Belongs to the peptidase M24B family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0119511 RchiOBHm_Chr2g0172521 |
| rosa_laevigata | RLG00000006531 RLG00000012244 RLG00000014102 RLG00000035857 |
| rosa_roxburghii | Rroxscaffold_4G00308930 Rroxscaffold_5G00335740 Rroxscaffold_7G00201740 |
| rosa_rugosa | Rorug01G0350400 Rorug03G0199800 |
| rosa_samantha | Rh3BG301900 Rh3BG366400 Rh5BG223900 Rh5DG392600 Rh6DG139300 Rh7BG294400 |
| rosa_wichuraiana | Rw1G016640 Rw2G019660 Rw2G030710 Rw4G018010 Rw6G011260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 99, 124 |
| AfaI | GTAC | 1 cut(s) | 24 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 66, 253, 340 |
| AgsI | TTSAA | 2 cut(s) | 38, 396 |
| AjnI | CCWGG | 1 cut(s) | 252 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 38, 70 |
| AluBI | AGCT | 2 cut(s) | 8, 340 |
| AluI | AGCT | 2 cut(s) | 8, 340 |
| Alw26I | GTCTC | 2 cut(s) | 20, 357 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 437 |
| Ama87I | CYCGRG | 1 cut(s) | 335 |
| AoxI | GGCC | 2 cut(s) | 57, 398 |
| ApeKI | GCWGC | 2 cut(s) | 113, 153 |
| AspS9I | GGNCC | 1 cut(s) | 58 |
| AsuC2I | CCSGG | 1 cut(s) | 174 |
| AsuHPI | GGTGA | 2 cut(s) | 258, 347 |
| AvaI | CYCGRG | 1 cut(s) | 335 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 433 |
| BbvI | GCAGC | 2 cut(s) | 100, 140 |
| BccI | CCATC | 1 cut(s) | 128 |
| BciT130I | CCWGG | 1 cut(s) | 254 |
| BcnI | CCSGG | 1 cut(s) | 174 |
| BcoDI | GTCTC | 2 cut(s) | 20, 357 |
| BfaI | CTAG | 1 cut(s) | 63 |
| BisI | GCNGC | 2 cut(s) | 114, 154 |
| BlsI | GCNGC | 2 cut(s) | 115, 155 |
| Bme1390I | CCNGG | 2 cut(s) | 174, 254 |
| BmeT110I | CYCGRG | 1 cut(s) | 335 |
| BmgT120I | GGNCC | 1 cut(s) | 58 |
| BmiI | GGNNCC | 2 cut(s) | 60, 245 |
| BmrFI | CCNGG | 2 cut(s) | 174, 254 |
| BmsI | GCATC | 1 cut(s) | 353 |
| BpmI | CTGGAG | 1 cut(s) | 236 |
| BpuMI | CCSGG | 1 cut(s) | 174 |
| BsaJI | CCNNGG | 1 cut(s) | 253 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 66, 253, 340 |
| Bse1I | ACTGG | 1 cut(s) | 193 |
| BseBI | CCWGG | 1 cut(s) | 254 |
| BseDI | CCNNGG | 1 cut(s) | 253 |
| BseGI | GGATG | 1 cut(s) | 120 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 66, 253, 340 |
| BseNI | ACTGG | 1 cut(s) | 193 |
| BseRI | GAGGAG | 2 cut(s) | 236, 239 |
| BseXI | GCAGC | 2 cut(s) | 100, 140 |
| BsgI | GTGCAG | 1 cut(s) | 274 |
| BshFI | GGCC | 2 cut(s) | 59, 400 |
| BsiHKCI | CYCGRG | 1 cut(s) | 335 |
| BsiSI | CCGG | 1 cut(s) | 174 |
