Rh2AG589500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
82057961 .. 82066257
8297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG589500.1

Sequence Viewer

Length: 459 bp
ATGGATGAAGGTGGTGAAGCGGAGTCAAAAGTAGGGGAGGTAATGGAAGGAGTGGCTTCAATAGCATTGCTACCATGTGGGTCTATATCAGGCCATTTCATCACAGTGAATGATTCCACTAACATTTGCTATGGTCTTCATGGAACTGAGTTGGCTTGTGAAAAGGAGTGTAGCAGGGGAGAAGATTATCGTCTGATCAAGCTTGCAATCATAGACTACAATAAAAAGAAGGAGAAAGTTGTTGTTGTGGAGTGTAGAGGCCATGATGCTGCGAGGTTAAGTAGCGTTGATCATGCTCATGGTTGGGAGAAGGATGTCGTAGATATGGTTGATGAACAGCATGGGAAGGATAAGATTGTGGTTTCGTTCAACTGTGAGACACTGAAATCTGACAAAGCAGCAGAAGATCATATCAGCAAGTTTTTGCCCAAACTAGCTGGCCTAGATGCTGTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

152

Amino Acids

16.54

Weight (kDa)

5.1

Isoelectric Point (pI)

20.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 20
AgsI TTSAA 2 cut(s) 60, 370
AluBI AGCT 2 cut(s) 202, 437
AluI AGCT 2 cut(s) 202, 437
Alw26I GTCTC 1 cut(s) 371
AoxI GGCC 3 cut(s) 91, 259, 439
ApeKI GCWGC 2 cut(s) 269, 398
AsuHPI GGTGA 1 cut(s) 26
BbsI GAAGAC 1 cut(s) 128
BbvI GCAGC 2 cut(s) 256, 410
BclI TGATCA 2 cut(s) 195, 289
BcoDI GTCTC 1 cut(s) 371
BfaI CTAG 2 cut(s) 434, 443
BisI GCNGC 2 cut(s) 270, 399
BlsI GCNGC 2 cut(s) 271, 400
BmsI GCATC 2 cut(s) 256, 436
BpiI GAAGAC 1 cut(s) 128
Bse3DI GCAATG 1 cut(s) 65
BseGI GGATG 2 cut(s) 10, 319
BseMI GCAATG 1 cut(s) 65
BseMII CTCAG 1 cut(s) 138
BseXI GCAGC 2 cut(s) 256, 410
BshFI GGCC 3 cut(s) 93, 261, 441
BsmAI GTCTC 1 cut(s) 371
BsnI GGCC 3 cut(s) 93, 261, 441
Bsp143I GATC 3 cut(s) 195, 289, 406
BspACI CCGC 1 cut(s) 20
BspANI GGCC 3 cut(s) 93, 261, 441
BspCNI CTCAG 1 cut(s) 139
BsrDI GCAATG 1 cut(s) 65
BssMI GATC 3 cut(s) 195, 289, 406
Bst4CI ACNGT 2 cut(s) 106, 374
BstC8I GCNNGC 2 cut(s) 204, 439
BstDEI CTNAG 1 cut(s) 147
BstF5I GGATG 2 cut(s) 10, 319
BstKTI GATC 3 cut(s) 198, 292, 409
BstMAI GTCTC 1 cut(s) 371
BstMBI GATC 3 cut(s) 195, 289, 406
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstV1I GCAGC 2 cut(s) 256, 410
BstV2I GAAGAC 1 cut(s) 128
BsuRI GGCC 3 cut(s) 93, 261, 441
BtsCI GGATG 2 cut(s) 10, 319
BtsIMutI CAGTG 2 cut(s) 111, 380
Cac8I GCNNGC 2 cut(s) 204, 439
CviAII CATG 6 cut(s) 75, 140, 263, 293, 299, 341
CviJI RGCY 7 cut(s) 56, 93, 155, 202, 261, 437, 441
CviKI_1 RGCY 7 cut(s) 56, 93, 155, 202, 261, 437, 441
DdeI CTNAG 1 cut(s) 147
DpnI GATC 3 cut(s) 197, 291, 408
DpnII GATC 3 cut(s) 195, 289, 406
FaeI CATG 6 cut(s) 78, 143, 266, 296, 302, 344
FatI CATG 6 cut(s) 74, 139, 262, 292, 298, 340
FbaI TGATCA 2 cut(s) 195, 289
Fnu4HI GCNGC 2 cut(s) 270, 399
FokI GGATG 2 cut(s) 17, 326
Fsp4HI GCNGC 2 cut(s) 270, 399
FspBI CTAG 2 cut(s) 434, 443
GluI GCNGC 2 cut(s) 270, 399
HaeIII GGCC 3 cut(s) 93, 261, 441
Hin1II CATG 6 cut(s) 78, 143, 266, 296, 302, 344
HindIII AAGCTT 1 cut(s) 200
HinfI GANTC 2 cut(s) 23, 113
HphI GGTGA 1 cut(s) 26
Hpy188I TCNGA 2 cut(s) 195, 391
HpyAV CCTTC 4 cut(s) 41, 223, 304, 340
HpyCH4III ACNGT 2 cut(s) 106, 374
HpyCH4V TGCA 1 cut(s) 206
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpyF3I CTNAG 1 cut(s) 147
Hsp92II CATG 6 cut(s) 78, 143, 266, 296, 302, 344
Ksp22I TGATCA 2 cut(s) 195, 289
Kzo9I GATC 3 cut(s) 195, 289, 406
LpnPI CCDG 3 cut(s) 75, 160, 423
Lsp1109I GCAGC 2 cut(s) 256, 410
LweI GCATC 2 cut(s) 256, 436
MaeI CTAG 2 cut(s) 434, 443
MalI GATC 3 cut(s) 197, 291, 408
MboI GATC 3 cut(s) 195, 289, 406
MboII GAAGA 3 cut(s) 128, 194, 416
MlyI GAGTC 1 cut(s) 32
MnlI CCTC 3 cut(s) 31, 251, 267
MseI TTAA 1 cut(s) 278
MslI CAYNNNNRTG 2 cut(s) 104, 297
MwoI GCNNNNNNNGC 1 cut(s) 62
NdeII GATC 3 cut(s) 195, 289, 406
NlaIII CATG 6 cut(s) 78, 143, 266, 296, 302, 344
PfeI GAWTC 1 cut(s) 113
PkrI GCNGC 2 cut(s) 271, 400
PleI GAGTC 1 cut(s) 31
PpsI GAGTC 1 cut(s) 31
RseI CAYNNNNRTG 2 cut(s) 104, 297
SaqAI TTAA 1 cut(s) 278
SatI GCNGC 2 cut(s) 270, 399
Sau3AI GATC 3 cut(s) 195, 289, 406
SchI GAGTC 1 cut(s) 32
SetI ASST 5 cut(s) 13, 42, 204, 278, 439
SfaNI GCATC 2 cut(s) 256, 436
SmiMI CAYNNNNRTG 2 cut(s) 104, 297
SsiI CCGC 1 cut(s) 20
SspMI CTAG 2 cut(s) 434, 443
TaaI ACNGT 2 cut(s) 106, 374
TfiI GAWTC 1 cut(s) 113
Tru1I TTAA 1 cut(s) 278
Tru9I TTAA 1 cut(s) 278
TscAI CASTG 2 cut(s) 111, 387
TseI GCWGC 2 cut(s) 269, 398
TspDTI ATGAA 4 cut(s) 21, 88, 128, 348
TspRI CASTG 2 cut(s) 111, 387
XspI CTAG 2 cut(s) 434, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.