Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1260900.v1.1 |
| pyrus_communis | pycom15g11180 |
| rosa_chinensis | RchiOBHm_Chr2g0146311 RchiOBHm_Chr3g0481611 |
| rosa_multiflora | Rmu_sc0010155.1_g000002 Rmu_ssc0000420.1_g000030 |
| rosa_roxburghii | Rroxscaffold_153G00436760 Rroxscaffold_1G00032790 Rroxscaffold_2G00104840 |
| rosa_rugosa | Rorug06G0113100 |
| rosa_samantha | Rh2AG413400 Rh2DG433300 Rh4CG317800 Rh4DG260000 Rh4DG299500 |
| rosa_wichuraiana | Rw4G022340 Rw4G025610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 44 |
| AclI | AACGTT | 1 cut(s) | 144 |
| AclWI | GGATC | 1 cut(s) | 497 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 5 cut(s) | 40, 76, 249, 337, 344 |
| AcuI | CTGAAG | 1 cut(s) | 276 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 44, 296, 415 |
| AgsI | TTSAA | 3 cut(s) | 62, 322, 352 |
| AluBI | AGCT | 2 cut(s) | 215, 364 |
| AluI | AGCT | 2 cut(s) | 215, 364 |
| Alw26I | GTCTC | 1 cut(s) | 195 |
| AlwI | GGATC | 1 cut(s) | 497 |
| Ama87I | CYCGRG | 1 cut(s) | 373 |
| AoxI | GGCC | 2 cut(s) | 298, 462 |
| ApoI | RAATTY | 5 cut(s) | 40, 76, 249, 337, 344 |
| AspLEI | GCGC | 1 cut(s) | 161 |
| AsuC2I | CCSGG | 1 cut(s) | 390 |
| AsuHPI | GGTGA | 1 cut(s) | 279 |
| AvaI | CYCGRG | 1 cut(s) | 373 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BccI | CCATC | 1 cut(s) | 454 |
| BcnI | CCSGG | 1 cut(s) | 390 |
| BcoDI | GTCTC | 1 cut(s) | 195 |
| BfoI | RGCGCY | 1 cut(s) | 162 |
| Bme1390I | CCNGG | 1 cut(s) | 390 |
| BmeT110I | CYCGRG | 1 cut(s) | 373 |
| BmiI | GGNNCC | 2 cut(s) | 328, 382 |
| BmrFI | CCNGG | 1 cut(s) | 390 |
| Bpu10I | CCTNAGC | 1 cut(s) | 12 |
| BpuMI | CCSGG | 1 cut(s) | 390 |
| BsaI | GGTCTC | 1 cut(s) | 195 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 44, 296, 415 |
| BseGI | GGATG | 2 cut(s) | 76, 364 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 44, 296, 415 |
| BseMII | CTCAG | 1 cut(s) | 203 |
| BshFI | GGCC | 2 cut(s) | 300, 464 |
| BsiHKCI | CYCGRG | 1 cut(s) | 373 |
| BsiSI | CCGG | 1 cut(s) | 389 |
| BslFI | GGGAC | 2 cut(s) | 280, 432 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 44, 296, 415 |
| BsmAI | GTCTC | 1 cut(s) | 195 |
| BsmFI | GGGAC | 2 cut(s) | 280, 432 |
| BsnI | GGCC | 2 cut(s) | 300, 464 |
| Bso31I | GGTCTC | 1 cut(s) | 195 |
| BsoBI | CYCGRG | 1 cut(s) | 373 |
| Bsp143I | GATC | 1 cut(s) | 489 |
| BspANI | GGCC | 2 cut(s) | 300, 464 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspHI | TCATGA | 1 cut(s) | 426 |
