Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0007750

Physical Location & Seq

Genomic Coordinates Reverse (-)

48443359 .. 48445593

Gene Structure 2235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG357900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGTCATTTTCGCTTGCCTCCAAATGGCTCCACTCTTTAACTTTCATGAAAATGGTCTCTGTGGCAGCTTCGGCTCCAACCCACTTGGGTACACATACCCAGTTTCATTCTTTAGAAAACCCGCCAATTATACTCTTTGAAAATTGCAAATCCATGGACCAACTGAAGCAAATGCATGCTCAAACCATTAAAACAGGTTTCGCATCGGACCCGGCCGCGCTCAACAGGATCATAGTCTTCTGTTGTACCCATGAATTGGGTGACATGAAGTATGCACGCCAGGTGTTTGATAGAATTCCTGAACCAAGTGTTTTCATTTGTAACACCATGATGAAAGGCTATAGTAGGATACATTGCCCCCGTTATGGGGTATCTATGTATTCAGCAATGCAGAGGATGGGTGTGAAGCCCGATTGCTATACATTTCCGTTCTTGTTGAGGGGATTTTCTCCTGAGATTGCATTGGAATGGGGGAGAGGGTTCCATGCTCATGTGTTGAAGTATGGTTTCGATTCTAATGTTTTCGTTCACAATGCATTGGTGCAGATGTACTCATTTTGTGGTCAAGTTGATACGGCACGTGTGGTTTTTGACATGGTCAGTGAGAAGGATGTTGCTACTTGGAATGCAATGATCTCTGGGTACAATAAGATCAAGAAGTTCGATGAGTCCTGGAAGCTTTTCCATGACATGGAGAAGAAGGGAGTGTTTCCCACTTCTGTTACCCTTGTCTCAGTACTTTCAGCTTGCTCCAAATTGAAGGATTTAGATGCTGGGAAGCAGGTTCACAACTACGTCAAGGAGTGTGTGGTCGAACCTAATCTAGTTTTGGACAATGCTTTGATTGACATGTATGCTGCTTGTGGGAAGATGGATGTTGCACTCGAGATTTTTGAGAATATGAAAAGGAGGGATGTAATTTCTTGGACTACCATTGTTAAGGGGTTTTGCAATCCAGGACAAGTTGATTTAGCTCGAAACTACTTTGATCAGATGCCAGACAGAGACTATATTTCATGGACCGCAATAATTGATGGGTATGTAAAGGTGAACCGGTTCAAAGAGGTTTTGGAACTCTTCCGTGAGATGCAGAGTTCAAATATAAAACCAGATGAGTATACCATGGTAAGCATTCTAACAGCTTGTGCACATCTTGGAGCACTAGAACTCGGAGAATGGATAAGAACTTACATTGACAAAAACAAGATCAAGAATGACACGTTTGTGCGAAATGCTTTAATAGACATGTATTTCAAGTGTGGAAATGTTGAAAAAGCTGTGAGGGTATTCAATGAAATGCTTCAAAGGGACAAATTTACCTGGACAGCTATGATTGTTGGCCTTGCTATTAATGGACACGGTAAGGAATCTCTTGACATGTTCAGTCAAATGCTGAAATCTGCAGTAGCTCCGGACAAGATAACATACCTGGGTGTTCTTTGTGCGTGTACTCACTCTGGCATGGTCGATGAAGGTAGAAAGTTTTTCTCTAGTATGATCACCCTACATGGGATTGAGCCTACTGTTGAGCATTACGGGTGCATGGTGGATCTTCTTGGTCGAGCAGGGCGTCTTAAAGAAGCTTATGAGGTTATTCAGAACATGCCAATAGAACCAAACTCAGTTGTATGGGGAACTCTTCTCGGTGCTTGTAGAATGCATAAAGATGCAGAACTGGCTGAAGTGGTGGCAAAACAGATACTAGATTTGGATCCTGAAAACAGCGCTGTTTATGTTCTCTTATGCAATATATATGCAGCTTGCAACAAATGGGAAAGTTTCCGCGAGGTAAGGCAAACGATTATGGATAGGGGGATCAAGAAGACTCCTGGTTGTAGTTTGATAGAGGTGAATGGTGATGTTCATGAGTTTGTAGCCGGGGATGGCTCACATCCTCAATCCGAAAAGATATATTCCAAGTTGGATGAGATGATTAAAGACTTGAAATCTGCAGGGTATTCACCTGATACGTCCGAGGTTTTTCTTGATGTAGGGGAAGAGAATAAAGAGAGTGCAGTTTATAAGCACAGTGAGAAGTTAGCAATTGCGTTTGGATTGATTAGTTTAGGACCTGGGGTGACTATTAGAGTCATGAAGAACCTCAGAATCTGCGTGGATTGTCACAGCATGGCAAAGCTGGTTTCCAAGGTGTGTGATAGAGAAGTGATTGTTAGGGATGGAACTCGGTTCCACCATTTCAGACATGGCTCATGTTCATGTAAAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

