 1073, 1105 |
| Alw21I | GWGCWC | 4 cut(s) | 39, 141, 885, 1128 |
| Alw26I | GTCTC | 1 cut(s) | 909 |
| AlwI | GGATC | 2 cut(s) | 1163, 1172 |
| Ama87I | CYCGRG | 1 cut(s) | 666 |
| AoxI | GGCC | 6 cut(s) | 117, 129, 166, 317, 738, 962 |
| ApeKI | GCWGC | 6 cut(s) | 69, 683, 842, 896, 1022, 1112 |
| AseI | ATTAAT | 2 cut(s) | 444, 1119 |
| AspLEI | GCGC | 3 cut(s) | 59, 162, 582 |
| AspS9I | GGNCC | 4 cut(s) | 130, 322, 350, 377 |
| AsuC2I | CCSGG | 1 cut(s) | 384 |
| AsuHPI | GGTGA | 5 cut(s) | 310, 494, 815, 1056, 1106 |
| AvaI | CYCGRG | 1 cut(s) | 666 |
| AvaII | GGWCC | 3 cut(s) | 322, 350, 377 |
| AxyI | CCTNAGG | 1 cut(s) | 735 |
| BamHI | GGATCC | 1 cut(s) | 1177 |
| BanI | GGYRCC | 1 cut(s) | 159 |
| BanII | GRGCYC | 4 cut(s) | 39, 93, 885, 1128 |
| BbsI | GAAGAC | 2 cut(s) | 401, 722 |
| Bbv12I | GWGCWC | 4 cut(s) | 39, 141, 885, 1128 |
| BbvCI | CCTCAGC | 1 cut(s) | 852 |
| BbvI | GCAGC | 6 cut(s) | 56, 670, 829, 908, 1009, 1099 |
| BccI | CCATC | 3 cut(s) | 635, 706, 1063 |
| BceAI | ACGGC | 2 cut(s) | 153, 567 |
| BciT130I | CCWGG | 5 cut(s) | 74, 134, 1006, 1068, 1175 |
| BcnI | CCSGG | 1 cut(s) | 384 |
| BcoDI | GTCTC | 1 cut(s) | 909 |
| BfaI | CTAG | 2 cut(s) | 156, 923 |
| BfmI | CTRYAG | 3 cut(s) | 29, 588, 651 |
| BfoI | RGCGCY | 3 cut(s) | 60, 163, 583 |
| BglII | AGATCT | 1 cut(s) | 871 |
| BisI | GCNGC | 8 cut(s) | 51, 60, 70, 684, 843, 897, 1023, 1113 |
| BlsI | GCNGC | 8 cut(s) | 52, 61, 71, 685, 844, 898, 1024, 1114 |
| Bme1390I | CCNGG | 6 cut(s) | 74, 134, 384, 1006, 1068, 1175 |
| Bme18I | GGWCC | 3 cut(s) | 322, 350, 377 |
| BmeT110I | CYCGRG | 1 cut(s) | 666 |
| BmgT120I | GGNCC | 4 cut(s) | 130, 322, 350, 377 |
| BmiI | GGNNCC | 3 cut(s) | 92, 161, 1179 |
| BmrFI | CCNGG | 6 cut(s) | 74, 134, 384, 1006, 1068, 1175 |
| BmrI | ACTGGG | 2 cut(s) | 275, 399 |
| BmsI | GCATC | 2 cut(s) | 475, 744 |
| BmuI | ACTGGG | 2 cut(s) | 275, 399 |
| BpiI | GAAGAC | 2 cut(s) | 401, 722 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 236, 268, 845, 877 |
| BpmI | CTGGAG | 3 cut(s) | 155, 450, 515 |
| Bpu10I | CCTNAGC | 1 cut(s) | 852 |
| BpuEI | CTTGAG | 1 cut(s) | 899 |
| BpuMI | CCSGG | 1 cut(s) | 384 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 160, 727 |
| BsaJI | CCNNGG | 8 cut(s) | 132, 163, 334, 346, 846, 959, 1067, 1173 |
