Glycosyl hydrolases family 28
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1260900.v1.1 |
| pyrus_communis | pycom15g11180 |
| rosa_chinensis | RchiOBHm_Chr2g0146311 RchiOBHm_Chr3g0481611 |
| rosa_multiflora | Rmu_sc0010155.1_g000002 Rmu_ssc0000420.1_g000030 |
| rosa_roxburghii | Rroxscaffold_153G00436760 Rroxscaffold_1G00032790 Rroxscaffold_2G00104840 |
| rosa_rugosa | Rorug06G0113100 |
| rosa_samantha | Rh2AG413400 Rh2DG433300 Rh4CG317800 Rh4DG260000 Rh4DG299500 |
| rosa_wichuraiana | Rw4G022340 Rw4G025610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 22 |
| AflIII | ACRYGT | 1 cut(s) | 254 |
| AgsI | TTSAA | 2 cut(s) | 8, 244 |
| AluBI | AGCT | 2 cut(s) | 173, 182 |
| AluI | AGCT | 2 cut(s) | 173, 182 |
| ApeKI | GCWGC | 1 cut(s) | 209 |
| ApoI | RAATTY | 1 cut(s) | 22 |
| BbvI | GCAGC | 1 cut(s) | 196 |
| BclI | TGATCA | 1 cut(s) | 184 |
| BfaI | CTAG | 1 cut(s) | 170 |
| BisI | GCNGC | 1 cut(s) | 210 |
| BlsI | GCNGC | 1 cut(s) | 211 |
| BpuEI | CTTGAG | 1 cut(s) | 162 |
| BseMII | CTCAG | 1 cut(s) | 149 |
| BseXI | GCAGC | 1 cut(s) | 196 |
| Bsp143I | GATC | 2 cut(s) | 184, 195 |
| BspCNI | CTCAG | 1 cut(s) | 148 |
| BssMI | GATC | 2 cut(s) | 184, 195 |
| Bst4CI | ACNGT | 1 cut(s) | 109 |
| BstC8I | GCNNGC | 1 cut(s) | 207 |
| BstDEI | CTNAG | 1 cut(s) | 135 |
| BstKTI | GATC | 2 cut(s) | 187, 198 |
| BstMBI | GATC | 2 cut(s) | 184, 195 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 179, 188 |
| BstNSI | RCATGY | 1 cut(s) | 258 |
| BstV1I | GCAGC | 1 cut(s) | 196 |
| BtsIMutI | CAGTG | 1 cut(s) | 105 |
| Cac8I | GCNNGC | 1 cut(s) | 207 |
| CviAII | CATG | 4 cut(s) | 63, 153, 202, 255 |
| CviJI | RGCY | 4 cut(s) | 140, 161, 173, 182 |
| CviKI_1 | RGCY | 4 cut(s) | 140, 161, 173, 182 |
| DdeI | CTNAG | 1 cut(s) | 135 |
| DpnI | GATC | 2 cut(s) | 186, 197 |
| DpnII | GATC | 2 cut(s) | 184, 195 |
| FaeI | CATG | 4 cut(s) | 66, 156, 205, 258 |
| FaiI | YATR | 7 cut(s) | 49, 64, 102, 125, 154, 203, 256 |
| FatI | CATG | 4 cut(s) | 62, 152, 201, 254 |
| FbaI | TGATCA | 1 cut(s) | 184 |
| Fnu4HI | GCNGC | 1 cut(s) | 210 |
| Fsp4HI | GCNGC | 1 cut(s) | 210 |
| FspBI | CTAG | 1 cut(s) | 170 |
| GluI | GCNGC | 1 cut(s) | 210 |
| Hin1II | CATG | 4 cut(s) | 66, 156, 205, 258 |
| HinfI | GANTC | 2 cut(s) | 52, 131 |
| HpyAV | CCTTC | 1 cut(s) | 7 |
| HpyCH4III | ACNGT | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 212, 229 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 179, 188 |
| HpyF3I | CTNAG | 1 cut(s) | 135 |
| Hsp92II | CATG | 4 cut(s) | 66, 156, 205, 258 |
| Ksp22I | TGATCA | 1 cut(s) | 184 |
| Kzo9I | GATC | 2 cut(s) | 184, 195 |
| LpnPI | CCDG | 4 cut(s) | 122, 178, 219, 236 |
| Lsp1109I | GCAGC | 1 cut(s) | 196 |
| MaeI | CTAG | 1 cut(s) | 170 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 2 cut(s) | 186, 197 |
| MboI | GATC | 2 cut(s) | 184, 195 |
| MfeI | CAATTG | 1 cut(s) | 31 |
| MluCI | AATT | 2 cut(s) | 22, 31 |
| MmeI | TCCRAC | 1 cut(s) | 91 |
| MnlI | CCTC | 1 cut(s) | 172 |
| MunI | CAATTG | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 179, 188 |
| NdeII | GATC | 2 cut(s) | 184, 195 |
| NlaIII | CATG | 4 cut(s) | 66, 156, 205, 258 |
| NspI | RCATGY | 1 cut(s) | 258 |
| PciI | ACATGT | 1 cut(s) | 254 |
| PfeI | GAWTC | 2 cut(s) | 52, 131 |
| PkrI | GCNGC | 1 cut(s) | 211 |
| PscI | ACATGT | 1 cut(s) | 254 |
| SatI | GCNGC | 1 cut(s) | 210 |
| Sau3AI | GATC | 2 cut(s) | 184, 195 |
| SetI | ASST | 3 cut(s) | 79, 175, 184 |
| SmlI | CTYRAG | 1 cut(s) | 177 |
| SmoI | CTYRAG | 1 cut(s) | 177 |
| Sse9I | AATT | 2 cut(s) | 22, 31 |
| SspMI | CTAG | 1 cut(s) | 170 |
| TaaI | ACNGT | 1 cut(s) | 109 |
| TasI | AATT | 2 cut(s) | 22, 31 |
| TfiI | GAWTC | 2 cut(s) | 52, 131 |
| TscAI | CASTG | 1 cut(s) | 112 |
| TseI | GCWGC | 1 cut(s) | 209 |
| TspRI | CASTG | 1 cut(s) | 112 |
| XapI | RAATTY | 1 cut(s) | 22 |
| XceI | RCATGY | 1 cut(s) | 258 |
| XspI | CTAG | 1 cut(s) | 170 |