744

Amino Acids

84.16

Weight (kDa)

6.8

Isoelectric Point (pI)

31.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	102 - 149	1e-08	PPR repeat family
PPR_2	PF13041	203 - 252	2.2e-13	PPR repeat family
PPR	PF01535	207 - 236	1.5e-07	PPR repeat
PPR_3	PF13812	226 - 285	6.5e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	336 - 384	3.7e-13	PPR repeat family
PPR	PF01535	338 - 368	2.2e-07	PPR repeat
PPR_2	PF13041	406 - 436	2e-06	PPR repeat family
PPR	PF01535	411 - 436	3.7e-06	PPR repeat
PPR_2	PF13041	437 - 483	8.7e-08	PPR repeat family
E_motif	PF20431	554 - 616	1.2e-15	E motif
Eplus_motif	PF20430	621 - 646	1.1e-07	E+ motif
DYW_deaminase	PF14432	652 - 744	4.9e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15930
fragaria_vesca	FvH4_3g42650
malus_domestica	MD03G1030100.v1.1 MD11G1035200.v1.1 MD17G1214200.v1.1
prunus_persica	Prupe.3G090100_v2.0.a1 Prupe.6G026400_v2.0.a1
pyrus_communis	pycom17g21890
rosa_chinensis	RchiOBHm_Chr2g0134941 RchiOBHm_Chr5g0076281 RchiOBHm_Chr5g0076601 RchiOBHm_Chr5g0076611
rosa_laevigata	RLG00000019432 RLG00000036613
rosa_multiflora	Rmu_sc0001385.1_g000005 Rmu_sc0007475.1_g000006
rosa_roxburghii	Rroxscaffold_1G00005580
rosa_rugosa	Rorug02G0321400 Rorug05G0446800
rosa_samantha	Rh2CG357900 Rh5AG501800 Rh5BG523600 Rh5CG547300
rosa_wichuraiana	Rw2G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2022
Acc36I	ACCTGC	1 cut(s)	772
AccB7I	CCANNNNNTGG	2 cut(s)	256, 691
AccI	GTMKAC	1 cut(s)	1118
AccII	CGCG	2 cut(s)	218, 1785
AccIII	TCCGGA	1 cut(s)	1411
AciI	CCGC	4 cut(s)	122, 216, 1023, 1783
AclWI	GGATC	5 cut(s)	236, 1557, 1706, 1719, 1823
AcoI	YGGCCR	1 cut(s)	213
AcsI	RAATTY	2 cut(s)	294, 1313
AcuI	CTGAAG	2 cut(s)	185, 1701
AcvI	CACGTG	1 cut(s)	581
AcyI	GRCGYC	1 cut(s)	1570
AfaI	GTAC	6 cut(s)	91, 247, 551, 644, 738, 1450
AfeI	AGCGCT	1 cut(s)	1726
AfiI	CCNNNNNNNGG	7 cut(s)	24, 256, 365, 366, 367, 691, 1509
AflIII	ACRYGT	5 cut(s)	580, 849, 1218, 1245, 1377
