Rh7BG444400

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0014857
Physical Location & Seq
Reverse (-)
51738690 .. 51751371
12682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG444400.1

Sequence Viewer

Length: 1209 bp
ATGAGAGAGTGGTTATTCAAGCTTTGGGTTGGAAAACCAGGAATGAGAGACTTGATCTGGAAGGGAGCATGTCTTGCACTAAATGCTAGCATATGGTCAGAGTCCCTGGCAGAAATTTGTGCCTTCCACAAATTGCCTTCTCCAACAGATGATGAGAGGCTTCCTGTTGGCACGGGTAGCAATCCTGTCAAAGGAGATGTTTCTCCTTTTGGTGTATGGAGGAAGAAACAATTTGAATACAGAAAAGCTGGGGTCTCAACAAACGAATCCATCAGTTCAGCTGAATATACAAGGATATGGCCATATCTCATAGCAAAACGATGCAAAGGAAAAATATATGCAGAGTTAAGAGATACTGTGTCACGGGAAGATGAACTGAACTTAGCTTCCTTCCTGGGAGAGCAGCTCCGTAACCTGTATCTCTTGCCCCGTCCACCTCTTAATATCTCAACTTTCTCAGATATTGAACAGGAATCAGATTTTCCCTTCACCAACAGTAGTATGGAAGCTGTTCCCCACAAATCAAACATTCCTGCTGAATGGGATATATTCATTAGAACTCTATCCAAGAAGAAGAAGGATGTCTCAAGTCGCTTGATTAAATGGGGAGATCCAATTCCTAGCACACTCATAGAAAAAGTTGACAAATACATCCCAGATGATTTTGCCAAGTTTCTGTACATGTTCAAGTTTGTATACAAAACCACCAAGGCAAACAAAGACAAAGAAGAGAGGCACGCAGGCCAAACAACTATCCAATCAAAGTCTCGCTTGCCTATCATCGGGAGTGACTCGATAGCCCAAGGTAGCAGCCACCAGGACACAAAGCTTGCAATCTACGCACCAGAGACAATCCAAGGTCACCCAAAATTGATCTGGACACCCAGATCTTCCCTGGTGTCCTCGTCTCTCAGCGGCAACTCCCCCACGGAGCTCAACCATCTCGGTGACCCAATTCCGAGCACCTTCACATCCCGGTACCCATGCTCCATCTCAGCAGCTTCTCTTGCCAGCAGCTTTGCTTTTCGGTATCAACTTCGCTCCCCGGCAGCACTTTCCCCTCCGACGAGTCCCCCCGACCTATTCACAGCAGATTCCAAAGTTTCAAAACTCAATCTTCCAAAGGACCAACCAGACGCCGTTGATCCAAGACCCATCGATCTGTCCTCTGTAGATTCGCCGTTGGATTTTGACTCCGTTGAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

402

Amino Acids

44.95

Weight (kDa)

8.45

Isoelectric Point (pI)