| BsaWI | WCCGGW | 2 cut(s) | 863, 1091 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 359, 389, 765 |
| Bse1I | ACTGG | 4 cut(s) | 270, 300, 394, 1103 |
| Bse21I | CCTNAGG | 1 cut(s) | 735 |
| BseBI | CCWGG | 5 cut(s) | 74, 134, 1006, 1068, 1175 |
| BseDI | CCNNGG | 8 cut(s) | 132, 163, 334, 346, 846, 959, 1067, 1173 |
| BseGI | GGATG | 3 cut(s) | 205, 646, 759 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 359, 389, 765 |
| BseMII | CTCAG | 4 cut(s) | 612, 749, 768, 843 |
| BseNI | ACTGG | 4 cut(s) | 270, 300, 394, 1103 |
| BseX3I | CGGCCG | 1 cut(s) | 166 |
| BseXI | GCAGC | 6 cut(s) | 56, 670, 829, 908, 1009, 1099 |
| Bsh1236I | CGCG | 2 cut(s) | 53, 114 |
| Bsh1285I | CGRYCG | 1 cut(s) | 169 |
| BshFI | GGCC | 6 cut(s) | 119, 131, 168, 319, 740, 964 |
| BshNI | GGYRCC | 1 cut(s) | 159 |
| BsiEI | CGRYCG | 1 cut(s) | 169 |
| BsiHKAI | GWGCWC | 4 cut(s) | 39, 141, 885, 1128 |
| BsiHKCI | CYCGRG | 1 cut(s) | 666 |
| BsiSI | CCGG | 4 cut(s) | 320, 383, 864, 1092 |
| BslFI | GGGAC | 1 cut(s) | 588 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 359, 389, 765 |
| BsmAI | GTCTC | 1 cut(s) | 909 |
| BsmFI | GGGAC | 1 cut(s) | 588 |
| BsnI | GGCC | 6 cut(s) | 119, 131, 168, 319, 740, 964 |
| BsoBI | CYCGRG | 1 cut(s) | 666 |
| Bsp1286I | GDGCHC | 5 cut(s) | 39, 93, 141, 885, 1128 |
| Bsp143I | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| Bsp19I | CCATGG | 1 cut(s) | 334 |
| BspACI | CCGC | 3 cut(s) | 51, 60, 112 |
| BspANI | GGCC | 6 cut(s) | 119, 131, 168, 319, 740, 964 |
| BspCNI | CTCAG | 4 cut(s) | 613, 748, 769, 844 |
| BspFNI | CGCG | 2 cut(s) | 53, 114 |
| BspLI | GGNNCC | 3 cut(s) | 92, 161, 1179 |
| BspMAI | CTGCAG | 1 cut(s) | 33 |
| BspPI | GGATC | 2 cut(s) | 1163, 1172 |
| BspT107I | GGYRCC | 1 cut(s) | 159 |
| BsrI | ACTGG | 4 cut(s) | 270, 300, 394, 1103 |
| BssECI | CCNNGG | 8 cut(s) | 132, 163, 334, 346, 846, 959, 1067, 1173 |
| BssMI | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| BssNI | GRCGYC | 3 cut(s) | 5, 160, 727 |
| BssT1I | CCWWGG | 4 cut(s) | 334, 346, 846, 959 |
| Bst2UI | CCWGG | 5 cut(s) | 74, 134, 1006, 1068, 1175 |
| Bst4CI | ACNGT | 1 cut(s) | 836 |
| Bst6I | CTCTTC | 1 cut(s) | 308 |
| BstACI | GRCGYC | 3 cut(s) | 5, 160, 727 |
| BstC8I | GCNNGC | 5 cut(s) | 55, 211, 405, 537, 663 |
| BstDEI | CTNAG | 5 cut(s) | 621, 735, 777, 852, 1131 |