AgeI	ACCGGT	1 cut(s)	1053
AjnI	CCWGG	7 cut(s)	279, 671, 955, 1319, 1428, 1828, 2071
AleI	CACNNNNGTG	1 cut(s)	1223
Alw21I	GWGCWC	2 cut(s)	1150, 1162
Alw26I	GTCTC	3 cut(s)	61, 736, 999
Alw44I	GTGCAC	1 cut(s)	1146
AlwI	GGATC	5 cut(s)	236, 1557, 1706, 1719, 1823
AlwNI	CAGNNNCTG	1 cut(s)	2109
Ama87I	CYCGRG	1 cut(s)	884
Aor13HI	TCCGGA	1 cut(s)	1411
Aor51HI	AGCGCT	1 cut(s)	1726
AoxI	GGCC	2 cut(s)	213, 1339
ApaLI	GTGCAC	1 cut(s)	1146
ApeKI	GCWGC	3 cut(s)	65, 857, 1757
ApoI	RAATTY	2 cut(s)	294, 1313
AseI	ATTAAT	1 cut(s)	1350
AsiGI	ACCGGT	1 cut(s)	1053
Asp700I	GAANNNNTTC	3 cut(s)	680, 1055, 1299
AspLEI	GCGC	2 cut(s)	220, 1727
AspS9I	GGNCC	4 cut(s)	157, 208, 1020, 2069
AsuC2I	CCSGG	2 cut(s)	212, 1879
AsuHPI	GGTGA	7 cut(s)	272, 1060, 1492, 1861, 1868, 1953, 2089
AvaI	CYCGRG	1 cut(s)	884
AvaII	GGWCC	4 cut(s)	157, 208, 1020, 2069
BaeGI	GKGCMC	1 cut(s)	1150
BamHI	GGATCC	1 cut(s)	1711
BbrPI	CACGTG	1 cut(s)	581
BbsI	GAAGAC	2 cut(s)	229, 1829
Bbv12I	GWGCWC	2 cut(s)	1150, 1162
BbvI	GCAGC	3 cut(s)	77, 844, 1769
BccI	CCATC	5 cut(s)	391, 865, 1028, 1877, 2171
BceAI	ACGGC	1 cut(s)	591
BciT130I	CCWGG	7 cut(s)	281, 673, 957, 1321, 1430, 1830, 2073
BciVI	GTATCC	1 cut(s)	342
BclI	TGATCA	2 cut(s)	988, 1497
BcnI	CCSGG	2 cut(s)	212, 1879
BcoDI	GTCTC	3 cut(s)	61, 736, 999
BfaI	CTAG	4 cut(s)	824, 1163, 1491, 1703
BfmI	CTRYAG	3 cut(s)	340, 1401, 1950
BfoI	RGCGCY	1 cut(s)	1728
BfuAI	ACCTGC	1 cut(s)	772
BfuI	GTATCC	1 cut(s)	342
BisI	GCNGC	4 cut(s)	66, 216, 858, 1758
BlsI	GCNGC	4 cut(s)	67, 217, 859, 1759
BmcAI	AGTACT	1 cut(s)	738
Bme1390I	CCNGG	9 cut(s)	212, 281, 673, 957, 1321, 1430, 1830, 1879, 2073
Bme18I	GGWCC	4 cut(s)	157, 208, 1020, 2069
BmeT110I	CYCGRG	1 cut(s)	884
BmgT120I	GGNCC	4 cut(s)	157, 208, 1020, 2069
BmiI	GGNNCC	6 cut(s)	29, 75, 210, 482, 1713, 2189
BmrFI	CCNGG	9 cut(s)	212, 281, 673, 957, 1321, 1430, 1830, 1879, 2073
BmrI	ACTGGG	1 cut(s)	94
BmsI	GCATC	5 cut(s)	212, 760, 984, 1077, 1657
BmuI	ACTGGG	1 cut(s)	94
BpiI	GAAGAC	2 cut(s)	229, 1829
BpuMI	CCSGG	2 cut(s)	212, 1879
BsaAI	YACGTR	1 cut(s)	581
BsaBI	GATNNNNATC	1 cut(s)	1710
BsaHI	GRCGYC	1 cut(s)	1570
BsaI	GGTCTC	1 cut(s)	61
BsaJI	CCNNGG	7 cut(s)	153, 1122, 1429, 1878, 1974, 2072, 2145
BsaWI	WCCGGW	2 cut(s)	1053, 1411
