Heavy-metal-associated domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28660 |
| fragaria_vesca | FvH4_3g34750 FvH4_3g34750 |
| malus_domestica | MD03G1102100.v1.1 MD11G1115900.v1.1 |
| prunus_persica | Prupe.6G007500_v2.0.a1 |
| pyrus_communis | pycom03g08330 pycom11g09760 |
| rosa_chinensis | RchiOBHm_Chr5g0062481 |
| rosa_laevigata | RLG00000035560 RLG00000035561 |
| rosa_multiflora | Rmu_sc0004988.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00018120 |
| rosa_rugosa | Rorug05G0350000 Rorug05G0350100 |
| rosa_samantha | Rh5AG410100 Rh5BG424000 Rh5BG424100 Rh5CG447700 Rh5CG447800 Rh5DG438500 |
| rosa_wichuraiana | Rw5G038620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 77 |
| AclWI | GGATC | 1 cut(s) | 67 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 201 |
| AgsI | TTSAA | 1 cut(s) | 104 |
| AluBI | AGCT | 1 cut(s) | 286 |
| AluI | AGCT | 1 cut(s) | 286 |
| AlwI | GGATC | 1 cut(s) | 67 |
| AoxI | GGCC | 1 cut(s) | 83 |
| AseI | ATTAAT | 1 cut(s) | 120 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 2 cut(s) | 206, 269 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BbsI | GAAGAC | 1 cut(s) | 328 |
| BccI | CCATC | 2 cut(s) | 146, 288 |
| BclI | TGATCA | 1 cut(s) | 274 |
| BfaI | CTAG | 1 cut(s) | 255 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BpiI | GAAGAC | 1 cut(s) | 328 |
| BsaBI | GATNNNNATC | 1 cut(s) | 279 |
| BsaJI | CCNNGG | 1 cut(s) | 80 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 201 |
| Bse8I | GATNNNNATC | 1 cut(s) | 279 |
| BseDI | CCNNGG | 1 cut(s) | 80 |
| BseGI | GGATG | 1 cut(s) | 183 |
| BseJI | GATNNNNATC | 1 cut(s) | 279 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 2 cut(s) | 117, 120 |
| BshFI | GGCC | 1 cut(s) | 85 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BsnI | GGCC | 1 cut(s) | 85 |
| Bsp143I | GATC | 3 cut(s) | 59, 199, 274 |
| BspACI | CCGC | 1 cut(s) | 77 |
| BspANI | GGCC | 1 cut(s) | 85 |
| BspPI | GGATC | 1 cut(s) | 67 |
| BssECI | CCNNGG | 1 cut(s) | 80 |
| BssMI | GATC | 3 cut(s) | 59, 199, 274 |
| BstDEI | CTNAG | 1 cut(s) | 287 |
| BstEII | GGTNACC | 1 cut(s) | 204 |
| BstF5I | GGATG | 1 cut(s) | 183 |
| BstKTI | GATC | 3 cut(s) | 62, 202, 277 |
| BstMBI | GATC | 3 cut(s) | 59, 199, 274 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 48 |
| BstPI | GGTNACC | 1 cut(s) | 204 |
| BstV2I | GAAGAC | 1 cut(s) | 328 |
| BsuRI | GGCC | 1 cut(s) | 85 |
| BtsCI | GGATG | 1 cut(s) | 183 |
| BtsI | GCAGTG | 1 cut(s) | 307 |
| BtsIMutI | CAGTG | 1 cut(s) | 307 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CviAII | CATG | 1 cut(s) | 314 |
| CviJI | RGCY | 3 cut(s) | 51, 85, 286 |
| CviKI_1 | RGCY | 3 cut(s) | 51, 85, 286 |
| DdeI | CTNAG | 1 cut(s) | 287 |
| DpnI | GATC | 3 cut(s) | 61, 201, 276 |
| DpnII | GATC | 3 cut(s) | 59, 199, 274 |
| EciI | GGCGGA | 1 cut(s) | 66 |
| Eco32I | GATATC | 1 cut(s) | 352 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| Eco91I | GGTNACC | 1 cut(s) | 204 |
| EcoO65I | GGTNACC | 1 cut(s) | 204 |
| EcoRV | GATATC | 1 cut(s) | 352 |
| FaeI | CATG | 1 cut(s) | 317 |
| FaiI | YATR | 6 cut(s) | 57, 88, 90, 231, 311, 315 |
| FatI | CATG | 1 cut(s) | 313 |
| FbaI | TGATCA | 1 cut(s) | 274 |
| FokI | GGATG | 1 cut(s) | 170 |
| FspBI | CTAG | 1 cut(s) | 255 |
| HaeIII | GGCC | 1 cut(s) | 85 |
| Hin1II | CATG | 1 cut(s) | 317 |
| HphI | GGTGA | 2 cut(s) | 206, 269 |
| Hpy188I | TCNGA | 2 cut(s) | 199, 356 |
| Hpy188III | TCNNGA | 1 cut(s) | 143 |
| HpyAV | CCTTC | 2 cut(s) | 237, 347 |
| HpyCH4V | TGCA | 1 cut(s) | 240 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 48 |
| HpyF3I | CTNAG | 1 cut(s) | 287 |
| Hsp92II | CATG | 1 cut(s) | 317 |
| Ksp22I | TGATCA | 1 cut(s) | 274 |
| Kzo9I | GATC | 3 cut(s) | 59, 199, 274 |
| LpnPI | CCDG | 2 cut(s) | 52, 332 |
| MaeI | CTAG | 1 cut(s) | 255 |
| MaeIII | GTNAC | 2 cut(s) | 179, 204 |
| MalI | GATC | 3 cut(s) | 61, 201, 276 |
| MboI | GATC | 3 cut(s) | 59, 199, 274 |
| MboII | GAAGA | 2 cut(s) | 116, 333 |
| MluCI | AATT | 2 cut(s) | 22, 210 |
| MnlI | CCTC | 7 cut(s) | 75, 135, 138, 141, 152, 205, 310 |
| MseI | TTAA | 2 cut(s) | 21, 120 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 48 |
| NdeII | GATC | 3 cut(s) | 59, 199, 274 |
| NlaIII | CATG | 1 cut(s) | 317 |
| NmeAIII | GCCGAG | 1 cut(s) | 105 |
| NmuCI | GTSAC | 1 cut(s) | 179 |
| PshBI | ATTAAT | 1 cut(s) | 120 |
| PspEI | GGTNACC | 1 cut(s) | 204 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| SaqAI | TTAA | 2 cut(s) | 21, 120 |
| Sau3AI | GATC | 3 cut(s) | 59, 199, 274 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 2 cut(s) | 69, 288 |
| SgeI | CNNG | 7 cut(s) | 51, 93, 155, 170, 201, 267, 326 |
| SinI | GGWCC | 1 cut(s) | 67 |
| Sse9I | AATT | 2 cut(s) | 22, 210 |
| SsiI | CCGC | 1 cut(s) | 77 |
| SspMI | CTAG | 1 cut(s) | 255 |
| TaqI | TCGA | 2 cut(s) | 157, 343 |
| TasI | AATT | 2 cut(s) | 22, 210 |
| Tru1I | TTAA | 2 cut(s) | 21, 120 |
| Tru9I | TTAA | 2 cut(s) | 21, 120 |
| TscAI | CASTG | 1 cut(s) | 307 |
| TseFI | GTSAC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 3 cut(s) | 17, 22, 329 |
| TspRI | CASTG | 1 cut(s) | 307 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| VspI | ATTAAT | 1 cut(s) | 120 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 53 |
| XspI | CTAG | 1 cut(s) | 255 |