| BstDSI | CCRYGG | 1 cut(s) | 334 |
| BstF5I | GGATG | 3 cut(s) | 205, 646, 759 |
| BstFNI | CGCG | 2 cut(s) | 53, 114 |
| BstH2I | RGCGCY | 3 cut(s) | 60, 163, 583 |
| BstHHI | GCGC | 3 cut(s) | 59, 162, 582 |
| BstKTI | GATC | 4 cut(s) | 658, 874, 1171, 1180 |
| BstMAI | GTCTC | 1 cut(s) | 909 |
| BstMBI | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| BstMCI | CGRYCG | 1 cut(s) | 169 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 56, 59, 848, 1132 |
| BstNI | CCWGG | 5 cut(s) | 74, 134, 1006, 1068, 1175 |
| BstNSI | RCATGY | 1 cut(s) | 665 |
| BstSCI | CCNGG | 6 cut(s) | 72, 132, 382, 1004, 1066, 1173 |
| BstSFI | CTRYAG | 3 cut(s) | 29, 588, 651 |
| BstUI | CGCG | 2 cut(s) | 53, 114 |
| BstV1I | GCAGC | 6 cut(s) | 56, 670, 829, 908, 1009, 1099 |
| BstV2I | GAAGAC | 2 cut(s) | 401, 722 |
| BstX2I | RGATCY | 2 cut(s) | 871, 1177 |
| BstYI | RGATCY | 2 cut(s) | 871, 1177 |
| BstZI | CGGCCG | 1 cut(s) | 166 |
| Bsu36I | CCTNAGG | 1 cut(s) | 735 |
| BsuRI | GGCC | 6 cut(s) | 119, 131, 168, 319, 740, 964 |
| BtgI | CCRYGG | 1 cut(s) | 334 |
| BtgZI | GCGATG | 1 cut(s) | 228 |
| BtsCI | GGATG | 3 cut(s) | 205, 646, 759 |
| BtsIMutI | CAGTG | 1 cut(s) | 308 |
| Cac8I | GCNNGC | 5 cut(s) | 55, 211, 405, 537, 663 |
| CfoI | GCGC | 3 cut(s) | 59, 162, 582 |
| Cfr13I | GGNCC | 4 cut(s) | 130, 322, 350, 377 |
| CseI | GACGC | 1 cut(s) | 716 |
| Csp6I | GTAC | 2 cut(s) | 387, 585 |
| CviAII | CATG | 6 cut(s) | 64, 335, 596, 613, 628, 662 |
| CviQI | GTAC | 2 cut(s) | 387, 585 |
| DdeI | CTNAG | 5 cut(s) | 621, 735, 777, 852, 1131 |
| DinI | GGCGCC | 1 cut(s) | 161 |
| DpnI | GATC | 4 cut(s) | 657, 873, 1170, 1179 |
| DpnII | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| EaeI | YGGCCR | 1 cut(s) | 166 |
| EagI | CGGCCG | 1 cut(s) | 166 |
| Eam1104I | CTCTTC | 1 cut(s) | 308 |
| EarI | CTCTTC | 1 cut(s) | 308 |
| Ecl136II | GAGCTC | 3 cut(s) | 37, 883, 1126 |
| EclXI | CGGCCG | 1 cut(s) | 166 |
| Eco130I | CCWWGG | 4 cut(s) | 334, 346, 846, 959 |
| Eco147I | AGGCCT | 2 cut(s) | 119, 740 |
| Eco24I | GRGCYC | 4 cut(s) | 39, 93, 885, 1128 |
| Eco32I | GATATC | 1 cut(s) | 456 |
| Eco47I | GGWCC | 3 cut(s) | 322, 350, 377 |
| Eco52I | CGGCCG | 1 cut(s) | 166 |
| Eco53kI | GAGCTC | 3 cut(s) | 37, 883, 1126 |
| Eco57I | CTGAAG | 2 cut(s) | 332, 936 |
