prolyl 4-hydroxylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G28480 AT3G28480 AT3G28490 |
| fragaria_vesca | FvH4_6g49620 FvH4_6g49620 FvH4_6g49620 |
| malus_domestica | MD09G1043000.v1.1 MD17G1044500.v1.1 |
| prunus_persica | Prupe.3G274700_v2.0.a1 |
| pyrus_communis | pycom111g03360 pycom17g03920 |
| rosa_chinensis | RchiOBHm_Chr2g0169661 |
| rosa_laevigata | RLG00000021892 |
| rosa_multiflora | Rmu_co8239437.1_g000001 Rmu_sc0013280.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00081910 |
| rosa_rugosa | Rorug02G0541900 |
| rosa_samantha | Rh2AG614200 Rh2BG626400 Rh2CG595700 Rh2DG637300 |
| rosa_wichuraiana | Rw2G050910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 294 |
| AarI | CACCTGC | 1 cut(s) | 667 |
| Acc16I | TGCGCA | 1 cut(s) | 675 |
| Acc36I | ACCTGC | 1 cut(s) | 667 |
| AccI | GTMKAC | 1 cut(s) | 981 |
| AccII | CGCG | 1 cut(s) | 255 |
| AccIII | TCCGGA | 1 cut(s) | 419 |
| AciI | CCGC | 3 cut(s) | 409, 852, 909 |
| AclWI | GGATC | 8 cut(s) | 94, 195, 208, 239, 794, 870, 930, 1008 |
| AcoI | YGGCCR | 2 cut(s) | 339, 601 |
| AcsI | RAATTY | 3 cut(s) | 127, 155, 298 |
| AcuI | CTGAAG | 1 cut(s) | 757 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 752 |
| AgsI | TTSAA | 5 cut(s) | 155, 644, 692, 751, 891 |
| AjiI | CACGTC | 2 cut(s) | 67, 97 |
| AjnI | CCWGG | 1 cut(s) | 278 |
| AluBI | AGCT | 7 cut(s) | 83, 265, 352, 417, 440, 584, 822 |
| AluI | AGCT | 7 cut(s) | 83, 265, 352, 417, 440, 584, 822 |
| Alw21I | GWGCWC | 2 cut(s) | 85, 419 |
| Alw26I | GTCTC | 3 cut(s) | 73, 255, 262 |
| AlwI | GGATC | 8 cut(s) | 94, 195, 208, 239, 794, 870, 930, 1008 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 526 |
| Ama87I | CYCGRG | 1 cut(s) | 1007 |
| Aor13HI | TCCGGA | 1 cut(s) | 419 |
| AoxI | GGCC | 2 cut(s) | 339, 601 |
| ApeKI | GCWGC | 2 cut(s) | 479, 822 |
| ApoI | RAATTY | 3 cut(s) | 127, 155, 298 |
| AseI | ATTAAT | 1 cut(s) | 333 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 746 |
| AspLEI | GCGC | 1 cut(s) | 676 |
| AspS9I | GGNCC | 3 cut(s) | 224, 486, 849 |
| AsuC2I | CCSGG | 2 cut(s) | 1008, 1009 |
| AsuHPI | GGTGA | 4 cut(s) | 691, 767, 851, 971 |
| AsuII | TTCGAA | 2 cut(s) | 434, 882 |
| AvaI | CYCGRG | 1 cut(s) | 1007 |
| AvaII | GGWCC | 3 cut(s) | 224, 486, 849 |
| BalI | TGGCCA | 2 cut(s) | 341, 603 |
| BamHI | GGATCC | 1 cut(s) | 200 |
