Rh3DG063600

Microtubule-binding protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
4238351 .. 4239138
788 bp
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UTR
Exon/CDS
Intron
Rh3DG063600.1

Sequence Viewer

Length: 327 bp
ATGGTTGCTAAAACCCCACCAAAGCAGAGGAAGATGGTAGCCCCTCTCAATCCAGCTCTGCTTAGAGAAACAGTGAAGAAGGTGGATAGGTGTATGGCTAGGTTGCAGGAGCTACAGTACACAGTGACTGGTGGGACGAAGGTGATATCTGGAGTGAGTCTCAGCCCGAGAAGTACTAGAGTTTATCTGAGGACTAGTCTTAGATGCAAACAAGAATCTGCAAGGATTAAAGGTTTGACGCCGAGGAAATCTCCGGTGGGGAAGTTTCCAGCTGGGAAGTCTCCGGCAAAGTCAGCAGGTATTTGGTCACTGTTTGTAGTATGTTAA

Protein Analysis

108

Amino Acids

11.84

Weight (kDa)

11.09

Isoelectric Point (pI)

53.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 287
AcyI GRCGYC 1 cut(s) 239
AfaI GTAC 2 cut(s) 119, 175
AhlI ACTAGT 1 cut(s) 194
AluBI AGCT 3 cut(s) 56, 112, 272
AluI AGCT 3 cut(s) 56, 112, 272
Alw26I GTCTC 2 cut(s) 164, 285
AlwNI CAGNNNCTG 1 cut(s) 128
Ama87I CYCGRG 1 cut(s) 166
AsuHPI GGTGA 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 166
BccI CCATC 1 cut(s) 28
BcoDI GTCTC 2 cut(s) 164, 285
BcuI ACTAGT 1 cut(s) 194
BfaI CTAG 3 cut(s) 99, 177, 195
BfmI CTRYAG 1 cut(s) 113
BfuAI ACCTGC 1 cut(s) 287
BmcAI AGTACT 1 cut(s) 175
BmeT110I CYCGRG 1 cut(s) 166
BmsI GCATC 1 cut(s) 194
BplI GAGNNNNNCTC 4 cut(s) 144, 176, 235, 267
BpmI CTGGAG 1 cut(s) 171
BsaHI GRCGYC 1 cut(s) 239
BsaJI CCNNGG 1 cut(s) 242
BsaWI WCCGGW 1 cut(s) 253
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bse1I ACTGG 1 cut(s) 133
BseDI CCNNGG 1 cut(s) 242
BseMII CTCAG 2 cut(s) 175, 179
BseNI ACTGG 1 cut(s) 133
BseYI CCCAGC 1 cut(s) 272
BsiHKCI CYCGRG 1 cut(s) 166
BsiSI CCGG 2 cut(s) 254, 284
BslFI GGGAC 1 cut(s) 148
BsmAI GTCTC 2 cut(s) 164, 285
BsmFI GGGAC 1 cut(s) 148
BsoBI CYCGRG 1 cut(s) 166
BspCNI CTCAG 2 cut(s) 174, 180
BspMI ACCTGC 1 cut(s) 287
BsrI ACTGG 1 cut(s) 133
BssECI CCNNGG 1 cut(s) 242
BssNI GRCGYC 1 cut(s) 239
Bst4CI ACNGT 4 cut(s) 73, 117, 124, 312
BstACI GRCGYC 1 cut(s) 239
BstDEI CTNAG 4 cut(s) 62, 161, 188, 200
BstMAI GTCTC 2 cut(s) 164, 285
BstMWI GCNNNNNNNGC 1 cut(s) 293
BstSFI CTRYAG 1 cut(s) 113
BtsIMutI CAGTG 3 cut(s) 78, 129, 308
BveI ACCTGC 1 cut(s) 287
CaiI CAGNNNCTG 1 cut(s) 128