| BslFI | GGGAC | 1 cut(s) | 175 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 66, 253, 340 |
| BsmAI | GTCTC | 2 cut(s) | 20, 357 |
| BsmFI | GGGAC | 1 cut(s) | 175 |
| BsnI | GGCC | 2 cut(s) | 59, 400 |
| BsoBI | CYCGRG | 1 cut(s) | 335 |
| Bsp143I | GATC | 1 cut(s) | 105 |
| BspACI | CCGC | 2 cut(s) | 99, 124 |
| BspANI | GGCC | 2 cut(s) | 59, 400 |
| BspLI | GGNNCC | 2 cut(s) | 60, 245 |
| BsrI | ACTGG | 1 cut(s) | 193 |
| BssECI | CCNNGG | 1 cut(s) | 253 |
| BssMI | GATC | 1 cut(s) | 105 |
| Bst2UI | CCWGG | 1 cut(s) | 254 |
| Bst4CI | ACNGT | 1 cut(s) | 295 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 342, 429 |
| BstDEI | CTNAG | 1 cut(s) | 348 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 251 |
| BstF5I | GGATG | 1 cut(s) | 120 |
| BstKTI | GATC | 1 cut(s) | 108 |
| BstMAI | GTCTC | 2 cut(s) | 20, 357 |
| BstMBI | GATC | 1 cut(s) | 105 |
| BstNI | CCWGG | 1 cut(s) | 254 |
| BstSCI | CCNGG | 2 cut(s) | 172, 252 |
| BstV1I | GCAGC | 2 cut(s) | 100, 140 |
| BsuRI | GGCC | 2 cut(s) | 59, 400 |
| BtsCI | GGATG | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 342, 429 |
| CaiI | CAGNNNCTG | 1 cut(s) | 437 |
| Cfr13I | GGNCC | 1 cut(s) | 58 |
| Csp6I | GTAC | 1 cut(s) | 23 |
| CviAII | CATG | 1 cut(s) | 359 |
| CviJI | RGCY | 8 cut(s) | 8, 43, 59, 192, 209, 244, 340, 400 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 43, 59, 192, 209, 244, 340, 400 |
| CviQI | GTAC | 1 cut(s) | 23 |
| DdeI | CTNAG | 1 cut(s) | 348 |
| DpnI | GATC | 1 cut(s) | 107 |
| DpnII | GATC | 1 cut(s) | 105 |
| EciI | GGCGGA | 1 cut(s) | 113 |
| Eco147I | AGGCCT | 1 cut(s) | 400 |
| Eco88I | CYCGRG | 1 cut(s) | 335 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 251 |
| EcoRII | CCWGG | 1 cut(s) | 252 |
| FaeI | CATG | 1 cut(s) | 362 |
| FaiI | YATR | 8 cut(s) | 239, 241, 309, 311, 327, 360, 373, 375 |
| FaqI | GGGAC | 1 cut(s) | 175 |
| FatI | CATG | 1 cut(s) | 358 |
| FauNDI | CATATG | 2 cut(s) | 239, 373 |
| Fnu4HI | GCNGC | 2 cut(s) | 114, 154 |
| FokI | GGATG | 1 cut(s) | 107 |
| Fsp4HI | GCNGC | 2 cut(s) | 114, 154 |
| FspBI | CTAG | 1 cut(s) | 63 |
| GluI | GCNGC | 2 cut(s) | 114, 154 |
| GsuI | CTGGAG | 1 cut(s) | 236 |
| HaeIII | GGCC | 2 cut(s) | 59, 400 |
| HapII | CCGG | 1 cut(s) | 174 |
| Hin1II | CATG | 1 cut(s) | 362 |
| HinfI | GANTC | 4 cut(s) | 141, 169, 220, 364 |
| HpaII | CCGG | 1 cut(s) | 174 |
| HphI | GGTGA | 2 cut(s) | 258, 347 |
| Hpy166II | GTNNAC | 1 cut(s) | 298 |
| Hpy188I | TCNGA | 2 cut(s) | 20, 422 |
