Rh5AG524300

Callose synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
89889659 .. 89910525
20867 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG524300.1

Sequence Viewer

Length: 4674 bp
ATGTCTGCACTAAATCTGTTTCAAAACTGGAAGATTGTTTTTGAAAAATATCAATTTGAGGGAGTTGCTGAGGGAATTGTAGCTCTACCGCAAAATGAAGGGAAATATTCGGATGTACGTCGGCAAGTCGCTTTTATTAGTCACAAGTCACAACCGGATAGCAAACCAGCTAGTGGAGATCGATGGGTGGGGAAAGTTAACTTCGTTGAGATACGGTCATTCTGGCATATCTTTAGAAGCTTTGACCGCATGTGGAGTTTCTTTATTCTATGTTTACAGGTTATGATAATTGTTGCTTGGAATGGCTCGGGCCAACCCACATCAATATTTTCTGCCGATGTATTCAAGAAAGCTTTGAGCGTCTTTATAACTGCTGCAATATTGAAGCTTGGGCAAGCTGTTCTAGATGTAATTCTTAGCTGGAAGTCTAGGCGGAGTATGTCATTCCATGTTAAGTTGAGATATATTGCTAAGGTCATTTCAGCTGCTGCATGGGTAATAATTCTACCGGTTACTTATGCGTATACTTGGGAAAACCCTCCTGGGTTTGCTCAGACCATTAAAGGTTGGTTTGGCAGTAATAAAAATGCGCCCTCCTTGTTCATCTTGGCTGTTGTTATCTACTTGTCACCGAATATGCTGGCTGGGGTGTTGTTTCTTTTCCCATTTATTCGCCGATTCCTTGAGAGATCAAACTATAGGATTGTGATGCTTATGATGTGGTGGTCACAGCCTCGTCTGTATGTTGGGAGGGGAATGCATGAGAGCACATTTTCTCTTTTCAAGTACACGATGTTTTGGGTTCTTCTTATAGTGACAAAGTTGGCATTCAGTTACTACATAGAGATAAAGCCTTTAGTGGGTCCAACAAAAGCCATCATGAATGTACGTATAACGAATTTCCAGTGGCATGAGTTCTTTCCCCGTGCAAAGAACAATATCGGTGTTGTGATTGCACTCTGGGCTCCAATTATCCTGGTCTATTTTATGGATACCCAGATTTGGTATGCAATATACTCGACAATATTCGGAGGTATTTATGGTGCATTCCGTCGCCTTGGAGAGATACGGACACTAGGAATGCTAAGATCTCGCTTTGAATCATTGCCTGGTGCTTTTAACGCCTGTTTAATTCCGGTGGATAAGAGTGAGCCAAAGAAGAAAGGACTGAAGGCTACATTGTCCCGCACCTTTGGTCATGTTGAAGGTAGCAAAGAGAAACAGGCTGCAAGGTTTGCGCAATTATGGAACAAAATAATAAGTAGTTTCAGAGAGGAGGATCTTATAAGCAATAGGGAAATGAACCTTTTGCTTGTTCCTTATTGGGCTGATCGTGATTTGGACCTCATACAGTGGCCTCCATTTTTACTTGCTAGCAAGATCCCAATAGCATTAGACATGGCCAAGGACAGCAATGGCAAGGATAAAGAGCTAACAAAAAGGATCATGGCTGATGAATACATGCATTGCGCTGTTCGTGAATGCTATGCTTCATTTAAGAACATAATTAAGTTTCTGGTTCAGGGGAGCCGTGAGAAAGAGGTTATAGATTACATATTTCTTGAGGTTGACAAGCACATAGGAGATGGTAACCTGATCCGTGAATTCAAGATGAGTGCTCTTCCTAGCCTCTATGACCACTTTGTTAGCCTTATCAATTTTTTGTTAAAGAACAGTCAGGACGACAGGGATCAAGTTGTGATTCTATTCCAGGACATGCTGGAGGTAGTGACAAGAGATATAATGATGGAGGACCAGGACCATATAACCAGCTTGGTAGATTCAGTCCACGGAGGGTCGGGCCATGAGGGGATGATGCCTCTTGATCAACATCAACAGCATCAGTTGTTTGCATCTGCTGGAGCTATCAACTTTCCTCTTACACATGTAACAGAGGCTTGGAAGGAGAAGATTAACCGTCTTTATCTATTACTTACCACAAAGGAGTCTGCCATGGACGTGCCATCCAACTTAGAAGCTAGAAGGCGAATTTCTTTCTTCTCGAATTCATTGTTTATGGATATGCCTCCAGCACCAAAAGTTCGCAATATGCTTTCTTTCTCTGTTTTAACTCCTTACTACACCGAGGAGGTTCTCTTTTCCATTGAAGGTCTGGAAAAACCGAATGAAGATGGTGTTTCTATTCTCTTCTACTTGCAAAAGATTTTCCCAGATGAATGGAACAACTTTCTTCAGCGTGTGAATTGCACCAACGAAGATGAATTGAACAACTTTCTTAAAGGGTCTGATGAATTGGAAGAAGAACTTCGCCTATGGGCATCATATAGAGGCCAAACTTTGACTCGTACTGTAAGAGGGATGATGTACTACCGGAAAGCTTTGGAGCTTCAGGCTTTTCTGGATATGGCCAAAGATGACGATTTAATGGAAGGCTATAAGGCCATAGAGTTGAATTCAGAAGATCAATCAAAGGGGGGAAGGTCACTATGGGCGCAATGTCAAGCAGTAGCTGATATGAAATTCACATATGTGGTTTCATGCCAACTGTATGGGATTCAAAAGCGATCTGGTGATCATCATGCACAGGACATTCTGAGGCTCATGACAACATACCCGTCATTACGAGTGGCATATATTGATGAGGTTGAAGAACCTAGCAAAGATAGGGCTCAGAAGATAAACCAAAAGGCTTATTATTCTACTTTAGTAAAGGCTGCTATGCCAAAGTCAATTGATTCTTCAGAGCCAGTACAAAATCTTGACCAGGTTATTTATCGCATAAAGCTTCCGGGACCTGCTATCTTGGGAGAGGGAAAGCCAGAAAATCAAAACCATGCCATTATTTTCACACGTGGAGAAGGCTTACAAACAATTGACATGAACCAGGATAACTACATGGAAGAAGCTTTGAAAATGAGGAATTTGCTACAAGAATTTCTCAAACATGATGGCGTTAGGCACCCTACAATTCTTGGACTTAGGGAGCATATATTTACGGGAAGTGTTTCTTCTCTAGCTTGGTTCATGTCAAATCAGGAGAACAGTTTTGTGACTATTGGTCAAAGACTATTGGCCAACCCTCTCAGGGTTCGATTTCATTATGGCCATCCCGATGTGTTTGATAGGCTCTTTCACCTTAGTAGAGGGGGTGTCAGTAAGGCATCCAAGGTTATCAATTTGAGTGAAGACATTTTTGCGGGCTTTAATTCCACTCTCCGTGAAGGCAATGTAACTCATCACGAATACATACAAGTGGGGAAGGGGAGAGATGTCGGTCTTAACCAAATCTCCATGTTTGAGGCAAAAATTGCTAATGGCAACGGGGAGCAGACACTCAGTCGTGACATATACCGACTTGGACATCGTTTTGACTTTTTCCGTATGCTGTCATGCTATTTCACCACAATTGGTTTCTACTACAGTACTCTGATCACTGTCCTTACAGTGTATGTCTTCCTTTATGGTCGCCTCTACCTGGTTCTTAGTGGACTTGAAGAAGGTTTGAGCACTCAAGCAGCAATTCGAGATAATAAGCCTCTTCAAGTTGCTCTTGCTTCTCAATCATTTGTTCAAATAGGGTTTTTGATGGCTTTGCCTATGTTGATGGAAATTGGCTTGGAAAAGGGTTTCCGAACTGCATTAAGTGAATTCGTGTTGATGCAATTGCAATTGGCCCCAGTATTTTTCACATTCTCACTTGGGACAAAGACCCACTATTATGGACGGACATTACTGCATGGTGGTGCCAAATATAGATCGACAGGTCGTGGGTTTGTGGTGTTCCATGCCAAGTTTGCCGACAACTATAGGCTCTACTCTCGCAGCCACTTTGTTAAGGGTATTGAGCTCTTGATTTTACTTGTGGTGTACCAGATCTTTGGTCATACTTATAGAAGTGCTGTTGCCTACATTTTAATCACTGTATCTATGTGGTTTATGGTGGTTACCTGGCTTTTTGCTCCCTTTCTGTTCAATCCCTCTGGTTTTGAGTGGCAAAAGATAGTTGATGATTGGACTGATTGGAATAAGTGGATAAGCAACCGTGGAGGTATAGGTGTTCCACCTGAAAAAAGTTGGGAATCATGGTGGGAGGAGGAACAAGAACATCTTCGATATTCTGGAAAACGTGGTATTGTAGCTGAGATACTGCTATCCGTACGTTTCTTTATCTATCAGTATGGGCTCGTATATCACTTGAACATTGCAAAGAAAACCAAGAGTGTCCTGGTCTATGGTATCTCATGGCTGGTGATCGTCCTTATTTTGTTTGTCATGAAGACTGTATCTGTTGGTAGGAGAAAGTTCAGTGCTGAGTACCAACTTGTATTCCGGCTGATCAAGGGATTAATATTCATTACTTTTGTGTCCATTTTGGTCACTTTGATTGTGCTGCCTCACATGACCCTGCAGGACATCATTGTTTGCATTCTTGCTTTCATGCCAACTGGTTGGGGGATGCTTATGATTGCCCAAGCTTGCAAGCCTATTGTTCAAAAAGCTGGTTTATGGCCATCAGTTCGGACTCTTGCTCGTGGCTTTGAGATTGTTATGGGCTTGCTTCTGTTCACCCCAGTTGCATTCTTGGCCTGGTTTCCTTTTGTTTCGGAATTTCAAACTCGTATGCTCTTCAACCAAGCATTCAGTAGAGGTTTACAGATTTCTCGTATTCTTGGCGGGCAACGCAAGGATCGTTCATCCCGGAATAAGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1557

