DNA-directed RNA polymerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00170 |
| malus_domestica | MD01G1014400.v1.1 |
| pyrus_communis | pycom12397g00020 pycom12397g00340 |
| rosa_chinensis | RchiOBHm_Chr4g0421201 |
| rosa_laevigata | RLG00000000048 RLG00000000088 RLG00000000117 RLG00000000174 RLG00000000232 RLG00000000233 RLG00000000247 RLG00000000283 RLG00000000313 RLG00000000317 RLG00000000339 |
| rosa_multiflora | Rmu_sc0001741.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00119090 Rroxscaffold_2G00119100 |
| rosa_rugosa | RorugMtG0001800 |
| rosa_samantha | Rh2AG294100 Rh2AG294200 Rh2DG057700 Rh2DG318000 Rh2DG318100 Rh4CG233400 Rh4CG244200 Rh7BG354800 Rh7CG382200 |
| rosa_wichuraiana | Rw4G006960 Rw4G006970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 3917 |
| AccB1I | GGYRCC | 2 cut(s) | 662, 3917 |
| AccII | CGCG | 5 cut(s) | 278, 772, 1272, 1274, 3720 |
| AclI | AACGTT | 2 cut(s) | 1497, 3888 |
| AcoI | YGGCCR | 1 cut(s) | 907 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 203, 695, 923, 1070, 1757, 2405, 3205, 3948 |
| AflIII | ACRYGT | 3 cut(s) | 1051, 1109, 1115 |
| AgeI | ACCGGT | 1 cut(s) | 1019 |
| AjiI | CACGTC | 1 cut(s) | 1118 |
| AjnI | CCWGG | 6 cut(s) | 930, 2128, 2176, 2325, 3274, 3576 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3270, 3302 |
| AluBI | AGCT | 7 cut(s) | 407, 950, 1605, 3269, 3517, 3704, 3842 |
| AluI | AGCT | 7 cut(s) | 407, 950, 1605, 3269, 3517, 3704, 3842 |
| Alw26I | GTCTC | 1 cut(s) | 3152 |
| Ama87I | CYCGRG | 3 cut(s) | 1973, 3149, 3825 |
| AoxI | GGCC | 4 cut(s) | 12, 907, 2493, 2881 |
| ApeKI | GCWGC | 2 cut(s) | 3697, 3842 |
| AseI | ATTAAT | 1 cut(s) | 77 |
| AsiGI | ACCGGT | 1 cut(s) | 1019 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 627, 1819, 2185, 2682 |
| Asp718I | GGTACC | 1 cut(s) | 3917 |
| AspLEI | GCGC | 6 cut(s) | 1274, 1372, 3512, 3529, 3720, 3722 |
| AspS9I | GGNCC | 8 cut(s) | 12, 367, 767, 2065, 2439, 2494, 2882, 4021 |
| AsuC2I | CCSGG | 3 cut(s) | 987, 3678, 3851 |
| AsuHPI | GGTGA | 2 cut(s) | 3374, 3666 |
| AsuII | TTCGAA | 4 cut(s) | 787, 856, 1309, 3047 |
| AvaI | CYCGRG | 3 cut(s) | 1973, 3149, 3825 |
| AvaII | GGWCC | 5 cut(s) | 367, 767, 2065, 2439, 4021 |
| AxyI | CCTNAGG | 2 cut(s) | 1953, 2887 |
| BaeGI | GKGCMC | 2 cut(s) | 992, 3942 |
| BaeI | ACNNNNGTAYC | 8 cut(s) | 564, 597, 1336, 1369, 1990, 2023, 3315, 3348 |
| BamHI | GGATCC | 2 cut(s) | 463, 2329 |
| BanI | GGYRCC | 2 cut(s) | 662, 3917 |
