Glycosyl hydrolases family 28
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1260900.v1.1 |
| pyrus_communis | pycom15g11180 |
| rosa_chinensis | RchiOBHm_Chr2g0146311 RchiOBHm_Chr3g0481611 |
| rosa_multiflora | Rmu_sc0010155.1_g000002 Rmu_ssc0000420.1_g000030 |
| rosa_roxburghii | Rroxscaffold_153G00436760 Rroxscaffold_1G00032790 Rroxscaffold_2G00104840 |
| rosa_rugosa | Rorug06G0113100 |
| rosa_samantha | Rh2AG413400 Rh2DG433300 Rh4CG317800 Rh4DG260000 Rh4DG299500 |
| rosa_wichuraiana | Rw4G022340 Rw4G025610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 199 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 56 |
| AciI | CCGC | 1 cut(s) | 392 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AcsI | RAATTY | 1 cut(s) | 52 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 56 |
| AgsI | TTSAA | 2 cut(s) | 229, 271 |
| AluBI | AGCT | 4 cut(s) | 8, 158, 167, 349 |
| AluI | AGCT | 4 cut(s) | 8, 158, 167, 349 |
| ApeKI | GCWGC | 1 cut(s) | 194 |
| ApoI | RAATTY | 1 cut(s) | 52 |
| AspLEI | GCGC | 2 cut(s) | 92, 295 |
| BbvI | GCAGC | 1 cut(s) | 181 |
| BccI | CCATC | 3 cut(s) | 324, 347, 382 |
| BceAI | ACGGC | 1 cut(s) | 30 |
| BclI | TGATCA | 1 cut(s) | 169 |
| BfaI | CTAG | 2 cut(s) | 155, 350 |
| BfoI | RGCGCY | 1 cut(s) | 93 |
| BfuAI | ACCTGC | 1 cut(s) | 199 |
| BisI | GCNGC | 1 cut(s) | 195 |
| BlsI | GCNGC | 1 cut(s) | 196 |
| Bpu10I | CCTNAGC | 1 cut(s) | 24 |
| BpuEI | CTTGAG | 1 cut(s) | 147 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 366, 396 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseMII | CTCAG | 2 cut(s) | 15, 134 |
| BseXI | GCAGC | 1 cut(s) | 181 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 56 |
| Bsp143I | GATC | 2 cut(s) | 169, 180 |
| BspACI | CCGC | 1 cut(s) | 392 |
| BspCNI | CTCAG | 2 cut(s) | 16, 133 |
| BspMI | ACCTGC | 1 cut(s) | 199 |
| BssMI | GATC | 2 cut(s) | 169, 180 |
| BstDEI | CTNAG | 4 cut(s) | 24, 120, 255, 345 |
| BstH2I | RGCGCY | 1 cut(s) | 93 |
| BstHHI | GCGC | 2 cut(s) | 92, 295 |
| BstKTI | GATC | 2 cut(s) | 172, 183 |
| BstMBI | GATC | 2 cut(s) | 169, 180 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 143, 164, 173 |
| BstV1I | GCAGC | 1 cut(s) | 181 |
| BveI | ACCTGC | 1 cut(s) | 199 |
| CfoI | GCGC | 2 cut(s) | 92, 295 |
| CviAII | CATG | 4 cut(s) | 138, 290, 364, 403 |
| DdeI | CTNAG | 4 cut(s) | 24, 120, 255, 345 |
| DpnI | GATC | 2 cut(s) | 171, 182 |
| DpnII | GATC | 2 cut(s) | 169, 180 |
| FaeI | CATG | 4 cut(s) | 141, 293, 367, 406 |
| FaiI | YATR | 9 cut(s) | 87, 110, 139, 188, 239, 282, 291, 365, 404 |
| FatI | CATG | 4 cut(s) | 137, 289, 363, 402 |
| FbaI | TGATCA | 1 cut(s) | 169 |
| Fnu4HI | GCNGC | 1 cut(s) | 195 |
| Fsp4HI | GCNGC | 1 cut(s) | 195 |
| FspBI | CTAG | 2 cut(s) | 155, 350 |