Amino Acids

179.16

Weight (kDa)

9.2

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CALS1 PF25968 453 - 647 2.7e-65 Callose synthase 1 domain
Glucan_synthase PF02364 654 - 1451 1.9e-239 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 368, 1286
Acc16I TGCGCA 1 cut(s) 1239
Acc36I ACCTGC 1 cut(s) 2764
AccB1I GGYRCC 2 cut(s) 2919, 3704
AccB7I CCANNNNNTGG 1 cut(s) 173
AccI GTMKAC 1 cut(s) 524
AciI CCGC 6 cut(s) 89, 247, 433, 1186, 3158, 4635
AclWI GGATC 6 cut(s) 1287, 1375, 1451, 1591, 1698, 4656
AcoI YGGCCR 5 cut(s) 1401, 2367, 3033, 3064, 4469
AcuI CTGAAG 4 cut(s) 1190, 2177, 2333, 2685
AcvI CACGTG 1 cut(s) 2813
AfiI CCNNNNNNNGG 6 cut(s) 173, 860, 1002, 3046, 3436, 4666
AflIII ACRYGT 2 cut(s) 1885, 2810
AgeI ACCGGT 1 cut(s) 508
AhdI GACNNNNNGTC 2 cut(s) 3018, 3297
AjiI CACGTC 1 cut(s) 1960
AleI CACNNNNGTG 1 cut(s) 2489
Alw21I GWGCWC 4 cut(s) 770, 1621, 3470, 3810
AlwI GGATC 6 cut(s) 1287, 1375, 1451, 1591, 1698, 4656
AlwNI CAGNNNCTG 2 cut(s) 488, 2471
Ama87I CYCGRG 1 cut(s) 307
ApeKI GCWGC 8 cut(s) 374, 485, 488, 1226, 2675, 3476, 3783, 4351
AseI ATTAAT 1 cut(s) 4307
AsiGI ACCGGT 1 cut(s) 508
Asp700I GAANNNNTTC 3 cut(s) 2265, 2965, 4068
AspLEI GCGC 4 cut(s) 592, 1240, 1472, 2455
AspS9I GGNCC 8 cut(s) 310, 863, 1342, 1753, 1759, 1801, 2753, 3634
AsuC2I CCSGG 2 cut(s) 2751, 4660
AsuHPI GGTGA 6 cut(s) 621, 2543, 3086, 3352, 4222, 4519
AsuNHI GCTAGC 1 cut(s) 1373
AvaI CYCGRG 1 cut(s) 307
AvaII GGWCC 5 cut(s) 863, 1342, 1753, 1759, 2753
BalI TGGCCA 5 cut(s) 1403, 2369, 3035, 3066, 4471
BanI GGYRCC 2 cut(s) 2919, 3704
BanII GRGCYC 4 cut(s) 967, 2632, 3810, 4146
BauI CACGAG 1 cut(s) 4491
BbrPI CACGTG 1 cut(s) 2813
BbsI GAAGAC 3 cut(s) 3153, 3406, 4244
Bbv12I GWGCWC 4 cut(s) 770, 1621, 3470, 3810
BbvCI CCTCAGC 1 cut(s) 69
BbvI GCAGC 8 cut(s) 361, 472, 475, 1213, 2662, 3488, 3795, 4338
BceAI ACGGC 1 cut(s) 1515
BcgI CGANNNNNNTGC 2 cut(s) 999, 1033
BciVI GTATCC 1 cut(s) 985
BclI TGATCA 4 cut(s) 1825, 2533, 3390, 4296
BcnI CCSGG 2 cut(s) 2751, 4660
BfaI CTAG 9 cut(s) 171, 404, 429, 1076, 1374, 1626, 1980, 2616, 2975
BfmI CTRYAG 4 cut(s) 697, 3379, 3766, 4367
BfuAI ACCTGC 1 cut(s) 2764
BfuI GTATCC 1 cut(s) 985
BglII AGATCT 2 cut(s) 1088, 3834
BisI GCNGC 8 cut(s) 375, 486, 489, 1227, 2676, 3477, 3784, 4352