Bsc4I	CCNNNNNNNGG	7 cut(s)	24, 256, 365, 366, 367, 691, 1509
Bse118I	RCCGGY	1 cut(s)	1053
Bse1I	ACTGG	2 cut(s)	100, 1680
Bse3DI	GCAATG	3 cut(s)	352, 393, 636
Bse8I	GATNNNNATC	1 cut(s)	1710
BseAI	TCCGGA	1 cut(s)	1411
BseBI	CCWGG	7 cut(s)	281, 673, 957, 1321, 1430, 1830, 2073
BseDI	CCNNGG	7 cut(s)	153, 1122, 1429, 1878, 1974, 2072, 2145
BseGI	GGATG	8 cut(s)	402, 616, 880, 919, 1888, 1891, 1930, 2182
BseJI	GATNNNNATC	1 cut(s)	1710
BseLI	CCNNNNNNNGG	7 cut(s)	24, 256, 365, 366, 367, 691, 1509
BseMI	GCAATG	3 cut(s)	352, 393, 636
BseMII	CTCAG	4 cut(s)	444, 747, 1635, 2116
BseNI	ACTGG	2 cut(s)	100, 1680
BseSI	GKGCMC	1 cut(s)	1150
BseX3I	CGGCCG	1 cut(s)	213
BseXI	GCAGC	3 cut(s)	77, 844, 1769
BseYI	CCCAGC	1 cut(s)	773
BsgI	GTGCAG	2 cut(s)	563, 2034
Bsh1236I	CGCG	2 cut(s)	218, 1785
Bsh1285I	CGRYCG	1 cut(s)	216
BshFI	GGCC	2 cut(s)	215, 1341
BshTI	ACCGGT	1 cut(s)	1053
BsiEI	CGRYCG	1 cut(s)	216
BsiHKAI	GWGCWC	2 cut(s)	1150, 1162
BsiHKCI	CYCGRG	1 cut(s)	884
BsiSI	CCGG	4 cut(s)	212, 1054, 1412, 1878
BslFI	GGGAC	1 cut(s)	1322
BslI	CCNNNNNNNGG	7 cut(s)	24, 256, 365, 366, 367, 691, 1509
BsmAI	GTCTC	3 cut(s)	61, 736, 999
BsmFI	GGGAC	1 cut(s)	1322
BsmI	GAATGC	3 cut(s)	631, 1131, 1662
BsnI	GGCC	2 cut(s)	215, 1341
Bso31I	GGTCTC	1 cut(s)	61
BsoBI	CYCGRG	1 cut(s)	884
Bsp1286I	GDGCHC	2 cut(s)	1150, 1162
Bsp13I	TCCGGA	1 cut(s)	1411
Bsp143I	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
Bsp19I	CCATGG	2 cut(s)	153, 1122
BspACI	CCGC	4 cut(s)	122, 216, 1023, 1783
BspANI	GGCC	2 cut(s)	215, 1341
BspCNI	CTCAG	4 cut(s)	445, 746, 1634, 2115
BspEI	TCCGGA	1 cut(s)	1411
BspFNI	CGCG	2 cut(s)	218, 1785
BspHI	TCATGA	3 cut(s)	45, 1864, 2091
BspLI	GGNNCC	6 cut(s)	29, 75, 210, 482, 1713, 2189
BspMAI	CTGCAG	2 cut(s)	1405, 1954
BspMI	ACCTGC	1 cut(s)	772
BspPI	GGATC	5 cut(s)	236, 1557, 1706, 1719, 1823
BspTNI	GGTCTC	1 cut(s)	61
BsrDI	GCAATG	3 cut(s)	352, 393, 636
BsrFI	RCCGGY	1 cut(s)	1053
BsrI	ACTGG	2 cut(s)	100, 1680
BssAI	RCCGGY	1 cut(s)	1053
BssECI	CCNNGG	7 cut(s)	153, 1122, 1429, 1878, 1974, 2072, 2145
BssMI	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
BssNAI	GTATAC	1 cut(s)	1119
BssNI	GRCGYC	1 cut(s)	1570
BssT1I	CCWWGG	3 cut(s)	153, 1122, 2145
Bst1107I	GTATAC	1 cut(s)	1119
Bst2UI	CCWGG	7 cut(s)	281, 673, 957, 1321, 1430, 1830, 2073