| BanII | GRGCYC | 2 cut(s) | 85, 419 |
| BbsI | GAAGAC | 1 cut(s) | 770 |
| Bbv12I | GWGCWC | 2 cut(s) | 85, 419 |
| BbvI | GCAGC | 2 cut(s) | 466, 809 |
| BccI | CCATC | 1 cut(s) | 163 |
| BciT130I | CCWGG | 1 cut(s) | 280 |
| BclI | TGATCA | 2 cut(s) | 207, 322 |
| BcnI | CCSGG | 2 cut(s) | 1008, 1009 |
| BcoDI | GTCTC | 3 cut(s) | 73, 255, 262 |
| BfaI | CTAG | 2 cut(s) | 353, 906 |
| BfuAI | ACCTGC | 1 cut(s) | 667 |
| BisI | GCNGC | 2 cut(s) | 480, 823 |
| BlsI | GCNGC | 2 cut(s) | 481, 824 |
| Bme1390I | CCNGG | 3 cut(s) | 280, 1008, 1009 |
| Bme18I | GGWCC | 3 cut(s) | 224, 486, 849 |
| BmeT110I | CYCGRG | 1 cut(s) | 1007 |
| BmgBI | CACGTC | 2 cut(s) | 67, 97 |
| BmgT120I | GGNCC | 3 cut(s) | 224, 486, 849 |
| BmiI | GGNNCC | 1 cut(s) | 202 |
| BmrFI | CCNGG | 3 cut(s) | 280, 1008, 1009 |
| BmsI | GCATC | 1 cut(s) | 748 |
| BpiI | GAAGAC | 1 cut(s) | 770 |
| Bpu14I | TTCGAA | 2 cut(s) | 434, 882 |
| BpuEI | CTTGAG | 1 cut(s) | 426 |
| BpuMI | CCSGG | 2 cut(s) | 1008, 1009 |
| BsaJI | CCNNGG | 5 cut(s) | 278, 279, 363, 696, 1007 |
| BsaWI | WCCGGW | 1 cut(s) | 419 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 752 |
| Bse118I | RCCGGY | 1 cut(s) | 956 |
| Bse3DI | GCAATG | 1 cut(s) | 522 |
| BseAI | TCCGGA | 1 cut(s) | 419 |
| BseBI | CCWGG | 1 cut(s) | 280 |
| BseDI | CCNNGG | 5 cut(s) | 278, 279, 363, 696, 1007 |
| BseGI | GGATG | 2 cut(s) | 10, 706 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 752 |
| BseMI | GCAATG | 1 cut(s) | 522 |
| BseMII | CTCAG | 3 cut(s) | 105, 275, 300 |
| BseRI | GAGGAG | 2 cut(s) | 326, 329 |
| BseXI | GCAGC | 2 cut(s) | 466, 809 |
| BsgI | GTGCAG | 1 cut(s) | 512 |
| Bsh1236I | CGCG | 1 cut(s) | 255 |
| BshFI | GGCC | 2 cut(s) | 341, 603 |
| BsiHKAI | GWGCWC | 2 cut(s) | 85, 419 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1007 |
| BsiSI | CCGG | 3 cut(s) | 420, 957, 1008 |
| BslFI | GGGAC | 1 cut(s) | 261 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 752 |
| BsmAI | GTCTC | 3 cut(s) | 73, 255, 262 |
| BsmBI | CGTCTC | 3 cut(s) | 73, 255, 262 |
| BsmFI | GGGAC | 1 cut(s) | 261 |
| BsmI | GAATGC | 1 cut(s) | 934 |
| BsnI | GGCC | 2 cut(s) | 341, 603 |
| BsoBI | CYCGRG | 1 cut(s) | 1007 |
| Bsp119I | TTCGAA | 2 cut(s) | 434, 882 |
| Bsp1286I | GDGCHC | 2 cut(s) | 85, 419 |
| Bsp13I | TCCGGA | 1 cut(s) | 419 |