| Hpy188III | TCNNGA | 1 cut(s) | 438 |
| Hpy8I | GTNNAC | 1 cut(s) | 298 |
| HpyAV | CCTTC | 2 cut(s) | 96, 435 |
| HpyCH4III | ACNGT | 1 cut(s) | 295 |
| HpyCH4V | TGCA | 1 cut(s) | 291 |
| HpyF3I | CTNAG | 1 cut(s) | 348 |
| Hsp92II | CATG | 1 cut(s) | 362 |
| Kzo9I | GATC | 1 cut(s) | 105 |
| LmnI | GCTCC | 1 cut(s) | 249 |
| LpnPI | CCDG | 7 cut(s) | 187, 206, 239, 266, 326, 417, 423 |
| Lsp1109I | GCAGC | 2 cut(s) | 100, 140 |
| LweI | GCATC | 1 cut(s) | 353 |
| MaeI | CTAG | 1 cut(s) | 63 |
| MaeIII | GTNAC | 1 cut(s) | 264 |
| MalI | GATC | 1 cut(s) | 107 |
| MboI | GATC | 1 cut(s) | 105 |
| MboII | GAAGA | 1 cut(s) | 271 |
| MlyI | GAGTC | 1 cut(s) | 214 |
| MnlI | CCTC | 5 cut(s) | 138, 158, 257, 260, 406 |
| MslI | CAYNNNNRTG | 1 cut(s) | 238 |
| MspI | CCGG | 1 cut(s) | 174 |
| MspR9I | CCNGG | 2 cut(s) | 174, 254 |
| MvaI | CCWGG | 1 cut(s) | 254 |
| NciI | CCSGG | 1 cut(s) | 174 |
| NdeI | CATATG | 2 cut(s) | 239, 373 |
| NdeII | GATC | 1 cut(s) | 105 |
| NlaIII | CATG | 1 cut(s) | 362 |
| NlaIV | GGNNCC | 2 cut(s) | 60, 245 |
| NmuCI | GTSAC | 1 cut(s) | 264 |
| PceI | AGGCCT | 1 cut(s) | 400 |
| PfeI | GAWTC | 3 cut(s) | 141, 169, 364 |
| PfoI | TCCNGGA | 1 cut(s) | 172 |
| PkrI | GCNGC | 2 cut(s) | 115, 155 |
| PleI | GAGTC | 1 cut(s) | 214 |
| PpsI | GAGTC | 1 cut(s) | 214 |
| Psp6I | CCWGG | 1 cut(s) | 252 |
| PspGI | CCWGG | 1 cut(s) | 252 |
| PspN4I | GGNNCC | 2 cut(s) | 60, 245 |
| PspPI | GGNCC | 1 cut(s) | 58 |
| PstNI | CAGNNNCTG | 1 cut(s) | 437 |
| RsaI | GTAC | 1 cut(s) | 24 |
| RsaNI | GTAC | 1 cut(s) | 23 |
| RseI | CAYNNNNRTG | 1 cut(s) | 238 |
| SatI | GCNGC | 2 cut(s) | 114, 154 |
| Sau3AI | GATC | 1 cut(s) | 105 |
| Sau96I | GGNCC | 1 cut(s) | 58 |
| SchI | GAGTC | 1 cut(s) | 214 |
| ScrFI | CCNGG | 2 cut(s) | 174, 254 |
| SetI | ASST | 5 cut(s) | 10, 28, 342, 417, 461 |
| SfaNI | GCATC | 1 cut(s) | 353 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 238 |
| SseBI | AGGCCT | 1 cut(s) | 400 |
| SsiI | CCGC | 2 cut(s) | 99, 124 |
| SspMI | CTAG | 1 cut(s) | 63 |
| StuI | AGGCCT | 1 cut(s) | 400 |
| StyD4I | CCNGG | 2 cut(s) | 172, 252 |
| TaaI | ACNGT | 1 cut(s) | 295 |
| TaqI | TCGA | 4 cut(s) | 89, 104, 139, 182 |
| TfiI | GAWTC | 3 cut(s) | 141, 169, 364 |
| TseFI | GTSAC | 1 cut(s) | 264 |
| TseI | GCWGC | 2 cut(s) | 113, 153 |
| Tsp45I | GTSAC | 1 cut(s) | 264 |
| TspDTI | ATGAA | 1 cut(s) | 187 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 251 |
| XspI | CTAG | 1 cut(s) | 63 |