Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1260900.v1.1 |
| pyrus_communis | pycom15g11180 |
| rosa_chinensis | RchiOBHm_Chr2g0146311 RchiOBHm_Chr3g0481611 |
| rosa_multiflora | Rmu_sc0010155.1_g000002 Rmu_ssc0000420.1_g000030 |
| rosa_roxburghii | Rroxscaffold_153G00436760 Rroxscaffold_1G00032790 Rroxscaffold_2G00104840 |
| rosa_rugosa | Rorug06G0113100 |
| rosa_samantha | Rh2AG413400 Rh2DG433300 Rh4CG317800 Rh4DG260000 Rh4DG299500 |
| rosa_wichuraiana | Rw4G022340 Rw4G025610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 302 |
| AcoI | YGGCCR | 1 cut(s) | 267 |
| AcsI | RAATTY | 3 cut(s) | 54, 142, 149 |
| AcuI | CTGAAG | 1 cut(s) | 81 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 101, 220 |
| AgsI | TTSAA | 2 cut(s) | 127, 157 |
| AluBI | AGCT | 2 cut(s) | 20, 169 |
| AluI | AGCT | 2 cut(s) | 20, 169 |
| AlwI | GGATC | 1 cut(s) | 302 |
| Ama87I | CYCGRG | 1 cut(s) | 178 |
| AoxI | GGCC | 2 cut(s) | 103, 267 |
| ApoI | RAATTY | 3 cut(s) | 54, 142, 149 |
| AsuC2I | CCSGG | 1 cut(s) | 195 |
| AsuHPI | GGTGA | 1 cut(s) | 84 |
| AvaI | CYCGRG | 1 cut(s) | 178 |
| BalI | TGGCCA | 1 cut(s) | 269 |
| BccI | CCATC | 1 cut(s) | 259 |
| BcnI | CCSGG | 1 cut(s) | 195 |
| Bme1390I | CCNGG | 1 cut(s) | 195 |
| BmeT110I | CYCGRG | 1 cut(s) | 178 |
| BmiI | GGNNCC | 2 cut(s) | 133, 187 |
| BmrFI | CCNGG | 1 cut(s) | 195 |
| BpuMI | CCSGG | 1 cut(s) | 195 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 101, 220 |
| BseGI | GGATG | 1 cut(s) | 169 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 101, 220 |
| BshFI | GGCC | 2 cut(s) | 105, 269 |
| BsiHKCI | CYCGRG | 1 cut(s) | 178 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BslFI | GGGAC | 2 cut(s) | 85, 237 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 101, 220 |
| BsmFI | GGGAC | 2 cut(s) | 85, 237 |
| BsnI | GGCC | 2 cut(s) | 105, 269 |
| BsoBI | CYCGRG | 1 cut(s) | 178 |
| Bsp143I | GATC | 1 cut(s) | 294 |
| BspANI | GGCC | 2 cut(s) | 105, 269 |
| BspHI | TCATGA | 1 cut(s) | 231 |
| BspLI | GGNNCC | 2 cut(s) | 133, 187 |
| BspPI | GGATC | 1 cut(s) | 302 |
| BssMI | GATC | 1 cut(s) | 294 |
| Bst6I | CTCTTC | 1 cut(s) | 304 |
| BstEII | GGTNACC | 1 cut(s) | 90 |
| BstF5I | GGATG | 1 cut(s) | 169 |
| BstKTI | GATC | 1 cut(s) | 297 |
| BstMBI | GATC | 1 cut(s) | 294 |
| BstPI | GGTNACC | 1 cut(s) | 90 |
| BstSCI | CCNGG | 1 cut(s) | 193 |
| BstX2I | RGATCY | 1 cut(s) | 294 |
| BstYI | RGATCY | 1 cut(s) | 294 |
| BsuRI | GGCC | 2 cut(s) | 105, 269 |
| BtsCI | GGATG | 1 cut(s) | 169 |
| CciI | TCATGA | 1 cut(s) | 231 |
| CviAII | CATG | 1 cut(s) | 232 |
| CviJI | RGCY | 6 cut(s) | 20, 105, 169, 175, 240, 269 |
| CviKI_1 | RGCY | 6 cut(s) | 20, 105, 169, 175, 240, 269 |
| DpnI | GATC | 1 cut(s) | 296 |