| BspLI | GGNNCC | 2 cut(s) | 328, 382 |
| BspPI | GGATC | 1 cut(s) | 497 |
| BspTNI | GGTCTC | 1 cut(s) | 195 |
| BssMI | GATC | 1 cut(s) | 489 |
| Bst6I | CTCTTC | 1 cut(s) | 499 |
| BstDEI | CTNAG | 2 cut(s) | 12, 189 |
| BstEII | GGTNACC | 1 cut(s) | 285 |
| BstF5I | GGATG | 2 cut(s) | 76, 364 |
| BstH2I | RGCGCY | 1 cut(s) | 162 |
| BstHHI | GCGC | 1 cut(s) | 161 |
| BstKTI | GATC | 1 cut(s) | 492 |
| BstMAI | GTCTC | 1 cut(s) | 195 |
| BstMBI | GATC | 1 cut(s) | 489 |
| BstPI | GGTNACC | 1 cut(s) | 285 |
| BstSCI | CCNGG | 1 cut(s) | 388 |
| BstX2I | RGATCY | 1 cut(s) | 489 |
| BstYI | RGATCY | 1 cut(s) | 489 |
| BsuRI | GGCC | 2 cut(s) | 300, 464 |
| BtsCI | GGATG | 2 cut(s) | 76, 364 |
| BtsIMutI | CAGTG | 1 cut(s) | 197 |
| CciI | TCATGA | 1 cut(s) | 426 |
| CfoI | GCGC | 1 cut(s) | 161 |
| CviAII | CATG | 3 cut(s) | 117, 196, 427 |
| CviJI | RGCY | 9 cut(s) | 10, 16, 32, 215, 300, 364, 370, 435, 464 |
| CviKI_1 | RGCY | 9 cut(s) | 10, 16, 32, 215, 300, 364, 370, 435, 464 |
| DdeI | CTNAG | 2 cut(s) | 12, 189 |
| DpnI | GATC | 1 cut(s) | 491 |
| DpnII | GATC | 1 cut(s) | 489 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 1 cut(s) | 499 |
| EarI | CTCTTC | 1 cut(s) | 499 |
| Eco31I | GGTCTC | 1 cut(s) | 195 |
| Eco57I | CTGAAG | 1 cut(s) | 276 |
| Eco88I | CYCGRG | 1 cut(s) | 373 |
| Eco91I | GGTNACC | 1 cut(s) | 285 |
| EcoO65I | GGTNACC | 1 cut(s) | 285 |
| EcoRI | GAATTC | 1 cut(s) | 249 |
| FaeI | CATG | 3 cut(s) | 120, 199, 430 |
| FaiI | YATR | 9 cut(s) | 51, 103, 118, 156, 179, 197, 305, 398, 428 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 478 |
| FaqI | GGGAC | 2 cut(s) | 280, 432 |
| FatI | CATG | 3 cut(s) | 116, 195, 426 |
| FokI | GGATG | 2 cut(s) | 83, 371 |
| GlaI | GCGC | 1 cut(s) | 160 |
| HaeII | RGCGCY | 1 cut(s) | 162 |
| HaeIII | GGCC | 2 cut(s) | 300, 464 |
| HapII | CCGG | 1 cut(s) | 389 |
| HhaI | GCGC | 1 cut(s) | 161 |
| Hin1II | CATG | 3 cut(s) | 120, 199, 430 |
| Hin6I | GCGC | 1 cut(s) | 159 |
| HinP1I | GCGC | 1 cut(s) | 159 |
| HincII | GTYRAC | 1 cut(s) | 142 |
| HindII | GTYRAC | 1 cut(s) | 142 |
| HinfI | GANTC | 2 cut(s) | 106, 185 |
| HpaI | GTTAAC | 1 cut(s) | 142 |
| HpaII | CCGG | 1 cut(s) | 389 |
| HphI | GGTGA | 1 cut(s) | 279 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy188III | TCNNGA | 3 cut(s) | 220, 373, 427 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyAV | CCTTC | 4 cut(s) | 61, 217, 300, 480 |
| HpyCH4IV | ACGT | 1 cut(s) | 144 |
| HpyCH4V | TGCA | 3 cut(s) | 126, 195, 314 |
