Rh7BG289100
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0014857
Physical Location & Seq
Forward (+)
27165661 .. 27181969
16309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG289100.1

Sequence Viewer

Length: 1134 bp
ATGCAAGTCGTCGGTGGGTCGGCCCTAACCACTACATCGCCTACGGTGCTTGGAGGGAGCCCGCGCCAGAGCCCAGGGTCACCCAAAATCGATCTGGACACCCAGATCTTCACTGGGTACTCGTACTCTCTAAATCTCAAATTCTCTCTCCGTGGTCGACAACCCCGCAGTGCCCTCGTCTCTGTCGGCGGCAACTCCCCCACGGAGCTCAACCATCTGAGTGACCCAATTCCAAGCACCTTCACATCCCGGTACCCATGCTCCATCTCAGCAGCTTCTCTTGCCAACAGCTTTGCTTTTCGGTATCAACTTCGCTCCCCGGCAGCACTTTCCCCTCCGACGAGTCCCCCCGACCTATTCACAGCAGATTCCAAAGTTTCAAAACTCAATCTTCCAAAGGACCAACCAGACGCCGTTGATCCAAGACCCATCGATCTGTCCTCTGTAGGTTCGCCGTTGGATTTTGACTCCGTTGAAAGTTGGTTAGCAATTTCGACTCCACCAGCTCTCAGTGTCGCTCCTCTTTCAACTATGTTTGCAGAGAATCCATTGAAAATAGCCGACGAAGCCAACAGAGATGGAATTGGTAGGCTATCTTTGGTTGCTGCATATGCAGCTCAATCATCTGCAACTGTGGTTCAGGCAGGCACAAAAGAACTCACCTTTAAGGAGGAGAAGGCCAAGGTCAAAGACTTGCACCTCGAGCTTCTAACTGGGATACTGATTATGCATGGTTATCAAGATGGGTGGAGAAATCAGGGTTGTAAAGAAGGATGGCCAGAGGAACTTCAATGCAATTGTACTTGGTTCTGGATACACCTGCAGATGGCACTAAACAATATTGTCAAGAAGATTTTGCAAAGCAGTGTAGTGGTGCTGCTTGCACTACATGGCAACATGGGTAGATTGATTATGCCCCGTTTTTTGGAGTCATCTAAAATTGCTCTTGATGGTGGAGGCAAAAATGGAGAGCCCAAACAGACCATTGGTTGTATGACAGAGCGTGTTGTGGAAACTCGATCATTTGGAATTGTTTTTCAGAATCAACTACACACTGTATACACAACCACAGTCTCCTTCATTTTCTTCAATTCGTCGCAATCAGGTGATTTAGTTCAGCTTTCGATAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009593 GO:0009653 GO:0009719 GO:0009720 GO:0009725 GO:0009726 GO:0009729 GO:0009733 GO:0009741 GO:0009742 GO:0009755 GO:0009825 GO:0009888 GO:0009965 GO:0009966 GO:0009968 GO:0009987 GO:0010015 GO:0010016 GO:0010033 GO:0010053 GO:0010054 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0046822 GO:0046824 GO:0046825 GO:0046827 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048523 GO:0048545 GO:0048583 GO:0048585 GO:0048731 GO:0048764 GO:0048765 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051222 GO:0051223 GO:0051606 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071695 GO:0071704 GO:0071944 GO:0090087 GO:0090316 GO:0090558 GO:0090627 GO:0099402 GO:0140096 GO:1900457 GO:1900458 GO:1901564 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904951 GO:1905392
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Pkinase

Protein Analysis

377

Amino Acids

40.79

Weight (kDa)

7.01

Isoelectric Point (pI)

