Rh2CG595700

prolyl 4-hydroxylase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
77181466 .. 77184003
2538 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG595700.1

Sequence Viewer

Length: 1047 bp
ATGGATGCTCGCTTCTTTCTCGCCCTCTCCCTCTGTTTCTTCTTCTTCCTCTTCTTCTTCCCTCACGTCTCCCATTCCAGAGCTCGAATCTCAGACGTGATCCCCAAGAAGCAAACGTATAATCTAAATTCATGTTTTTTTTTTTTAAATCTTGAATTTAATAATTTGATGGAGTATTGTGTGCATTTTTGCAGTGTGGGATCCCTGATCAGAATGAAGAGAGGTCCTTCTTCTGCTACATTCGATCCGTCTCGCGTCTCTCAGCTCTCTTGGAGTCCCAGGGCTTTTATTTATAAGAATTTTCTCTCTGAGGAGGAGTGTGATCATCTAATTAATCTGGCCAAAGATAAGCTAGAGGTGTCCATGGTGGCTGACAATGACTCTGGTAAGAGTATAAAGAGTGAAGTGCGGACGAGCTCCGGAATGTTCCTTTCGAAAGCTCAAGATGAAGTAGTTTCCAACATTGAGTCCAAGATTGCTGCATGGACCTTCCTTCCAATTGAGAATGGGGAGGCAATGCAGATACTGCACTATGAAAATGGTCAAAAGTATGAGCCACATTTCGATTATTTTCATGACAAAGCTAATCAAGAATTGGGTGGCCACCGTGTTGCCACTGTATTGATGTATCTCTCTAATGTTGAAAAGGGTGGGGAAACAGTCTTTCCTCATGCGCAGGTGAAAACGGTTGAAGCCAAGGATGAGGTCTTGTCTGATTGTGCAAAAAATGGCTATTCTGTGAAACCATTCAAGGGTGATGCCTTGCTGTTCTTCAGTCTTCTTCCTAATGCCACAACCGATCCAAACAGTTTGCATGGGAGCTGCCCTGTCATTGAGGGTGAGAAATGGTCCGCAACCAAGTGGATTCATGTGAGATCCTTCGAAGATTCAATCAGGCAGGGAACTAGCGGGGAGTGCAAGGATCAGAATGCAAACTGCTTTACATGGGCAAAAGCCGGTGAATGTGAGAAGAATCCTGTATACATGGTGGGTTCAGAGGATCTTCCCGGGTTTTGTAGGAAGAGTTGCAAGGTCTGTTCATCTTAG

Protein Analysis

348

Amino Acids

39.27

Weight (kDa)

