Transcription initiation factor IIF subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52270 |
| rosa_chinensis | RchiOBHm_Chr1g0318621 RchiOBHm_Chr2g0111291 RchiOBHm_Chr6g0302021 |
| rosa_laevigata | RLG00000011202 RLG00000017882 |
| rosa_multiflora | Rmu_co8206050.1_g000001 Rmu_sc0005033.1_g000009 Rmu_sc0040640.1_g000001 Rmu_sc0040770.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00166180 |
| rosa_rugosa | Rorug05G0494200 Rorug05G0591000.1 Rorug06G0311100 |
| rosa_samantha | Rh1AG035400 Rh1DG171200 Rh2CG228600 Rh2DG233100 Rh6AG423800 Rh6BG478500 Rh6CG436800 Rh6DG423900 |
| rosa_wichuraiana | Rw2G009110 Rw2G017410 Rw6G036710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 205 |
| AfaI | GTAC | 2 cut(s) | 160, 347 |
| AflIII | ACRYGT | 1 cut(s) | 54 |
| AgsI | TTSAA | 4 cut(s) | 170, 277, 300, 329 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 28, 60 |
| Alw21I | GWGCWC | 1 cut(s) | 135 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 324 |
| Bbv12I | GWGCWC | 1 cut(s) | 135 |
| BccI | CCATC | 1 cut(s) | 357 |
| BclI | TGATCA | 1 cut(s) | 213 |
| BfmI | CTRYAG | 1 cut(s) | 334 |
| BsaJI | CCNNGG | 1 cut(s) | 154 |
| BseDI | CCNNGG | 1 cut(s) | 154 |
| BseGI | GGATG | 1 cut(s) | 33 |
| BseMII | CTCAG | 1 cut(s) | 9 |
| BseYI | CCCAGC | 1 cut(s) | 23 |
| BsiHKAI | GWGCWC | 1 cut(s) | 135 |
| Bsp1286I | GDGCHC | 1 cut(s) | 135 |
| Bsp143I | GATC | 1 cut(s) | 213 |
| Bsp19I | CCATGG | 1 cut(s) | 154 |
| BspCNI | CTCAG | 1 cut(s) | 10 |
| BssECI | CCNNGG | 1 cut(s) | 154 |
| BssMI | GATC | 1 cut(s) | 213 |
| BssT1I | CCWWGG | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 165 |
| BstDEI | CTNAG | 1 cut(s) | 18 |
| BstDSI | CCRYGG | 1 cut(s) | 154 |
| BstF5I | GGATG | 1 cut(s) | 33 |
| BstKTI | GATC | 1 cut(s) | 216 |
| BstMBI | GATC | 1 cut(s) | 213 |
| BstNSI | RCATGY | 2 cut(s) | 58, 236 |
| BstSFI | CTRYAG | 1 cut(s) | 334 |
| BtgI | CCRYGG | 1 cut(s) | 154 |
| BtsCI | GGATG | 1 cut(s) | 33 |
| BtsI | GCAGTG | 1 cut(s) | 243 |
| BtsIMutI | CAGTG | 2 cut(s) | 15, 243 |
| Csp6I | GTAC | 2 cut(s) | 159, 346 |
| CviAII | CATG | 5 cut(s) | 55, 145, 155, 211, 233 |
| CviJI | RGCY | 3 cut(s) | 23, 34, 151 |
| CviKI_1 | RGCY | 3 cut(s) | 23, 34, 151 |
| CviQI | GTAC | 2 cut(s) | 159, 346 |
| DdeI | CTNAG | 1 cut(s) | 18 |
| DpnI | GATC | 1 cut(s) | 215 |
