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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g32280 |
| rosa_laevigata | RLG00000001669 RLG00000001674 RLG00000031849 |
| rosa_multiflora | Rmu_co8422033.1_g000001 Rmu_sc0000356.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00232350 Rroxscaffold_3G00232370 |
| rosa_rugosa | Rorug04G0458100 |
| rosa_samantha | Rh5AG089800 Rh5BG085300 Rh5CG099200 Rh5DG085100 Rh6AG105400 Rh7AG389100 Rh7AG389300 Rh7BG374900 Rh7BG375200 Rh7CG408400 Rh7DG387100 |
| rosa_wichuraiana | Rw7G032630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 147, 356 |
| AclWI | GGATC | 3 cut(s) | 170, 213, 226 |
| AcsI | RAATTY | 1 cut(s) | 137 |
| AcuI | CTGAAG | 1 cut(s) | 186 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 42 |
| AgsI | TTSAA | 5 cut(s) | 94, 124, 142, 422, 459 |
| AjnI | CCWGG | 1 cut(s) | 323 |
| AleI | CACNNNNGTG | 1 cut(s) | 437 |
| Alw26I | GTCTC | 3 cut(s) | 160, 272, 343 |
| AlwI | GGATC | 3 cut(s) | 170, 213, 226 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 164 |
| Ama87I | CYCGRG | 1 cut(s) | 262 |
| ApoI | RAATTY | 1 cut(s) | 137 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 188, 220, 433, 465 |
| AsuII | TTCGAA | 1 cut(s) | 207 |
| AvaI | CYCGRG | 1 cut(s) | 262 |
| BaeGI | GKGCMC | 1 cut(s) | 408 |
| BamHI | GGATCC | 1 cut(s) | 218 |
| BbsI | GAAGAC | 1 cut(s) | 402 |
| BccI | CCATC | 2 cut(s) | 17, 122 |
| BceAI | ACGGC | 1 cut(s) | 59 |
| BciT130I | CCWGG | 1 cut(s) | 325 |
| BcoDI | GTCTC | 3 cut(s) | 160, 272, 343 |
| BfaI | CTAG | 1 cut(s) | 248 |
| BisI | GCNGC | 1 cut(s) | 148 |
| BlsI | GCNGC | 1 cut(s) | 149 |
| Bme1390I | CCNGG | 1 cut(s) | 325 |
| BmeT110I | CYCGRG | 1 cut(s) | 262 |
| BmiI | GGNNCC | 1 cut(s) | 220 |
| BmrFI | CCNGG | 1 cut(s) | 325 |
| BmsI | GCATC | 1 cut(s) | 361 |
| BpiI | GAAGAC | 1 cut(s) | 402 |
| Bpu14I | TTCGAA | 1 cut(s) | 207 |
| BpuEI | CTTGAG | 1 cut(s) | 254 |
| BsaBI | GATNNNNATC | 1 cut(s) | 174 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 42 |
| Bse8I | GATNNNNATC | 1 cut(s) | 174 |
| BseBI | CCWGG | 1 cut(s) | 325 |
| BseGI | GGATG | 1 cut(s) | 352 |
| BseJI | GATNNNNATC | 1 cut(s) | 174 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 42 |
| BseMII | CTCAG | 2 cut(s) | 171, 273 |
| BseRI | GAGGAG | 1 cut(s) | 301 |
| BseSI | GKGCMC | 1 cut(s) | 408 |
| BsiHKCI | CYCGRG | 1 cut(s) | 262 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 42 |
| BsmAI | GTCTC | 3 cut(s) | 160, 272, 343 |
