ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g13113 |
| prunus_persica | Prupe.1G178200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0324001 |
| rosa_multiflora | Rmu_sc0000526.1_g000014 Rmu_sc0002381.1_g000026 Rmu_sc0004684.1_g000006 Rmu_sc0011141.1_g000002 |
| rosa_samantha | Rh1BG050000 Rh1DG065500 Rh2AG420500 Rh7DG114200 Rh7DG114400 Rh7DG149400 |
| rosa_wichuraiana | Rw1G005070 Rw6G001310 Rw7G009650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 160 |
| AciI | CCGC | 2 cut(s) | 158, 160 |
| AcoI | YGGCCR | 1 cut(s) | 148 |
| AcsI | RAATTY | 2 cut(s) | 34, 341 |
| AfaI | GTAC | 2 cut(s) | 225, 246 |
| AgsI | TTSAA | 5 cut(s) | 39, 52, 100, 259, 319 |
| AluBI | AGCT | 2 cut(s) | 119, 274 |
| AluI | AGCT | 2 cut(s) | 119, 274 |
| Alw26I | GTCTC | 1 cut(s) | 306 |
| AoxI | GGCC | 2 cut(s) | 148, 197 |
| ApoI | RAATTY | 2 cut(s) | 34, 341 |
| AsuHPI | GGTGA | 1 cut(s) | 263 |
| AsuII | TTCGAA | 1 cut(s) | 56 |
| BalI | TGGCCA | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 306 |
| BfaI | CTAG | 1 cut(s) | 212 |
| BmrI | ACTGGG | 1 cut(s) | 257 |
| BmsI | GCATC | 1 cut(s) | 432 |
| BmuI | ACTGGG | 1 cut(s) | 257 |
| Bpu14I | TTCGAA | 1 cut(s) | 56 |
| BpuEI | CTTGAG | 1 cut(s) | 296 |
| BsaI | GGTCTC | 1 cut(s) | 306 |
| BsaJI | CCNNGG | 1 cut(s) | 158 |
| Bse1I | ACTGG | 1 cut(s) | 252 |
| BseDI | CCNNGG | 1 cut(s) | 158 |
| BseGI | GGATG | 1 cut(s) | 447 |
| BseMII | CTCAG | 2 cut(s) | 104, 317 |
| BseNI | ACTGG | 1 cut(s) | 252 |
| BseRI | GAGGAG | 2 cut(s) | 32, 293 |
| Bsh1236I | CGCG | 1 cut(s) | 160 |
| BshFI | GGCC | 2 cut(s) | 150, 199 |
| BsmAI | GTCTC | 1 cut(s) | 306 |
| BsnI | GGCC | 2 cut(s) | 150, 199 |
| Bso31I | GGTCTC | 1 cut(s) | 306 |
| Bsp119I | TTCGAA | 1 cut(s) | 56 |
| BspACI | CCGC | 2 cut(s) | 158, 160 |
| BspANI | GGCC | 2 cut(s) | 150, 199 |
| BspCNI | CTCAG | 2 cut(s) | 105, 316 |
| BspFNI | CGCG | 1 cut(s) | 160 |
| BspT104I | TTCGAA | 1 cut(s) | 56 |
| BspTNI | GGTCTC | 1 cut(s) | 306 |
| BsrI | ACTGG | 1 cut(s) | 252 |
| BssECI | CCNNGG | 1 cut(s) | 158 |
| Bst4CI | ACNGT | 1 cut(s) | 353 |
| Bst6I | CTCTTC | 1 cut(s) | 227 |
| BstBI | TTCGAA | 1 cut(s) | 56 |
| BstDEI | CTNAG | 3 cut(s) | 113, 303, 450 |
| BstDSI | CCRYGG | 1 cut(s) | 158 |
| BstF5I | GGATG | 1 cut(s) | 447 |
| BstFNI | CGCG | 1 cut(s) | 160 |
| BstMAI | GTCTC | 1 cut(s) | 306 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 67, 89 |
| BstUI | CGCG | 1 cut(s) | 160 |
| BsuRI | GGCC | 2 cut(s) | 150, 199 |
| BtgI | CCRYGG | 1 cut(s) | 158 |
| BtsCI | GGATG | 1 cut(s) | 447 |
| Cfr42I | CCGCGG | 1 cut(s) | 161 |
