Rh3DG366500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
45921981 .. 45922289
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG366500.1

Sequence Viewer

Length: 309 bp
ATGCGTATAGCAGGATCTTTTCCGAGTGTCACTCATGCTCATAAGGTTGGAGTCTTTGCGTTCTATAGAGTTTATGTTTGTAGGTTGTTCTTCAATTTCTATTATGTTGTCCTTGATGTTTCTATGCCTGTGGTCTTTGCATATGGGTGTCTACCCTTAAACAATAAGATCAGAGTCAAAAGAAAACGATTTCAGTTGACGGCGGCTGTACGAGCACAGCAGCGTGGCTCAGTGGTGCTCTTAGAAGGTGGCAAAGGAATGGCAGGTTACAGCTCGCAAAGCTTAATCAAGGAACATGGACTAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

102

Amino Acids

11.49

Weight (kDa)

10.34

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 254
AccI GTMKAC 1 cut(s) 151
AciI CCGC 1 cut(s) 203
AclWI GGATC 1 cut(s) 22
AfaI GTAC 1 cut(s) 210
AgsI TTSAA 1 cut(s) 94
AluBI AGCT 2 cut(s) 273, 282
AluI AGCT 2 cut(s) 273, 282
Alw21I GWGCWC 2 cut(s) 217, 240
AlwI GGATC 1 cut(s) 22
ApeKI GCWGC 1 cut(s) 220
Bbv12I GWGCWC 2 cut(s) 217, 240
BbvI GCAGC 1 cut(s) 232
BceAI ACGGC 1 cut(s) 216
BfmI CTRYAG 1 cut(s) 64
BfuAI ACCTGC 1 cut(s) 254
BisI GCNGC 2 cut(s) 204, 221
BlsI GCNGC 2 cut(s) 205, 222
BplI GAGNNNNNCTC 2 cut(s) 16, 48
BseMII CTCAG 1 cut(s) 243
BseXI GCAGC 1 cut(s) 232
BsiHKAI GWGCWC 2 cut(s) 217, 240
Bsp1286I GDGCHC 2 cut(s) 217, 240
Bsp143I GATC 2 cut(s) 14, 168
BspACI CCGC 1 cut(s) 203
BspCNI CTCAG 1 cut(s) 242
BspMI ACCTGC 1 cut(s) 254
BspPI GGATC 1 cut(s) 22
BssMI GATC 2 cut(s) 14, 168
BstC8I GCNNGC 1 cut(s) 275
BstDEI CTNAG 2 cut(s) 229, 241
BstKTI GATC 2 cut(s) 17, 171
BstMBI GATC 2 cut(s) 14, 168
BstMWI GCNNNNNNNGC 2 cut(s) 212, 279
BstSFI CTRYAG 1 cut(s) 64
BstV1I GCAGC 1 cut(s) 232
BstX2I RGATCY 1 cut(s) 14
BstYI RGATCY 1 cut(s) 14
BtsIMutI CAGTG 1 cut(s) 237
BveI ACCTGC 1 cut(s) 254
Cac8I GCNNGC 1 cut(s) 275
Csp6I GTAC 1 cut(s) 209
CviAII CATG 2 cut(s) 35, 296
CviJI RGCY 4 cut(s) 206, 228, 273, 282
CviKI_1 RGCY 4 cut(s) 206, 228, 273, 282
CviQI GTAC 1 cut(s) 209
DdeI CTNAG 2 cut(s) 229, 241
DpnI GATC 2 cut(s) 16, 170
DpnII GATC 2 cut(s) 14, 168
FaeI CATG 2 cut(s) 38, 299
FatI CATG 2 cut(s) 34, 295
FauNDI CATATG 1 cut(s) 142
FblI GTMKAC 1 cut(s) 151
Fnu4HI GCNGC 2 cut(s) 204, 221
Fsp4HI GCNGC 2 cut(s) 204, 221
GluI GCNGC 2 cut(s) 204, 221
Hin1II CATG 2 cut(s) 38, 299
HincII GTYRAC 1 cut(s) 198
HindII GTYRAC 1 cut(s) 198
HindIII AAGCTT 1 cut(s) 280
HinfI GANTC 2 cut(s) 51, 174
Hpy166II GTNNAC 2 cut(s) 152, 198
Hpy188I TCNGA 2 cut(s) 24, 173
Hpy8I GTNNAC 2 cut(s) 152, 198
HpyAV CCTTC 1 cut(s) 239
HpyCH4V TGCA 1 cut(s) 140
HpyF10VI GCNNNNNNNGC 2 cut(s) 212, 279
HpyF3I CTNAG 2 cut(s) 229, 241
Hsp92II CATG 2 cut(s) 38, 299
Kzo9I GATC 2 cut(s) 14, 168
LpnPI CCDG 2 cut(s) 141, 249
Lsp1109I GCAGC 1 cut(s) 232
MaeIII GTNAC 2 cut(s) 28, 266
MalI GATC 2 cut(s) 16, 170
MboI GATC 2 cut(s) 14, 168
MboII GAAGA 1 cut(s) 82
MflI RGATCY 1 cut(s) 14
MhlI GDGCHC 2 cut(s) 217, 240
MluCI AATT 1 cut(s) 94
MlyI GAGTC 2 cut(s) 60, 183
MmeI TCCRAC 1 cut(s) 28
MseI TTAA 2 cut(s) 158, 284
MslI CAYNNNNRTG 1 cut(s) 145
MwoI GCNNNNNNNGC 2 cut(s) 212, 279
NdeI CATATG 1 cut(s) 142
NdeII GATC 2 cut(s) 14, 168
NlaIII CATG 2 cut(s) 38, 299
NmuCI GTSAC 1 cut(s) 28
PkrI GCNGC 2 cut(s) 205, 222
PleI GAGTC 2 cut(s) 59, 182
PpsI GAGTC 2 cut(s) 59, 182
PsuI RGATCY 1 cut(s) 14
RsaI GTAC 1 cut(s) 210
RsaNI GTAC 1 cut(s) 209
RseI CAYNNNNRTG 1 cut(s) 145
SaqAI TTAA 2 cut(s) 158, 284
SatI GCNGC 2 cut(s) 204, 221
Sau3AI GATC 2 cut(s) 14, 168
SchI GAGTC 2 cut(s) 60, 183
SduI GDGCHC 2 cut(s) 217, 240
SetI ASST 6 cut(s) 48, 86, 250, 268, 275, 284
SfcI CTRYAG 1 cut(s) 64
SmiMI CAYNNNNRTG 1 cut(s) 145
Sse9I AATT 1 cut(s) 94
SsiI CCGC 1 cut(s) 203
TasI AATT 1 cut(s) 94
TauI GCSGC 1 cut(s) 206
Tru1I TTAA 2 cut(s) 158, 284
Tru9I TTAA 2 cut(s) 158, 284
TscAI CASTG 1 cut(s) 237
TseFI GTSAC 1 cut(s) 28
TseI GCWGC 1 cut(s) 220
Tsp45I GTSAC 1 cut(s) 28
TspRI CASTG 1 cut(s) 237
XmiI GTMKAC 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.