Rw6G011260

Subtilase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
19780976 .. 19781852
877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G011260.1

Sequence Viewer

Length: 291 bp
ATGGCTCCTCCTCCAGGGATTGTTGTCACCCTTTTGCTTCTTCTTGCTCTGCACAGTTATGGGTTCGTTCTTTCTTTTGCTTCCACAAATGTTTACATTGTCTATATGGGAAAAAGAAAGTATGGAAACCCCGAGCTGGCATCTGAGTCTCACCATGAGATTCTGTCATATGTATTGGCAAAATCAAGTTCAAGGCCTTTGATTTGGGAGGTCATCAGATTGCTCGCAGGGTCTGGAAGGATTACTACGCAAAGTAAAGGATTTTATTTAAAGGGTGATTTGTGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

96

Amino Acids

10.65

Weight (kDa)

9.35

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 2 cut(s) 14, 136
AgsI TTSAA 1 cut(s) 192
AjnI CCWGG 1 cut(s) 13
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
Alw26I GTCTC 1 cut(s) 153
AlwNI CAGNNNCTG 1 cut(s) 233
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 1 cut(s) 194
AsuHPI GGTGA 3 cut(s) 19, 143, 287
AvaI CYCGRG 1 cut(s) 131
BarI GAAGNNNNNNTAC 2 cut(s) 229, 261
BciT130I CCWGG 1 cut(s) 15
BcoDI GTCTC 1 cut(s) 153
Bme1390I CCNGG 1 cut(s) 15
BmeT110I CYCGRG 1 cut(s) 131
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 15
BmsI GCATC 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 14
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 136
BseBI CCWGG 1 cut(s) 15
BseDI CCNNGG 1 cut(s) 14
BseLI CCNNNNNNNGG 2 cut(s) 14, 136
BseMII CTCAG 1 cut(s) 135
BsgI GTGCAG 1 cut(s) 35
BshFI GGCC 1 cut(s) 196
BsiHKCI CYCGRG 1 cut(s) 131
BslI CCNNNNNNNGG 2 cut(s) 14, 136
BsmAI GTCTC 1 cut(s) 153
BsnI GGCC 1 cut(s) 196
BsoBI CYCGRG 1 cut(s) 131
BspANI GGCC 1 cut(s) 196
BspCNI CTCAG 1 cut(s) 136
BspLI GGNNCC 1 cut(s) 6
BssECI CCNNGG 1 cut(s) 14
Bst2UI CCWGG 1 cut(s) 15
Bst4CI ACNGT 1 cut(s) 56
BstC8I GCNNGC 2 cut(s) 138, 225
BstDEI CTNAG 1 cut(s) 144
BstENI CCTNNNNNAGG 1 cut(s) 12
BstMAI GTCTC 1 cut(s) 153
BstNI CCWGG 1 cut(s) 15
BstSCI CCNGG 1 cut(s) 13
BsuRI GGCC 1 cut(s) 196
Cac8I GCNNGC 2 cut(s) 138, 225
CaiI CAGNNNCTG 1 cut(s) 233
CviAII CATG 1 cut(s) 155
CviJI RGCY 3 cut(s) 5, 136, 196
CviKI_1 RGCY 3 cut(s) 5, 136, 196
DdeI CTNAG 1 cut(s) 144
DraI TTTAAA 1 cut(s) 270
Eco147I AGGCCT 1 cut(s) 196
Eco88I CYCGRG 1 cut(s) 131
EcoNI CCTNNNNNAGG 1 cut(s) 12
EcoRII CCWGG 1 cut(s) 13
FaeI CATG 1 cut(s) 158
FaiI YATR 7 cut(s) 60, 105, 107, 123, 156, 169, 171
FatI CATG 1 cut(s) 154
FauNDI CATATG 1 cut(s) 169
HaeIII GGCC 1 cut(s) 196
Hin1II CATG 1 cut(s) 158
HinfI GANTC 2 cut(s) 146, 160
HphI GGTGA 3 cut(s) 19, 143, 287
Hpy166II GTNNAC 1 cut(s) 94
Hpy188I TCNGA 2 cut(s) 145, 218
Hpy188III TCNNGA 1 cut(s) 234
Hpy8I GTNNAC 1 cut(s) 94
HpyAV CCTTC 1 cut(s) 231
HpyCH4III ACNGT 1 cut(s) 56
HpyCH4V TGCA 1 cut(s) 52
HpyF3I CTNAG 1 cut(s) 144
Hsp92II CATG 1 cut(s) 158
LmnI GCTCC 1 cut(s) 10
LpnPI CCDG 4 cut(s) 27, 122, 213, 219
LweI GCATC 1 cut(s) 149
MaeIII GTNAC 1 cut(s) 25
MboII GAAGA 1 cut(s) 32
MlyI GAGTC 1 cut(s) 155
MnlI CCTC 3 cut(s) 18, 21, 202
MseI TTAA 1 cut(s) 269
MslI CAYNNNNRTG 1 cut(s) 57
MspR9I CCNGG 1 cut(s) 15
MvaI CCWGG 1 cut(s) 15
NdeI CATATG 1 cut(s) 169
NlaIII CATG 1 cut(s) 158
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 1 cut(s) 25
PceI AGGCCT 1 cut(s) 196
PfeI GAWTC 1 cut(s) 160
PleI GAGTC 1 cut(s) 154
PpsI GAGTC 1 cut(s) 154
Psp6I CCWGG 1 cut(s) 13
PspGI CCWGG 1 cut(s) 13
PspN4I GGNNCC 1 cut(s) 6
PstNI CAGNNNCTG 1 cut(s) 233
RseI CAYNNNNRTG 1 cut(s) 57
SaqAI TTAA 1 cut(s) 269
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 1 cut(s) 15
SetI ASST 2 cut(s) 138, 213
SfaNI GCATC 1 cut(s) 149
SmiMI CAYNNNNRTG 1 cut(s) 57
SseBI AGGCCT 1 cut(s) 196
StuI AGGCCT 1 cut(s) 196
StyD4I CCNGG 1 cut(s) 13
TaaI ACNGT 1 cut(s) 56
TfiI GAWTC 1 cut(s) 160
Tru1I TTAA 1 cut(s) 269
Tru9I TTAA 1 cut(s) 269
TseFI GTSAC 1 cut(s) 25
Tsp45I GTSAC 1 cut(s) 25
XagI CCTNNNNNAGG 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.