| DpnII | GATC | 1 cut(s) | 213 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 205 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 205 |
| Eam1104I | CTCTTC | 1 cut(s) | 165 |
| EarI | CTCTTC | 1 cut(s) | 165 |
| Eco130I | CCWWGG | 1 cut(s) | 154 |
| EcoT14I | CCWWGG | 1 cut(s) | 154 |
| ErhI | CCWWGG | 1 cut(s) | 154 |
| FaeI | CATG | 5 cut(s) | 58, 148, 158, 214, 236 |
| FaiI | YATR | 8 cut(s) | 50, 56, 77, 146, 156, 177, 212, 234 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 309, 341 |
| FatI | CATG | 5 cut(s) | 54, 144, 154, 210, 232 |
| FbaI | TGATCA | 1 cut(s) | 213 |
| FokI | GGATG | 1 cut(s) | 40 |
| GsaI | CCCAGC | 1 cut(s) | 27 |
| Hin1II | CATG | 5 cut(s) | 58, 148, 158, 214, 236 |
| HinfI | GANTC | 2 cut(s) | 273, 289 |
| Hpy188I | TCNGA | 1 cut(s) | 91 |
| Hpy188III | TCNNGA | 3 cut(s) | 191, 217, 277 |
| HpyCH4V | TGCA | 1 cut(s) | 236 |
| HpyF3I | CTNAG | 1 cut(s) | 18 |
| Hsp92II | CATG | 5 cut(s) | 58, 148, 158, 214, 236 |
| Ksp22I | TGATCA | 1 cut(s) | 213 |
| Kzo9I | GATC | 1 cut(s) | 213 |
| LmnI | GCTCC | 1 cut(s) | 16 |
| LpnPI | CCDG | 1 cut(s) | 9 |
| MalI | GATC | 1 cut(s) | 215 |
| MboI | GATC | 1 cut(s) | 213 |
| MboII | GAAGA | 2 cut(s) | 182, 193 |
| MhlI | GDGCHC | 1 cut(s) | 135 |
| MluCI | AATT | 2 cut(s) | 40, 357 |
| MnlI | CCTC | 2 cut(s) | 13, 85 |
| MroXI | GAANNNNTTC | 1 cut(s) | 324 |
| MseI | TTAA | 2 cut(s) | 255, 261 |
| NcoI | CCATGG | 1 cut(s) | 154 |
| NdeII | GATC | 1 cut(s) | 213 |
| NlaIII | CATG | 5 cut(s) | 58, 148, 158, 214, 236 |
| NspI | RCATGY | 2 cut(s) | 58, 236 |
| PciI | ACATGT | 1 cut(s) | 54 |
| PdmI | GAANNNNTTC | 1 cut(s) | 324 |
| PfeI | GAWTC | 2 cut(s) | 273, 289 |
| PscI | ACATGT | 1 cut(s) | 54 |
| PspFI | CCCAGC | 1 cut(s) | 23 |
| RsaI | GTAC | 2 cut(s) | 160, 347 |
| RsaNI | GTAC | 2 cut(s) | 159, 346 |
| SaqAI | TTAA | 2 cut(s) | 255, 261 |
| Sau3AI | GATC | 1 cut(s) | 213 |
| SduI | GDGCHC | 1 cut(s) | 135 |
| SetI | ASST | 1 cut(s) | 9 |
| SfcI | CTRYAG | 1 cut(s) | 334 |
| Sse9I | AATT | 2 cut(s) | 40, 357 |
| StyI | CCWWGG | 1 cut(s) | 154 |
| TaqI | TCGA | 1 cut(s) | 59 |
| TasI | AATT | 2 cut(s) | 40, 357 |
| TfiI | GAWTC | 2 cut(s) | 273, 289 |
| Tru1I | TTAA | 2 cut(s) | 255, 261 |
| Tru9I | TTAA | 2 cut(s) | 255, 261 |
| TscAI | CASTG | 2 cut(s) | 22, 243 |
| TspDTI | ATGAA | 3 cut(s) | 44, 65, 161 |
| TspRI | CASTG | 2 cut(s) | 22, 243 |
| XceI | RCATGY | 2 cut(s) | 58, 236 |
| XmnI | GAANNNNTTC | 1 cut(s) | 324 |