| BanII | GRGCYC | 3 cut(s) | 556, 917, 1063 |
| BbsI | GAAGAC | 2 cut(s) | 1971, 3371 |
| BbvI | GCAGC | 2 cut(s) | 3684, 3829 |
| BccI | CCATC | 5 cut(s) | 38, 264, 2131, 2813, 3647 |
| BceAI | ACGGC | 1 cut(s) | 767 |
| BciT130I | CCWGG | 6 cut(s) | 932, 2130, 2178, 2327, 3276, 3578 |
| BciVI | GTATCC | 1 cut(s) | 565 |
| BclI | TGATCA | 1 cut(s) | 1552 |
| BcnI | CCSGG | 3 cut(s) | 987, 3678, 3851 |
| BcoDI | GTCTC | 1 cut(s) | 3152 |
| BfaI | CTAG | 7 cut(s) | 116, 212, 408, 1533, 2354, 3437, 3896 |
| BfmI | CTRYAG | 4 cut(s) | 951, 1044, 1845, 3522 |
| BfoI | RGCGCY | 1 cut(s) | 3513 |
| BfuI | GTATCC | 1 cut(s) | 565 |
| BisI | GCNGC | 2 cut(s) | 3698, 3843 |
| BlpI | GCTNAGC | 1 cut(s) | 3513 |
| BlsI | GCNGC | 2 cut(s) | 3699, 3844 |
| Bme1390I | CCNGG | 9 cut(s) | 932, 987, 2130, 2178, 2327, 3276, 3578, 3678, 3851 |
| Bme18I | GGWCC | 5 cut(s) | 367, 767, 2065, 2439, 4021 |
| BmeT110I | CYCGRG | 3 cut(s) | 1973, 3149, 3825 |
| BmgBI | CACGTC | 1 cut(s) | 1118 |
| BmgT120I | GGNCC | 8 cut(s) | 12, 367, 767, 2065, 2439, 2494, 2882, 4021 |
| BmiI | GGNNCC | 9 cut(s) | 49, 369, 465, 553, 664, 914, 2331, 2884, 3919 |
| BmrFI | CCNGG | 9 cut(s) | 932, 987, 2130, 2178, 2327, 3276, 3578, 3678, 3851 |
| BmrI | ACTGGG | 1 cut(s) | 2467 |
| BmsI | GCATC | 9 cut(s) | 211, 428, 583, 693, 764, 1135, 2172, 3078, 3782 |
| BmuI | ACTGGG | 1 cut(s) | 2467 |
| BpiI | GAAGAC | 2 cut(s) | 1971, 3371 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 904, 936 |
| BpmI | CTGGAG | 4 cut(s) | 1369, 2133, 2151, 3258 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3513 |
| Bpu14I | TTCGAA | 4 cut(s) | 787, 856, 1309, 3047 |
| BpuEI | CTTGAG | 1 cut(s) | 408 |
| BpuMI | CCSGG | 3 cut(s) | 987, 3678, 3851 |
| Bsa29I | ATCGAT | 5 cut(s) | 42, 820, 1936, 3428, 3861 |
| BsaAI | YACGTR | 4 cut(s) | 509, 647, 1112, 1240 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1362, 1485 |
| BsaJI | CCNNGG | 8 cut(s) | 670, 1891, 2325, 2673, 3491, 3576, 3577, 3850 |
| BsaWI | WCCGGW | 2 cut(s) | 1019, 3920 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3270, 3300 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 203, 695, 923, 1070, 1757, 2405, 3205, 3948 |
| Bse118I | RCCGGY | 1 cut(s) | 1019 |
| Bse1I | ACTGG | 4 cut(s) | 15, 380, 1352, 2462 |
| Bse21I | CCTNAGG | 2 cut(s) | 1953, 2887 |
| Bse3DI | GCAATG | 2 cut(s) | 777, 2333 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1362, 1485 |
| BseBI | CCWGG | 6 cut(s) | 932, 2130, 2178, 2327, 3276, 3578 |