Bst4CI	ACNGT	3 cut(s)	1361, 1525, 2030
Bst6I	CTCTTC	3 cut(s)	1082, 1644, 1992
BstACI	GRCGYC	1 cut(s)	1570
BstBAI	YACGTR	1 cut(s)	581
BstC8I	GCNNGC	5 cut(s)	15, 177, 277, 748, 1762
BstDEI	CTNAG	4 cut(s)	453, 733, 1621, 2102
BstDSI	CCRYGG	2 cut(s)	153, 1122
BstF5I	GGATG	8 cut(s)	402, 616, 880, 919, 1888, 1891, 1930, 2182
BstFNI	CGCG	2 cut(s)	218, 1785
BstH2I	RGCGCY	1 cut(s)	1728
BstHHI	GCGC	2 cut(s)	220, 1727
BstKTI	GATC	9 cut(s)	231, 636, 654, 991, 1209, 1500, 1552, 1714, 1818
BstMAI	GTCTC	3 cut(s)	61, 736, 999
BstMBI	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
BstMCI	CGRYCG	1 cut(s)	216
BstMWI	GCNNNNNNNGC	2 cut(s)	71, 1676
BstNI	CCWGG	7 cut(s)	281, 673, 957, 1321, 1430, 1830, 2073
BstNSI	RCATGY	5 cut(s)	179, 853, 1249, 1381, 1606
BstSCI	CCNGG	9 cut(s)	210, 279, 671, 955, 1319, 1428, 1828, 1877, 2071
BstSFI	CTRYAG	3 cut(s)	340, 1401, 1950
BstSLI	GKGCMC	1 cut(s)	1150
BstUI	CGCG	2 cut(s)	218, 1785
BstV1I	GCAGC	3 cut(s)	77, 844, 1769
BstV2I	GAAGAC	2 cut(s)	229, 1829
BstX2I	RGATCY	2 cut(s)	1549, 1711
BstYI	RGATCY	2 cut(s)	1549, 1711
BstZ17I	GTATAC	1 cut(s)	1119
BstZI	CGGCCG	1 cut(s)	213
BsuI	GTATCC	1 cut(s)	342
BsuRI	GGCC	2 cut(s)	215, 1341
BtgI	CCRYGG	2 cut(s)	153, 1122
BtsCI	GGATG	8 cut(s)	402, 616, 880, 919, 1888, 1891, 1930, 2182
BtsIMutI	CAGTG	2 cut(s)	607, 2035
BveI	ACCTGC	1 cut(s)	772
Cac8I	GCNNGC	5 cut(s)	15, 177, 277, 748, 1762
CaiI	CAGNNNCTG	1 cut(s)	2109
CciI	TCATGA	3 cut(s)	45, 1864, 2091
CfoI	GCGC	2 cut(s)	220, 1727
Cfr10I	RCCGGY	1 cut(s)	1053
Cfr13I	GGNCC	4 cut(s)	157, 208, 1020, 2069
CseI	GACGC	1 cut(s)	1559
Csp6I	GTAC	6 cut(s)	90, 246, 550, 643, 737, 1449
CspAI	ACCGGT	1 cut(s)	1053
CviQI	GTAC	6 cut(s)	90, 246, 550, 643, 737, 1449
DdeI	CTNAG	4 cut(s)	453, 733, 1621, 2102
DpnI	GATC	9 cut(s)	230, 635, 653, 990, 1208, 1499, 1551, 1713, 1817
DpnII	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
EaeI	YGGCCR	1 cut(s)	213
EagI	CGGCCG	1 cut(s)	213
Eam1104I	CTCTTC	3 cut(s)	1082, 1644, 1992
EarI	CTCTTC	3 cut(s)	1082, 1644, 1992
EclXI	CGGCCG	1 cut(s)	213
Eco130I	CCWWGG	3 cut(s)	153, 1122, 2145
Eco31I	GGTCTC	1 cut(s)	61
Eco47I	GGWCC	4 cut(s)	157, 208, 1020, 2069
Eco47III	AGCGCT	1 cut(s)	1726
Eco52I	CGGCCG	1 cut(s)	213
Eco57I	CTGAAG	2 cut(s)	185, 1701