48.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 978
AccB1I GGYRCC 1 cut(s) 978
AccI GTMKAC 1 cut(s) 696
AciI CCGC 1 cut(s) 915
AclWI GGATC 2 cut(s) 605, 1139
AcoI YGGCCR 1 cut(s) 299
AcsI RAATTY 1 cut(s) 114
AcyI GRCGYC 1 cut(s) 1137
AfaI GTAC 2 cut(s) 680, 980
AfiI CCNNNNNNNGG 2 cut(s) 191, 782
AflIII ACRYGT 1 cut(s) 681
AgsI TTSAA 6 cut(s) 19, 236, 467, 688, 1107, 1202
AjnI CCWGG 5 cut(s) 37, 105, 393, 816, 894
AloI GAACNNNNNNTCC 2 cut(s) 371, 403
Alw21I GWGCWC 2 cut(s) 936, 965
Alw26I GTCTC 6 cut(s) 42, 259, 589, 771, 842, 912
AlwI GGATC 2 cut(s) 605, 1139
AoxI GGCC 2 cut(s) 299, 742
ApeKI GCWGC 5 cut(s) 403, 810, 998, 1014, 1049
ApoI RAATTY 1 cut(s) 114
Asp700I GAANNNNTTC 1 cut(s) 510
Asp718I GGTACC 1 cut(s) 978
AspS9I GGNCC 1 cut(s) 1126
AsuC2I CCSGG 2 cut(s) 976, 1046
AsuHPI GGTGA 3 cut(s) 481, 854, 959
AsuNHI GCTAGC 1 cut(s) 86
AvaII GGWCC 1 cut(s) 1126
BalI TGGCCA 1 cut(s) 301
BanI GGYRCC 1 cut(s) 978
BanII GRGCYC 1 cut(s) 936
Bbv12I GWGCWC 2 cut(s) 936, 965
BbvI GCAGC 5 cut(s) 415, 822, 1010, 1026, 1061
BccI CCATC 4 cut(s) 278, 948, 998, 1163
BceAI ACGGC 2 cut(s) 1124, 1165
BciT130I CCWGG 5 cut(s) 39, 107, 395, 818, 896
BcnI CCSGG 2 cut(s) 976, 1046
BcoDI GTCTC 6 cut(s) 42, 259, 589, 771, 842, 912
BfaI CTAG 2 cut(s) 87, 621
BfmI CTRYAG 1 cut(s) 1170
BglII AGATCT 1 cut(s) 887
BisI GCNGC 6 cut(s) 404, 811, 916, 999, 1015, 1050
BlsI GCNGC 6 cut(s) 405, 812, 917, 1000, 1016, 1051
Bme1390I CCNGG 7 cut(s) 39, 107, 395, 818, 896, 976, 1046
Bme18I GGWCC 1 cut(s) 1126
BmgT120I GGNCC 1 cut(s) 1126
BmiI GGNNCC 1 cut(s) 980
BmrFI CCNGG 7 cut(s) 39, 107, 395, 818, 896, 976, 1046
BmsI GCATC 1 cut(s) 311
BmtI GCTAGC 1 cut(s) 90
BplI GAGNNNNNCTC 2 cut(s) 390, 422
BpuEI CTTGAG 1 cut(s) 571
BpuMI CCSGG 2 cut(s) 976, 1046
Bsa29I ATCGAT 1 cut(s) 1158
BsaHI GRCGYC 1 cut(s) 1137
BsaI GGTCTC 1 cut(s) 259
BsaJI CCNNGG 8 cut(s) 105, 394, 708, 802, 856, 894, 927, 1044
BsaXI ACNNNNNCTCC 2 cut(s) 971, 1001
Bsc4I CCNNNNNNNGG 2 cut(s) 191, 782
BseBI CCWGG 5 cut(s) 39, 107, 395, 818, 896
BseCI ATCGAT 1 cut(s) 1158
BseDI CCNNGG 8 cut(s) 105, 394, 708, 802, 856, 894, 927, 1044
BseGI GGATG 3 cut(s) 586, 651, 971
BseLI CCNNNNNNNGG 2 cut(s) 191, 782
BseMII CTCAG 3 cut(s) 471, 925, 1008
BseXI GCAGC 5 cut(s) 415, 822, 1010, 1026, 1061
BseYI CCCAGC 1 cut(s) 248
BshFI GGCC 2 cut(s) 301, 744
BshNI GGYRCC 1 cut(s) 978
BshVI ATCGAT 1 cut(s) 1158
BsiHKAI GWGCWC 2 cut(s) 936, 965
BsiSI CCGG 2 cut(s) 976, 1046
BslFI GGGAC 2 cut(s) 88, 1056
BslI CCNNNNNNNGG 2 cut(s) 191, 782
BsmAI GTCTC 6 cut(s) 42, 259, 589, 771, 842, 912
