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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0255591 RchiOBHm_Chr7g0201351 |
| rosa_laevigata | RLG00000034031 |
| rosa_multiflora | Rmu_sc0007618.1_g000021 Rmu_sc0011008.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00039500 Rroxscaffold_4G00299840 Rroxscaffold_6G00398260 |
| rosa_samantha | Rh2CG513300 Rh5CG201100 Rh5CG313100 Rh6BG226600 Rh6CG229200 Rh6DG220300 Rh7BG289100 Rh7BG444400 |
| rosa_wichuraiana | Rw4G012430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 413 |
| AclWI | GGATC | 1 cut(s) | 239 |
| AcoI | YGGCCR | 1 cut(s) | 99 |
| AcsI | RAATTY | 1 cut(s) | 484 |
| AcyI | GRCGYC | 1 cut(s) | 237 |
| AfaI | GTAC | 1 cut(s) | 357 |
| AgsI | TTSAA | 4 cut(s) | 207, 296, 348, 492 |
| AluBI | AGCT | 8 cut(s) | 45, 211, 326, 375, 380, 407, 453, 470 |
| AluI | AGCT | 8 cut(s) | 45, 211, 326, 375, 380, 407, 453, 470 |
| Alw26I | GTCTC | 1 cut(s) | 91 |
| AlwI | GGATC | 1 cut(s) | 239 |
| Ama87I | CYCGRG | 1 cut(s) | 9 |
| AoxI | GGCC | 1 cut(s) | 99 |
| ApeKI | GCWGC | 1 cut(s) | 42 |
| ApoI | RAATTY | 1 cut(s) | 484 |
| AspS9I | GGNCC | 1 cut(s) | 226 |
| AsuHPI | GGTGA | 2 cut(s) | 124, 264 |
| AvaI | CYCGRG | 1 cut(s) | 9 |
| AvaII | GGWCC | 1 cut(s) | 226 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 347, 347, 380, 380 |
| BalI | TGGCCA | 1 cut(s) | 101 |
| BbvI | GCAGC | 1 cut(s) | 54 |
| BccI | CCATC | 3 cut(s) | 56, 263, 383 |
| BceAI | ACGGC | 1 cut(s) | 224 |
| BcoDI | GTCTC | 1 cut(s) | 91 |
| BfmI | CTRYAG | 2 cut(s) | 40, 402 |
| BisI | GCNGC | 2 cut(s) | 43, 413 |
| BlpI | GCTNAGC | 1 cut(s) | 376 |
| BlsI | GCNGC | 2 cut(s) | 44, 414 |
| Bme18I | GGWCC | 1 cut(s) | 226 |
| BmeT110I | CYCGRG | 1 cut(s) | 9 |
| BmgT120I | GGNCC | 1 cut(s) | 226 |
| BmrI | ACTGGG | 1 cut(s) | 109 |
| BmuI | ACTGGG | 1 cut(s) | 109 |
| BpmI | CTGGAG | 1 cut(s) | 469 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 376 |
| Bsa29I | ATCGAT | 1 cut(s) | 258 |
| BsaHI | GRCGYC | 1 cut(s) | 237 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 5, 35 |
| Bse1I | ACTGG | 2 cut(s) | 115, 452 |
| BseCI | ATCGAT | 1 cut(s) | 258 |
| BseGI | GGATG | 1 cut(s) | 48 |
| BseMII | CTCAG | 4 cut(s) | 51, 96, 390, 494 |
| BseNI | ACTGG | 2 cut(s) | 115, 452 |
| BseRI | GAGGAG | 1 cut(s) | 330 |
| BseXI | GCAGC | 1 cut(s) | 54 |
| BshFI | GGCC | 1 cut(s) | 101 |
| BshVI | ATCGAT | 1 cut(s) | 258 |
| BsiHKCI | CYCGRG | 1 cut(s) | 9 |
| BslFI | GGGAC | 1 cut(s) | 26 |
| BsmAI | GTCTC | 1 cut(s) | 91 |