| BseCI | ATCGAT | 5 cut(s) | 42, 820, 1936, 3428, 3861 |
| BseDI | CCNNGG | 8 cut(s) | 670, 1891, 2325, 2673, 3491, 3576, 3577, 3850 |
| BseJI | GATNNNNATC | 2 cut(s) | 1362, 1485 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 203, 695, 923, 1070, 1757, 2405, 3205, 3948 |
| BseMI | GCAATG | 2 cut(s) | 777, 2333 |
| BseMII | CTCAG | 5 cut(s) | 1254, 1344, 1944, 2560, 3504 |
| BseNI | ACTGG | 4 cut(s) | 15, 380, 1352, 2462 |
| BsePI | GCGCGC | 1 cut(s) | 3718 |
| BseRI | GAGGAG | 1 cut(s) | 1908 |
| BseSI | GKGCMC | 2 cut(s) | 992, 3942 |
| BseXI | GCAGC | 2 cut(s) | 3684, 3829 |
| BsgI | GTGCAG | 3 cut(s) | 1465, 1476, 3082 |
| Bsh1236I | CGCG | 5 cut(s) | 278, 772, 1272, 1274, 3720 |
| BshFI | GGCC | 4 cut(s) | 14, 909, 2495, 2883 |
| BshNI | GGYRCC | 2 cut(s) | 662, 3917 |
| BshTI | ACCGGT | 1 cut(s) | 1019 |
| BshVI | ATCGAT | 5 cut(s) | 42, 820, 1936, 3428, 3861 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1973, 3149, 3825 |
| BsiSI | CCGG | 8 cut(s) | 707, 910, 986, 1020, 2415, 3678, 3850, 3921 |
| BsiWI | CGTACG | 1 cut(s) | 2720 |
| BslFI | GGGAC | 2 cut(s) | 1445, 2474 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 203, 695, 923, 1070, 1757, 2405, 3205, 3948 |
| BsmAI | GTCTC | 1 cut(s) | 3152 |
| BsmFI | GGGAC | 2 cut(s) | 1445, 2474 |
| BsmI | GAATGC | 1 cut(s) | 1855 |
| BsnI | GGCC | 4 cut(s) | 14, 909, 2495, 2883 |
| BsoBI | CYCGRG | 3 cut(s) | 1973, 3149, 3825 |
| Bsp119I | TTCGAA | 4 cut(s) | 787, 856, 1309, 3047 |
| Bsp1286I | GDGCHC | 5 cut(s) | 556, 917, 992, 1063, 3942 |
| Bsp1407I | TGTACA | 2 cut(s) | 271, 1393 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3513 |
| BspANI | GGCC | 4 cut(s) | 14, 909, 2495, 2883 |
| BspCNI | CTCAG | 5 cut(s) | 1255, 1343, 1945, 2559, 3505 |
| BspDI | ATCGAT | 5 cut(s) | 42, 820, 1936, 3428, 3861 |
| BspFNI | CGCG | 5 cut(s) | 278, 772, 1272, 1274, 3720 |
| BspLI | GGNNCC | 9 cut(s) | 49, 369, 465, 553, 664, 914, 2331, 2884, 3919 |
| BspMAI | CTGCAG | 1 cut(s) | 1048 |
| BspT104I | TTCGAA | 4 cut(s) | 787, 856, 1309, 3047 |
| BspT107I | GGYRCC | 2 cut(s) | 662, 3917 |
| BsrDI | GCAATG | 2 cut(s) | 777, 2333 |
| BsrFI | RCCGGY | 1 cut(s) | 1019 |
| BsrGI | TGTACA | 2 cut(s) | 271, 1393 |
| BsrI | ACTGG | 4 cut(s) | 15, 380, 1352, 2462 |
| BssAI | RCCGGY | 1 cut(s) | 1019 |
| BssECI | CCNNGG | 8 cut(s) | 670, 1891, 2325, 2673, 3491, 3576, 3577, 3850 |
| BssHII | GCGCGC | 1 cut(s) | 3718 |
| BssT1I | CCWWGG | 2 cut(s) | 2673, 3491 |