| GlaI | GCGC | 2 cut(s) | 91, 294 |
| GluI | GCNGC | 1 cut(s) | 195 |
| HaeII | RGCGCY | 1 cut(s) | 93 |
| HhaI | GCGC | 2 cut(s) | 92, 295 |
| Hin1II | CATG | 4 cut(s) | 141, 293, 367, 406 |
| Hin6I | GCGC | 2 cut(s) | 90, 293 |
| HinP1I | GCGC | 2 cut(s) | 90, 293 |
| HincII | GTYRAC | 1 cut(s) | 73 |
| HindII | GTYRAC | 1 cut(s) | 73 |
| HinfI | GANTC | 3 cut(s) | 116, 244, 259 |
| HpaI | GTTAAC | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy188III | TCNNGA | 1 cut(s) | 57 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| HpyCH4IV | ACGT | 1 cut(s) | 75 |
| HpyCH4V | TGCA | 2 cut(s) | 197, 214 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 143, 164, 173 |
| HpyF3I | CTNAG | 4 cut(s) | 24, 120, 255, 345 |
| HpySE526I | ACGT | 1 cut(s) | 75 |
| Hsp92II | CATG | 4 cut(s) | 141, 293, 367, 406 |
| HspAI | GCGC | 2 cut(s) | 90, 293 |
| Ksp22I | TGATCA | 1 cut(s) | 169 |
| KspAI | GTTAAC | 1 cut(s) | 73 |
| Kzo9I | GATC | 2 cut(s) | 169, 180 |
| LmnI | GCTCC | 1 cut(s) | 5 |
| LpnPI | CCDG | 6 cut(s) | 36, 42, 107, 163, 204, 221 |
| Lsp1109I | GCAGC | 1 cut(s) | 181 |
| MaeI | CTAG | 2 cut(s) | 155, 350 |
| MaeII | ACGT | 1 cut(s) | 75 |
| MaeIII | GTNAC | 2 cut(s) | 76, 245 |
| MalI | GATC | 2 cut(s) | 171, 182 |
| MboI | GATC | 2 cut(s) | 169, 180 |
| MluCI | AATT | 1 cut(s) | 52 |
| MlyI | GAGTC | 1 cut(s) | 253 |
| MmeI | TCCRAC | 1 cut(s) | 76 |
| MnlI | CCTC | 4 cut(s) | 39, 55, 157, 348 |
| MseI | TTAA | 1 cut(s) | 72 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 143, 164, 173 |
| NdeII | GATC | 2 cut(s) | 169, 180 |
| NlaIII | CATG | 4 cut(s) | 141, 293, 367, 406 |
| NmuCI | GTSAC | 1 cut(s) | 245 |
| PfeI | GAWTC | 2 cut(s) | 116, 259 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 196 |
| PleI | GAGTC | 1 cut(s) | 252 |
| PpsI | GAGTC | 1 cut(s) | 252 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| SaqAI | TTAA | 1 cut(s) | 72 |
| SatI | GCNGC | 1 cut(s) | 195 |
| Sau3AI | GATC | 2 cut(s) | 169, 180 |
| SchI | GAGTC | 1 cut(s) | 253 |
| SetI | ASST | 8 cut(s) | 10, 78, 160, 169, 193, 313, 340, 351 |
| SmlI | CTYRAG | 1 cut(s) | 162 |
| SmoI | CTYRAG | 1 cut(s) | 162 |
| Sse9I | AATT | 1 cut(s) | 52 |
| SsiI | CCGC | 1 cut(s) | 392 |
| SspMI | CTAG | 2 cut(s) | 155, 350 |
| TaiI | ACGT | 1 cut(s) | 78 |
| TaqI | TCGA | 1 cut(s) | 262 |
| TasI | AATT | 1 cut(s) | 52 |
| TfiI | GAWTC | 2 cut(s) | 116, 259 |
| Tru1I | TTAA | 1 cut(s) | 72 |
| Tru9I | TTAA | 1 cut(s) | 72 |
| TseFI | GTSAC | 1 cut(s) | 245 |
| TseI | GCWGC | 1 cut(s) | 194 |
| Tsp45I | GTSAC | 1 cut(s) | 245 |
| TspGWI | ACGGA | 1 cut(s) | 224 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 56 |
| XapI | RAATTY | 1 cut(s) | 52 |
| XspI | CTAG | 2 cut(s) | 155, 350 |