Rh2CG513300
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0014857
Physical Location & Seq
Forward (+)
68706186 .. 68727986
21801 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG513300.1

Sequence Viewer

Length: 696 bp
ATGAAGGCCATGCGTCAAGCAAGTTCAACACATTTCGAAATTTCACTACCTGGAATTGGTAGGCTATCTTTGGTTGCTGCATATCATCTGCAACTGTGGGTGGTTCAGGCAGGCACAAAAGAGCTCACCTTTAAGGAGGAGAAGGCCAAGGTCAAAGACTTGCACCTCGAGCTTCTATCTGGGATCTTCATGTCAATGATTTCTATCAATCTCTATTGCTCCACTGTGGTAGATGAAGTAAATACAGGTTATCAAGATGGGTGGAGAAATCAGGGTTGTAAAGAAGGATGGCCAGGAACTTCAATGCAATTGTACTTGGTTCTGGATACACCTGCAGATGGCACTAAACAATATTGTCAAGAAGATTTTGCAAAGCAGTGTAGTGGTGCTGCTTGCACTACATGGCAACATGGTTTTTTGGAGTCATCTAAAATTGCTCTTGATCGTGGAGGCAAAAATGGAGAGCCCAAACAGACCATTGGTTGTATGACAGAGCATGTTGTGGAAACTCGATCATTTGGAATTGTTTTTCAGGCAAAATGCTTGGAAACTGGTGAGACTATGGCTATAAAGAAGATTTTGAAAGACAGAAGAGATAAGGTTTTGAAAGACAGAAGAGATAAGAACAAGGAACGTCAATTGATGCGTGTGATTGATATGTTAACACACCCACTTCAGAACTCTCTAATGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009593 GO:0009653 GO:0009719 GO:0009720 GO:0009725 GO:0009726 GO:0009729 GO:0009733 GO:0009741 GO:0009742 GO:0009755 GO:0009825 GO:0009888 GO:0009965 GO:0009966 GO:0009968 GO:0009987 GO:0010015 GO:0010016 GO:0010033 GO:0010053 GO:0010054 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0046822 GO:0046824 GO:0046825 GO:0046827 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048523 GO:0048545 GO:0048583 GO:0048585 GO:0048731 GO:0048764 GO:0048765 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051222 GO:0051223 GO:0051606 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071695 GO:0071704 GO:0071944 GO:0090087 GO:0090316 GO:0090558 GO:0090627 GO:0099402 GO:0140096 GO:1900457 GO:1900458 GO:1901564 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904951 GO:1905392
KEGG Pathways
Metabolic & Signaling
ko01521 ko04012 ko04062 ko04075 ko04110 ko04150 ko04151 ko04310 ko04340 ko04341 ko04360 ko04390 ko04510 ko04550 ko04657 ko04660 ko04662 ko04711 ko04722 ko04728 ko04910 ko04916 ko04917 ko04919 ko04931 ko04932 ko04934 ko05010 ko05160 ko05162 ko05164 ko05165 ko05166 ko05167 ko05169 ko05200 ko05210 ko05213 ko05215 ko05217 ko05224 ko05225 ko05226 map01521 map04012 map04062 map04075 map04110 map04150 map04151 map04310 map04340 map04341 map04360 map04390 map04510 map04550 map04657 map04660 map04662 map04711 map04722 map04728 map04910 map04916 map04917 map04919 map04931 map04932 map04934 map05010 map05160 map05162 map05164 map05165 map05166 map05167 map05169 map05200 map05210 map05213 map05215 map05217 map05224 map05225 map05226
Pfam Domains
Protein Families
Pkinase

Protein Analysis

231

Amino Acids

26.07

Weight (kDa)

8.62

Isoelectric Point (pI)

