Rh3BG366400

Subtilase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
45376471 .. 45385642
9172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG366400.1

Sequence Viewer

Length: 318 bp
ATGGCTCCTCCTCCAGGGATTGTTGTCACCCTTTTGCTTCTTCTTGCTCTGCAGAGTTATGGGTTCGTTCTTTCTTTTGCTTCCACAAATGTTTACATTGTCTATATGGGAGAAAGAAAGTATGGAAACCCCGATCTGGCATCTGAGTCTCACCATGAGATTCTGTCATATGTATTGGAAAAATCAAGTTCAAGGCCTTTGATTTGGGAGGTCATCAGATTGCTCGCAGGGTCTGGAAGGATTACTACGCAAAGATTGGGAAGTTGCTCTACGCAAGGATTACAGCAAACCAACTTCAACATGGACCTGTTGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.62

Weight (kDa)

7.9

Isoelectric Point (pI)

35.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 2 cut(s) 14, 136
AgsI TTSAA 3 cut(s) 192, 298, 313
AjnI CCWGG 1 cut(s) 13
Alw26I GTCTC 1 cut(s) 153
AlwNI CAGNNNCTG 1 cut(s) 233
AoxI GGCC 1 cut(s) 194
AspS9I GGNCC 1 cut(s) 304
AsuHPI GGTGA 2 cut(s) 19, 143
AvaII GGWCC 1 cut(s) 304
BarI GAAGNNNNNNTAC 4 cut(s) 229, 253, 261, 285
BciT130I CCWGG 1 cut(s) 15
BcoDI GTCTC 1 cut(s) 153
BfmI CTRYAG 1 cut(s) 50
Bme1390I CCNGG 1 cut(s) 15
Bme18I GGWCC 1 cut(s) 304
BmgT120I GGNCC 1 cut(s) 304
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 15
BmsI GCATC 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 14
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 136
BseBI CCWGG 1 cut(s) 15
BseDI CCNNGG 1 cut(s) 14
BseLI CCNNNNNNNGG 2 cut(s) 14, 136
BseMII CTCAG 1 cut(s) 135
BshFI GGCC 1 cut(s) 196
BslI CCNNNNNNNGG 2 cut(s) 14, 136
BsmAI GTCTC 1 cut(s) 153
BsnI GGCC 1 cut(s) 196
Bsp143I GATC 1 cut(s) 133
BspANI GGCC 1 cut(s) 196
BspCNI CTCAG 1 cut(s) 136
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 1 cut(s) 54
BssECI CCNNGG 1 cut(s) 14
BssMI GATC 1 cut(s) 133
Bst2UI CCWGG 1 cut(s) 15
BstC8I GCNNGC 1 cut(s) 225
BstDEI CTNAG 1 cut(s) 144
BstENI CCTNNNNNAGG 1 cut(s) 12
BstKTI GATC 1 cut(s) 136
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 1 cut(s) 133
BstNI CCWGG 1 cut(s) 15
BstSCI CCNGG 1 cut(s) 13
BstSFI CTRYAG 1 cut(s) 50
BsuRI GGCC 1 cut(s) 196
Cac8I GCNNGC 1 cut(s) 225
CaiI CAGNNNCTG 1 cut(s) 233
Cfr13I GGNCC 1 cut(s) 304
CviAII CATG 2 cut(s) 155, 301
CviJI RGCY 2 cut(s) 5, 196
CviKI_1 RGCY 2 cut(s) 5, 196
DdeI CTNAG 1 cut(s) 144
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
Eco147I AGGCCT 1 cut(s) 196
Eco47I GGWCC 1 cut(s) 304
EcoNI CCTNNNNNAGG 1 cut(s) 12
EcoRII CCWGG 1 cut(s) 13
FaeI CATG 2 cut(s) 158, 304
FaiI YATR 8 cut(s) 60, 105, 107, 123, 156, 169, 171, 302
FatI CATG 2 cut(s) 154, 300
FauNDI CATATG 1 cut(s) 169
HaeIII GGCC 1 cut(s) 196
Hin1II CATG 2 cut(s) 158, 304
HinfI GANTC 2 cut(s) 146, 160
HphI GGTGA 2 cut(s) 19, 143
Hpy166II GTNNAC 1 cut(s) 94
Hpy188I TCNGA 2 cut(s) 145, 218
Hpy188III TCNNGA 1 cut(s) 234
Hpy8I GTNNAC 1 cut(s) 94
HpyAV CCTTC 1 cut(s) 231
HpyCH4V TGCA 1 cut(s) 52
HpyF3I CTNAG 1 cut(s) 144
Hsp92II CATG 2 cut(s) 158, 304
Kzo9I GATC 1 cut(s) 133
LmnI GCTCC 1 cut(s) 10
LpnPI CCDG 4 cut(s) 27, 122, 213, 219
LweI GCATC 1 cut(s) 149
MaeIII GTNAC 1 cut(s) 25
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MboII GAAGA 1 cut(s) 32
MlyI GAGTC 1 cut(s) 155
MnlI CCTC 3 cut(s) 18, 21, 202
MspR9I CCNGG 1 cut(s) 15
MvaI CCWGG 1 cut(s) 15
NdeI CATATG 1 cut(s) 169
NdeII GATC 1 cut(s) 133
NlaIII CATG 2 cut(s) 158, 304
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 1 cut(s) 25
PceI AGGCCT 1 cut(s) 196
PfeI GAWTC 1 cut(s) 160
PleI GAGTC 1 cut(s) 154
PpsI GAGTC 1 cut(s) 154
Psp6I CCWGG 1 cut(s) 13
PspGI CCWGG 1 cut(s) 13
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 304
PstI CTGCAG 1 cut(s) 54
PstNI CAGNNNCTG 1 cut(s) 233
Sau3AI GATC 1 cut(s) 133
Sau96I GGNCC 1 cut(s) 304
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 1 cut(s) 15
SetI ASST 2 cut(s) 213, 309
SfaNI GCATC 1 cut(s) 149
SfcI CTRYAG 1 cut(s) 50
SinI GGWCC 1 cut(s) 304
SseBI AGGCCT 1 cut(s) 196
StuI AGGCCT 1 cut(s) 196
StyD4I CCNGG 1 cut(s) 13
TfiI GAWTC 1 cut(s) 160
TseFI GTSAC 1 cut(s) 25
Tsp45I GTSAC 1 cut(s) 25
VpaK11BI GGWCC 1 cut(s) 304
XagI CCTNNNNNAGG 1 cut(s) 12
XcmI CCANNNNNNNNNTGG 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.