| Eco81I | CCTNAGG | 1 cut(s) | 735 |
| Eco88I | CYCGRG | 1 cut(s) | 666 |
| EcoICRI | GAGCTC | 3 cut(s) | 37, 883, 1126 |
| EcoO109I | RGGNCCY | 1 cut(s) | 130 |
| EcoRII | CCWGG | 5 cut(s) | 72, 132, 1004, 1066, 1173 |
| EcoRV | GATATC | 1 cut(s) | 456 |
| EcoT14I | CCWWGG | 4 cut(s) | 334, 346, 846, 959 |
| EcoT38I | GRGCYC | 4 cut(s) | 39, 93, 885, 1128 |
| EgeI | GGCGCC | 1 cut(s) | 161 |
| EheI | GGCGCC | 1 cut(s) | 161 |
| ErhI | CCWWGG | 4 cut(s) | 334, 346, 846, 959 |
| FaeI | CATG | 6 cut(s) | 67, 338, 599, 616, 631, 665 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 350, 382, 705, 737, 779, 811 |
| FaqI | GGGAC | 1 cut(s) | 588 |
| FatI | CATG | 6 cut(s) | 63, 334, 595, 612, 627, 661 |
| Fnu4HI | GCNGC | 8 cut(s) | 51, 60, 70, 684, 843, 897, 1023, 1113 |
| FokI | GGATG | 3 cut(s) | 212, 653, 766 |
| FriOI | GRGCYC | 4 cut(s) | 39, 93, 885, 1128 |
| Fsp4HI | GCNGC | 8 cut(s) | 51, 60, 70, 684, 843, 897, 1023, 1113 |
| FspBI | CTAG | 2 cut(s) | 156, 923 |
| GlaI | GCGC | 3 cut(s) | 58, 161, 581 |
| GluI | GCNGC | 8 cut(s) | 51, 60, 70, 684, 843, 897, 1023, 1113 |
| GsuI | CTGGAG | 3 cut(s) | 155, 450, 515 |
| HaeII | RGCGCY | 3 cut(s) | 60, 163, 583 |
| HaeIII | GGCC | 6 cut(s) | 119, 131, 168, 319, 740, 964 |
| HapII | CCGG | 4 cut(s) | 320, 383, 864, 1092 |
| HgaI | GACGC | 1 cut(s) | 716 |
| HhaI | GCGC | 3 cut(s) | 59, 162, 582 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 160, 727 |
| Hin1II | CATG | 6 cut(s) | 67, 338, 599, 616, 631, 665 |
| Hin6I | GCGC | 3 cut(s) | 57, 160, 580 |
| HinP1I | GCGC | 3 cut(s) | 57, 160, 580 |
| HincII | GTYRAC | 1 cut(s) | 606 |
| HindII | GTYRAC | 1 cut(s) | 606 |
| HindIII | AAGCTT | 1 cut(s) | 1133 |
| HinfI | GANTC | 5 cut(s) | 301, 363, 425, 1088, 1099 |
| HpaI | GTTAAC | 1 cut(s) | 606 |
| HpaII | CCGG | 4 cut(s) | 320, 383, 864, 1092 |
| HphI | GGTGA | 5 cut(s) | 310, 494, 815, 1056, 1106 |
| Hpy166II | GTNNAC | 3 cut(s) | 353, 606, 648 |
| Hpy188I | TCNGA | 4 cut(s) | 95, 703, 871, 914 |
| Hpy188III | TCNNGA | 2 cut(s) | 429, 796 |
| Hpy8I | GTNNAC | 3 cut(s) | 353, 606, 648 |
| Hpy99I | CGWCG | 2 cut(s) | 10, 557 |
| HpyAV | CCTTC | 5 cut(s) | 121, 139, 793, 931, 970 |
| HpyCH4III | ACNGT | 1 cut(s) | 836 |
| HpyCH4V | TGCA | 7 cut(s) | 31, 419, 488, 888, 998, 1025, 1115 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 56, 59, 848, 1132 |