6.14

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy PF03171 171 - 290 2.5e-09 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_3 PF13640 173 - 290 9.7e-19 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 294
AarI CACCTGC 1 cut(s) 667
Acc16I TGCGCA 1 cut(s) 675
Acc36I ACCTGC 1 cut(s) 667
AccI GTMKAC 1 cut(s) 981
AccII CGCG 1 cut(s) 255
AccIII TCCGGA 1 cut(s) 419
AciI CCGC 3 cut(s) 409, 852, 909
AclWI GGATC 8 cut(s) 94, 195, 208, 239, 794, 870, 930, 1008
AcoI YGGCCR 2 cut(s) 339, 601
AcsI RAATTY 3 cut(s) 127, 155, 298
AcuI CTGAAG 1 cut(s) 757
AfiI CCNNNNNNNGG 1 cut(s) 752
AgsI TTSAA 5 cut(s) 155, 644, 692, 751, 891
AjiI CACGTC 2 cut(s) 67, 97
AjnI CCWGG 1 cut(s) 278
AluBI AGCT 7 cut(s) 83, 265, 352, 417, 440, 584, 822
AluI AGCT 7 cut(s) 83, 265, 352, 417, 440, 584, 822
Alw21I GWGCWC 2 cut(s) 85, 419
Alw26I GTCTC 3 cut(s) 73, 255, 262
AlwI GGATC 8 cut(s) 94, 195, 208, 239, 794, 870, 930, 1008
AlwNI CAGNNNCTG 1 cut(s) 526
Ama87I CYCGRG 1 cut(s) 1007
Aor13HI TCCGGA 1 cut(s) 419
AoxI GGCC 2 cut(s) 339, 601
ApeKI GCWGC 2 cut(s) 479, 822
ApoI RAATTY 3 cut(s) 127, 155, 298
AseI ATTAAT 1 cut(s) 333
Asp700I GAANNNNTTC 1 cut(s) 746
AspLEI GCGC 1 cut(s) 676
AspS9I GGNCC 3 cut(s) 224, 486, 849
AsuC2I CCSGG 2 cut(s) 1008, 1009
AsuHPI GGTGA 4 cut(s) 691, 767, 851, 971
AsuII TTCGAA 2 cut(s) 434, 882
AvaI CYCGRG 1 cut(s) 1007
AvaII GGWCC 3 cut(s) 224, 486, 849
BalI TGGCCA 2 cut(s) 341, 603
BamHI GGATCC 1 cut(s) 200
BanII GRGCYC 2 cut(s) 85, 419
BbsI GAAGAC 1 cut(s) 770
Bbv12I GWGCWC 2 cut(s) 85, 419
BbvI GCAGC 2 cut(s) 466, 809
BccI CCATC 1 cut(s) 163
BciT130I CCWGG 1 cut(s) 280
BclI TGATCA 2 cut(s) 207, 322
BcnI CCSGG 2 cut(s) 1008, 1009
BcoDI GTCTC 3 cut(s) 73, 255, 262
BfaI CTAG 2 cut(s) 353, 906
BfuAI ACCTGC 1 cut(s) 667
BisI GCNGC 2 cut(s) 480, 823
BlsI GCNGC 2 cut(s) 481, 824
Bme1390I CCNGG 3 cut(s) 280, 1008, 1009
Bme18I GGWCC 3 cut(s) 224, 486, 849
BmeT110I CYCGRG 1 cut(s) 1007
BmgBI CACGTC 2 cut(s) 67, 97
BmgT120I GGNCC 3 cut(s) 224, 486, 849
BmiI GGNNCC 1 cut(s) 202
BmrFI CCNGG 3 cut(s) 280, 1008, 1009
BmsI GCATC 1 cut(s) 748
BpiI GAAGAC 1 cut(s) 770
Bpu14I TTCGAA 2 cut(s) 434, 882
BpuEI CTTGAG 1 cut(s) 426
BpuMI CCSGG 2 cut(s) 1008, 1009
BsaJI CCNNGG 5 cut(s) 278, 279, 363, 696, 1007
BsaWI WCCGGW 1 cut(s) 419
Bsc4I CCNNNNNNNGG 1 cut(s) 752
Bse118I RCCGGY 1 cut(s) 956
Bse3DI GCAATG 1 cut(s) 522
BseAI TCCGGA 1 cut(s) 419
BseBI CCWGG 1 cut(s) 280
BseDI CCNNGG 5 cut(s) 278, 279, 363, 696, 1007
BseGI GGATG 2 cut(s) 10, 706
BseLI CCNNNNNNNGG 1 cut(s) 752
BseMI GCAATG 1 cut(s) 522
BseMII CTCAG 3 cut(s) 105, 275, 300
BseRI GAGGAG 2 cut(s) 326, 329
BseXI GCAGC 2 cut(s) 466, 809