| BsoBI | CYCGRG | 1 cut(s) | 262 |
| Bsp119I | TTCGAA | 1 cut(s) | 207 |
| Bsp1286I | GDGCHC | 1 cut(s) | 408 |
| Bsp143I | GATC | 3 cut(s) | 126, 175, 218 |
| BspACI | CCGC | 2 cut(s) | 147, 356 |
| BspCNI | CTCAG | 2 cut(s) | 170, 274 |
| BspLI | GGNNCC | 1 cut(s) | 220 |
| BspPI | GGATC | 3 cut(s) | 170, 213, 226 |
| BspT104I | TTCGAA | 1 cut(s) | 207 |
| BssMI | GATC | 3 cut(s) | 126, 175, 218 |
| Bst2UI | CCWGG | 1 cut(s) | 325 |
| Bst6I | CTCTTC | 3 cut(s) | 92, 204, 339 |
| BstBI | TTCGAA | 1 cut(s) | 207 |
| BstDEI | CTNAG | 2 cut(s) | 157, 282 |
| BstF5I | GGATG | 1 cut(s) | 352 |
| BstKTI | GATC | 3 cut(s) | 129, 178, 221 |
| BstMAI | GTCTC | 3 cut(s) | 160, 272, 343 |
| BstMBI | GATC | 3 cut(s) | 126, 175, 218 |
| BstNI | CCWGG | 1 cut(s) | 325 |
| BstSCI | CCNGG | 1 cut(s) | 323 |
| BstSLI | GKGCMC | 1 cut(s) | 408 |
| BstV2I | GAAGAC | 1 cut(s) | 402 |
| BstX2I | RGATCY | 1 cut(s) | 218 |
| BstYI | RGATCY | 1 cut(s) | 218 |
| BtsCI | GGATG | 1 cut(s) | 352 |
| BtsIMutI | CAGTG | 1 cut(s) | 60 |
| CaiI | CAGNNNCTG | 1 cut(s) | 164 |
| CseI | GACGC | 2 cut(s) | 47, 407 |
| CviJI | RGCY | 3 cut(s) | 150, 312, 449 |
| CviKI_1 | RGCY | 3 cut(s) | 150, 312, 449 |
| DdeI | CTNAG | 2 cut(s) | 157, 282 |
| DpnI | GATC | 3 cut(s) | 128, 177, 220 |
| DpnII | GATC | 3 cut(s) | 126, 175, 218 |
| Eam1104I | CTCTTC | 3 cut(s) | 92, 204, 339 |
| EarI | CTCTTC | 3 cut(s) | 92, 204, 339 |
| EciI | GGCGGA | 1 cut(s) | 345 |
| Eco57I | CTGAAG | 1 cut(s) | 186 |
| Eco88I | CYCGRG | 1 cut(s) | 262 |
| EcoRII | CCWGG | 1 cut(s) | 323 |
| FaiI | YATR | 3 cut(s) | 107, 224, 297 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 290, 322 |
| Fnu4HI | GCNGC | 1 cut(s) | 148 |
| FokI | GGATG | 1 cut(s) | 339 |
| Fsp4HI | GCNGC | 1 cut(s) | 148 |
| FspBI | CTAG | 1 cut(s) | 248 |
| GluI | GCNGC | 1 cut(s) | 148 |
| HgaI | GACGC | 2 cut(s) | 47, 407 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 4 cut(s) | 65, 120, 161, 265 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 7 cut(s) | 14, 37, 119, 160, 166, 283, 343 |
| Hpy188III | TCNNGA | 3 cut(s) | 124, 248, 262 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| Hpy99I | CGWCG | 1 cut(s) | 41 |
| HpyCH4IV | ACGT | 1 cut(s) | 438 |
| HpyCH4V | TGCA | 3 cut(s) | 230, 295, 352 |
| HpyF3I | CTNAG | 2 cut(s) | 157, 282 |
| HpySE526I | ACGT | 1 cut(s) | 438 |
| Kzo9I | GATC | 3 cut(s) | 126, 175, 218 |
| LpnPI | CCDG | 4 cut(s) | 86, 192, 310, 337 |