30.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 340
Acc36I ACCTGC 1 cut(s) 340
AclWI GGATC 1 cut(s) 191
AcoI YGGCCR 1 cut(s) 290
AcsI RAATTY 1 cut(s) 39
AcuI CTGAAG 1 cut(s) 659
AfaI GTAC 1 cut(s) 314
AfiI CCNNNNNNNGG 2 cut(s) 56, 338
AgsI TTSAA 4 cut(s) 27, 303, 583, 607
AjnI CCWGG 2 cut(s) 49, 292
AluBI AGCT 2 cut(s) 124, 172
AluI AGCT 2 cut(s) 124, 172
Alw21I GWGCWC 1 cut(s) 126
Alw26I GTCTC 1 cut(s) 551
AlwI GGATC 1 cut(s) 191
Ama87I CYCGRG 1 cut(s) 167
AoxI GGCC 3 cut(s) 6, 144, 290
ApeKI GCWGC 2 cut(s) 77, 389
ApoI RAATTY 1 cut(s) 39
AsuHPI GGTGA 2 cut(s) 118, 566
AsuII TTCGAA 1 cut(s) 36
AvaI CYCGRG 1 cut(s) 167
BalI TGGCCA 1 cut(s) 292
BanII GRGCYC 2 cut(s) 126, 468
Bbv12I GWGCWC 1 cut(s) 126
BbvI GCAGC 2 cut(s) 64, 376
BccI CCATC 3 cut(s) 251, 282, 332
BciT130I CCWGG 2 cut(s) 51, 294
BciVI GTATCC 1 cut(s) 319
BcoDI GTCTC 1 cut(s) 551
BfmI CTRYAG 1 cut(s) 333
BfuAI ACCTGC 1 cut(s) 340
BfuI GTATCC 1 cut(s) 319
BisI GCNGC 2 cut(s) 78, 390
BlsI GCNGC 2 cut(s) 79, 391
Bme1390I CCNGG 2 cut(s) 51, 294
BmeT110I CYCGRG 1 cut(s) 167
BmrFI CCNGG 2 cut(s) 51, 294
BmsI GCATC 1 cut(s) 633
Bpu14I TTCGAA 1 cut(s) 36
BsaBI GATNNNNATC 1 cut(s) 203
BsaJI CCNNGG 1 cut(s) 147
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 338
Bse1I ACTGG 1 cut(s) 556
Bse8I GATNNNNATC 1 cut(s) 203
BseBI CCWGG 2 cut(s) 51, 294
BseDI CCNNGG 1 cut(s) 147
BseGI GGATG 1 cut(s) 293
BseJI GATNNNNATC 1 cut(s) 203
BseLI CCNNNNNNNGG 2 cut(s) 56, 338
BseNI ACTGG 1 cut(s) 556
BseRI GAGGAG 1 cut(s) 152
BseXI GCAGC 2 cut(s) 64, 376
BshFI GGCC 3 cut(s) 8, 146, 292
BsiHKAI GWGCWC 1 cut(s) 126
BsiHKCI CYCGRG 1 cut(s) 167
BslI CCNNNNNNNGG 2 cut(s) 56, 338
BsmAI GTCTC 1 cut(s) 551
BsnI GGCC 3 cut(s) 8, 146, 292
BsoBI CYCGRG 1 cut(s) 167
Bsp119I TTCGAA 1 cut(s) 36
Bsp1286I GDGCHC 2 cut(s) 126, 468
Bsp143I GATC 3 cut(s) 183, 442, 512
BspANI GGCC 3 cut(s) 8, 146, 292
BspMAI CTGCAG 1 cut(s) 337
BspMI ACCTGC 1 cut(s) 340
BspPI GGATC 1 cut(s) 191
BspT104I TTCGAA 1 cut(s) 36
BsrI ACTGG 1 cut(s) 556
BssECI CCNNGG 1 cut(s) 147
BssMI GATC 3 cut(s) 183, 442, 512
BssT1I CCWWGG 1 cut(s) 147
Bst2UI CCWGG 2 cut(s) 51, 294
Bst4CI ACNGT 2 cut(s) 96, 226
Bst6I CTCTTC 2 cut(s) 586, 610
BstBI TTCGAA 1 cut(s) 36
BstC8I GCNNGC 2 cut(s) 112, 394