48.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 828
Acc36I ACCTGC 1 cut(s) 828
Acc65I GGTACC 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 252
AccI GTMKAC 2 cut(s) 157, 1059
AccII CGCG 1 cut(s) 64
AciI CCGC 3 cut(s) 62, 166, 189
AclWI GGATC 1 cut(s) 413
AcoI YGGCCR 1 cut(s) 776
AcsI RAATTY 1 cut(s) 140
AcyI GRCGYC 1 cut(s) 411
AfaI GTAC 4 cut(s) 119, 125, 254, 802
AfiI CCNNNNNNNGG 2 cut(s) 826, 925
AgsI TTSAA 6 cut(s) 381, 476, 528, 553, 791, 1090
AjnI CCWGG 1 cut(s) 73
AluBI AGCT 7 cut(s) 208, 275, 291, 506, 617, 706, 1120
AluI AGCT 7 cut(s) 208, 275, 291, 506, 617, 706, 1120
Alw21I GWGCWC 1 cut(s) 210
Alw26I GTCTC 2 cut(s) 184, 1078
AlwI GGATC 1 cut(s) 413
Ama87I CYCGRG 1 cut(s) 701
AoxI GGCC 3 cut(s) 21, 678, 776
ApeKI GCWGC 5 cut(s) 272, 323, 605, 614, 877
ApoI RAATTY 1 cut(s) 140
Asp718I GGTACC 1 cut(s) 252
AspLEI GCGC 1 cut(s) 66
AspS9I GGNCC 2 cut(s) 22, 400
AsuC2I CCSGG 2 cut(s) 250, 320
AsuHPI GGTGA 3 cut(s) 72, 652, 1118
AvaI CYCGRG 1 cut(s) 701
AvaII GGWCC 1 cut(s) 400
BaeGI GKGCMC 1 cut(s) 175
BalI TGGCCA 1 cut(s) 778
BanI GGYRCC 1 cut(s) 252
BanII GRGCYC 4 cut(s) 62, 74, 210, 975
Bbv12I GWGCWC 1 cut(s) 210
BbvI GCAGC 5 cut(s) 284, 335, 592, 626, 864
BccI CCATC 8 cut(s) 222, 272, 437, 572, 737, 768, 820, 944
BceAI ACGGC 2 cut(s) 398, 439
BcgI CGANNNNNNTGC 2 cut(s) 157, 191
BciT130I CCWGG 1 cut(s) 75
BciVI GTATCC 2 cut(s) 711, 807
BcnI CCSGG 2 cut(s) 250, 320
BcoDI GTCTC 2 cut(s) 184, 1078
BfaI CTAG 1 cut(s) 1132
BfmI CTRYAG 2 cut(s) 444, 821
BfuAI ACCTGC 1 cut(s) 828
BfuI GTATCC 2 cut(s) 711, 807
BglII AGATCT 1 cut(s) 105
BisI GCNGC 6 cut(s) 190, 273, 324, 606, 615, 878
BlsI GCNGC 6 cut(s) 191, 274, 325, 607, 616, 879
Bme1390I CCNGG 3 cut(s) 75, 250, 320
Bme18I GGWCC 1 cut(s) 400
BmeT110I CYCGRG 1 cut(s) 701
BmgT120I GGNCC 2 cut(s) 22, 400
BmiI GGNNCC 2 cut(s) 59, 254
BmrFI CCNGG 3 cut(s) 75, 250, 320
BmrI ACTGGG 2 cut(s) 123, 723
BmuI ACTGGG 2 cut(s) 123, 723
BpuMI CCSGG 2 cut(s) 250, 320
Bsa29I ATCGAT 2 cut(s) 90, 432
BsaHI GRCGYC 1 cut(s) 411
BsaJI CCNNGG 6 cut(s) 73, 74, 151, 201, 318, 681
BsaXI ACNNNNNCTCC 2 cut(s) 245, 275
Bsc4I CCNNNNNNNGG 2 cut(s) 826, 925
Bse1I ACTGG 2 cut(s) 118, 718
BseBI CCWGG 1 cut(s) 75
BseCI ATCGAT 2 cut(s) 90, 432
BseDI CCNNGG 6 cut(s) 73, 74, 151, 201, 318, 681
BseGI GGATG 2 cut(s) 245, 779
BseLI CCNNNNNNNGG 2 cut(s) 826, 925
BseMII CTCAG 3 cut(s) 209, 282, 523
BseNI ACTGG 2 cut(s) 118, 718
BseRI GAGGAG 2 cut(s) 510, 686
BseSI GKGCMC 1 cut(s) 175
BseXI GCAGC 5 cut(s) 284, 335, 592, 626, 864
Bsh1236I CGCG 1 cut(s) 64