| HpyF3I | CTNAG | 2 cut(s) | 12, 189 |
| HpySE526I | ACGT | 1 cut(s) | 144 |
| Hsp92II | CATG | 3 cut(s) | 120, 199, 430 |
| HspAI | GCGC | 1 cut(s) | 159 |
| KspAI | GTTAAC | 1 cut(s) | 142 |
| Kzo9I | GATC | 1 cut(s) | 489 |
| LmnI | GCTCC | 1 cut(s) | 212 |
| LpnPI | CCDG | 4 cut(s) | 30, 205, 279, 402 |
| MaeII | ACGT | 1 cut(s) | 144 |
| MaeIII | GTNAC | 2 cut(s) | 145, 285 |
| MalI | GATC | 1 cut(s) | 491 |
| MboI | GATC | 1 cut(s) | 489 |
| MboII | GAAGA | 1 cut(s) | 486 |
| MfeI | CAATTG | 1 cut(s) | 85 |
| MflI | RGATCY | 1 cut(s) | 489 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluCI | AATT | 7 cut(s) | 40, 76, 85, 249, 337, 344, 478 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MmeI | TCCRAC | 1 cut(s) | 145 |
| MnlI | CCTC | 4 cut(s) | 27, 43, 229, 311 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MseI | TTAA | 2 cut(s) | 141, 443 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspI | CCGG | 1 cut(s) | 389 |
| MspR9I | CCNGG | 1 cut(s) | 390 |
| MunI | CAATTG | 1 cut(s) | 85 |
| NciI | CCSGG | 1 cut(s) | 390 |
| NdeII | GATC | 1 cut(s) | 489 |
| NlaIII | CATG | 3 cut(s) | 120, 199, 430 |
| NlaIV | GGNNCC | 2 cut(s) | 328, 382 |
| NmeAIII | GCCGAG | 1 cut(s) | 461 |
| NmuCI | GTSAC | 1 cut(s) | 285 |
| PaeR7I | CTCGAG | 1 cut(s) | 373 |
| PagI | TCATGA | 1 cut(s) | 426 |
| PfeI | GAWTC | 2 cut(s) | 106, 185 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 44 |
| Psp1406I | AACGTT | 1 cut(s) | 144 |
| PspEI | GGTNACC | 1 cut(s) | 285 |
| PspN4I | GGNNCC | 2 cut(s) | 328, 382 |
| PsuI | RGATCY | 1 cut(s) | 489 |
| SaqAI | TTAA | 2 cut(s) | 141, 443 |
| Sau3AI | GATC | 1 cut(s) | 489 |
| ScrFI | CCNGG | 1 cut(s) | 390 |
| Sfr274I | CTCGAG | 1 cut(s) | 373 |
| SlaI | CTCGAG | 1 cut(s) | 373 |
| SmlI | CTYRAG | 1 cut(s) | 373 |
| SmoI | CTYRAG | 1 cut(s) | 373 |
| Sse9I | AATT | 7 cut(s) | 40, 76, 85, 249, 337, 344, 478 |
| StyD4I | CCNGG | 1 cut(s) | 388 |
| TaiI | ACGT | 1 cut(s) | 147 |
| TaqI | TCGA | 1 cut(s) | 374 |
| TasI | AATT | 7 cut(s) | 40, 76, 85, 249, 337, 344, 478 |
| TfiI | GAWTC | 2 cut(s) | 106, 185 |
| Tru1I | TTAA | 2 cut(s) | 141, 443 |
| Tru9I | TTAA | 2 cut(s) | 141, 443 |
| TscAI | CASTG | 1 cut(s) | 197 |
| TseFI | GTSAC | 1 cut(s) | 285 |
| Tsp45I | GTSAC | 1 cut(s) | 285 |
| TspRI | CASTG | 1 cut(s) | 197 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 44 |
| XapI | RAATTY | 5 cut(s) | 40, 76, 249, 337, 344 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 337 |
| XhoI | CTCGAG | 1 cut(s) | 373 |