BsmBI CGTCTC 1 cut(s) 912
BsmFI GGGAC 2 cut(s) 88, 1056
BsnI GGCC 2 cut(s) 301, 744
Bso31I GGTCTC 1 cut(s) 259
Bsp1286I GDGCHC 2 cut(s) 936, 965
Bsp1407I TGTACA 1 cut(s) 678
Bsp143I GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
BspACI CCGC 1 cut(s) 915
BspANI GGCC 2 cut(s) 301, 744
BspCNI CTCAG 3 cut(s) 470, 924, 1007
BspDI ATCGAT 1 cut(s) 1158
BspLI GGNNCC 1 cut(s) 980
BspOI GCTAGC 1 cut(s) 90
BspPI GGATC 2 cut(s) 605, 1139
BspT107I GGYRCC 1 cut(s) 978
BspTNI GGTCTC 1 cut(s) 259
BsrGI TGTACA 1 cut(s) 678
BssECI CCNNGG 8 cut(s) 105, 394, 708, 802, 856, 894, 927, 1044
BssMI GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
BssNAI GTATAC 1 cut(s) 697
BssNI GRCGYC 1 cut(s) 1137
BssT1I CCWWGG 3 cut(s) 708, 802, 856
Bst1107I GTATAC 1 cut(s) 697
Bst2UI CCWGG 5 cut(s) 39, 107, 395, 818, 896
Bst4CI ACNGT 2 cut(s) 358, 497
Bst6I CTCTTC 1 cut(s) 723
BstACI GRCGYC 1 cut(s) 1137
BstAPI GCANNNNNTGC 2 cut(s) 74, 83
BstAUI TGTACA 1 cut(s) 678
BstC8I GCNNGC 6 cut(s) 88, 738, 742, 773, 831, 1012
BstDEI CTNAG 4 cut(s) 382, 457, 911, 994
BstDSI CCRYGG 1 cut(s) 927
BstEII GGTNACC 2 cut(s) 860, 947
BstENI CCTNNNNNAGG 1 cut(s) 189
BstF5I GGATG 3 cut(s) 586, 651, 971
BstKTI GATC 6 cut(s) 57, 613, 876, 890, 1147, 1162
BstMAI GTCTC 6 cut(s) 42, 259, 589, 771, 842, 912
BstMBI GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
BstMWI GCNNNNNNNGC 5 cut(s) 74, 83, 177, 839, 1007
BstNI CCWGG 5 cut(s) 39, 107, 395, 818, 896
BstNSI RCATGY 2 cut(s) 72, 685
BstPI GGTNACC 2 cut(s) 860, 947
BstSCI CCNGG 7 cut(s) 37, 105, 393, 816, 894, 974, 1044
BstSFI CTRYAG 1 cut(s) 1170
BstV1I GCAGC 5 cut(s) 415, 822, 1010, 1026, 1061
BstX2I RGATCY 2 cut(s) 610, 887
BstYI RGATCY 2 cut(s) 610, 887
BstZ17I GTATAC 1 cut(s) 697
Bsu15I ATCGAT 1 cut(s) 1158
BsuRI GGCC 2 cut(s) 301, 744
BsuTUI ATCGAT 1 cut(s) 1158
BtgI CCRYGG 1 cut(s) 927
BtsCI GGATG 3 cut(s) 586, 651, 971
Cac8I GCNNGC 6 cut(s) 88, 738, 742, 773, 831, 1012
Cfr13I GGNCC 1 cut(s) 1126
ClaI ATCGAT 1 cut(s) 1158
CseI GACGC 1 cut(s) 1145
Csp6I GTAC 2 cut(s) 679, 979
CviAII CATG 3 cut(s) 69, 682, 984
CviQI GTAC 2 cut(s) 679, 979
DdeI CTNAG 4 cut(s) 382, 457, 911, 994
DpnI GATC 6 cut(s) 56, 612, 875, 889, 1146, 1161
DpnII GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
EaeI YGGCCR 1 cut(s) 299
Eam1104I CTCTTC 1 cut(s) 723
EarI CTCTTC 1 cut(s) 723
Ecl136II GAGCTC 1 cut(s) 934
Eco130I CCWWGG 3 cut(s) 708, 802, 856
Eco24I GRGCYC 1 cut(s) 936
Eco31I GGTCTC 1 cut(s) 259
Eco47I GGWCC 1 cut(s) 1126
Eco53kI GAGCTC 1 cut(s) 934