| LweI | GCATC | 1 cut(s) | 361 |
| MaeI | CTAG | 1 cut(s) | 248 |
| MaeII | ACGT | 1 cut(s) | 438 |
| MaeIII | GTNAC | 2 cut(s) | 241, 439 |
| MalI | GATC | 3 cut(s) | 128, 177, 220 |
| MboI | GATC | 3 cut(s) | 126, 175, 218 |
| MboII | GAAGA | 8 cut(s) | 79, 82, 179, 196, 221, 248, 356, 407 |
| MflI | RGATCY | 1 cut(s) | 218 |
| MhlI | GDGCHC | 1 cut(s) | 408 |
| MluCI | AATT | 2 cut(s) | 137, 472 |
| MlyI | GAGTC | 1 cut(s) | 274 |
| MmeI | TCCRAC | 1 cut(s) | 60 |
| MnlI | CCTC | 3 cut(s) | 83, 279, 373 |
| MslI | CAYNNNNRTG | 1 cut(s) | 437 |
| MspR9I | CCNGG | 1 cut(s) | 325 |
| MvaI | CCWGG | 1 cut(s) | 325 |
| NdeII | GATC | 3 cut(s) | 126, 175, 218 |
| NlaIV | GGNNCC | 1 cut(s) | 220 |
| NmuCI | GTSAC | 2 cut(s) | 241, 439 |
| NspV | TTCGAA | 1 cut(s) | 207 |
| OliI | CACNNNNGTG | 1 cut(s) | 437 |
| PaeR7I | CTCGAG | 1 cut(s) | 262 |
| PfeI | GAWTC | 3 cut(s) | 65, 120, 161 |
| PkrI | GCNGC | 1 cut(s) | 149 |
| PleI | GAGTC | 1 cut(s) | 273 |
| PpsI | GAGTC | 1 cut(s) | 273 |
| Psp6I | CCWGG | 1 cut(s) | 323 |
| PspGI | CCWGG | 1 cut(s) | 323 |
| PspN4I | GGNNCC | 1 cut(s) | 220 |
| PstNI | CAGNNNCTG | 1 cut(s) | 164 |
| PsuI | RGATCY | 1 cut(s) | 218 |
| RseI | CAYNNNNRTG | 1 cut(s) | 437 |
| SatI | GCNGC | 1 cut(s) | 148 |
| Sau3AI | GATC | 3 cut(s) | 126, 175, 218 |
| SchI | GAGTC | 1 cut(s) | 274 |
| ScrFI | CCNGG | 1 cut(s) | 325 |
| SduI | GDGCHC | 1 cut(s) | 408 |
| SetI | ASST | 6 cut(s) | 75, 329, 337, 384, 441, 464 |
| SfaNI | GCATC | 1 cut(s) | 361 |
| Sfr274I | CTCGAG | 1 cut(s) | 262 |
| SfuI | TTCGAA | 1 cut(s) | 207 |
| SlaI | CTCGAG | 1 cut(s) | 262 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 437 |
| SmlI | CTYRAG | 2 cut(s) | 262, 269 |
| SmoI | CTYRAG | 2 cut(s) | 262, 269 |
| Sse9I | AATT | 2 cut(s) | 137, 472 |
| SsiI | CCGC | 2 cut(s) | 147, 356 |
| SspI | AATATT | 1 cut(s) | 21 |
| SspMI | CTAG | 1 cut(s) | 248 |
| StyD4I | CCNGG | 1 cut(s) | 323 |
| TaiI | ACGT | 1 cut(s) | 441 |
| TaqI | TCGA | 2 cut(s) | 207, 263 |
| TasI | AATT | 2 cut(s) | 137, 472 |
| TauI | GCSGC | 1 cut(s) | 150 |
| TfiI | GAWTC | 3 cut(s) | 65, 120, 161 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TseFI | GTSAC | 2 cut(s) | 241, 439 |
| Tsp45I | GTSAC | 2 cut(s) | 241, 439 |
| TspDTI | ATGAA | 1 cut(s) | 408 |
| TspGWI | ACGGA | 1 cut(s) | 209 |
| TspRI | CASTG | 1 cut(s) | 67 |
| XapI | RAATTY | 1 cut(s) | 137 |
| XbaI | TCTAGA | 1 cut(s) | 247 |
| XhoI | CTCGAG | 1 cut(s) | 262 |
| XspI | CTAG | 1 cut(s) | 248 |