BlsI GCNGC 8 cut(s) 376, 487, 490, 1228, 2677, 3478, 3785, 4353
BmcAI AGTACT 1 cut(s) 3385
Bme18I GGWCC 5 cut(s) 863, 1342, 1753, 1759, 2753
BmeRI GACNNNNNGTC 2 cut(s) 3018, 3297
BmeT110I CYCGRG 1 cut(s) 307
BmgBI CACGTC 1 cut(s) 1960
BmgT120I GGNCC 8 cut(s) 310, 863, 1342, 1753, 1759, 1801, 2753, 3634
BmiI GGNNCC 7 cut(s) 864, 966, 1529, 2754, 2921, 3636, 3706
BmrI ACTGGG 2 cut(s) 3632, 4526
BmsI GCATC 8 cut(s) 699, 1806, 1849, 1862, 2288, 3131, 3609, 4407
BmtI GCTAGC 1 cut(s) 1377
BmuI ACTGGG 2 cut(s) 3632, 4526
BpiI GAAGAC 3 cut(s) 3153, 3406, 4244
BpmI CTGGAG 3 cut(s) 1742, 1881, 2013
Bpu10I CCTNAGC 2 cut(s) 69, 471
BpuEI CTTGAG 3 cut(s) 704, 1583, 3456
BpuMI CCSGG 2 cut(s) 2751, 4660
Bsa29I ATCGAT 1 cut(s) 181
BsaAI YACGTR 2 cut(s) 890, 2813
BsaBI GATNNNNATC 1 cut(s) 1830
BsaJI CCNNGG 8 cut(s) 542, 1057, 1404, 1789, 1953, 2085, 3126, 4003
BsaWI WCCGGW 4 cut(s) 154, 508, 1135, 2331
BsaXI ACNNNNNCTCC 2 cut(s) 3233, 3263
Bsc4I CCNNNNNNNGG 6 cut(s) 173, 860, 1002, 3046, 3436, 4666
Bse118I RCCGGY 1 cut(s) 508
Bse1I ACTGG 6 cut(s) 32, 904, 2708, 3638, 4411, 4532
Bse3DI GCAATG 6 cut(s) 1103, 1420, 1465, 2462, 3193, 4161
Bse8I GATNNNNATC 1 cut(s) 1830
BseCI ATCGAT 1 cut(s) 181
BseDI CCNNGG 8 cut(s) 542, 1057, 1404, 1789, 1953, 2085, 3126, 4003
BseGI GGATG 8 cut(s) 118, 1818, 1964, 2325, 3067, 3122, 4422, 4655
BseJI GATNNNNATC 1 cut(s) 1830
BseLI CCNNNNNNNGG 6 cut(s) 173, 860, 1002, 3046, 3436, 4666
BseMI GCAATG 6 cut(s) 1103, 1420, 1465, 2462, 3193, 4161
BseMII CTCAG 8 cut(s) 60, 566, 2546, 2645, 3058, 3310, 4092, 4263
BseNI ACTGG 6 cut(s) 32, 904, 2708, 3638, 4411, 4532
BseRI GAGGAG 3 cut(s) 1289, 2102, 4067
BseXI GCAGC 8 cut(s) 361, 472, 475, 1213, 2662, 3488, 3795, 4338
BseYI CCCAGC 1 cut(s) 644
BshNI GGYRCC 2 cut(s) 2919, 3704
BshTI ACCGGT 1 cut(s) 508
BshVI ATCGAT 1 cut(s) 181
BsiHKAI GWGCWC 4 cut(s) 770, 1621, 3470, 3810
BsiHKCI CYCGRG 1 cut(s) 307
BsiSI CCGG 7 cut(s) 155, 509, 1136, 2332, 2750, 4291, 4660
BsiWI CGTACG 1 cut(s) 4117
BslFI GGGAC 3 cut(s) 1168, 2766, 3676
BslI CCNNNNNNNGG 6 cut(s) 173, 860, 1002, 3046, 3436, 4666
BsmFI GGGAC 3 cut(s) 1168, 2766, 3676
BsmI GAATGC 8 cut(s) 762, 827, 1046, 1086, 1487, 4386, 4538, 4598
BsoBI CYCGRG 1 cut(s) 307
Bsp1286I GDGCHC 7 cut(s) 770, 967, 1621, 2632, 3470, 3810, 4146
Bsp19I CCATGG 1 cut(s) 1953
BspACI CCGC 6 cut(s) 89, 247, 433, 1186, 3158, 4635
BspCNI CTCAG 8 cut(s) 61, 565, 2547, 2644, 3057, 3309, 4093, 4264
