Rh2BG363800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
50388022 .. 50388333
312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG363800.1

Sequence Viewer

Length: 312 bp
ATGAAACAGTGTGCTGACGGTTTTACCCTTCTGTGTATTAAGGAATTGCACAGCCCACCTGTACGATTTATGTGCCGCCGTGTTTTCGTCTTCCGCGTGTCTTATGCTCTTCGATCTCTCCACCGAACAACCGCTTGGGGGAGAGACAGGAGATCAGACAATGCTGCAAAGAAAGTTCAAGATAGAGAGAAGAGTGATAATAGAAGAAGCAAATCAAATGGGCAATTCGTGCAGCGTAGTTTGCTAAGGACACCATCATTGCCACCGTGTTTAGGGATGCCACACCTCAGCTCTATTTGCCCAAAGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.89

Weight (kDa)

10.64

Isoelectric Point (pI)

68.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 96
AciI CCGC 3 cut(s) 76, 94, 132
AfaI GTAC 1 cut(s) 63
AfiI CCNNNNNNNGG 2 cut(s) 138, 272
AgsI TTSAA 1 cut(s) 179
AjuI GAANNNNNNNTTGG 2 cut(s) 118, 150
AluBI AGCT 1 cut(s) 291
AluI AGCT 1 cut(s) 291
Alw26I GTCTC 1 cut(s) 138
ApeKI GCWGC 2 cut(s) 164, 232
BbsI GAAGAC 1 cut(s) 82
BbvCI CCTCAGC 1 cut(s) 287
BbvI GCAGC 2 cut(s) 151, 244
BccI CCATC 1 cut(s) 262
BceAI ACGGC 1 cut(s) 63
BcgI CGANNNNNNTGC 2 cut(s) 54, 88
BcoDI GTCTC 1 cut(s) 138
BisI GCNGC 3 cut(s) 76, 165, 233
BlsI GCNGC 3 cut(s) 77, 166, 234
BmsI GCATC 1 cut(s) 267
BpiI GAAGAC 1 cut(s) 82
Bpu10I CCTNAGC 2 cut(s) 245, 287
Bsc4I CCNNNNNNNGG 2 cut(s) 138, 272
Bse3DI GCAATG 1 cut(s) 257
BseGI GGATG 1 cut(s) 282
BseLI CCNNNNNNNGG 2 cut(s) 138, 272
BseMI GCAATG 1 cut(s) 257
BseMII CTCAG 1 cut(s) 301
BseXI GCAGC 2 cut(s) 151, 244
BsgI GTGCAG 1 cut(s) 251
Bsh1236I CGCG 1 cut(s) 96
BslI CCNNNNNNNGG 2 cut(s) 138, 272
BsmAI GTCTC 1 cut(s) 138
Bsp143I GATC 2 cut(s) 113, 152
BspACI CCGC 3 cut(s) 76, 94, 132
BspCNI CTCAG 1 cut(s) 300
BspFNI CGCG 1 cut(s) 96
BspQI GCTCTTC 1 cut(s) 114
BsrDI GCAATG 1 cut(s) 257
BssMI GATC 2 cut(s) 113, 152
Bst4CI ACNGT 3 cut(s) 9, 20, 267
Bst6I CTCTTC 2 cut(s) 114, 185
BstAPI GCANNNNNTGC 1 cut(s) 229
BstDEI CTNAG 2 cut(s) 245, 287
BstF5I GGATG 1 cut(s) 282
BstFNI CGCG 1 cut(s) 96
BstKTI GATC 2 cut(s) 116, 155
BstMAI GTCTC 1 cut(s) 138
BstMBI GATC 2 cut(s) 113, 152
BstMWI GCNNNNNNNGC 3 cut(s) 229, 241, 297
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 2 cut(s) 151, 244
BstV2I GAAGAC 1 cut(s) 82
BtsCI GGATG 1 cut(s) 282
BtsIMutI CAGTG 1 cut(s) 14
Csp6I GTAC 1 cut(s) 62
CviJI RGCY 2 cut(s) 54, 291
CviKI_1 RGCY 2 cut(s) 54, 291
CviQI GTAC 1 cut(s) 62
DdeI CTNAG 2 cut(s) 245, 287
DpnI GATC 2 cut(s) 115, 154
DpnII GATC 2 cut(s) 113, 152
Eam1104I CTCTTC 2 cut(s) 114, 185
EarI CTCTTC 2 cut(s) 114, 185
FaiI YATR 2 cut(s) 71, 105
Fnu4HI GCNGC 3 cut(s) 76, 165, 233
FokI GGATG 1 cut(s) 289
Fsp4HI GCNGC 3 cut(s) 76, 165, 233
GluI GCNGC 3 cut(s) 76, 165, 233
Hpy188I TCNGA 1 cut(s) 157
Hpy188III TCNNGA 1 cut(s) 179
HpyAV CCTTC 1 cut(s) 38
HpyCH4III ACNGT 3 cut(s) 9, 20, 267
HpyCH4V TGCA 3 cut(s) 49, 167, 232
HpyF10VI GCNNNNNNNGC 3 cut(s) 229, 241, 297
HpyF3I CTNAG 2 cut(s) 245, 287
Kzo9I GATC 2 cut(s) 113, 152
LguI GCTCTTC 1 cut(s) 114
LpnPI CCDG 2 cut(s) 72, 133
Lsp1109I GCAGC 2 cut(s) 151, 244
LweI GCATC 1 cut(s) 267
MalI GATC 2 cut(s) 115, 154
MboI GATC 2 cut(s) 113, 152
MboII GAAGA 4 cut(s) 82, 101, 202, 216
MluCI AATT 2 cut(s) 44, 224
MnlI CCTC 1 cut(s) 296
MseI TTAA 1 cut(s) 39
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 3 cut(s) 229, 241, 297
NdeII GATC 2 cut(s) 113, 152
PciSI GCTCTTC 1 cut(s) 114
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PkrI GCNGC 3 cut(s) 77, 166, 234
RsaI GTAC 1 cut(s) 63
RsaNI GTAC 1 cut(s) 62
SapI GCTCTTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 39
SatI GCNGC 3 cut(s) 76, 165, 233
Sau3AI GATC 2 cut(s) 113, 152
SetI ASST 3 cut(s) 61, 288, 293
SfaNI GCATC 1 cut(s) 267
SgeI CNNG 9 cut(s) 71, 92, 107, 109, 147, 160, 191, 241, 279
Sse9I AATT 2 cut(s) 44, 224
SsiI CCGC 3 cut(s) 76, 94, 132
TaaI ACNGT 3 cut(s) 9, 20, 267
TaqI TCGA 1 cut(s) 112
TasI AATT 2 cut(s) 44, 224
TauI GCSGC 1 cut(s) 78
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
TscAI CASTG 1 cut(s) 14
TseI GCWGC 2 cut(s) 164, 232
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.