ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g13113 |
| prunus_persica | Prupe.1G178200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0324001 |
| rosa_multiflora | Rmu_sc0000526.1_g000014 Rmu_sc0002381.1_g000026 Rmu_sc0004684.1_g000006 Rmu_sc0011141.1_g000002 |
| rosa_samantha | Rh1BG050000 Rh1DG065500 Rh2AG420500 Rh7DG114200 Rh7DG114400 Rh7DG149400 |
| rosa_wichuraiana | Rw1G005070 Rw6G001310 Rw7G009650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 74 |
| AgsI | TTSAA | 2 cut(s) | 122, 198 |
| AluBI | AGCT | 1 cut(s) | 235 |
| AluI | AGCT | 1 cut(s) | 235 |
| Alw26I | GTCTC | 1 cut(s) | 8 |
| ApoI | RAATTY | 1 cut(s) | 74 |
| AseI | ATTAAT | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 2 cut(s) | 71, 173 |
| BcoDI | GTCTC | 1 cut(s) | 8 |
| BfaI | CTAG | 2 cut(s) | 99, 242 |
| BmsI | GCATC | 2 cut(s) | 177, 209 |
| BpuEI | CTTGAG | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 5, 35 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 2 cut(s) | 168, 224 |
| BseMII | CTCAG | 2 cut(s) | 204, 258 |
| BseRI | GAGGAG | 1 cut(s) | 26 |
| BsmAI | GTCTC | 1 cut(s) | 8 |
| BsmI | GAATGC | 1 cut(s) | 117 |
| Bsp143I | GATC | 1 cut(s) | 61 |
| BspCNI | CTCAG | 2 cut(s) | 205, 259 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssMI | GATC | 1 cut(s) | 61 |
| BssT1I | CCWWGG | 1 cut(s) | 93 |
| BstDEI | CTNAG | 2 cut(s) | 213, 267 |
| BstF5I | GGATG | 2 cut(s) | 168, 224 |
| BstKTI | GATC | 1 cut(s) | 64 |
| BstMAI | GTCTC | 1 cut(s) | 8 |
| BstMBI | GATC | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 123 |
| BtsCI | GGATG | 2 cut(s) | 168, 224 |
| BtsIMutI | CAGTG | 1 cut(s) | 264 |
| CviAII | CATG | 2 cut(s) | 45, 83 |
| CviJI | RGCY | 3 cut(s) | 98, 179, 235 |
| CviKI_1 | RGCY | 3 cut(s) | 98, 179, 235 |
| DdeI | CTNAG | 2 cut(s) | 213, 267 |
| DpnI | GATC | 1 cut(s) | 63 |
| DpnII | GATC | 1 cut(s) | 61 |
| Eco130I | CCWWGG | 1 cut(s) | 93 |
| EcoT14I | CCWWGG | 1 cut(s) | 93 |
| ErhI | CCWWGG | 1 cut(s) | 93 |
| FaeI | CATG | 2 cut(s) | 48, 86 |
| FaiI | YATR | 5 cut(s) | 46, 84, 228, 230, 275 |
| FatI | CATG | 2 cut(s) | 44, 82 |
| FauNDI | CATATG | 1 cut(s) | 228 |
| FokI | GGATG | 2 cut(s) | 155, 231 |
| FspBI | CTAG | 2 cut(s) | 99, 242 |
| Hin1II | CATG | 2 cut(s) | 48, 86 |
| HinfI | GANTC | 4 cut(s) | 112, 144, 155, 250 |
| HphI | GGTGA | 2 cut(s) | 71, 173 |
| Hpy166II | GTNNAC | 1 cut(s) | 207 |
| Hpy188I | TCNGA | 2 cut(s) | 139, 214 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| Hpy8I | GTNNAC | 1 cut(s) | 207 |
| HpyCH4V | TGCA | 1 cut(s) | 222 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 123 |
| HpyF3I | CTNAG | 2 cut(s) | 213, 267 |
| Hsp92II | CATG | 2 cut(s) | 48, 86 |
| Kzo9I | GATC | 1 cut(s) | 61 |
| LmnI | GCTCC | 1 cut(s) | 232 |
| LpnPI | CCDG | 4 cut(s) | 133, 137, 144, 221 |
| LweI | GCATC | 2 cut(s) | 177, 209 |
| MaeI | CTAG | 2 cut(s) | 99, 242 |
| MaeIII | GTNAC | 1 cut(s) | 262 |
| MalI | GATC | 1 cut(s) | 63 |
| MboI | GATC | 1 cut(s) | 61 |
| MboII | GAAGA | 1 cut(s) | 121 |
| MluCI | AATT | 3 cut(s) | 74, 133, 277 |
| MlyI | GAGTC | 1 cut(s) | 153 |
| MseI | TTAA | 2 cut(s) | 50, 129 |
| Mva1269I | GAATGC | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 123 |
| NdeI | CATATG | 1 cut(s) | 228 |
| NdeII | GATC | 1 cut(s) | 61 |
| NlaIII | CATG | 2 cut(s) | 48, 86 |
| NmuCI | GTSAC | 1 cut(s) | 262 |
| PctI | GAATGC | 1 cut(s) | 117 |
| PfeI | GAWTC | 3 cut(s) | 112, 155, 250 |
| PleI | GAGTC | 1 cut(s) | 152 |
| PpsI | GAGTC | 1 cut(s) | 152 |
| PshBI | ATTAAT | 1 cut(s) | 129 |
| SaqAI | TTAA | 2 cut(s) | 50, 129 |
| Sau3AI | GATC | 1 cut(s) | 61 |
| SchI | GAGTC | 1 cut(s) | 153 |
| SetI | ASST | 2 cut(s) | 212, 237 |
| SfaNI | GCATC | 2 cut(s) | 177, 209 |
| SmlI | CTYRAG | 1 cut(s) | 8 |
| SmoI | CTYRAG | 1 cut(s) | 8 |
| Sse9I | AATT | 3 cut(s) | 74, 133, 277 |
| SspMI | CTAG | 2 cut(s) | 99, 242 |
| StyI | CCWWGG | 1 cut(s) | 93 |
| TasI | AATT | 3 cut(s) | 74, 133, 277 |
| TfiI | GAWTC | 3 cut(s) | 112, 155, 250 |
| Tru1I | TTAA | 2 cut(s) | 50, 129 |
| Tru9I | TTAA | 2 cut(s) | 50, 129 |
| TscAI | CASTG | 1 cut(s) | 271 |
| TseFI | GTSAC | 1 cut(s) | 262 |
| Tsp45I | GTSAC | 1 cut(s) | 262 |
| TspDTI | ATGAA | 2 cut(s) | 33, 71 |
| TspRI | CASTG | 1 cut(s) | 271 |
| VspI | ATTAAT | 1 cut(s) | 129 |
| XapI | RAATTY | 1 cut(s) | 74 |
| XbaI | TCTAGA | 1 cut(s) | 241 |
| XspI | CTAG | 2 cut(s) | 99, 242 |