BspDI ATCGAT 1 cut(s) 181
BspHI TCATGA 3 cut(s) 879, 2562, 4233
BspLI GGNNCC 7 cut(s) 864, 966, 1529, 2754, 2921, 3636, 3706
BspMAI CTGCAG 1 cut(s) 4371
BspMI ACCTGC 1 cut(s) 2764
BspOI GCTAGC 1 cut(s) 1377
BspPI GGATC 6 cut(s) 1287, 1375, 1451, 1591, 1698, 4656
BspQI GCTCTTC 2 cut(s) 1626, 4592
BspT107I GGYRCC 2 cut(s) 2919, 3704
BsrDI GCAATG 6 cut(s) 1103, 1420, 1465, 2462, 3193, 4161
BsrFI RCCGGY 1 cut(s) 508
BsrI ACTGG 6 cut(s) 32, 904, 2708, 3638, 4411, 4532
BssAI RCCGGY 1 cut(s) 508
BssECI CCNNGG 8 cut(s) 542, 1057, 1404, 1789, 1953, 2085, 3126, 4003
BssNAI GTATAC 1 cut(s) 525
BssSI CACGAG 1 cut(s) 4491
BssT1I CCWWGG 4 cut(s) 1057, 1404, 1953, 3126
Bst1107I GTATAC 1 cut(s) 525
Bst2BI CACGAG 1 cut(s) 4491
Bst6I CTCTTC 4 cut(s) 1626, 2153, 3504, 4592
BstAPI GCANNNNNTGC 2 cut(s) 1235, 3269
BstBAI YACGTR 2 cut(s) 890, 2813
BstC8I GCNNGC 8 cut(s) 396, 642, 1375, 3160, 4438, 4442, 4517, 4637
BstDSI CCRYGG 3 cut(s) 1789, 1953, 4003
BstEII GGTNACC 2 cut(s) 1589, 3904
BstF5I GGATG 8 cut(s) 118, 1818, 1964, 2325, 3067, 3122, 4422, 4655
BstHHI GCGC 4 cut(s) 592, 1240, 1472, 2455
BstMWI GCNNNNNNNGC 8 cut(s) 246, 962, 1121, 1235, 3269, 3755, 4544, 4641
BstNSI RCATGY 4 cut(s) 253, 1465, 1720, 1889
BstPI GGTNACC 2 cut(s) 1589, 3904
BstSFI CTRYAG 4 cut(s) 697, 3379, 3766, 4367
BstSNI TACGTA 1 cut(s) 890
BstV1I GCAGC 8 cut(s) 361, 472, 475, 1213, 2662, 3488, 3795, 4338
BstV2I GAAGAC 3 cut(s) 3153, 3406, 4244
BstX2I RGATCY 4 cut(s) 1088, 1279, 1380, 3834
BstXI CCANNNNNNTGG 5 cut(s) 2178, 2510, 3680, 3839, 4410
BstYI RGATCY 4 cut(s) 1088, 1279, 1380, 3834
BstZ17I GTATAC 1 cut(s) 525
Bsu15I ATCGAT 1 cut(s) 181
BsuI GTATCC 1 cut(s) 985
BsuTUI ATCGAT 1 cut(s) 181
BtgI CCRYGG 3 cut(s) 1789, 1953, 4003
BtrI CACGTC 1 cut(s) 1960
BtsCI GGATG 8 cut(s) 118, 1818, 1964, 2325, 3067, 3122, 4422, 4655
BtsIMutI CAGTG 6 cut(s) 911, 1358, 3393, 3411, 3879, 4273
BveI ACCTGC 1 cut(s) 2764
Cac8I GCNNGC 8 cut(s) 396, 642, 1375, 3160, 4438, 4442, 4517, 4637
CaiI CAGNNNCTG 2 cut(s) 488, 2471
CciI TCATGA 3 cut(s) 879, 2562, 4233
CfoI GCGC 4 cut(s) 592, 1240, 1472, 2455
Cfr10I RCCGGY 1 cut(s) 508
Cfr13I GGNCC 8 cut(s) 310, 863, 1342, 1753, 1759, 1801, 2753, 3634
ClaI ATCGAT 1 cut(s) 181
CseI GACGC 1 cut(s) 349
CsiI ACCWGGT 2 cut(s) 2724, 3435
CspAI ACCGGT 1 cut(s) 508
DriI GACNNNNNGTC 2 cut(s) 3018, 3297
EaeI YGGCCR 5 cut(s) 1401, 2367, 3033, 3064, 4469