Eco91I GGTNACC 2 cut(s) 860, 947
EcoICRI GAGCTC 1 cut(s) 934
EcoNI CCTNNNNNAGG 1 cut(s) 189
EcoO65I GGTNACC 2 cut(s) 860, 947
EcoRII CCWGG 5 cut(s) 37, 105, 393, 816, 894
EcoT14I CCWWGG 3 cut(s) 708, 802, 856
EcoT38I GRGCYC 1 cut(s) 936
ErhI CCWWGG 3 cut(s) 708, 802, 856
Esp3I CGTCTC 1 cut(s) 912
FaeI CATG 3 cut(s) 72, 685, 987
FalI AAGNNNNNCTT 2 cut(s) 755, 787
FaqI GGGAC 2 cut(s) 88, 1056
FatI CATG 3 cut(s) 68, 681, 983
FauNDI CATATG 1 cut(s) 92
FblI GTMKAC 1 cut(s) 696
Fnu4HI GCNGC 6 cut(s) 404, 811, 916, 999, 1015, 1050
FokI GGATG 3 cut(s) 593, 638, 958
FriOI GRGCYC 1 cut(s) 936
Fsp4HI GCNGC 6 cut(s) 404, 811, 916, 999, 1015, 1050
FspBI CTAG 2 cut(s) 87, 621
GluI GCNGC 6 cut(s) 404, 811, 916, 999, 1015, 1050
GsaI CCCAGC 1 cut(s) 252
HaeIII GGCC 2 cut(s) 301, 744
HapII CCGG 2 cut(s) 976, 1046
HgaI GACGC 1 cut(s) 1145
Hin1I GRCGYC 1 cut(s) 1137
Hin1II CATG 3 cut(s) 72, 685, 987
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 2 cut(s) 20, 827
HinfI GANTC 8 cut(s) 101, 266, 473, 791, 1069, 1094, 1175, 1193
HpaII CCGG 2 cut(s) 976, 1046
HphI GGTGA 3 cut(s) 481, 854, 959
Hpy166II GTNNAC 3 cut(s) 434, 643, 697
Hpy188I TCNGA 5 cut(s) 100, 460, 478, 960, 1065
Hpy188III TCNNGA 3 cut(s) 58, 784, 877
Hpy8I GTNNAC 3 cut(s) 434, 643, 697
Hpy99I CGWCG 1 cut(s) 1069
HpyAV CCTTC 7 cut(s) 55, 133, 147, 400, 496, 571, 976
HpyCH4III ACNGT 2 cut(s) 358, 497
HpyCH4V TGCA 4 cut(s) 77, 324, 341, 833
HpyF10VI GCNNNNNNNGC 5 cut(s) 74, 83, 177, 839, 1007
HpyF3I CTNAG 4 cut(s) 382, 457, 911, 994
Hsp92I GRCGYC 1 cut(s) 1137
Hsp92II CATG 3 cut(s) 72, 685, 987
KpnI GGTACC 1 cut(s) 982
Kzo9I GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
LmnI GCTCC 5 cut(s) 65, 411, 931, 992, 1046
Lsp1109I GCAGC 5 cut(s) 415, 822, 1010, 1026, 1061
LweI GCATC 1 cut(s) 311
MaeI CTAG 2 cut(s) 87, 621
MaeIII GTNAC 5 cut(s) 360, 410, 788, 860, 947
MalI GATC 6 cut(s) 56, 612, 875, 889, 1146, 1161
MboI GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
MboII GAAGA 7 cut(s) 235, 380, 583, 586, 740, 882, 1109
MflI RGATCY 2 cut(s) 610, 887
MhlI GDGCHC 2 cut(s) 936, 965
MlsI TGGCCA 1 cut(s) 301
MluCI AATT 6 cut(s) 114, 131, 230, 615, 869, 954
MluNI TGGCCA 1 cut(s) 301
MlyI GAGTC 4 cut(s) 110, 785, 1078, 1187
MmeI TCCRAC 4 cut(s) 10, 167, 1088, 1164
MnlI CCTC 7 cut(s) 150, 213, 447, 726, 913, 1071, 1177
Mox20I TGGCCA 1 cut(s) 301
MroXI GAANNNNTTC 1 cut(s) 510
MscI TGGCCA 1 cut(s) 301
MseI TTAA 3 cut(s) 347, 441, 600
MslI CAYNNNNRTG 1 cut(s) 945
Msp20I TGGCCA 1 cut(s) 301
MspA1I CMGCKG 2 cut(s) 281, 915
MspI CCGG 2 cut(s) 976, 1046