| Bst2UI | CCWGG | 6 cut(s) | 932, 2130, 2178, 2327, 3276, 3578 |
| Bst4CI | ACNGT | 4 cut(s) | 667, 1846, 2300, 3286 |
| Bst6I | CTCTTC | 1 cut(s) | 2484 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3842 |
| BstAUI | TGTACA | 2 cut(s) | 271, 1393 |
| BstBAI | YACGTR | 4 cut(s) | 509, 647, 1112, 1240 |
| BstBI | TTCGAA | 4 cut(s) | 787, 856, 1309, 3047 |
| BstC8I | GCNNGC | 3 cut(s) | 556, 3702, 3720 |
| BstFNI | CGCG | 5 cut(s) | 278, 772, 1272, 1274, 3720 |
| BstH2I | RGCGCY | 1 cut(s) | 3513 |
| BstHHI | GCGC | 6 cut(s) | 1274, 1372, 3512, 3529, 3720, 3722 |
| BstMAI | GTCTC | 1 cut(s) | 3152 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 3842 |
| BstNI | CCWGG | 6 cut(s) | 932, 2130, 2178, 2327, 3276, 3578 |
| BstNSI | RCATGY | 1 cut(s) | 1055 |
| BstSCI | CCNGG | 9 cut(s) | 930, 985, 2128, 2176, 2325, 3274, 3576, 3676, 3849 |
| BstSFI | CTRYAG | 4 cut(s) | 951, 1044, 1845, 3522 |
| BstSLI | GKGCMC | 2 cut(s) | 992, 3942 |
| BstSNI | TACGTA | 2 cut(s) | 647, 1240 |
| BstUI | CGCG | 5 cut(s) | 278, 772, 1272, 1274, 3720 |
| BstV1I | GCAGC | 2 cut(s) | 3684, 3829 |
| BstV2I | GAAGAC | 2 cut(s) | 1971, 3371 |
| BstX2I | RGATCY | 6 cut(s) | 463, 888, 2329, 3555, 3572, 3588 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 263, 2129 |
| BstYI | RGATCY | 6 cut(s) | 463, 888, 2329, 3555, 3572, 3588 |
| Bsu15I | ATCGAT | 5 cut(s) | 42, 820, 1936, 3428, 3861 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1953, 2887 |
| BsuI | GTATCC | 1 cut(s) | 565 |
| BsuRI | GGCC | 4 cut(s) | 14, 909, 2495, 2883 |
| BsuTUI | ATCGAT | 5 cut(s) | 42, 820, 1936, 3428, 3861 |
| BtgZI | GCGATG | 1 cut(s) | 787 |
| BtrI | CACGTC | 1 cut(s) | 1118 |
| BtsI | GCAGTG | 1 cut(s) | 150 |
| BtsIMutI | CAGTG | 3 cut(s) | 150, 1345, 1459 |
| Cac8I | GCNNGC | 3 cut(s) | 556, 3702, 3720 |
| CfoI | GCGC | 6 cut(s) | 1274, 1372, 3512, 3529, 3720, 3722 |
| Cfr10I | RCCGGY | 1 cut(s) | 1019 |
| Cfr13I | GGNCC | 8 cut(s) | 12, 367, 767, 2065, 2439, 2494, 2882, 4021 |
| ClaI | ATCGAT | 5 cut(s) | 42, 820, 1936, 3428, 3861 |
| CsiI | ACCWGGT | 1 cut(s) | 930 |
| CspAI | ACCGGT | 1 cut(s) | 1019 |
| CviAII | CATG | 7 cut(s) | 923, 1052, 1121, 1367, 1682, 3290, 4067 |
| DraI | TTTAAA | 3 cut(s) | 1297, 2037, 2991 |
| EaeI | YGGCCR | 1 cut(s) | 907 |
| Eam1104I | CTCTTC | 1 cut(s) | 2484 |
| EarI | CTCTTC | 1 cut(s) | 2484 |
| Eco105I | TACGTA | 2 cut(s) | 647, 1240 |
| Eco130I | CCWWGG | 2 cut(s) | 2673, 3491 |
| Eco24I | GRGCYC | 3 cut(s) | 556, 917, 1063 |