Eam1104I CTCTTC 4 cut(s) 1626, 2153, 3504, 4592
Eam1105I GACNNNNNGTC 2 cut(s) 3018, 3297
EarI CTCTTC 4 cut(s) 1626, 2153, 3504, 4592
EciI GGCGGA 1 cut(s) 448
Ecl136II GAGCTC 1 cut(s) 3808
Eco105I TACGTA 1 cut(s) 890
Eco130I CCWWGG 4 cut(s) 1057, 1404, 1953, 3126
Eco24I GRGCYC 4 cut(s) 967, 2632, 3810, 4146
Eco47I GGWCC 5 cut(s) 863, 1342, 1753, 1759, 2753
Eco53kI GAGCTC 1 cut(s) 3808
Eco57I CTGAAG 4 cut(s) 1190, 2177, 2333, 2685
Eco72I CACGTG 1 cut(s) 2813
Eco88I CYCGRG 1 cut(s) 307
Eco91I GGTNACC 2 cut(s) 1589, 3904
EcoICRI GAGCTC 1 cut(s) 3808
EcoO109I RGGNCCY 1 cut(s) 2753
EcoO65I GGTNACC 2 cut(s) 1589, 3904
EcoRI GAATTC 4 cut(s) 1604, 2005, 2413, 3608
EcoT14I CCWWGG 4 cut(s) 1057, 1404, 1953, 3126
EcoT22I ATGCAT 2 cut(s) 762, 1467
EcoT38I GRGCYC 4 cut(s) 967, 2632, 3810, 4146
ErhI CCWWGG 4 cut(s) 1057, 1404, 1953, 3126
FalI AAGNNNNNCTT 8 cut(s) 2250, 2282, 2953, 2985, 3495, 3527, 4053, 4085
FaqI GGGAC 3 cut(s) 1168, 2766, 3676
FauI CCCGC 3 cut(s) 1193, 3151, 4628
FauNDI CATATG 1 cut(s) 2488
FbaI TGATCA 4 cut(s) 1825, 2533, 3390, 4296
FblI GTMKAC 1 cut(s) 524
Fnu4HI GCNGC 8 cut(s) 375, 486, 489, 1227, 2676, 3477, 3784, 4352
FokI GGATG 8 cut(s) 125, 1825, 1951, 2332, 3054, 3109, 4429, 4642
FriOI GRGCYC 4 cut(s) 967, 2632, 3810, 4146
Fsp4HI GCNGC 8 cut(s) 375, 486, 489, 1227, 2676, 3477, 3784, 4352
FspBI CTAG 9 cut(s) 171, 404, 429, 1076, 1374, 1626, 1980, 2616, 2975
FspI TGCGCA 1 cut(s) 1239
GlaI GCGC 4 cut(s) 591, 1239, 1471, 2454
GluI GCNGC 8 cut(s) 375, 486, 489, 1227, 2676, 3477, 3784, 4352
GsaI CCCAGC 1 cut(s) 648
GsuI CTGGAG 3 cut(s) 1742, 1881, 2013
HapII CCGG 7 cut(s) 155, 509, 1136, 2332, 2750, 4291, 4660
HgaI GACGC 1 cut(s) 349
HhaI GCGC 4 cut(s) 592, 1240, 1472, 2455
Hin6I GCGC 4 cut(s) 590, 1238, 1470, 2453
HinP1I GCGC 4 cut(s) 590, 1238, 1470, 2453
HincII GTYRAC 2 cut(s) 199, 1570
HindII GTYRAC 2 cut(s) 199, 1570
HindIII AAGCTT 7 cut(s) 238, 351, 386, 2337, 2744, 2865, 4434
HpaI GTTAAC 1 cut(s) 199
HpaII CCGG 7 cut(s) 155, 509, 1136, 2332, 2750, 4291, 4660
HphI GGTGA 6 cut(s) 621, 2543, 3086, 3352, 4222, 4519
Hpy99I CGWCG 2 cut(s) 123, 1056
HpyCH4IV ACGT 6 cut(s) 118, 889, 1959, 2812, 4087, 4120
HpyF10VI GCNNNNNNNGC 8 cut(s) 246, 962, 1121, 1235, 3269, 3755, 4544, 4641
HpySE526I ACGT 6 cut(s) 118, 889, 1959, 2812, 4087, 4120
HspAI GCGC 4 cut(s) 590, 1238, 1470, 2453
Ksp22I TGATCA 4 cut(s) 1825, 2533, 3390, 4296
KspAI GTTAAC 1 cut(s) 199