BsgI GTGCAG 1 cut(s) 512
Bsh1236I CGCG 1 cut(s) 255
BshFI GGCC 2 cut(s) 341, 603
BsiHKAI GWGCWC 2 cut(s) 85, 419
BsiHKCI CYCGRG 1 cut(s) 1007
BsiSI CCGG 3 cut(s) 420, 957, 1008
BslFI GGGAC 1 cut(s) 261
BslI CCNNNNNNNGG 1 cut(s) 752
BsmAI GTCTC 3 cut(s) 73, 255, 262
BsmBI CGTCTC 3 cut(s) 73, 255, 262
BsmFI GGGAC 1 cut(s) 261
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 2 cut(s) 341, 603
BsoBI CYCGRG 1 cut(s) 1007
Bsp119I TTCGAA 2 cut(s) 434, 882
Bsp1286I GDGCHC 2 cut(s) 85, 419
Bsp13I TCCGGA 1 cut(s) 419
Bsp143I GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
Bsp19I CCATGG 1 cut(s) 363
BspACI CCGC 3 cut(s) 409, 852, 909
BspANI GGCC 2 cut(s) 341, 603
BspCNI CTCAG 3 cut(s) 104, 274, 301
BspEI TCCGGA 1 cut(s) 419
BspFNI CGCG 1 cut(s) 255
BspHI TCATGA 1 cut(s) 574
BspLI GGNNCC 1 cut(s) 202
BspMI ACCTGC 1 cut(s) 667
BspPI GGATC 8 cut(s) 94, 195, 208, 239, 794, 870, 930, 1008
BspT104I TTCGAA 2 cut(s) 434, 882
BsrDI GCAATG 1 cut(s) 522
BsrFI RCCGGY 1 cut(s) 956
BssAI RCCGGY 1 cut(s) 956
BssECI CCNNGG 5 cut(s) 278, 279, 363, 696, 1007
BssMI GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
BssNAI GTATAC 1 cut(s) 982
BssT1I CCWWGG 2 cut(s) 363, 696
Bst1107I GTATAC 1 cut(s) 982
Bst2UI CCWGG 1 cut(s) 280
Bst4CI ACNGT 5 cut(s) 608, 619, 661, 688, 809
Bst6I CTCTTC 3 cut(s) 56, 212, 1016
BstAPI GCANNNNNTGC 1 cut(s) 526
BstBI TTCGAA 2 cut(s) 434, 882
BstC8I GCNNGC 1 cut(s) 10
BstDEI CTNAG 4 cut(s) 91, 261, 309, 1044
BstDSI CCRYGG 1 cut(s) 363
BstF5I GGATG 2 cut(s) 10, 706
BstFNI CGCG 1 cut(s) 255
BstHHI GCGC 1 cut(s) 676
BstKTI GATC 9 cut(s) 102, 203, 210, 247, 325, 802, 878, 925, 1003
BstMAI GTCTC 3 cut(s) 73, 255, 262
BstMBI GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
BstMWI GCNNNNNNNGC 2 cut(s) 526, 915
BstNI CCWGG 1 cut(s) 280
BstSCI CCNGG 3 cut(s) 278, 1006, 1007
BstUI CGCG 1 cut(s) 255
BstV1I GCAGC 2 cut(s) 466, 809
BstV2I GAAGAC 1 cut(s) 770
BstX2I RGATCY 3 cut(s) 200, 875, 1000
BstYI RGATCY 3 cut(s) 200, 875, 1000
BstZ17I GTATAC 1 cut(s) 982
BsuRI GGCC 2 cut(s) 341, 603
BtgI CCRYGG 1 cut(s) 363
BtrI CACGTC 2 cut(s) 67, 97
BtsCI GGATG 2 cut(s) 10, 706
BtsI GCAGTG 1 cut(s) 199
BtsIMutI CAGTG 2 cut(s) 199, 615
BveI ACCTGC 1 cut(s) 667
Cac8I GCNNGC 1 cut(s) 10
CaiI CAGNNNCTG 1 cut(s) 526
CciI TCATGA 1 cut(s) 574
CfoI GCGC 1 cut(s) 676
Cfr10I RCCGGY 1 cut(s) 956
Cfr13I GGNCC 3 cut(s) 224, 486, 849
Cfr9I CCCGGG 1 cut(s) 1007
CseI GACGC 1 cut(s) 244
CviAII CATG 9 cut(s) 132, 364, 483, 575, 671, 815, 869, 945, 985
DdeI CTNAG 4 cut(s) 91, 261, 309, 1044
DpnI GATC 9 cut(s) 101, 202, 209, 246, 324, 801, 877, 924, 1002