BstF5I GGATG 1 cut(s) 293
BstKTI GATC 3 cut(s) 186, 445, 515
BstMAI GTCTC 1 cut(s) 551
BstMBI GATC 3 cut(s) 183, 442, 512
BstMWI GCNNNNNNNGC 1 cut(s) 169
BstNI CCWGG 2 cut(s) 51, 294
BstNSI RCATGY 1 cut(s) 500
BstSCI CCNGG 2 cut(s) 49, 292
BstSFI CTRYAG 1 cut(s) 333
BstV1I GCAGC 2 cut(s) 64, 376
BstX2I RGATCY 1 cut(s) 183
BstYI RGATCY 1 cut(s) 183
BsuI GTATCC 1 cut(s) 319
BsuRI GGCC 3 cut(s) 8, 146, 292
BtsCI GGATG 1 cut(s) 293
BtsI GCAGTG 1 cut(s) 383
BtsIMutI CAGTG 2 cut(s) 222, 383
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 2 cut(s) 112, 394
CseI GACGC 1 cut(s) 2
Csp6I GTAC 1 cut(s) 313
CspCI CAANNNNNGTGG 2 cut(s) 242, 277
CviAII CATG 5 cut(s) 10, 190, 402, 410, 497
CviJI RGCY 8 cut(s) 8, 64, 124, 146, 172, 292, 466, 566
CviKI_1 RGCY 8 cut(s) 8, 64, 124, 146, 172, 292, 466, 566
CviQI GTAC 1 cut(s) 313
DpnI GATC 3 cut(s) 185, 444, 514
DpnII GATC 3 cut(s) 183, 442, 512
EaeI YGGCCR 1 cut(s) 290
Eam1104I CTCTTC 2 cut(s) 586, 610
EarI CTCTTC 2 cut(s) 586, 610
Ecl136II GAGCTC 1 cut(s) 124
Eco130I CCWWGG 1 cut(s) 147
Eco24I GRGCYC 2 cut(s) 126, 468
Eco53kI GAGCTC 1 cut(s) 124
Eco57I CTGAAG 1 cut(s) 659
Eco88I CYCGRG 1 cut(s) 167
EcoICRI GAGCTC 1 cut(s) 124
EcoRII CCWGG 2 cut(s) 49, 292
EcoT14I CCWWGG 1 cut(s) 147
EcoT38I GRGCYC 2 cut(s) 126, 468
ErhI CCWWGG 1 cut(s) 147
FaeI CATG 5 cut(s) 13, 193, 405, 413, 500
FatI CATG 5 cut(s) 9, 189, 401, 409, 496
Fnu4HI GCNGC 2 cut(s) 78, 390
FokI GGATG 1 cut(s) 300
FriOI GRGCYC 2 cut(s) 126, 468
Fsp4HI GCNGC 2 cut(s) 78, 390
GluI GCNGC 2 cut(s) 78, 390
HaeIII GGCC 3 cut(s) 8, 146, 292
HgaI GACGC 1 cut(s) 2
Hin1II CATG 5 cut(s) 13, 193, 405, 413, 500
HincII GTYRAC 1 cut(s) 663
HindII GTYRAC 1 cut(s) 663
HinfI GANTC 1 cut(s) 422
HpaI GTTAAC 1 cut(s) 663
HphI GGTGA 2 cut(s) 118, 566
Hpy166II GTNNAC 1 cut(s) 663
Hpy188I TCNGA 1 cut(s) 678
Hpy188III TCNNGA 4 cut(s) 254, 323, 359, 440
Hpy8I GTNNAC 1 cut(s) 663
HpyAV CCTTC 2 cut(s) 136, 278
HpyCH4III ACNGT 2 cut(s) 96, 226
HpyCH4IV ACGT 1 cut(s) 634
HpyCH4V TGCA 7 cut(s) 80, 91, 163, 307, 335, 371, 396
HpyF10VI GCNNNNNNNGC 1 cut(s) 169
HpySE526I ACGT 1 cut(s) 634
Hsp92II CATG 5 cut(s) 13, 193, 405, 413, 500
KspAI GTTAAC 1 cut(s) 663
Kzo9I GATC 3 cut(s) 183, 442, 512