| DpnII | GATC | 1 cut(s) | 294 |
| EaeI | YGGCCR | 1 cut(s) | 267 |
| Eam1104I | CTCTTC | 1 cut(s) | 304 |
| EarI | CTCTTC | 1 cut(s) | 304 |
| Eco57I | CTGAAG | 1 cut(s) | 81 |
| Eco88I | CYCGRG | 1 cut(s) | 178 |
| Eco91I | GGTNACC | 1 cut(s) | 90 |
| EcoO65I | GGTNACC | 1 cut(s) | 90 |
| EcoRI | GAATTC | 1 cut(s) | 54 |
| FaeI | CATG | 1 cut(s) | 235 |
| FaiI | YATR | 3 cut(s) | 110, 203, 233 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 283 |
| FaqI | GGGAC | 2 cut(s) | 85, 237 |
| FatI | CATG | 1 cut(s) | 231 |
| FokI | GGATG | 1 cut(s) | 176 |
| HaeIII | GGCC | 2 cut(s) | 105, 269 |
| HapII | CCGG | 1 cut(s) | 194 |
| Hin1II | CATG | 1 cut(s) | 235 |
| HpaII | CCGG | 1 cut(s) | 194 |
| HphI | GGTGA | 1 cut(s) | 84 |
| Hpy188III | TCNNGA | 3 cut(s) | 25, 178, 232 |
| HpyAV | CCTTC | 3 cut(s) | 22, 105, 285 |
| HpyCH4V | TGCA | 1 cut(s) | 119 |
| Hsp92II | CATG | 1 cut(s) | 235 |
| Kzo9I | GATC | 1 cut(s) | 294 |
| LmnI | GCTCC | 1 cut(s) | 17 |
| LpnPI | CCDG | 3 cut(s) | 10, 84, 207 |
| MaeIII | GTNAC | 1 cut(s) | 90 |
| MalI | GATC | 1 cut(s) | 296 |
| MboI | GATC | 1 cut(s) | 294 |
| MboII | GAAGA | 1 cut(s) | 291 |
| MflI | RGATCY | 1 cut(s) | 294 |
| MlsI | TGGCCA | 1 cut(s) | 269 |
| MluCI | AATT | 4 cut(s) | 54, 142, 149, 283 |
| MluNI | TGGCCA | 1 cut(s) | 269 |
| MnlI | CCTC | 2 cut(s) | 34, 116 |
| Mox20I | TGGCCA | 1 cut(s) | 269 |
| MscI | TGGCCA | 1 cut(s) | 269 |
| MseI | TTAA | 1 cut(s) | 248 |
| Msp20I | TGGCCA | 1 cut(s) | 269 |
| MspI | CCGG | 1 cut(s) | 194 |
| MspR9I | CCNGG | 1 cut(s) | 195 |
| NciI | CCSGG | 1 cut(s) | 195 |
| NdeII | GATC | 1 cut(s) | 294 |
| NlaIII | CATG | 1 cut(s) | 235 |
| NlaIV | GGNNCC | 2 cut(s) | 133, 187 |
| NmeAIII | GCCGAG | 1 cut(s) | 266 |
| NmuCI | GTSAC | 1 cut(s) | 90 |
| PaeR7I | CTCGAG | 1 cut(s) | 178 |
| PagI | TCATGA | 1 cut(s) | 231 |
| PspEI | GGTNACC | 1 cut(s) | 90 |
| PspN4I | GGNNCC | 2 cut(s) | 133, 187 |
| PsuI | RGATCY | 1 cut(s) | 294 |
| SaqAI | TTAA | 1 cut(s) | 248 |
| Sau3AI | GATC | 1 cut(s) | 294 |
| ScrFI | CCNGG | 1 cut(s) | 195 |
| SetI | ASST | 9 cut(s) | 12, 22, 45, 97, 103, 125, 171, 275, 311 |
| Sfr274I | CTCGAG | 1 cut(s) | 178 |
| SlaI | CTCGAG | 1 cut(s) | 178 |
| SmlI | CTYRAG | 1 cut(s) | 178 |
| SmoI | CTYRAG | 1 cut(s) | 178 |
| Sse9I | AATT | 4 cut(s) | 54, 142, 149, 283 |
| StyD4I | CCNGG | 1 cut(s) | 193 |
| TaqI | TCGA | 1 cut(s) | 179 |
| TasI | AATT | 4 cut(s) | 54, 142, 149, 283 |
| Tru1I | TTAA | 1 cut(s) | 248 |
| Tru9I | TTAA | 1 cut(s) | 248 |
| TseFI | GTSAC | 1 cut(s) | 90 |
| Tsp45I | GTSAC | 1 cut(s) | 90 |
| XapI | RAATTY | 3 cut(s) | 54, 142, 149 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 142 |
| XhoI | CTCGAG | 1 cut(s) | 178 |