| Bsp143I | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| Bsp19I | CCATGG | 1 cut(s) | 363 |
| BspACI | CCGC | 3 cut(s) | 409, 852, 909 |
| BspANI | GGCC | 2 cut(s) | 341, 603 |
| BspCNI | CTCAG | 3 cut(s) | 104, 274, 301 |
| BspEI | TCCGGA | 1 cut(s) | 419 |
| BspFNI | CGCG | 1 cut(s) | 255 |
| BspHI | TCATGA | 1 cut(s) | 574 |
| BspLI | GGNNCC | 1 cut(s) | 202 |
| BspMI | ACCTGC | 1 cut(s) | 667 |
| BspPI | GGATC | 8 cut(s) | 94, 195, 208, 239, 794, 870, 930, 1008 |
| BspT104I | TTCGAA | 2 cut(s) | 434, 882 |
| BsrDI | GCAATG | 1 cut(s) | 522 |
| BsrFI | RCCGGY | 1 cut(s) | 956 |
| BssAI | RCCGGY | 1 cut(s) | 956 |
| BssECI | CCNNGG | 5 cut(s) | 278, 279, 363, 696, 1007 |
| BssMI | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| BssNAI | GTATAC | 1 cut(s) | 982 |
| BssT1I | CCWWGG | 2 cut(s) | 363, 696 |
| Bst1107I | GTATAC | 1 cut(s) | 982 |
| Bst2UI | CCWGG | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 5 cut(s) | 608, 619, 661, 688, 809 |
| Bst6I | CTCTTC | 3 cut(s) | 56, 212, 1016 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 526 |
| BstBI | TTCGAA | 2 cut(s) | 434, 882 |
| BstC8I | GCNNGC | 1 cut(s) | 10 |
| BstDEI | CTNAG | 4 cut(s) | 91, 261, 309, 1044 |
| BstDSI | CCRYGG | 1 cut(s) | 363 |
| BstF5I | GGATG | 2 cut(s) | 10, 706 |
| BstFNI | CGCG | 1 cut(s) | 255 |
| BstHHI | GCGC | 1 cut(s) | 676 |
| BstKTI | GATC | 9 cut(s) | 102, 203, 210, 247, 325, 802, 878, 925, 1003 |
| BstMAI | GTCTC | 3 cut(s) | 73, 255, 262 |
| BstMBI | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 526, 915 |
| BstNI | CCWGG | 1 cut(s) | 280 |
| BstSCI | CCNGG | 3 cut(s) | 278, 1006, 1007 |
| BstUI | CGCG | 1 cut(s) | 255 |
| BstV1I | GCAGC | 2 cut(s) | 466, 809 |
| BstV2I | GAAGAC | 1 cut(s) | 770 |
| BstX2I | RGATCY | 3 cut(s) | 200, 875, 1000 |
| BstYI | RGATCY | 3 cut(s) | 200, 875, 1000 |
| BstZ17I | GTATAC | 1 cut(s) | 982 |
| BsuRI | GGCC | 2 cut(s) | 341, 603 |
| BtgI | CCRYGG | 1 cut(s) | 363 |
| BtrI | CACGTC | 2 cut(s) | 67, 97 |
| BtsCI | GGATG | 2 cut(s) | 10, 706 |
| BtsI | GCAGTG | 1 cut(s) | 199 |
| BtsIMutI | CAGTG | 2 cut(s) | 199, 615 |
| BveI | ACCTGC | 1 cut(s) | 667 |
| Cac8I | GCNNGC | 1 cut(s) | 10 |
| CaiI | CAGNNNCTG | 1 cut(s) | 526 |
| CciI | TCATGA | 1 cut(s) | 574 |
| CfoI | GCGC | 1 cut(s) | 676 |
| Cfr10I | RCCGGY | 1 cut(s) | 956 |
| Cfr13I | GGNCC | 3 cut(s) | 224, 486, 849 |