LmnI GCTCC 1 cut(s) 224
Lsp1109I GCAGC 2 cut(s) 64, 376
LweI GCATC 1 cut(s) 633
MaeII ACGT 1 cut(s) 634
MalI GATC 3 cut(s) 185, 444, 514
MboI GATC 3 cut(s) 183, 442, 512
MboII GAAGA 5 cut(s) 178, 374, 586, 603, 627
MfeI CAATTG 2 cut(s) 308, 638
MflI RGATCY 1 cut(s) 183
MhlI GDGCHC 2 cut(s) 126, 468
MlsI TGGCCA 1 cut(s) 292
MluCI AATT 6 cut(s) 39, 54, 308, 432, 522, 638
MluNI TGGCCA 1 cut(s) 292
MlyI GAGTC 1 cut(s) 431
MnlI CCTC 3 cut(s) 130, 176, 443
Mox20I TGGCCA 1 cut(s) 292
MscI TGGCCA 1 cut(s) 292
MseI TTAA 2 cut(s) 132, 662
MslI CAYNNNNRTG 1 cut(s) 194
Msp20I TGGCCA 1 cut(s) 292
MspR9I CCNGG 2 cut(s) 51, 294
MunI CAATTG 2 cut(s) 308, 638
MvaI CCWGG 2 cut(s) 51, 294
MwoI GCNNNNNNNGC 1 cut(s) 169
NdeII GATC 3 cut(s) 183, 442, 512
NlaIII CATG 5 cut(s) 13, 193, 405, 413, 500
NspI RCATGY 1 cut(s) 500
NspV TTCGAA 1 cut(s) 36
PaeR7I CTCGAG 1 cut(s) 167
PaqCI CACCTGC 1 cut(s) 340
PkrI GCNGC 2 cut(s) 79, 391
PleI GAGTC 1 cut(s) 430
PpsI GAGTC 1 cut(s) 430
Psp124BI GAGCTC 1 cut(s) 126
Psp6I CCWGG 2 cut(s) 49, 292
PspGI CCWGG 2 cut(s) 49, 292
PspXI VCTCGAGB 1 cut(s) 167
PstI CTGCAG 1 cut(s) 337
PsuI RGATCY 1 cut(s) 183
RsaI GTAC 1 cut(s) 314
RsaNI GTAC 1 cut(s) 313
RseI CAYNNNNRTG 1 cut(s) 194
SacI GAGCTC 1 cut(s) 126
SaqAI TTAA 2 cut(s) 132, 662
SatI GCNGC 2 cut(s) 78, 390
Sau3AI GATC 3 cut(s) 183, 442, 512
SchI GAGTC 1 cut(s) 431
ScrFI CCNGG 2 cut(s) 51, 294
SduI GDGCHC 2 cut(s) 126, 468
SfaNI GCATC 1 cut(s) 633
SfcI CTRYAG 1 cut(s) 333
Sfr274I CTCGAG 1 cut(s) 167
SfuI TTCGAA 1 cut(s) 36
SlaI CTCGAG 1 cut(s) 167
SmiMI CAYNNNNRTG 1 cut(s) 194
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
Sse9I AATT 6 cut(s) 39, 54, 308, 432, 522, 638
SspI AATATT 1 cut(s) 353
SstI GAGCTC 1 cut(s) 126
StyD4I CCNGG 2 cut(s) 49, 292
StyI CCWWGG 1 cut(s) 147
TaaI ACNGT 2 cut(s) 96, 226
TaiI ACGT 1 cut(s) 637
TaqI TCGA 3 cut(s) 36, 168, 511
TasI AATT 6 cut(s) 39, 54, 308, 432, 522, 638
TatI WGTACW 1 cut(s) 312
Tru1I TTAA 2 cut(s) 132, 662
Tru9I TTAA 2 cut(s) 132, 662
TscAI CASTG 2 cut(s) 229, 383
TseI GCWGC 2 cut(s) 77, 389
TspDTI ATGAA 3 cut(s) 17, 178, 249
TspRI CASTG 2 cut(s) 229, 383
XapI RAATTY 1 cut(s) 39
XceI RCATGY 1 cut(s) 500
XhoI CTCGAG 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.