Eco72I	CACGTG	1 cut(s)	581
Eco88I	CYCGRG	1 cut(s)	884
EcoO109I	RGGNCCY	1 cut(s)	2069
EcoRI	GAATTC	1 cut(s)	294
EcoRII	CCWGG	7 cut(s)	279, 671, 955, 1319, 1428, 1828, 2071
EcoT14I	CCWWGG	3 cut(s)	153, 1122, 2145
EcoT22I	ATGCAT	3 cut(s)	177, 538, 1662
ErhI	CCWWGG	3 cut(s)	153, 1122, 2145
FaqI	GGGAC	1 cut(s)	1322
FauI	CCCGC	1 cut(s)	129
FbaI	TGATCA	2 cut(s)	988, 1497
FblI	GTMKAC	1 cut(s)	1118
Fnu4HI	GCNGC	4 cut(s)	66, 216, 858, 1758
FokI	GGATG	8 cut(s)	409, 623, 887, 926, 1878, 1895, 1937, 2189
Fsp4HI	GCNGC	4 cut(s)	66, 216, 858, 1758
FspBI	CTAG	4 cut(s)	824, 1163, 1491, 1703
GlaI	GCGC	2 cut(s)	219, 1726
GluI	GCNGC	4 cut(s)	66, 216, 858, 1758
GsaI	CCCAGC	1 cut(s)	777
HaeII	RGCGCY	1 cut(s)	1728
HaeIII	GGCC	2 cut(s)	215, 1341
HapII	CCGG	4 cut(s)	212, 1054, 1412, 1878
HgaI	GACGC	1 cut(s)	1559
HhaI	GCGC	2 cut(s)	220, 1727
Hin1I	GRCGYC	1 cut(s)	1570
Hin6I	GCGC	2 cut(s)	218, 1725
HinP1I	GCGC	2 cut(s)	218, 1725
HindIII	AAGCTT	2 cut(s)	677, 1581
HinfI	GANTC	6 cut(s)	512, 668, 1367, 1825, 2088, 2106
HpaII	CCGG	4 cut(s)	212, 1054, 1412, 1878
HphI	GGTGA	7 cut(s)	272, 1060, 1492, 1861, 1868, 1953, 2089
Hpy166II	GTNNAC	7 cut(s)	92, 529, 787, 1051, 1119, 1148, 1449
Hpy188I	TCNGA	8 cut(s)	208, 993, 1172, 1599, 1903, 1975, 2105, 2201
Hpy8I	GTNNAC	7 cut(s)	92, 529, 787, 1051, 1119, 1148, 1449
HpyAV	CCTTC	4 cut(s)	601, 694, 754, 1466
HpyCH4III	ACNGT	3 cut(s)	1361, 1525, 2030
HpyCH4IV	ACGT	4 cut(s)	580, 795, 1220, 1970
HpyF10VI	GCNNNNNNNGC	2 cut(s)	71, 1676
HpyF3I	CTNAG	4 cut(s)	453, 733, 1621, 2102
HpySE526I	ACGT	4 cut(s)	580, 795, 1220, 1970
Hsp92I	GRCGYC	1 cut(s)	1570
HspAI	GCGC	2 cut(s)	218, 1725
Kpn2I	TCCGGA	1 cut(s)	1411
Ksp22I	TGATCA	2 cut(s)	988, 1497
Kzo9I	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
LmnI	GCTCC	5 cut(s)	33, 79, 755, 1157, 1414
Lsp1109I	GCAGC	3 cut(s)	77, 844, 1769
LweI	GCATC	5 cut(s)	212, 760, 984, 1077, 1657
MaeI	CTAG	4 cut(s)	824, 1163, 1491, 1703
MaeII	ACGT	4 cut(s)	580, 795, 1220, 1970
MaeIII	GTNAC	5 cut(s)	260, 320, 721, 2077, 2120
MalI	GATC	9 cut(s)	230, 635, 653, 990, 1208, 1499, 1551, 1713, 1817
MboI	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
MboII	GAAGA	9 cut(s)	229, 709, 880, 1069, 1544, 1631, 1834, 2009, 2107
MfeI	CAATTG	1 cut(s)	2043