| Cfr9I | CCCGGG | 1 cut(s) | 1007 |
| CseI | GACGC | 1 cut(s) | 244 |
| CviAII | CATG | 9 cut(s) | 132, 364, 483, 575, 671, 815, 869, 945, 985 |
| DdeI | CTNAG | 4 cut(s) | 91, 261, 309, 1044 |
| DpnI | GATC | 9 cut(s) | 101, 202, 209, 246, 324, 801, 877, 924, 1002 |
| DpnII | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| DraI | TTTAAA | 1 cut(s) | 147 |
| EaeI | YGGCCR | 2 cut(s) | 339, 601 |
| Eam1104I | CTCTTC | 3 cut(s) | 56, 212, 1016 |
| EarI | CTCTTC | 3 cut(s) | 56, 212, 1016 |
| Ecl136II | GAGCTC | 2 cut(s) | 83, 417 |
| Eco130I | CCWWGG | 2 cut(s) | 363, 696 |
| Eco24I | GRGCYC | 2 cut(s) | 85, 419 |
| Eco47I | GGWCC | 3 cut(s) | 224, 486, 849 |
| Eco53kI | GAGCTC | 2 cut(s) | 83, 417 |
| Eco57I | CTGAAG | 1 cut(s) | 757 |
| Eco88I | CYCGRG | 1 cut(s) | 1007 |
| EcoICRI | GAGCTC | 2 cut(s) | 83, 417 |
| EcoO109I | RGGNCCY | 1 cut(s) | 224 |
| EcoRII | CCWGG | 1 cut(s) | 278 |
| EcoT14I | CCWWGG | 2 cut(s) | 363, 696 |
| EcoT38I | GRGCYC | 2 cut(s) | 85, 419 |
| ErhI | CCWWGG | 2 cut(s) | 363, 696 |
| Esp3I | CGTCTC | 3 cut(s) | 73, 255, 262 |
| FaeI | CATG | 9 cut(s) | 135, 367, 486, 578, 674, 818, 872, 948, 988 |
| FaqI | GGGAC | 1 cut(s) | 261 |
| FatI | CATG | 9 cut(s) | 131, 363, 482, 574, 670, 814, 868, 944, 984 |
| FauI | CCCGC | 1 cut(s) | 902 |
| FbaI | TGATCA | 2 cut(s) | 207, 322 |
| FblI | GTMKAC | 1 cut(s) | 981 |
| Fnu4HI | GCNGC | 2 cut(s) | 480, 823 |
| FokI | GGATG | 2 cut(s) | 17, 713 |
| FriOI | GRGCYC | 2 cut(s) | 85, 419 |
| Fsp4HI | GCNGC | 2 cut(s) | 480, 823 |
| FspBI | CTAG | 2 cut(s) | 353, 906 |
| FspI | TGCGCA | 1 cut(s) | 675 |
| GlaI | GCGC | 1 cut(s) | 675 |
| GluI | GCNGC | 2 cut(s) | 480, 823 |
| HaeIII | GGCC | 2 cut(s) | 341, 603 |
| HapII | CCGG | 3 cut(s) | 420, 957, 1008 |
| HgaI | GACGC | 1 cut(s) | 244 |
| HhaI | GCGC | 1 cut(s) | 676 |
| Hin1II | CATG | 9 cut(s) | 135, 367, 486, 578, 674, 818, 872, 948, 988 |
| Hin6I | GCGC | 1 cut(s) | 674 |
| HinP1I | GCGC | 1 cut(s) | 674 |
| HinfI | GANTC | 7 cut(s) | 87, 274, 380, 467, 865, 887, 973 |
| HpaII | CCGG | 3 cut(s) | 420, 957, 1008 |
| HphI | GGTGA | 4 cut(s) | 691, 767, 851, 971 |
| Hpy166II | GTNNAC | 1 cut(s) | 982 |
| Hpy188I | TCNGA | 6 cut(s) | 94, 212, 310, 715, 927, 997 |
| Hpy188III | TCNNGA | 6 cut(s) | 78, 152, 420, 443, 575, 590 |
| Hpy8I | GTNNAC | 1 cut(s) | 982 |