BshFI GGCC 3 cut(s) 23, 680, 778
BshNI GGYRCC 1 cut(s) 252
BshVI ATCGAT 2 cut(s) 90, 432
BsiHKAI GWGCWC 1 cut(s) 210
BsiHKCI CYCGRG 1 cut(s) 701
BsiSI CCGG 2 cut(s) 250, 320
BslFI GGGAC 1 cut(s) 330
BslI CCNNNNNNNGG 2 cut(s) 826, 925
BsmAI GTCTC 2 cut(s) 184, 1078
BsmBI CGTCTC 1 cut(s) 184
BsmFI GGGAC 1 cut(s) 330
BsnI GGCC 3 cut(s) 23, 680, 778
BsoBI CYCGRG 1 cut(s) 701
Bsp1286I GDGCHC 5 cut(s) 62, 74, 175, 210, 975
Bsp143I GATC 5 cut(s) 91, 105, 418, 433, 1019
BspACI CCGC 3 cut(s) 62, 166, 189
BspANI GGCC 3 cut(s) 23, 680, 778
BspCNI CTCAG 3 cut(s) 210, 281, 522
BspDI ATCGAT 2 cut(s) 90, 432
BspFNI CGCG 1 cut(s) 64
BspLI GGNNCC 2 cut(s) 59, 254
BspMAI CTGCAG 1 cut(s) 825
BspMI ACCTGC 1 cut(s) 828
BspPI GGATC 1 cut(s) 413
BspT107I GGYRCC 1 cut(s) 252
BsrI ACTGG 2 cut(s) 118, 718
BssECI CCNNGG 6 cut(s) 73, 74, 151, 201, 318, 681
BssMI GATC 5 cut(s) 91, 105, 418, 433, 1019
BssNAI GTATAC 1 cut(s) 1060
BssNI GRCGYC 1 cut(s) 411
BssT1I CCWWGG 1 cut(s) 681
Bst1107I GTATAC 1 cut(s) 1060
Bst2UI CCWGG 1 cut(s) 75
Bst4CI ACNGT 4 cut(s) 46, 634, 1057, 1072
BstACI GRCGYC 1 cut(s) 411
BstC8I GCNNGC 3 cut(s) 62, 646, 882
BstDEI CTNAG 3 cut(s) 218, 268, 509
BstDSI CCRYGG 2 cut(s) 151, 201
BstEII GGTNACC 1 cut(s) 78
BstF5I GGATG 2 cut(s) 245, 779
BstFNI CGCG 1 cut(s) 64
BstHHI GCGC 1 cut(s) 66
BstKTI GATC 5 cut(s) 94, 108, 421, 436, 1022
BstMAI GTCTC 2 cut(s) 184, 1078
BstMBI GATC 5 cut(s) 91, 105, 418, 433, 1019
BstMWI GCNNNNNNNGC 6 cut(s) 46, 281, 566, 611, 614, 703
BstNI CCWGG 1 cut(s) 75
BstPI GGTNACC 1 cut(s) 78
BstSCI CCNGG 3 cut(s) 73, 248, 318
BstSFI CTRYAG 2 cut(s) 444, 821
BstSLI GKGCMC 1 cut(s) 175
BstUI CGCG 1 cut(s) 64
BstV1I GCAGC 5 cut(s) 284, 335, 592, 626, 864
BstX2I RGATCY 1 cut(s) 105
BstYI RGATCY 1 cut(s) 105
BstZ17I GTATAC 1 cut(s) 1060
Bsu15I ATCGAT 2 cut(s) 90, 432
BsuI GTATCC 2 cut(s) 711, 807
BsuRI GGCC 3 cut(s) 23, 680, 778
BsuTUI ATCGAT 2 cut(s) 90, 432
BtgI CCRYGG 2 cut(s) 151, 201
BtgZI GCGATG 1 cut(s) 21
BtsCI GGATG 2 cut(s) 245, 779
BtsI GCAGTG 2 cut(s) 175, 871
BtsIMutI CAGTG 5 cut(s) 111, 175, 517, 871, 1053
BveI ACCTGC 1 cut(s) 828
Cac8I GCNNGC 3 cut(s) 62, 646, 882
CfoI GCGC 1 cut(s) 66
Cfr13I GGNCC 2 cut(s) 22, 400
ClaI ATCGAT 2 cut(s) 90, 432
CseI GACGC 1 cut(s) 419
Csp6I GTAC 4 cut(s) 118, 124, 253, 801
CspCI CAANNNNNGTGG 2 cut(s) 728, 763
CviAII CATG 4 cut(s) 258, 731, 890, 898
CviQI GTAC 4 cut(s) 118, 124, 253, 801
DdeI CTNAG 3 cut(s) 218, 268, 509
DpnI GATC 5 cut(s) 93, 107, 420, 435, 1021
DpnII GATC 5 cut(s) 91, 105, 418, 433, 1019
EaeI YGGCCR 1 cut(s) 776
Ecl136II GAGCTC 1 cut(s) 208
