DNA-directed RNA polymerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00170 |
| malus_domestica | MD01G1014400.v1.1 |
| pyrus_communis | pycom12397g00020 pycom12397g00340 |
| rosa_chinensis | RchiOBHm_Chr4g0421201 |
| rosa_laevigata | RLG00000000048 RLG00000000088 RLG00000000117 RLG00000000174 RLG00000000232 RLG00000000233 RLG00000000247 RLG00000000283 RLG00000000313 RLG00000000317 RLG00000000339 |
| rosa_multiflora | Rmu_sc0001741.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00119090 Rroxscaffold_2G00119100 |
| rosa_rugosa | RorugMtG0001800 |
| rosa_samantha | Rh2AG294100 Rh2AG294200 Rh2DG057700 Rh2DG318000 Rh2DG318100 Rh4CG233400 Rh4CG244200 Rh7BG354800 Rh7CG382200 |
| rosa_wichuraiana | Rw4G006960 Rw4G006970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 230 |
| AclWI | GGATC | 2 cut(s) | 74, 211 |
| AcsI | RAATTY | 1 cut(s) | 185 |
| AfaI | GTAC | 1 cut(s) | 170 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 38 |
| AgsI | TTSAA | 2 cut(s) | 26, 141 |
| AlwI | GGATC | 2 cut(s) | 74, 211 |
| ApoI | RAATTY | 1 cut(s) | 185 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 100 |
| BanI | GGYRCC | 1 cut(s) | 230 |
| BccI | CCATC | 1 cut(s) | 15 |
| BmiI | GGNNCC | 1 cut(s) | 232 |
| BmsI | GCATC | 1 cut(s) | 187 |
| BsaJI | CCNNGG | 2 cut(s) | 172, 243 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 38 |
| BseDI | CCNNGG | 2 cut(s) | 172, 243 |
| BseGI | GGATG | 1 cut(s) | 7 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BseRI | GAGGAG | 1 cut(s) | 189 |
| BshNI | GGYRCC | 1 cut(s) | 230 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BsmI | GAATGC | 1 cut(s) | 136 |
| Bsp143I | GATC | 2 cut(s) | 79, 203 |
| Bsp19I | CCATGG | 1 cut(s) | 243 |
| BspLI | GGNNCC | 1 cut(s) | 232 |
| BspPI | GGATC | 2 cut(s) | 74, 211 |
| BspT107I | GGYRCC | 1 cut(s) | 230 |
| BssECI | CCNNGG | 2 cut(s) | 172, 243 |
| BssMI | GATC | 2 cut(s) | 79, 203 |
| BssT1I | CCWWGG | 1 cut(s) | 243 |
| Bst6I | CTCTTC | 1 cut(s) | 147 |
| BstDSI | CCRYGG | 1 cut(s) | 243 |
| BstF5I | GGATG | 1 cut(s) | 7 |
| BstKTI | GATC | 2 cut(s) | 82, 206 |
| BstMBI | GATC | 2 cut(s) | 79, 203 |
| BtgI | CCRYGG | 1 cut(s) | 243 |
| BtsCI | GGATG | 1 cut(s) | 7 |
| Csp6I | GTAC | 1 cut(s) | 169 |
| CviAII | CATG | 2 cut(s) | 227, 244 |
| CviQI | GTAC | 1 cut(s) | 169 |
| DpnI | GATC | 2 cut(s) | 81, 205 |
| DpnII | GATC | 2 cut(s) | 79, 203 |
| Eam1104I | CTCTTC | 1 cut(s) | 147 |
| EarI | CTCTTC | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 1 cut(s) | 243 |
| EcoT14I | CCWWGG | 1 cut(s) | 243 |
| ErhI | CCWWGG | 1 cut(s) | 243 |
| FaeI | CATG | 2 cut(s) | 230, 247 |
| FaiI | YATR | 4 cut(s) | 120, 228, 245, 267 |
| FatI | CATG | 2 cut(s) | 226, 243 |
| Hin1II | CATG | 2 cut(s) | 230, 247 |
| HinfI | GANTC | 2 cut(s) | 177, 239 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 105 |
| Hpy99I | CGWCG | 2 cut(s) | 80, 239 |
| HpyCH4V | TGCA | 1 cut(s) | 136 |
| Hsp92II | CATG | 2 cut(s) | 230, 247 |
| Kzo9I | GATC | 2 cut(s) | 79, 203 |
| LpnPI | CCDG | 2 cut(s) | 90, 186 |
| LweI | GCATC | 1 cut(s) | 187 |
| MaeIII | GTNAC | 1 cut(s) | 213 |
| MalI | GATC | 2 cut(s) | 81, 205 |
| MboI | GATC | 2 cut(s) | 79, 203 |
| MboII | GAAGA | 2 cut(s) | 105, 164 |
| MluCI | AATT | 4 cut(s) | 108, 123, 162, 185 |
| MlyI | GAGTC | 1 cut(s) | 186 |
| MnlI | CCTC | 4 cut(s) | 93, 148, 167, 228 |
| MroXI | GAANNNNTTC | 1 cut(s) | 100 |
| MseI | TTAA | 2 cut(s) | 161, 189 |
| Mva1269I | GAATGC | 1 cut(s) | 136 |
| NcoI | CCATGG | 1 cut(s) | 243 |
| NdeII | GATC | 2 cut(s) | 79, 203 |
| NlaIII | CATG | 2 cut(s) | 230, 247 |
| NlaIV | GGNNCC | 1 cut(s) | 232 |
| PctI | GAATGC | 1 cut(s) | 136 |
| PdmI | GAANNNNTTC | 1 cut(s) | 100 |
| PfeI | GAWTC | 1 cut(s) | 239 |
| PleI | GAGTC | 1 cut(s) | 185 |
| PpsI | GAGTC | 1 cut(s) | 185 |
| PspN4I | GGNNCC | 1 cut(s) | 232 |
| RsaI | GTAC | 1 cut(s) | 170 |
| RsaNI | GTAC | 1 cut(s) | 169 |
| SaqAI | TTAA | 2 cut(s) | 161, 189 |
| Sau3AI | GATC | 2 cut(s) | 79, 203 |
| SchI | GAGTC | 1 cut(s) | 186 |
| SetI | ASST | 1 cut(s) | 220 |
| SfaNI | GCATC | 1 cut(s) | 187 |
| SgeI | CNNG | 9 cut(s) | 23, 45, 77, 117, 185, 213, 239, 256, 262 |
| Sse9I | AATT | 4 cut(s) | 108, 123, 162, 185 |
| StyI | CCWWGG | 1 cut(s) | 243 |
| TaqI | TCGA | 2 cut(s) | 20, 75 |
| TasI | AATT | 4 cut(s) | 108, 123, 162, 185 |
| TfiI | GAWTC | 1 cut(s) | 239 |
| Tru1I | TTAA | 2 cut(s) | 161, 189 |
| Tru9I | TTAA | 2 cut(s) | 161, 189 |
| XapI | RAATTY | 1 cut(s) | 185 |
| XmnI | GAANNNNTTC | 1 cut(s) | 100 |