| HpyAV | CCTTC | 4 cut(s) | 237, 499, 503, 889 |
| HpyCH4III | ACNGT | 5 cut(s) | 608, 619, 661, 688, 809 |
| HpyCH4IV | ACGT | 3 cut(s) | 66, 96, 116 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 526, 915 |
| HpyF3I | CTNAG | 4 cut(s) | 91, 261, 309, 1044 |
| HpySE526I | ACGT | 3 cut(s) | 66, 96, 116 |
| Hsp92II | CATG | 9 cut(s) | 135, 367, 486, 578, 674, 818, 872, 948, 988 |
| HspAI | GCGC | 1 cut(s) | 674 |
| Kpn2I | TCCGGA | 1 cut(s) | 419 |
| Ksp22I | TGATCA | 2 cut(s) | 207, 322 |
| Kzo9I | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| LmnI | GCTCC | 2 cut(s) | 422, 819 |
| Lsp1109I | GCAGC | 2 cut(s) | 466, 809 |
| LweI | GCATC | 1 cut(s) | 748 |
| MaeI | CTAG | 2 cut(s) | 353, 906 |
| MaeII | ACGT | 3 cut(s) | 66, 96, 116 |
| MalI | GATC | 9 cut(s) | 101, 202, 209, 246, 324, 801, 877, 924, 1002 |
| MboI | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| MfeI | CAATTG | 1 cut(s) | 498 |
| MflI | RGATCY | 3 cut(s) | 200, 875, 1000 |
| MhlI | GDGCHC | 2 cut(s) | 85, 419 |
| MlsI | TGGCCA | 2 cut(s) | 341, 603 |
| MluCI | AATT | 7 cut(s) | 127, 155, 163, 298, 330, 498, 593 |
| MluNI | TGGCCA | 2 cut(s) | 341, 603 |
| MlyI | GAGTC | 3 cut(s) | 283, 374, 476 |
| MmeI | TCCRAC | 1 cut(s) | 483 |
| Mox20I | TGGCCA | 2 cut(s) | 341, 603 |
| MroI | TCCGGA | 1 cut(s) | 419 |
| MroXI | GAANNNNTTC | 1 cut(s) | 746 |
| MscI | TGGCCA | 2 cut(s) | 341, 603 |
| MseI | TTAA | 3 cut(s) | 146, 159, 333 |
| Msp20I | TGGCCA | 2 cut(s) | 341, 603 |
| MspI | CCGG | 3 cut(s) | 420, 957, 1008 |
| MspR9I | CCNGG | 3 cut(s) | 280, 1008, 1009 |
| MunI | CAATTG | 1 cut(s) | 498 |
| Mva1269I | GAATGC | 1 cut(s) | 934 |
| MvaI | CCWGG | 1 cut(s) | 280 |
| MvnI | CGCG | 1 cut(s) | 255 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 526, 915 |
| NciI | CCSGG | 2 cut(s) | 1008, 1009 |
| NcoI | CCATGG | 1 cut(s) | 363 |
| NdeII | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| NlaIII | CATG | 9 cut(s) | 135, 367, 486, 578, 674, 818, 872, 948, 988 |
| NlaIV | GGNNCC | 1 cut(s) | 202 |
| NsbI | TGCGCA | 1 cut(s) | 675 |
| NspV | TTCGAA | 2 cut(s) | 434, 882 |
| PagI | TCATGA | 1 cut(s) | 574 |
| PaqCI | CACCTGC | 1 cut(s) | 667 |
| PasI | CCCWGGG | 1 cut(s) | 279 |
| PctI | GAATGC | 1 cut(s) | 934 |
| PdmI | GAANNNNTTC | 1 cut(s) | 746 |
| PfeI | GAWTC | 4 cut(s) | 87, 865, 887, 973 |