LguI GCTCTTC 2 cut(s) 1626, 4592
LmnI GCTCC 7 cut(s) 970, 1527, 1862, 2344, 2944, 3286, 3925
Lsp1109I GCAGC 8 cut(s) 361, 472, 475, 1213, 2662, 3488, 3795, 4338
LweI GCATC 8 cut(s) 699, 1806, 1849, 1862, 2288, 3131, 3609, 4407
MabI ACCWGGT 2 cut(s) 2724, 3435
MaeI CTAG 9 cut(s) 171, 404, 429, 1076, 1374, 1626, 1980, 2616, 2975
MaeII ACGT 6 cut(s) 118, 889, 1959, 2812, 4087, 4120
MfeI CAATTG 5 cut(s) 2691, 2832, 3366, 3623, 3629
MflI RGATCY 4 cut(s) 1088, 1279, 1380, 3834
MhlI GDGCHC 7 cut(s) 770, 967, 1621, 2632, 3470, 3810, 4146
MlsI TGGCCA 5 cut(s) 1403, 2369, 3035, 3066, 4471
MluNI TGGCCA 5 cut(s) 1403, 2369, 3035, 3066, 4471
MlyI GAGTC 3 cut(s) 1955, 2296, 4477
MmeI TCCRAC 2 cut(s) 890, 1992
Mox20I TGGCCA 5 cut(s) 1403, 2369, 3035, 3066, 4471
Mph1103I ATGCAT 2 cut(s) 762, 1467
MroXI GAANNNNTTC 3 cut(s) 2265, 2965, 4068
MscI TGGCCA 5 cut(s) 1403, 2369, 3035, 3066, 4471
MslI CAYNNNNRTG 6 cut(s) 1958, 2489, 3072, 3212, 3678, 3702
Msp20I TGGCCA 5 cut(s) 1403, 2369, 3035, 3066, 4471
MspA1I CMGCKG 1 cut(s) 485
MspI CCGG 7 cut(s) 155, 509, 1136, 2332, 2750, 4291, 4660
MunI CAATTG 5 cut(s) 2691, 2832, 3366, 3623, 3629
Mva1269I GAATGC 8 cut(s) 762, 827, 1046, 1086, 1487, 4386, 4538, 4598
MwoI GCNNNNNNNGC 8 cut(s) 246, 962, 1121, 1235, 3269, 3755, 4544, 4641
NciI CCSGG 2 cut(s) 2751, 4660
NcoI CCATGG 1 cut(s) 1953
NdeI CATATG 1 cut(s) 2488
NheI GCTAGC 1 cut(s) 1373
NlaIV GGNNCC 7 cut(s) 864, 966, 1529, 2754, 2921, 3636, 3706
NsbI TGCGCA 1 cut(s) 1239
NsiI ATGCAT 2 cut(s) 762, 1467
NspI RCATGY 4 cut(s) 253, 1465, 1720, 1889
OliI CACNNNNGTG 1 cut(s) 2489
PagI TCATGA 3 cut(s) 879, 2562, 4233
PciI ACATGT 1 cut(s) 1885
PciSI GCTCTTC 2 cut(s) 1626, 4592
PcsI WCGNNNNNNNCGW 1 cut(s) 4648
PctI GAATGC 8 cut(s) 762, 827, 1046, 1086, 1487, 4386, 4538, 4598
PdmI GAANNNNTTC 3 cut(s) 2265, 2965, 4068
PfeI GAWTC 7 cut(s) 678, 1100, 1702, 1781, 2515, 2696, 4040
Pfl23II CGTACG 1 cut(s) 4117
PflMI CCANNNNNTGG 1 cut(s) 173
PfoI TCCNGGA 3 cut(s) 1710, 2749, 4658
PinAI ACCGGT 1 cut(s) 508
PkrI GCNGC 8 cut(s) 376, 487, 490, 1228, 2677, 3478, 3785, 4353
PleI GAGTC 3 cut(s) 1954, 2296, 4477
PmaCI CACGTG 1 cut(s) 2813
PmlI CACGTG 1 cut(s) 2813
PpsI GAGTC 3 cut(s) 1954, 2296, 4477
Ppu21I YACGTR 2 cut(s) 890, 2813
PpuMI RGGWCCY 1 cut(s) 2753
PscI ACATGT 1 cut(s) 1885
PshBI ATTAAT 1 cut(s) 4307
PsiI TTATAA 2 cut(s) 368, 1286
Psp124BI GAGCTC 1 cut(s) 3810
Psp5II RGGWCCY 1 cut(s) 2753