| BsmFI | GGGAC | 1 cut(s) | 26 |
| BsnI | GGCC | 1 cut(s) | 101 |
| BsoBI | CYCGRG | 1 cut(s) | 9 |
| Bsp143I | GATC | 3 cut(s) | 30, 244, 259 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 376 |
| BspACI | CCGC | 1 cut(s) | 413 |
| BspANI | GGCC | 1 cut(s) | 101 |
| BspCNI | CTCAG | 4 cut(s) | 52, 95, 389, 493 |
| BspDI | ATCGAT | 1 cut(s) | 258 |
| BspMAI | CTGCAG | 1 cut(s) | 44 |
| BspPI | GGATC | 1 cut(s) | 239 |
| BsrI | ACTGG | 2 cut(s) | 115, 452 |
| BssMI | GATC | 3 cut(s) | 30, 244, 259 |
| BssNI | GRCGYC | 1 cut(s) | 237 |
| Bst4CI | ACNGT | 1 cut(s) | 276 |
| Bst6I | CTCTTC | 1 cut(s) | 274 |
| BstACI | GRCGYC | 1 cut(s) | 237 |
| BstDEI | CTNAG | 5 cut(s) | 60, 82, 329, 376, 480 |
| BstF5I | GGATG | 1 cut(s) | 48 |
| BstKTI | GATC | 3 cut(s) | 33, 247, 262 |
| BstMAI | GTCTC | 1 cut(s) | 91 |
| BstMBI | GATC | 3 cut(s) | 30, 244, 259 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 404, 418 |
| BstSFI | CTRYAG | 2 cut(s) | 40, 402 |
| BstV1I | GCAGC | 1 cut(s) | 54 |
| Bsu15I | ATCGAT | 1 cut(s) | 258 |
| BsuRI | GGCC | 1 cut(s) | 101 |
| BsuTUI | ATCGAT | 1 cut(s) | 258 |
| BtsCI | GGATG | 1 cut(s) | 48 |
| Cfr13I | GGNCC | 1 cut(s) | 226 |
| ClaI | ATCGAT | 1 cut(s) | 258 |
| CseI | GACGC | 1 cut(s) | 245 |
| Csp6I | GTAC | 1 cut(s) | 356 |
| CviAII | CATG | 1 cut(s) | 430 |
| CviJI | RGCY | 9 cut(s) | 45, 101, 211, 326, 375, 380, 407, 453, 470 |
| CviKI_1 | RGCY | 9 cut(s) | 45, 101, 211, 326, 375, 380, 407, 453, 470 |
| CviQI | GTAC | 1 cut(s) | 356 |
| DdeI | CTNAG | 5 cut(s) | 60, 82, 329, 376, 480 |
| DpnI | GATC | 3 cut(s) | 32, 246, 261 |
| DpnII | GATC | 3 cut(s) | 30, 244, 259 |
| EaeI | YGGCCR | 1 cut(s) | 99 |
| Eam1104I | CTCTTC | 1 cut(s) | 274 |
| EarI | CTCTTC | 1 cut(s) | 274 |
| Eco32I | GATATC | 1 cut(s) | 6 |
| Eco47I | GGWCC | 1 cut(s) | 226 |
| Eco88I | CYCGRG | 1 cut(s) | 9 |
| EcoRV | GATATC | 1 cut(s) | 6 |
| FaeI | CATG | 1 cut(s) | 433 |
| FaiI | YATR | 3 cut(s) | 353, 404, 431 |
| FaqI | GGGAC | 1 cut(s) | 26 |
| FatI | CATG | 1 cut(s) | 429 |
| Fnu4HI | GCNGC | 2 cut(s) | 43, 413 |
| FokI | GGATG | 1 cut(s) | 35 |
| Fsp4HI | GCNGC | 2 cut(s) | 43, 413 |
| GluI | GCNGC | 2 cut(s) | 43, 413 |
| GsuI | CTGGAG | 1 cut(s) | 469 |
| HaeIII | GGCC | 1 cut(s) | 101 |
| HgaI | GACGC | 1 cut(s) | 245 |
| Hin1I | GRCGYC | 1 cut(s) | 237 |
| Hin1II | CATG | 1 cut(s) | 433 |
| HindIII | AAGCTT | 1 cut(s) | 209 |
| HinfI | GANTC | 4 cut(s) | 194, 287, 316, 426 |
| HphI | GGTGA | 2 cut(s) | 124, 264 |
| Hpy188I | TCNGA | 2 cut(s) | 61, 483 |