| PkrI | GCNGC | 2 cut(s) | 481, 824 |
| PleI | GAGTC | 3 cut(s) | 282, 374, 475 |
| PpsI | GAGTC | 3 cut(s) | 282, 374, 475 |
| PpuMI | RGGWCCY | 1 cut(s) | 224 |
| PshBI | ATTAAT | 1 cut(s) | 333 |
| PsiI | TTATAA | 1 cut(s) | 294 |
| Psp124BI | GAGCTC | 2 cut(s) | 85, 419 |
| Psp5II | RGGWCCY | 1 cut(s) | 224 |
| Psp6I | CCWGG | 1 cut(s) | 278 |
| PspGI | CCWGG | 1 cut(s) | 278 |
| PspN4I | GGNNCC | 1 cut(s) | 202 |
| PspPI | GGNCC | 3 cut(s) | 224, 486, 849 |
| PspPPI | RGGWCCY | 1 cut(s) | 224 |
| PstNI | CAGNNNCTG | 1 cut(s) | 526 |
| PsuI | RGATCY | 3 cut(s) | 200, 875, 1000 |
| SacI | GAGCTC | 2 cut(s) | 85, 419 |
| SaqAI | TTAA | 3 cut(s) | 146, 159, 333 |
| SatI | GCNGC | 2 cut(s) | 480, 823 |
| Sau3AI | GATC | 9 cut(s) | 99, 200, 207, 244, 322, 799, 875, 922, 1000 |
| Sau96I | GGNCC | 3 cut(s) | 224, 486, 849 |
| SchI | GAGTC | 3 cut(s) | 283, 374, 476 |
| ScrFI | CCNGG | 3 cut(s) | 280, 1008, 1009 |
| SduI | GDGCHC | 2 cut(s) | 85, 419 |
| SfaNI | GCATC | 1 cut(s) | 748 |
| SfuI | TTCGAA | 2 cut(s) | 434, 882 |
| SinI | GGWCC | 3 cut(s) | 224, 486, 849 |
| SmaI | CCCGGG | 1 cut(s) | 1009 |
| SmlI | CTYRAG | 1 cut(s) | 441 |
| SmoI | CTYRAG | 1 cut(s) | 441 |
| Sse9I | AATT | 7 cut(s) | 127, 155, 163, 298, 330, 498, 593 |
| SsiI | CCGC | 3 cut(s) | 409, 852, 909 |
| SspMI | CTAG | 2 cut(s) | 353, 906 |
| SstI | GAGCTC | 2 cut(s) | 85, 419 |
| StyD4I | CCNGG | 3 cut(s) | 278, 1006, 1007 |
| StyI | CCWWGG | 2 cut(s) | 363, 696 |
| TaaI | ACNGT | 5 cut(s) | 608, 619, 661, 688, 809 |
| TaiI | ACGT | 3 cut(s) | 69, 99, 119 |
| TaqI | TCGA | 5 cut(s) | 85, 243, 434, 564, 882 |
| TasI | AATT | 7 cut(s) | 127, 155, 163, 298, 330, 498, 593 |
| TfiI | GAWTC | 4 cut(s) | 87, 865, 887, 973 |
| Tru1I | TTAA | 3 cut(s) | 146, 159, 333 |
| Tru9I | TTAA | 3 cut(s) | 146, 159, 333 |
| TscAI | CASTG | 2 cut(s) | 199, 622 |
| TseI | GCWGC | 2 cut(s) | 479, 822 |
| TspDTI | ATGAA | 7 cut(s) | 120, 230, 462, 549, 563, 857, 1029 |
| TspGWI | ACGGA | 1 cut(s) | 237 |
| TspMI | CCCGGG | 1 cut(s) | 1007 |
| TspRI | CASTG | 2 cut(s) | 199, 622 |
| VpaK11BI | GGWCC | 3 cut(s) | 224, 486, 849 |
| VspI | ATTAAT | 1 cut(s) | 333 |
| XapI | RAATTY | 3 cut(s) | 127, 155, 298 |
| XmaI | CCCGGG | 1 cut(s) | 1007 |
| XmiI | GTMKAC | 1 cut(s) | 981 |
| XmnI | GAANNNNTTC | 1 cut(s) | 746 |
| XspI | CTAG | 2 cut(s) | 353, 906 |