DpnII GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
DraI TTTAAA 1 cut(s) 147
EaeI YGGCCR 2 cut(s) 339, 601
Eam1104I CTCTTC 3 cut(s) 56, 212, 1016
EarI CTCTTC 3 cut(s) 56, 212, 1016
Ecl136II GAGCTC 2 cut(s) 83, 417
Eco130I CCWWGG 2 cut(s) 363, 696
Eco24I GRGCYC 2 cut(s) 85, 419
Eco47I GGWCC 3 cut(s) 224, 486, 849
Eco53kI GAGCTC 2 cut(s) 83, 417
Eco57I CTGAAG 1 cut(s) 757
Eco88I CYCGRG 1 cut(s) 1007
EcoICRI GAGCTC 2 cut(s) 83, 417
EcoO109I RGGNCCY 1 cut(s) 224
EcoRII CCWGG 1 cut(s) 278
EcoT14I CCWWGG 2 cut(s) 363, 696
EcoT38I GRGCYC 2 cut(s) 85, 419
ErhI CCWWGG 2 cut(s) 363, 696
Esp3I CGTCTC 3 cut(s) 73, 255, 262
FaeI CATG 9 cut(s) 135, 367, 486, 578, 674, 818, 872, 948, 988
FaqI GGGAC 1 cut(s) 261
FatI CATG 9 cut(s) 131, 363, 482, 574, 670, 814, 868, 944, 984
FauI CCCGC 1 cut(s) 902
FbaI TGATCA 2 cut(s) 207, 322
FblI GTMKAC 1 cut(s) 981
Fnu4HI GCNGC 2 cut(s) 480, 823
FokI GGATG 2 cut(s) 17, 713
FriOI GRGCYC 2 cut(s) 85, 419
Fsp4HI GCNGC 2 cut(s) 480, 823
FspBI CTAG 2 cut(s) 353, 906
FspI TGCGCA 1 cut(s) 675
GlaI GCGC 1 cut(s) 675
GluI GCNGC 2 cut(s) 480, 823
HaeIII GGCC 2 cut(s) 341, 603
HapII CCGG 3 cut(s) 420, 957, 1008
HgaI GACGC 1 cut(s) 244
HhaI GCGC 1 cut(s) 676
Hin1II CATG 9 cut(s) 135, 367, 486, 578, 674, 818, 872, 948, 988
Hin6I GCGC 1 cut(s) 674
HinP1I GCGC 1 cut(s) 674
HinfI GANTC 7 cut(s) 87, 274, 380, 467, 865, 887, 973
HpaII CCGG 3 cut(s) 420, 957, 1008
HphI GGTGA 4 cut(s) 691, 767, 851, 971
Hpy166II GTNNAC 1 cut(s) 982
Hpy188I TCNGA 6 cut(s) 94, 212, 310, 715, 927, 997
Hpy188III TCNNGA 6 cut(s) 78, 152, 420, 443, 575, 590
Hpy8I GTNNAC 1 cut(s) 982
HpyAV CCTTC 4 cut(s) 237, 499, 503, 889
HpyCH4III ACNGT 5 cut(s) 608, 619, 661, 688, 809
HpyCH4IV ACGT 3 cut(s) 66, 96, 116
HpyF10VI GCNNNNNNNGC 2 cut(s) 526, 915
HpyF3I CTNAG 4 cut(s) 91, 261, 309, 1044
HpySE526I ACGT 3 cut(s) 66, 96, 116
Hsp92II CATG 9 cut(s) 135, 367, 486, 578, 674, 818, 872, 948, 988
HspAI GCGC 1 cut(s) 674
Kpn2I TCCGGA 1 cut(s) 419
Ksp22I TGATCA 2 cut(s) 207, 322
Kzo9I GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
LmnI GCTCC 2 cut(s) 422, 819
Lsp1109I GCAGC 2 cut(s) 466, 809
LweI GCATC 1 cut(s) 748
MaeI CTAG 2 cut(s) 353, 906
MaeII ACGT 3 cut(s) 66, 96, 116
MalI GATC 9 cut(s) 101, 202, 209, 246, 324, 801, 877, 924, 1002
MboI GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
MfeI CAATTG 1 cut(s) 498
MflI RGATCY 3 cut(s) 200, 875, 1000
MhlI GDGCHC 2 cut(s) 85, 419
MlsI TGGCCA 2 cut(s) 341, 603
MluCI AATT 7 cut(s) 127, 155, 163, 298, 330, 498, 593
MluNI TGGCCA 2 cut(s) 341, 603
MlyI GAGTC 3 cut(s) 283, 374, 476
MmeI TCCRAC 1 cut(s) 483
Mox20I TGGCCA 2 cut(s) 341, 603
MroI TCCGGA 1 cut(s) 419