| Hpy188III | TCNNGA | 3 cut(s) | 11, 28, 386 |
| Hpy99I | CGWCG | 2 cut(s) | 168, 426 |
| HpyAV | CCTTC | 2 cut(s) | 34, 170 |
| HpyCH4III | ACNGT | 1 cut(s) | 276 |
| HpyCH4V | TGCA | 1 cut(s) | 42 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 404, 418 |
| HpyF3I | CTNAG | 5 cut(s) | 60, 82, 329, 376, 480 |
| Hsp92I | GRCGYC | 1 cut(s) | 237 |
| Hsp92II | CATG | 1 cut(s) | 433 |
| Kzo9I | GATC | 3 cut(s) | 30, 244, 259 |
| LmnI | GCTCC | 2 cut(s) | 50, 450 |
| LpnPI | CCDG | 5 cut(s) | 105, 128, 246, 336, 433 |
| Lsp1109I | GCAGC | 1 cut(s) | 54 |
| MaeIII | GTNAC | 1 cut(s) | 334 |
| MalI | GATC | 3 cut(s) | 32, 246, 261 |
| MboI | GATC | 3 cut(s) | 30, 244, 259 |
| MboII | GAAGA | 3 cut(s) | 85, 209, 261 |
| MlsI | TGGCCA | 1 cut(s) | 101 |
| MluCI | AATT | 3 cut(s) | 124, 484, 505 |
| MluNI | TGGCCA | 1 cut(s) | 101 |
| MlyI | GAGTC | 3 cut(s) | 281, 310, 435 |
| MmeI | TCCRAC | 1 cut(s) | 258 |
| MnlI | CCTC | 6 cut(s) | 47, 140, 277, 351, 451, 489 |
| Mox20I | TGGCCA | 1 cut(s) | 101 |
| MscI | TGGCCA | 1 cut(s) | 101 |
| MseI | TTAA | 3 cut(s) | 54, 213, 508 |
| Msp20I | TGGCCA | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 404, 418 |
| NdeII | GATC | 3 cut(s) | 30, 244, 259 |
| NlaIII | CATG | 1 cut(s) | 433 |
| NmuCI | GTSAC | 1 cut(s) | 334 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 153 |
| PfeI | GAWTC | 1 cut(s) | 194 |
| PkrI | GCNGC | 2 cut(s) | 44, 414 |
| PleI | GAGTC | 3 cut(s) | 281, 310, 434 |
| PpsI | GAGTC | 3 cut(s) | 281, 310, 434 |
| PspPI | GGNCC | 1 cut(s) | 226 |
| PstI | CTGCAG | 1 cut(s) | 44 |
| RsaI | GTAC | 1 cut(s) | 357 |
| RsaNI | GTAC | 1 cut(s) | 356 |
| SaqAI | TTAA | 3 cut(s) | 54, 213, 508 |
| SatI | GCNGC | 2 cut(s) | 43, 413 |
| Sau3AI | GATC | 3 cut(s) | 30, 244, 259 |
| Sau96I | GGNCC | 1 cut(s) | 226 |
| SchI | GAGTC | 3 cut(s) | 281, 310, 435 |
| SfcI | CTRYAG | 2 cut(s) | 40, 402 |
| SinI | GGWCC | 1 cut(s) | 226 |
| Sse9I | AATT | 3 cut(s) | 124, 484, 505 |
| SsiI | CCGC | 1 cut(s) | 413 |
| TaaI | ACNGT | 1 cut(s) | 276 |
| TaqI | TCGA | 4 cut(s) | 33, 163, 258, 314 |
| TasI | AATT | 3 cut(s) | 124, 484, 505 |
| TauI | GCSGC | 1 cut(s) | 415 |
| TfiI | GAWTC | 1 cut(s) | 194 |
| Tru1I | TTAA | 3 cut(s) | 54, 213, 508 |
| Tru9I | TTAA | 3 cut(s) | 54, 213, 508 |
| TseFI | GTSAC | 1 cut(s) | 334 |
| TseI | GCWGC | 1 cut(s) | 42 |
| Tsp45I | GTSAC | 1 cut(s) | 334 |
| TspGWI | ACGGA | 1 cut(s) | 280 |
| VpaK11BI | GGWCC | 1 cut(s) | 226 |
| XapI | RAATTY | 1 cut(s) | 484 |