CseI GACGC 1 cut(s) 247
Csp6I GTAC 2 cut(s) 118, 174
CviJI RGCY 6 cut(s) 41, 56, 98, 112, 165, 272
CviKI_1 RGCY 6 cut(s) 41, 56, 98, 112, 165, 272
CviQI GTAC 2 cut(s) 118, 174
DdeI CTNAG 4 cut(s) 62, 161, 188, 200
Eco32I GATATC 1 cut(s) 147
Eco88I CYCGRG 1 cut(s) 166
EcoRV GATATC 1 cut(s) 147
FaiI YATR 2 cut(s) 95, 322
FaqI GGGAC 1 cut(s) 148
FspBI CTAG 3 cut(s) 99, 177, 195
GsaI CCCAGC 1 cut(s) 276
GsuI CTGGAG 1 cut(s) 171
HapII CCGG 2 cut(s) 254, 284
HgaI GACGC 1 cut(s) 247
Hin1I GRCGYC 1 cut(s) 239
HinfI GANTC 2 cut(s) 157, 215
HpaII CCGG 2 cut(s) 254, 284
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 1 cut(s) 120
Hpy188I TCNGA 1 cut(s) 189
Hpy188III TCNNGA 1 cut(s) 150
Hpy8I GTNNAC 1 cut(s) 120
HpyAV CCTTC 2 cut(s) 73, 133
HpyCH4III ACNGT 4 cut(s) 73, 117, 124, 312
HpyCH4V TGCA 3 cut(s) 106, 207, 221
HpyF10VI GCNNNNNNNGC 1 cut(s) 293
HpyF3I CTNAG 4 cut(s) 62, 161, 188, 200
Hsp92I GRCGYC 1 cut(s) 239
LmnI GCTCC 1 cut(s) 109
LpnPI CCDG 9 cut(s) 66, 92, 114, 135, 258, 267, 282, 282, 297
LweI GCATC 1 cut(s) 194
MaeI CTAG 3 cut(s) 99, 177, 195
MaeIII GTNAC 2 cut(s) 124, 306
MboII GAAGA 2 cut(s) 43, 88
MlyI GAGTC 1 cut(s) 166
MnlI CCTC 4 cut(s) 21, 54, 183, 237
MseI TTAA 2 cut(s) 228, 325
MspA1I CMGCKG 1 cut(s) 272
MspI CCGG 2 cut(s) 254, 284
MwoI GCNNNNNNNGC 1 cut(s) 293
NmeAIII GCCGAG 1 cut(s) 267
NmuCI GTSAC 2 cut(s) 124, 306
PfeI GAWTC 1 cut(s) 215
PleI GAGTC 1 cut(s) 165
PpsI GAGTC 1 cut(s) 165
PspFI CCCAGC 1 cut(s) 272
PstNI CAGNNNCTG 1 cut(s) 128
PvuII CAGCTG 1 cut(s) 272
RsaI GTAC 2 cut(s) 119, 175
RsaNI GTAC 2 cut(s) 118, 174
SaqAI TTAA 2 cut(s) 228, 325
ScaI AGTACT 1 cut(s) 175
SchI GAGTC 1 cut(s) 166
SetI ASST 9 cut(s) 58, 84, 92, 104, 114, 144, 235, 274, 301
SfaNI GCATC 1 cut(s) 194
SfcI CTRYAG 1 cut(s) 113
SpeI ACTAGT 1 cut(s) 194
SspMI CTAG 3 cut(s) 99, 177, 195
TaaI ACNGT 4 cut(s) 73, 117, 124, 312
TatI WGTACW 2 cut(s) 117, 173
TfiI GAWTC 1 cut(s) 215
Tru1I TTAA 2 cut(s) 228, 325
Tru9I TTAA 2 cut(s) 228, 325
TscAI CASTG 3 cut(s) 78, 129, 315
TseFI GTSAC 2 cut(s) 124, 306
Tsp45I GTSAC 2 cut(s) 124, 306
TspRI CASTG 3 cut(s) 78, 129, 315
XspI CTAG 3 cut(s) 99, 177, 195
ZrmI AGTACT 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.