| Csp6I | GTAC | 2 cut(s) | 224, 245 |
| CviJI | RGCY | 6 cut(s) | 83, 112, 119, 150, 199, 274 |
| CviKI_1 | RGCY | 6 cut(s) | 83, 112, 119, 150, 199, 274 |
| CviQI | GTAC | 2 cut(s) | 224, 245 |
| DdeI | CTNAG | 3 cut(s) | 113, 303, 450 |
| EaeI | YGGCCR | 1 cut(s) | 148 |
| Eam1104I | CTCTTC | 1 cut(s) | 227 |
| EarI | CTCTTC | 1 cut(s) | 227 |
| Eco31I | GGTCTC | 1 cut(s) | 306 |
| FaiI | YATR | 5 cut(s) | 153, 269, 289, 356, 385 |
| FspBI | CTAG | 1 cut(s) | 212 |
| HaeIII | GGCC | 2 cut(s) | 150, 199 |
| HinfI | GANTC | 2 cut(s) | 281, 421 |
| HphI | GGTGA | 1 cut(s) | 263 |
| Hpy188I | TCNGA | 2 cut(s) | 405, 426 |
| Hpy188III | TCNNGA | 3 cut(s) | 100, 212, 439 |
| HpyCH4III | ACNGT | 1 cut(s) | 353 |
| HpyCH4V | TGCA | 2 cut(s) | 178, 358 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 67, 89 |
| HpyF3I | CTNAG | 3 cut(s) | 113, 303, 450 |
| KspI | CCGCGG | 1 cut(s) | 161 |
| LmnI | GCTCC | 2 cut(s) | 89, 271 |
| LpnPI | CCDG | 8 cut(s) | 164, 205, 233, 247, 290, 373, 403, 424 |
| LweI | GCATC | 1 cut(s) | 432 |
| MaeI | CTAG | 1 cut(s) | 212 |
| MaeIII | GTNAC | 1 cut(s) | 332 |
| MboII | GAAGA | 4 cut(s) | 56, 175, 244, 383 |
| MlsI | TGGCCA | 1 cut(s) | 150 |
| MluCI | AATT | 5 cut(s) | 34, 52, 105, 341, 399 |
| MluNI | TGGCCA | 1 cut(s) | 150 |
| MlyI | GAGTC | 1 cut(s) | 290 |
| MmeI | TCCRAC | 1 cut(s) | 110 |
| MnlI | CCTC | 8 cut(s) | 10, 72, 117, 235, 271, 291, 316, 399 |
| Mox20I | TGGCCA | 1 cut(s) | 150 |
| MscI | TGGCCA | 1 cut(s) | 150 |
| Msp20I | TGGCCA | 1 cut(s) | 150 |
| MspA1I | CMGCKG | 1 cut(s) | 160 |
| MvnI | CGCG | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 67, 89 |
| NspV | TTCGAA | 1 cut(s) | 56 |
| PfeI | GAWTC | 1 cut(s) | 421 |
| PleI | GAGTC | 1 cut(s) | 289 |
| PpsI | GAGTC | 1 cut(s) | 289 |
| RsaI | GTAC | 2 cut(s) | 225, 246 |
| RsaNI | GTAC | 2 cut(s) | 224, 245 |
| SacII | CCGCGG | 1 cut(s) | 161 |
| SchI | GAGTC | 1 cut(s) | 290 |
| SetI | ASST | 6 cut(s) | 121, 246, 266, 276, 302, 309 |
| SfaNI | GCATC | 1 cut(s) | 432 |
| Sfr303I | CCGCGG | 1 cut(s) | 161 |
| SfuI | TTCGAA | 1 cut(s) | 56 |
| SgrBI | CCGCGG | 1 cut(s) | 161 |
| SmlI | CTYRAG | 1 cut(s) | 275 |
| SmoI | CTYRAG | 1 cut(s) | 275 |
| Sse9I | AATT | 5 cut(s) | 34, 52, 105, 341, 399 |
| SsiI | CCGC | 2 cut(s) | 158, 160 |
| SspI | AATATT | 1 cut(s) | 145 |
| SspMI | CTAG | 1 cut(s) | 212 |
| TaaI | ACNGT | 1 cut(s) | 353 |
| TaqI | TCGA | 1 cut(s) | 56 |
| TasI | AATT | 5 cut(s) | 34, 52, 105, 341, 399 |
| TfiI | GAWTC | 1 cut(s) | 421 |
| XapI | RAATTY | 2 cut(s) | 34, 341 |
| XbaI | TCTAGA | 1 cut(s) | 211 |
| XspI | CTAG | 1 cut(s) | 212 |