| HpyF3I | CTNAG | 5 cut(s) | 621, 735, 777, 852, 1131 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 160, 727 |
| Hsp92II | CATG | 6 cut(s) | 67, 338, 599, 616, 631, 665 |
| HspAI | GCGC | 3 cut(s) | 57, 160, 580 |
| KasI | GGCGCC | 1 cut(s) | 159 |
| KspAI | GTTAAC | 1 cut(s) | 606 |
| Kzo9I | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| LmnI | GCTCC | 4 cut(s) | 34, 96, 136, 431 |
| Lsp1109I | GCAGC | 6 cut(s) | 56, 670, 829, 908, 1009, 1099 |
| LweI | GCATC | 2 cut(s) | 475, 744 |
| MaeI | CTAG | 2 cut(s) | 156, 923 |
| MaeIII | GTNAC | 1 cut(s) | 857 |
| MalI | GATC | 4 cut(s) | 657, 873, 1170, 1179 |
| MboI | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| MboII | GAAGA | 6 cut(s) | 296, 325, 406, 722, 941, 942 |
| MflI | RGATCY | 2 cut(s) | 871, 1177 |
| MhlI | GDGCHC | 5 cut(s) | 39, 93, 141, 885, 1128 |
| MluCI | AATT | 1 cut(s) | 1116 |
| Mly113I | GGCGCC | 1 cut(s) | 160 |
| MlyI | GAGTC | 3 cut(s) | 372, 434, 1097 |
| MmeI | TCCRAC | 1 cut(s) | 118 |
| MseI | TTAA | 6 cut(s) | 249, 330, 444, 605, 968, 1119 |
| MslI | CAYNNNNRTG | 2 cut(s) | 237, 239 |
| MspI | CCGG | 4 cut(s) | 320, 383, 864, 1092 |
| MspR9I | CCNGG | 6 cut(s) | 74, 134, 384, 1006, 1068, 1175 |
| MvaI | CCWGG | 5 cut(s) | 74, 134, 1006, 1068, 1175 |
| MvnI | CGCG | 2 cut(s) | 53, 114 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 56, 59, 848, 1132 |
| NarI | GGCGCC | 1 cut(s) | 160 |
| NciI | CCSGG | 1 cut(s) | 384 |
| NcoI | CCATGG | 1 cut(s) | 334 |
| NdeII | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| NlaIII | CATG | 6 cut(s) | 67, 338, 599, 616, 631, 665 |
| NlaIV | GGNNCC | 3 cut(s) | 92, 161, 1179 |
| NmeAIII | GCCGAG | 1 cut(s) | 144 |
| NspI | RCATGY | 1 cut(s) | 665 |
| PaeI | GCATGC | 1 cut(s) | 665 |
| PceI | AGGCCT | 2 cut(s) | 119, 740 |
| PfeI | GAWTC | 2 cut(s) | 301, 1099 |
| PkrI | GCNGC | 8 cut(s) | 52, 61, 71, 685, 844, 898, 1024, 1114 |
| PleI | GAGTC | 3 cut(s) | 371, 433, 1096 |
| PluTI | GGCGCC | 1 cut(s) | 163 |
| PpsI | GAGTC | 3 cut(s) | 371, 433, 1096 |
| PshBI | ATTAAT | 2 cut(s) | 444, 1119 |
| PsiI | TTATAA | 1 cut(s) | 221 |
| Psp124BI | GAGCTC | 3 cut(s) | 39, 885, 1128 |
| Psp6I | CCWGG | 5 cut(s) | 72, 132, 1004, 1066, 1173 |
| PspGI | CCWGG | 5 cut(s) | 72, 132, 1004, 1066, 1173 |
| PspN4I | GGNNCC | 3 cut(s) | 92, 161, 1179 |