MroXI GAANNNNTTC 1 cut(s) 746
MscI TGGCCA 2 cut(s) 341, 603
MseI TTAA 3 cut(s) 146, 159, 333
Msp20I TGGCCA 2 cut(s) 341, 603
MspI CCGG 3 cut(s) 420, 957, 1008
MspR9I CCNGG 3 cut(s) 280, 1008, 1009
MunI CAATTG 1 cut(s) 498
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 1 cut(s) 280
MvnI CGCG 1 cut(s) 255
MwoI GCNNNNNNNGC 2 cut(s) 526, 915
NciI CCSGG 2 cut(s) 1008, 1009
NcoI CCATGG 1 cut(s) 363
NdeII GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
NlaIII CATG 9 cut(s) 135, 367, 486, 578, 674, 818, 872, 948, 988
NlaIV GGNNCC 1 cut(s) 202
NsbI TGCGCA 1 cut(s) 675
NspV TTCGAA 2 cut(s) 434, 882
PagI TCATGA 1 cut(s) 574
PaqCI CACCTGC 1 cut(s) 667
PasI CCCWGGG 1 cut(s) 279
PctI GAATGC 1 cut(s) 934
PdmI GAANNNNTTC 1 cut(s) 746
PfeI GAWTC 4 cut(s) 87, 865, 887, 973
PkrI GCNGC 2 cut(s) 481, 824
PleI GAGTC 3 cut(s) 282, 374, 475
PpsI GAGTC 3 cut(s) 282, 374, 475
PpuMI RGGWCCY 1 cut(s) 224
PshBI ATTAAT 1 cut(s) 333
PsiI TTATAA 1 cut(s) 294
Psp124BI GAGCTC 2 cut(s) 85, 419
Psp5II RGGWCCY 1 cut(s) 224
Psp6I CCWGG 1 cut(s) 278
PspGI CCWGG 1 cut(s) 278
PspN4I GGNNCC 1 cut(s) 202
PspPI GGNCC 3 cut(s) 224, 486, 849
PspPPI RGGWCCY 1 cut(s) 224
PstNI CAGNNNCTG 1 cut(s) 526
PsuI RGATCY 3 cut(s) 200, 875, 1000
SacI GAGCTC 2 cut(s) 85, 419
SaqAI TTAA 3 cut(s) 146, 159, 333
SatI GCNGC 2 cut(s) 480, 823
Sau3AI GATC 9 cut(s) 99, 200, 207, 244, 322, 799, 875, 922, 1000
Sau96I GGNCC 3 cut(s) 224, 486, 849
SchI GAGTC 3 cut(s) 283, 374, 476
ScrFI CCNGG 3 cut(s) 280, 1008, 1009
SduI GDGCHC 2 cut(s) 85, 419
SfaNI GCATC 1 cut(s) 748
SfuI TTCGAA 2 cut(s) 434, 882
SinI GGWCC 3 cut(s) 224, 486, 849
SmaI CCCGGG 1 cut(s) 1009
SmlI CTYRAG 1 cut(s) 441
SmoI CTYRAG 1 cut(s) 441
Sse9I AATT 7 cut(s) 127, 155, 163, 298, 330, 498, 593
SsiI CCGC 3 cut(s) 409, 852, 909
SspMI CTAG 2 cut(s) 353, 906
SstI GAGCTC 2 cut(s) 85, 419
StyD4I CCNGG 3 cut(s) 278, 1006, 1007
StyI CCWWGG 2 cut(s) 363, 696
TaaI ACNGT 5 cut(s) 608, 619, 661, 688, 809
TaiI ACGT 3 cut(s) 69, 99, 119
TaqI TCGA 5 cut(s) 85, 243, 434, 564, 882
TasI AATT 7 cut(s) 127, 155, 163, 298, 330, 498, 593
TfiI GAWTC 4 cut(s) 87, 865, 887, 973
Tru1I TTAA 3 cut(s) 146, 159, 333
Tru9I TTAA 3 cut(s) 146, 159, 333
TscAI CASTG 2 cut(s) 199, 622
TseI GCWGC 2 cut(s) 479, 822
TspDTI ATGAA 7 cut(s) 120, 230, 462, 549, 563, 857, 1029
TspGWI ACGGA 1 cut(s) 237
TspMI CCCGGG 1 cut(s) 1007
TspRI CASTG 2 cut(s) 199, 622
VpaK11BI GGWCC 3 cut(s) 224, 486, 849
VspI ATTAAT 1 cut(s) 333
XapI RAATTY 3 cut(s) 127, 155, 298
XmaI CCCGGG 1 cut(s) 1007
XmiI GTMKAC 1 cut(s) 981
XmnI GAANNNNTTC 1 cut(s) 746
XspI CTAG 2 cut(s) 353, 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.