MflI	RGATCY	2 cut(s)	1549, 1711
MhlI	GDGCHC	2 cut(s)	1150, 1162
MluCI	AATT	9 cut(s)	126, 142, 254, 294, 755, 918, 1029, 1313, 2043
MlyI	GAGTC	3 cut(s)	677, 1819, 2097
MmeI	TCCRAC	2 cut(s)	101, 1902
Mph1103I	ATGCAT	3 cut(s)	177, 538, 1662
MroI	TCCGGA	1 cut(s)	1411
MroXI	GAANNNNTTC	3 cut(s)	680, 1055, 1299
MseI	TTAA	7 cut(s)	38, 189, 939, 1238, 1350, 1575, 1935
MslI	CAYNNNNRTG	7 cut(s)	50, 329, 466, 489, 1223, 1665, 2215
MspI	CCGG	4 cut(s)	212, 1054, 1412, 1878
MspR9I	CCNGG	9 cut(s)	212, 281, 673, 957, 1321, 1430, 1830, 1879, 2073
MunI	CAATTG	1 cut(s)	2043
Mva1269I	GAATGC	3 cut(s)	631, 1131, 1662
MvaI	CCWGG	7 cut(s)	281, 673, 957, 1321, 1430, 1830, 2073
MvnI	CGCG	2 cut(s)	218, 1785
MwoI	GCNNNNNNNGC	2 cut(s)	71, 1676
NciI	CCSGG	2 cut(s)	212, 1879
NcoI	CCATGG	2 cut(s)	153, 1122
NdeII	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
NlaIV	GGNNCC	6 cut(s)	29, 75, 210, 482, 1713, 2189
NmuCI	GTSAC	3 cut(s)	260, 2077, 2120
NsiI	ATGCAT	3 cut(s)	177, 538, 1662
NspI	RCATGY	5 cut(s)	179, 853, 1249, 1381, 1606
OliI	CACNNNNGTG	1 cut(s)	1223
PaeI	GCATGC	1 cut(s)	179
PaeR7I	CTCGAG	1 cut(s)	884
PagI	TCATGA	3 cut(s)	45, 1864, 2091
PciI	ACATGT	3 cut(s)	849, 1245, 1377
PcsI	WCGNNNNNNNCGW	1 cut(s)	1567
PctI	GAATGC	3 cut(s)	631, 1131, 1662
PdmI	GAANNNNTTC	3 cut(s)	680, 1055, 1299
PfeI	GAWTC	3 cut(s)	512, 1367, 2106
PflFI	GACNNNGTC	1 cut(s)	596
PflMI	CCANNNNNTGG	2 cut(s)	256, 691
PfoI	TCCNGGA	2 cut(s)	671, 955
PinAI	ACCGGT	1 cut(s)	1053
PkrI	GCNGC	4 cut(s)	67, 217, 859, 1759
PleI	GAGTC	3 cut(s)	676, 1819, 2096
PmaCI	CACGTG	1 cut(s)	581
PmlI	CACGTG	1 cut(s)	581
PpsI	GAGTC	3 cut(s)	676, 1819, 2096
Ppu21I	YACGTR	1 cut(s)	581
PpuMI	RGGWCCY	1 cut(s)	2069
PscI	ACATGT	3 cut(s)	849, 1245, 1377
PshBI	ATTAAT	1 cut(s)	1350
PsiI	TTATAA	1 cut(s)	2022
Psp5II	RGGWCCY	1 cut(s)	2069
Psp6I	CCWGG	7 cut(s)	279, 671, 955, 1319, 1428, 1828, 2071
PspCI	CACGTG	1 cut(s)	581
PspFI	CCCAGC	1 cut(s)	773
PspGI	CCWGG	7 cut(s)	279, 671, 955, 1319, 1428, 1828, 2071
PspN4I	GGNNCC	6 cut(s)	29, 75, 210, 482, 1713, 2189
PspPI	GGNCC	4 cut(s)	157, 208, 1020, 2069
PspPPI	RGGWCCY	1 cut(s)	2069
PstI	CTGCAG	2 cut(s)	1405, 1954
PstNI	CAGNNNCTG	1 cut(s)	2109
PsuI	RGATCY	2 cut(s)	1549, 1711
PsyI	GACNNNGTC	1 cut(s)	596
RsaI	GTAC	6 cut(s)	91, 247, 551, 644, 738, 1450