Eco130I CCWWGG 1 cut(s) 681
Eco24I GRGCYC 4 cut(s) 62, 74, 210, 975
Eco47I GGWCC 1 cut(s) 400
Eco53kI GAGCTC 1 cut(s) 208
Eco88I CYCGRG 1 cut(s) 701
Eco91I GGTNACC 1 cut(s) 78
EcoICRI GAGCTC 1 cut(s) 208
EcoO65I GGTNACC 1 cut(s) 78
EcoRII CCWGG 1 cut(s) 73
EcoT14I CCWWGG 1 cut(s) 681
EcoT22I ATGCAT 1 cut(s) 732
EcoT38I GRGCYC 4 cut(s) 62, 74, 210, 975
ErhI CCWWGG 1 cut(s) 681
Esp3I CGTCTC 1 cut(s) 184
FaeI CATG 4 cut(s) 261, 734, 893, 901
FaqI GGGAC 1 cut(s) 330
FatI CATG 4 cut(s) 257, 730, 889, 897
FauI CCCGC 2 cut(s) 69, 173
FauNDI CATATG 1 cut(s) 610
FblI GTMKAC 2 cut(s) 157, 1059
Fnu4HI GCNGC 6 cut(s) 190, 273, 324, 606, 615, 878
FokI GGATG 2 cut(s) 232, 786
FriOI GRGCYC 4 cut(s) 62, 74, 210, 975
Fsp4HI GCNGC 6 cut(s) 190, 273, 324, 606, 615, 878
FspBI CTAG 1 cut(s) 1132
GlaI GCGC 1 cut(s) 65
GluI GCNGC 6 cut(s) 190, 273, 324, 606, 615, 878
HaeIII GGCC 3 cut(s) 23, 680, 778
HapII CCGG 2 cut(s) 250, 320
HgaI GACGC 1 cut(s) 419
HhaI GCGC 1 cut(s) 66
Hin1I GRCGYC 1 cut(s) 411
Hin1II CATG 4 cut(s) 261, 734, 893, 901
Hin6I GCGC 1 cut(s) 64
HinP1I GCGC 1 cut(s) 64
HincII GTYRAC 1 cut(s) 158
HindII GTYRAC 1 cut(s) 158
HinfI GANTC 7 cut(s) 343, 368, 467, 496, 544, 929, 1042
HpaII CCGG 2 cut(s) 250, 320
HphI GGTGA 3 cut(s) 72, 652, 1118
Hpy166II GTNNAC 2 cut(s) 158, 1060
Hpy188I TCNGA 3 cut(s) 219, 339, 1041
Hpy188III TCNNGA 5 cut(s) 95, 740, 811, 847, 947
Hpy8I GTNNAC 2 cut(s) 158, 1060
Hpy99I CGWCG 4 cut(s) 14, 343, 566, 1099
HpyAV CCTTC 4 cut(s) 250, 670, 764, 1087
HpyCH4III ACNGT 4 cut(s) 46, 634, 1057, 1072
HpyF10VI GCNNNNNNNGC 6 cut(s) 46, 281, 566, 611, 614, 703
HpyF3I CTNAG 3 cut(s) 218, 268, 509
Hsp92I GRCGYC 1 cut(s) 411
Hsp92II CATG 4 cut(s) 261, 734, 893, 901
HspAI GCGC 1 cut(s) 64
KpnI GGTACC 1 cut(s) 256
Kzo9I GATC 5 cut(s) 91, 105, 418, 433, 1019
LmnI GCTCC 5 cut(s) 57, 205, 266, 320, 523
Lsp1109I GCAGC 5 cut(s) 284, 335, 592, 626, 864
MaeI CTAG 1 cut(s) 1132
MaeIII GTNAC 2 cut(s) 78, 221
MalI GATC 5 cut(s) 93, 107, 420, 435, 1021
MboI GATC 5 cut(s) 91, 105, 418, 433, 1019
MboII GAAGA 4 cut(s) 100, 383, 862, 1078
MfeI CAATTG 1 cut(s) 796
MflI RGATCY 1 cut(s) 105
MhlI GDGCHC 5 cut(s) 62, 74, 175, 210, 975
MlsI TGGCCA 1 cut(s) 778
MluCI AATT 8 cut(s) 140, 228, 489, 582, 796, 939, 1029, 1090
MluNI TGGCCA 1 cut(s) 778
MlyI GAGTC 4 cut(s) 352, 461, 490, 938
MmeI TCCRAC 2 cut(s) 362, 438
MnlI CCTC 9 cut(s) 47, 185, 345, 451, 531, 664, 710, 775, 950
Mox20I TGGCCA 1 cut(s) 778
Mph1103I ATGCAT 1 cut(s) 732
MscI TGGCCA 1 cut(s) 778
MseI TTAA 1 cut(s) 666
MslI CAYNNNNRTG 1 cut(s) 219