| Eco32I | GATATC | 2 cut(s) | 602, 2119 |
| Eco47I | GGWCC | 5 cut(s) | 367, 767, 2065, 2439, 4021 |
| Eco81I | CCTNAGG | 2 cut(s) | 1953, 2887 |
| Eco88I | CYCGRG | 3 cut(s) | 1973, 3149, 3825 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2882 |
| EcoRI | GAATTC | 4 cut(s) | 2682, 3049, 3477, 3486 |
| EcoRII | CCWGG | 6 cut(s) | 930, 2128, 2176, 2325, 3274, 3576 |
| EcoRV | GATATC | 2 cut(s) | 602, 2119 |
| EcoT14I | CCWWGG | 2 cut(s) | 2673, 3491 |
| EcoT22I | ATGCAT | 2 cut(s) | 421, 779 |
| EcoT38I | GRGCYC | 3 cut(s) | 556, 917, 1063 |
| ErhI | CCWWGG | 2 cut(s) | 2673, 3491 |
| FaeI | CATG | 7 cut(s) | 926, 1055, 1124, 1370, 1685, 3293, 4070 |
| FaqI | GGGAC | 2 cut(s) | 1445, 2474 |
| FatI | CATG | 7 cut(s) | 922, 1051, 1120, 1366, 1681, 3289, 4066 |
| FauI | CCCGC | 4 cut(s) | 563, 958, 1267, 2331 |
| FauNDI | CATATG | 1 cut(s) | 387 |
| FbaI | TGATCA | 1 cut(s) | 1552 |
| Fnu4HI | GCNGC | 2 cut(s) | 3698, 3843 |
| FriOI | GRGCYC | 3 cut(s) | 556, 917, 1063 |
| Fsp4HI | GCNGC | 2 cut(s) | 3698, 3843 |
| FspBI | CTAG | 7 cut(s) | 116, 212, 408, 1533, 2354, 3437, 3896 |
| GlaI | GCGC | 6 cut(s) | 1273, 1371, 3511, 3528, 3719, 3721 |
| GluI | GCNGC | 2 cut(s) | 3698, 3843 |
| GsuI | CTGGAG | 4 cut(s) | 1369, 2133, 2151, 3258 |
| HaeII | RGCGCY | 1 cut(s) | 3513 |
| HaeIII | GGCC | 4 cut(s) | 14, 909, 2495, 2883 |
| HapII | CCGG | 8 cut(s) | 707, 910, 986, 1020, 2415, 3678, 3850, 3921 |
| HhaI | GCGC | 6 cut(s) | 1274, 1372, 3512, 3529, 3720, 3722 |
| Hin1II | CATG | 7 cut(s) | 926, 1055, 1124, 1370, 1685, 3293, 4070 |
| Hin6I | GCGC | 6 cut(s) | 1272, 1370, 3510, 3527, 3718, 3720 |
| HinP1I | GCGC | 6 cut(s) | 1272, 1370, 3510, 3527, 3718, 3720 |
| HpaII | CCGG | 8 cut(s) | 707, 910, 986, 1020, 2415, 3678, 3850, 3921 |
| HphI | GGTGA | 2 cut(s) | 3374, 3666 |
| Hpy166II | GTNNAC | 4 cut(s) | 274, 430, 1115, 4024 |
| Hpy8I | GTNNAC | 4 cut(s) | 274, 430, 1115, 4024 |
| Hpy99I | CGWCG | 2 cut(s) | 592, 1799 |
| HpyAV | CCTTC | 6 cut(s) | 207, 506, 1074, 1476, 1511, 3311 |
| HpyCH4III | ACNGT | 4 cut(s) | 667, 1846, 2300, 3286 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 3842 |
| Hsp92II | CATG | 7 cut(s) | 926, 1055, 1124, 1370, 1685, 3293, 4070 |
| HspAI | GCGC | 6 cut(s) | 1272, 1370, 3510, 3527, 3718, 3720 |
| KpnI | GGTACC | 1 cut(s) | 3921 |
| Ksp22I | TGATCA | 1 cut(s) | 1552 |
| LmnI | GCTCC | 5 cut(s) | 404, 551, 912, 1277, 3278 |
| Lsp1109I | GCAGC | 2 cut(s) | 3684, 3829 |
| LweI | GCATC | 9 cut(s) | 211, 428, 583, 693, 764, 1135, 2172, 3078, 3782 |