MspR9I CCNGG 7 cut(s) 39, 107, 395, 818, 896, 976, 1046
MvaI CCWGG 5 cut(s) 39, 107, 395, 818, 896
MwoI GCNNNNNNNGC 5 cut(s) 74, 83, 177, 839, 1007
NciI CCSGG 2 cut(s) 976, 1046
NdeI CATATG 1 cut(s) 92
NdeII GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
NheI GCTAGC 1 cut(s) 86
NlaIII CATG 3 cut(s) 72, 685, 987
NlaIV GGNNCC 1 cut(s) 980
NmuCI GTSAC 4 cut(s) 360, 788, 860, 947
NspI RCATGY 2 cut(s) 72, 685
PciI ACATGT 1 cut(s) 681
PdmI GAANNNNTTC 1 cut(s) 510
PfeI GAWTC 4 cut(s) 266, 473, 1094, 1175
PkrI GCNGC 6 cut(s) 405, 812, 917, 1000, 1016, 1051
PleI GAGTC 4 cut(s) 109, 785, 1077, 1187
PpsI GAGTC 4 cut(s) 109, 785, 1077, 1187
PscI ACATGT 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 936
Psp6I CCWGG 5 cut(s) 37, 105, 393, 816, 894
PspEI GGTNACC 2 cut(s) 860, 947
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 5 cut(s) 37, 105, 393, 816, 894
PspN4I GGNNCC 1 cut(s) 980
PspPI GGNCC 1 cut(s) 1126
PsuI RGATCY 2 cut(s) 610, 887
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 2 cut(s) 680, 980
RsaNI GTAC 2 cut(s) 679, 979
RseI CAYNNNNRTG 1 cut(s) 945
SacI GAGCTC 1 cut(s) 936
SaqAI TTAA 3 cut(s) 347, 441, 600
SatI GCNGC 6 cut(s) 404, 811, 916, 999, 1015, 1050
Sau3AI GATC 6 cut(s) 54, 610, 873, 887, 1144, 1159
Sau96I GGNCC 1 cut(s) 1126
SchI GAGTC 4 cut(s) 110, 785, 1078, 1187
ScrFI CCNGG 7 cut(s) 39, 107, 395, 818, 896, 976, 1046
SduI GDGCHC 2 cut(s) 936, 965
SfaNI GCATC 1 cut(s) 311
SfcI CTRYAG 1 cut(s) 1170
SinI GGWCC 1 cut(s) 1126
SmiMI CAYNNNNRTG 1 cut(s) 945
SmlI CTYRAG 1 cut(s) 586
SmoI CTYRAG 1 cut(s) 586
Sse9I AATT 6 cut(s) 114, 131, 230, 615, 869, 954
SsiI CCGC 1 cut(s) 915
SspMI CTAG 2 cut(s) 87, 621
SstI GAGCTC 1 cut(s) 936
StyD4I CCNGG 7 cut(s) 37, 105, 393, 816, 894, 974, 1044
StyI CCWWGG 3 cut(s) 708, 802, 856
TaaI ACNGT 2 cut(s) 358, 497
TaqI TCGA 2 cut(s) 794, 1158
TasI AATT 6 cut(s) 114, 131, 230, 615, 869, 954
TatI WGTACW 1 cut(s) 678
TauI GCSGC 1 cut(s) 918
TfiI GAWTC 4 cut(s) 266, 473, 1094, 1175
Tru1I TTAA 3 cut(s) 347, 441, 600
Tru9I TTAA 3 cut(s) 347, 441, 600
TseFI GTSAC 4 cut(s) 360, 788, 860, 947
TseI GCWGC 5 cut(s) 403, 810, 998, 1014, 1049
Tsp45I GTSAC 4 cut(s) 360, 788, 860, 947
TspDTI ATGAA 2 cut(s) 387, 541
TspGWI ACGGA 3 cut(s) 398, 944, 1186
VpaK11BI GGWCC 1 cut(s) 1126
XagI CCTNNNNNAGG 1 cut(s) 189
XapI RAATTY 1 cut(s) 114
XceI RCATGY 2 cut(s) 72, 685
XcmI CCANNNNNNNNNTGG 3 cut(s) 499, 873, 892
XmiI GTMKAC 1 cut(s) 696
XmnI GAANNNNTTC 1 cut(s) 510
XspI CTAG 2 cut(s) 87, 621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.