RsaNI	GTAC	6 cut(s)	90, 246, 550, 643, 737, 1449
RseI	CAYNNNNRTG	7 cut(s)	50, 329, 466, 489, 1223, 1665, 2215
SaqAI	TTAA	7 cut(s)	38, 189, 939, 1238, 1350, 1575, 1935
SatI	GCNGC	4 cut(s)	66, 216, 858, 1758
Sau3AI	GATC	9 cut(s)	228, 633, 651, 988, 1206, 1497, 1549, 1711, 1815
Sau96I	GGNCC	4 cut(s)	157, 208, 1020, 2069
ScaI	AGTACT	1 cut(s)	738
SchI	GAGTC	3 cut(s)	677, 1819, 2097
ScrFI	CCNGG	9 cut(s)	212, 281, 673, 957, 1321, 1430, 1830, 1879, 2073
SduI	GDGCHC	2 cut(s)	1150, 1162
SfaNI	GCATC	5 cut(s)	212, 760, 984, 1077, 1657
SfcI	CTRYAG	3 cut(s)	340, 1401, 1950
Sfr274I	CTCGAG	1 cut(s)	884
SinI	GGWCC	4 cut(s)	157, 208, 1020, 2069
SlaI	CTCGAG	1 cut(s)	884
SmiMI	CAYNNNNRTG	7 cut(s)	50, 329, 466, 489, 1223, 1665, 2215
SmlI	CTYRAG	1 cut(s)	884
SmoI	CTYRAG	1 cut(s)	884
SphI	GCATGC	1 cut(s)	179
Sse9I	AATT	9 cut(s)	126, 142, 254, 294, 755, 918, 1029, 1313, 2043
SsiI	CCGC	4 cut(s)	122, 216, 1023, 1783
SspMI	CTAG	4 cut(s)	824, 1163, 1491, 1703
StyD4I	CCNGG	9 cut(s)	210, 279, 671, 955, 1319, 1428, 1828, 1877, 2071
StyI	CCWWGG	3 cut(s)	153, 1122, 2145
TaaI	ACNGT	3 cut(s)	1361, 1525, 2030
TaiI	ACGT	4 cut(s)	583, 798, 1223, 1973
TaqI	TCGA	7 cut(s)	510, 663, 813, 885, 976, 1467, 1561
TasI	AATT	9 cut(s)	126, 142, 254, 294, 755, 918, 1029, 1313, 2043
TatI	WGTACW	3 cut(s)	549, 736, 1448
TauI	GCSGC	1 cut(s)	218
TfiI	GAWTC	3 cut(s)	512, 1367, 2106
Tru1I	TTAA	7 cut(s)	38, 189, 939, 1238, 1350, 1575, 1935
Tru9I	TTAA	7 cut(s)	38, 189, 939, 1238, 1350, 1575, 1935
TscAI	CASTG	2 cut(s)	607, 2035
TseFI	GTSAC	3 cut(s)	260, 2077, 2120
TseI	GCWGC	3 cut(s)	65, 857, 1757
Tsp45I	GTSAC	3 cut(s)	260, 2077, 2120
TspGWI	ACGGA	2 cut(s)	417, 1070
TspRI	CASTG	2 cut(s)	607, 2035
Tth111I	GACNNNGTC	1 cut(s)	596
Van91I	CCANNNNNTGG	2 cut(s)	256, 691
VneI	GTGCAC	1 cut(s)	1146
VpaK11BI	GGWCC	4 cut(s)	157, 208, 1020, 2069
VspI	ATTAAT	1 cut(s)	1350
XapI	RAATTY	2 cut(s)	294, 1313
XceI	RCATGY	5 cut(s)	179, 853, 1249, 1381, 1606
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2201
XhoI	CTCGAG	1 cut(s)	884
XmiI	GTMKAC	1 cut(s)	1118
XmnI	GAANNNNTTC	3 cut(s)	680, 1055, 1299
XspI	CTAG	4 cut(s)	824, 1163, 1491, 1703
ZrmI	AGTACT	1 cut(s)	738
Zsp2I	ATGCAT	3 cut(s)	177, 538, 1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.