| PspPI | GGNCC | 4 cut(s) | 130, 322, 350, 377 |
| PstI | CTGCAG | 1 cut(s) | 33 |
| PsuI | RGATCY | 2 cut(s) | 871, 1177 |
| RsaI | GTAC | 2 cut(s) | 388, 586 |
| RsaNI | GTAC | 2 cut(s) | 387, 585 |
| RseI | CAYNNNNRTG | 2 cut(s) | 237, 239 |
| SacI | GAGCTC | 3 cut(s) | 39, 885, 1128 |
| SaqAI | TTAA | 6 cut(s) | 249, 330, 444, 605, 968, 1119 |
| SatI | GCNGC | 8 cut(s) | 51, 60, 70, 684, 843, 897, 1023, 1113 |
| Sau3AI | GATC | 4 cut(s) | 655, 871, 1168, 1177 |
| Sau96I | GGNCC | 4 cut(s) | 130, 322, 350, 377 |
| SbfI | CCTGCAGG | 1 cut(s) | 33 |
| SchI | GAGTC | 3 cut(s) | 372, 434, 1097 |
| ScrFI | CCNGG | 6 cut(s) | 74, 134, 384, 1006, 1068, 1175 |
| SdaI | CCTGCAGG | 1 cut(s) | 33 |
| SduI | GDGCHC | 5 cut(s) | 39, 93, 141, 885, 1128 |
| SfaNI | GCATC | 2 cut(s) | 475, 744 |
| SfcI | CTRYAG | 3 cut(s) | 29, 588, 651 |
| SfoI | GGCGCC | 1 cut(s) | 161 |
| SinI | GGWCC | 3 cut(s) | 322, 350, 377 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 237, 239 |
| SmlI | CTYRAG | 1 cut(s) | 878 |
| SmoI | CTYRAG | 1 cut(s) | 878 |
| SphI | GCATGC | 1 cut(s) | 665 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 33 |
| Sse9I | AATT | 1 cut(s) | 1116 |
| SseBI | AGGCCT | 2 cut(s) | 119, 740 |
| SsiI | CCGC | 3 cut(s) | 51, 60, 112 |
| SspDI | GGCGCC | 1 cut(s) | 159 |
| SspI | AATATT | 2 cut(s) | 1152, 1159 |
| SspMI | CTAG | 2 cut(s) | 156, 923 |
| SstI | GAGCTC | 3 cut(s) | 39, 885, 1128 |
| StuI | AGGCCT | 2 cut(s) | 119, 740 |
| StyD4I | CCNGG | 6 cut(s) | 72, 132, 382, 1004, 1066, 1173 |
| StyI | CCWWGG | 4 cut(s) | 334, 346, 846, 959 |
| TaaI | ACNGT | 1 cut(s) | 836 |
| TaqI | TCGA | 2 cut(s) | 102, 552 |
| TasI | AATT | 1 cut(s) | 1116 |
| TauI | GCSGC | 2 cut(s) | 53, 62 |
| TfiI | GAWTC | 2 cut(s) | 301, 1099 |
| Tru1I | TTAA | 6 cut(s) | 249, 330, 444, 605, 968, 1119 |
| Tru9I | TTAA | 6 cut(s) | 249, 330, 444, 605, 968, 1119 |
| TscAI | CASTG | 1 cut(s) | 315 |
| TseI | GCWGC | 6 cut(s) | 69, 683, 842, 896, 1022, 1112 |
| TspDTI | ATGAA | 6 cut(s) | 430, 612, 616, 629, 726, 942 |
| TspRI | CASTG | 1 cut(s) | 315 |
| VpaK11BI | GGWCC | 3 cut(s) | 322, 350, 377 |
| VspI | ATTAAT | 2 cut(s) | 444, 1119 |
| XceI | RCATGY | 1 cut(s) | 665 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 70, 130, 262 |
| XspI | CTAG | 2 cut(s) | 156, 923 |