| MabI | ACCWGGT | 1 cut(s) | 930 |
| MaeI | CTAG | 7 cut(s) | 116, 212, 408, 1533, 2354, 3437, 3896 |
| MaeIII | GTNAC | 6 cut(s) | 545, 1159, 1192, 2956, 3331, 3740 |
| MboII | GAAGA | 9 cut(s) | 1722, 1824, 1971, 1974, 2472, 2501, 3371, 3662, 3740 |
| MfeI | CAATTG | 1 cut(s) | 2212 |
| MflI | RGATCY | 6 cut(s) | 463, 888, 2329, 3555, 3572, 3588 |
| MhlI | GDGCHC | 5 cut(s) | 556, 917, 992, 1063, 3942 |
| MlyI | GAGTC | 8 cut(s) | 124, 694, 1322, 1657, 1905, 1985, 2800, 3227 |
| MmeI | TCCRAC | 5 cut(s) | 441, 570, 2176, 2613, 3437 |
| Mph1103I | ATGCAT | 2 cut(s) | 421, 779 |
| MroXI | GAANNNNTTC | 4 cut(s) | 627, 1819, 2185, 2682 |
| MslI | CAYNNNNRTG | 2 cut(s) | 261, 1020 |
| MspI | CCGG | 8 cut(s) | 707, 910, 986, 1020, 2415, 3678, 3850, 3921 |
| MspR9I | CCNGG | 9 cut(s) | 932, 987, 2130, 2178, 2327, 3276, 3578, 3678, 3851 |
| MunI | CAATTG | 1 cut(s) | 2212 |
| Mva1269I | GAATGC | 1 cut(s) | 1855 |
| MvaI | CCWGG | 6 cut(s) | 932, 2130, 2178, 2327, 3276, 3578 |
| MvnI | CGCG | 5 cut(s) | 278, 772, 1272, 1274, 3720 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 3842 |
| NciI | CCSGG | 3 cut(s) | 987, 3678, 3851 |
| NdeI | CATATG | 1 cut(s) | 387 |
| NlaIII | CATG | 7 cut(s) | 926, 1055, 1124, 1370, 1685, 3293, 4070 |
| NlaIV | GGNNCC | 9 cut(s) | 49, 369, 465, 553, 664, 914, 2331, 2884, 3919 |
| NmuCI | GTSAC | 1 cut(s) | 1192 |
| NsiI | ATGCAT | 2 cut(s) | 421, 779 |
| NspI | RCATGY | 1 cut(s) | 1055 |
| NspV | TTCGAA | 4 cut(s) | 787, 856, 1309, 3047 |
| PaeR7I | CTCGAG | 1 cut(s) | 3825 |
| PasI | CCCWGGG | 1 cut(s) | 3577 |
| PauI | GCGCGC | 1 cut(s) | 3718 |
| PciI | ACATGT | 1 cut(s) | 1051 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1245 |
| PctI | GAATGC | 1 cut(s) | 1855 |
| PdmI | GAANNNNTTC | 4 cut(s) | 627, 1819, 2185, 2682 |
| Pfl23II | CGTACG | 1 cut(s) | 2720 |
| PflFI | GACNNNGTC | 1 cut(s) | 932 |
| PfoI | TCCNGGA | 2 cut(s) | 2128, 3274 |
| PinAI | ACCGGT | 1 cut(s) | 1019 |
| PkrI | GCNGC | 2 cut(s) | 3699, 3844 |
| PleI | GAGTC | 8 cut(s) | 124, 693, 1322, 1656, 1904, 1984, 2799, 3227 |
| PpsI | GAGTC | 8 cut(s) | 124, 693, 1322, 1656, 1904, 1984, 2799, 3227 |
| Ppu21I | YACGTR | 4 cut(s) | 509, 647, 1112, 1240 |
| PscI | ACATGT | 1 cut(s) | 1051 |
| PshBI | ATTAAT | 1 cut(s) | 77 |
| Psp1406I | AACGTT | 2 cut(s) | 1497, 3888 |
| Psp6I | CCWGG | 6 cut(s) | 930, 2128, 2176, 2325, 3274, 3576 |
| PspGI | CCWGG | 6 cut(s) | 930, 2128, 2176, 2325, 3274, 3576 |