Msp20I TGGCCA 1 cut(s) 778
MspI CCGG 2 cut(s) 250, 320
MspR9I CCNGG 3 cut(s) 75, 250, 320
MunI CAATTG 1 cut(s) 796
MvaI CCWGG 1 cut(s) 75
MvnI CGCG 1 cut(s) 64
MwoI GCNNNNNNNGC 6 cut(s) 46, 281, 566, 611, 614, 703
NciI CCSGG 2 cut(s) 250, 320
NdeI CATATG 1 cut(s) 610
NdeII GATC 5 cut(s) 91, 105, 418, 433, 1019
NlaIII CATG 4 cut(s) 261, 734, 893, 901
NlaIV GGNNCC 2 cut(s) 59, 254
NmuCI GTSAC 2 cut(s) 78, 221
NsiI ATGCAT 1 cut(s) 732
PaeR7I CTCGAG 1 cut(s) 701
PaqCI CACCTGC 1 cut(s) 828
PasI CCCWGGG 1 cut(s) 74
PfeI GAWTC 3 cut(s) 368, 544, 1042
PkrI GCNGC 6 cut(s) 191, 274, 325, 607, 616, 879
PleI GAGTC 4 cut(s) 351, 461, 490, 937
PpsI GAGTC 4 cut(s) 351, 461, 490, 937
Psp124BI GAGCTC 1 cut(s) 210
Psp6I CCWGG 1 cut(s) 73
PspEI GGTNACC 1 cut(s) 78
PspGI CCWGG 1 cut(s) 73
PspN4I GGNNCC 2 cut(s) 59, 254
PspPI GGNCC 2 cut(s) 22, 400
PspXI VCTCGAGB 1 cut(s) 701
PstI CTGCAG 1 cut(s) 825
PsuI RGATCY 1 cut(s) 105
RsaI GTAC 4 cut(s) 119, 125, 254, 802
RsaNI GTAC 4 cut(s) 118, 124, 253, 801
RseI CAYNNNNRTG 1 cut(s) 219
SacI GAGCTC 1 cut(s) 210
SalI GTCGAC 1 cut(s) 156
SaqAI TTAA 1 cut(s) 666
SatI GCNGC 6 cut(s) 190, 273, 324, 606, 615, 878
Sau3AI GATC 5 cut(s) 91, 105, 418, 433, 1019
Sau96I GGNCC 2 cut(s) 22, 400
SchI GAGTC 4 cut(s) 352, 461, 490, 938
ScrFI CCNGG 3 cut(s) 75, 250, 320
SduI GDGCHC 5 cut(s) 62, 74, 175, 210, 975
SfcI CTRYAG 2 cut(s) 444, 821
Sfr274I CTCGAG 1 cut(s) 701
SinI GGWCC 1 cut(s) 400
SlaI CTCGAG 1 cut(s) 701
SmiMI CAYNNNNRTG 1 cut(s) 219
SmlI CTYRAG 1 cut(s) 701
SmoI CTYRAG 1 cut(s) 701
Sse9I AATT 8 cut(s) 140, 228, 489, 582, 796, 939, 1029, 1090
SsiI CCGC 3 cut(s) 62, 166, 189
SspI AATATT 1 cut(s) 841
SspMI CTAG 1 cut(s) 1132
SstI GAGCTC 1 cut(s) 210
StyD4I CCNGG 3 cut(s) 73, 248, 318
StyI CCWWGG 1 cut(s) 681
TaaI ACNGT 4 cut(s) 46, 634, 1057, 1072
TaqI TCGA 7 cut(s) 90, 157, 432, 494, 702, 1018, 1124
TasI AATT 8 cut(s) 140, 228, 489, 582, 796, 939, 1029, 1090
TatI WGTACW 1 cut(s) 800
TauI GCSGC 1 cut(s) 192
TfiI GAWTC 3 cut(s) 368, 544, 1042
Tru1I TTAA 1 cut(s) 666
Tru9I TTAA 1 cut(s) 666
TscAI CASTG 5 cut(s) 118, 175, 517, 871, 1060
TseFI GTSAC 2 cut(s) 78, 221
TseI GCWGC 5 cut(s) 272, 323, 605, 614, 877
Tsp45I GTSAC 2 cut(s) 78, 221
TspDTI ATGAA 1 cut(s) 1069
TspGWI ACGGA 3 cut(s) 140, 218, 460
TspRI CASTG 5 cut(s) 118, 175, 517, 871, 1060
VpaK11BI GGWCC 1 cut(s) 400
XapI RAATTY 1 cut(s) 140
XcmI CCANNNNNNNNNTGG 2 cut(s) 91, 110
XhoI CTCGAG 1 cut(s) 701
XmiI GTMKAC 2 cut(s) 157, 1059
XspI CTAG 1 cut(s) 1132
Zsp2I ATGCAT 1 cut(s) 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.