PspCI CACGTG 1 cut(s) 2813
PspEI GGTNACC 2 cut(s) 1589, 3904
PspFI CCCAGC 1 cut(s) 644
PspLI CGTACG 1 cut(s) 4117
PspN4I GGNNCC 7 cut(s) 864, 966, 1529, 2754, 2921, 3636, 3706
PspPI GGNCC 8 cut(s) 310, 863, 1342, 1753, 1759, 1801, 2753, 3634
PspPPI RGGWCCY 1 cut(s) 2753
PstI CTGCAG 1 cut(s) 4371
PstNI CAGNNNCTG 2 cut(s) 488, 2471
PsuI RGATCY 4 cut(s) 1088, 1279, 1380, 3834
PvuII CAGCTG 1 cut(s) 485
RseI CAYNNNNRTG 6 cut(s) 1958, 2489, 3072, 3212, 3678, 3702
SacI GAGCTC 1 cut(s) 3810
SapI GCTCTTC 2 cut(s) 1626, 4592
SatI GCNGC 8 cut(s) 375, 486, 489, 1227, 2676, 3477, 3784, 4352
Sau96I GGNCC 8 cut(s) 310, 863, 1342, 1753, 1759, 1801, 2753, 3634
SbfI CCTGCAGG 1 cut(s) 4371
ScaI AGTACT 1 cut(s) 3385
SchI GAGTC 3 cut(s) 1955, 2296, 4477
SdaI CCTGCAGG 1 cut(s) 4371
SduI GDGCHC 7 cut(s) 770, 967, 1621, 2632, 3470, 3810, 4146
SexAI ACCWGGT 2 cut(s) 2724, 3435
SfaNI GCATC 8 cut(s) 699, 1806, 1849, 1862, 2288, 3131, 3609, 4407
SfcI CTRYAG 4 cut(s) 697, 3379, 3766, 4367
SinI GGWCC 5 cut(s) 863, 1342, 1753, 1759, 2753
SmiMI CAYNNNNRTG 6 cut(s) 1958, 2489, 3072, 3212, 3678, 3702
SmlI CTYRAG 3 cut(s) 683, 1562, 3471
SmoI CTYRAG 3 cut(s) 683, 1562, 3471
SnaBI TACGTA 1 cut(s) 890
Sse8387I CCTGCAGG 1 cut(s) 4371
SsiI CCGC 6 cut(s) 89, 247, 433, 1186, 3158, 4635
SspI AATATT 5 cut(s) 107, 327, 381, 1026, 4311
SspMI CTAG 9 cut(s) 171, 404, 429, 1076, 1374, 1626, 1980, 2616, 2975
SstI GAGCTC 1 cut(s) 3810
StyI CCWWGG 4 cut(s) 1057, 1404, 1953, 3126
TaiI ACGT 6 cut(s) 121, 892, 1962, 2815, 4090, 4123
TaqI TCGA 7 cut(s) 181, 1019, 2003, 3052, 3484, 3719, 4072
TaqII GACCGA 1 cut(s) 3224
TatI WGTACW 4 cut(s) 786, 2325, 2710, 3383
TfiI GAWTC 7 cut(s) 678, 1100, 1702, 1781, 2515, 2696, 4040
TscAI CASTG 6 cut(s) 911, 1358, 3400, 3411, 3886, 4273
TseI GCWGC 8 cut(s) 374, 485, 488, 1226, 2675, 3476, 3783, 4351
TspGWI ACGGA 8 cut(s) 1040, 1084, 1589, 1806, 3167, 3329, 3700, 4105
TspRI CASTG 6 cut(s) 911, 1358, 3400, 3411, 3886, 4273
Van91I CCANNNNNTGG 1 cut(s) 173
VpaK11BI GGWCC 5 cut(s) 863, 1342, 1753, 1759, 2753
VspI ATTAAT 1 cut(s) 4307
XbaI TCTAGA 1 cut(s) 403
XceI RCATGY 4 cut(s) 253, 1465, 1720, 1889
XcmI CCANNNNNNNNNTGG 2 cut(s) 2110, 4183
XmiI GTMKAC 1 cut(s) 524
XmnI GAANNNNTTC 3 cut(s) 2265, 2965, 4068
XspI CTAG 9 cut(s) 171, 404, 429, 1076, 1374, 1626, 1980, 2616, 2975
ZrmI AGTACT 1 cut(s) 3385
Zsp2I ATGCAT 2 cut(s) 762, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.