| PspLI | CGTACG | 1 cut(s) | 2720 |
| PspN4I | GGNNCC | 9 cut(s) | 49, 369, 465, 553, 664, 914, 2331, 2884, 3919 |
| PspPI | GGNCC | 8 cut(s) | 12, 367, 767, 2065, 2439, 2494, 2882, 4021 |
| PspXI | VCTCGAGB | 1 cut(s) | 3825 |
| PsrI | GAACNNNNNNTAC | 6 cut(s) | 850, 882, 1000, 1032, 2704, 2736 |
| PstI | CTGCAG | 1 cut(s) | 1048 |
| PsuI | RGATCY | 6 cut(s) | 463, 888, 2329, 3555, 3572, 3588 |
| PsyI | GACNNNGTC | 1 cut(s) | 932 |
| PteI | GCGCGC | 1 cut(s) | 3718 |
| RseI | CAYNNNNRTG | 2 cut(s) | 261, 1020 |
| SatI | GCNGC | 2 cut(s) | 3698, 3843 |
| Sau96I | GGNCC | 8 cut(s) | 12, 367, 767, 2065, 2439, 2494, 2882, 4021 |
| SchI | GAGTC | 8 cut(s) | 124, 694, 1322, 1657, 1905, 1985, 2800, 3227 |
| ScrFI | CCNGG | 9 cut(s) | 932, 987, 2130, 2178, 2327, 3276, 3578, 3678, 3851 |
| SduI | GDGCHC | 5 cut(s) | 556, 917, 992, 1063, 3942 |
| SexAI | ACCWGGT | 1 cut(s) | 930 |
| SfaNI | GCATC | 9 cut(s) | 211, 428, 583, 693, 764, 1135, 2172, 3078, 3782 |
| SfcI | CTRYAG | 4 cut(s) | 951, 1044, 1845, 3522 |
| Sfr274I | CTCGAG | 1 cut(s) | 3825 |
| SfuI | TTCGAA | 4 cut(s) | 787, 856, 1309, 3047 |
| SinI | GGWCC | 5 cut(s) | 367, 767, 2065, 2439, 4021 |
| SlaI | CTCGAG | 1 cut(s) | 3825 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 261, 1020 |
| SmlI | CTYRAG | 2 cut(s) | 423, 3825 |
| SmoI | CTYRAG | 2 cut(s) | 423, 3825 |
| SnaBI | TACGTA | 2 cut(s) | 647, 1240 |
| SspI | AATATT | 4 cut(s) | 329, 1180, 2813, 2966 |
| SspMI | CTAG | 7 cut(s) | 116, 212, 408, 1533, 2354, 3437, 3896 |
| StyD4I | CCNGG | 9 cut(s) | 930, 985, 2128, 2176, 2325, 3274, 3576, 3676, 3849 |
| StyI | CCWWGG | 2 cut(s) | 2673, 3491 |
| TaaI | ACNGT | 4 cut(s) | 667, 1846, 2300, 3286 |
| TatI | WGTACW | 4 cut(s) | 271, 427, 878, 1393 |
| TscAI | CASTG | 3 cut(s) | 157, 1352, 1459 |
| TseFI | GTSAC | 1 cut(s) | 1192 |
| TseI | GCWGC | 2 cut(s) | 3697, 3842 |
| Tsp45I | GTSAC | 1 cut(s) | 1192 |
| TspGWI | ACGGA | 5 cut(s) | 380, 564, 1719, 2011, 3048 |
| TspRI | CASTG | 3 cut(s) | 157, 1352, 1459 |
| Tth111I | GACNNNGTC | 1 cut(s) | 932 |
| VpaK11BI | GGWCC | 5 cut(s) | 367, 767, 2065, 2439, 4021 |
| VspI | ATTAAT | 1 cut(s) | 77 |
| XbaI | TCTAGA | 1 cut(s) | 2353 |
| XceI | RCATGY | 1 cut(s) | 1055 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 731 |
| XhoI | CTCGAG | 1 cut(s) | 3825 |
| XmnI | GAANNNNTTC | 4 cut(s) | 627, 1819, 2185, 2682 |
| XspI | CTAG | 7 cut(s) | 116, 212, 408, 1533, 2354, 3437, 3896 |
| Zsp2I | ATGCAT | 2 cut(s) | 421, 779 |